AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014239

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014239.t1 MTR_3g117420 95.198 354 16 1 5 358 2 354 0.0 698
MS.gene014239.t1 MTR_8g074050 76.136 352 83 1 7 358 4 354 0.0 572
MS.gene014239.t1 MTR_8g074070 75.568 352 85 1 7 358 4 354 0.0 563
MS.gene014239.t1 MTR_8g074070 71.875 352 79 2 7 358 4 335 0.0 526
MS.gene014239.t1 MTR_3g117485 67.622 349 105 5 14 358 9 353 8.31e-167 469
MS.gene014239.t1 MTR_3g117485 68.705 278 83 3 83 358 6 281 2.09e-138 395
MS.gene014239.t1 MTR_4g116010 51.453 344 156 5 16 358 15 348 8.19e-122 355
MS.gene014239.t1 MTR_4g115990 46.624 311 139 4 40 350 36 319 2.49e-91 276
MS.gene014239.t1 MTR_3g026150 41.441 333 188 4 13 343 19 346 2.04e-86 265
MS.gene014239.t1 MTR_2g437380 39.776 357 202 7 8 358 7 356 2.71e-80 249
MS.gene014239.t1 MTR_5g055900 38.372 344 203 4 17 358 12 348 2.05e-79 247
MS.gene014239.t1 MTR_2g072910 39.535 344 201 3 17 358 16 354 4.70e-79 246
MS.gene014239.t1 MTR_7g062580 40.129 309 175 5 30 336 32 332 1.10e-77 243
MS.gene014239.t1 MTR_5g055680 40.523 306 177 3 55 358 46 348 1.36e-77 242
MS.gene014239.t1 MTR_5g048470 38.889 306 183 3 55 358 52 355 2.81e-77 242
MS.gene014239.t1 MTR_2g072890 38.554 332 194 5 17 346 16 339 1.10e-76 240
MS.gene014239.t1 MTR_5g055820 39.016 305 182 2 56 358 47 349 1.38e-76 240
MS.gene014239.t1 MTR_5g048570 36.047 344 209 4 17 358 12 346 1.41e-76 240
MS.gene014239.t1 MTR_8g064200 38.235 306 185 3 55 358 51 354 1.07e-75 238
MS.gene014239.t1 MTR_8g064200 38.235 306 185 3 55 358 56 359 1.16e-75 238
MS.gene014239.t1 MTR_7g062550 38.507 335 190 8 30 358 37 361 3.76e-74 234
MS.gene014239.t1 MTR_0009s0050 36.812 345 207 5 17 358 12 348 4.19e-74 234
MS.gene014239.t1 MTR_0009s0050 36.812 345 207 5 17 358 12 348 4.30e-74 233
MS.gene014239.t1 MTR_7g062570 38.206 301 177 4 56 355 55 347 2.23e-73 232
MS.gene014239.t1 MTR_5g048550 38.235 306 184 3 55 358 46 348 3.85e-73 231
MS.gene014239.t1 MTR_5g055690 35.211 355 220 5 7 358 2 349 1.21e-72 230
MS.gene014239.t1 MTR_5g048850 37.377 305 186 3 56 358 47 348 2.12e-72 229
MS.gene014239.t1 MTR_1g033810 39.583 288 172 2 55 342 46 331 1.17e-71 227
MS.gene014239.t1 MTR_7g062600 35.329 334 203 7 30 358 28 353 1.51e-71 227
MS.gene014239.t1 MTR_2g437380 43.726 263 144 3 99 358 1 262 1.55e-70 221
MS.gene014239.t1 MTR_7g063730 35.621 306 192 3 55 358 63 365 4.77e-70 223
MS.gene014239.t1 MTR_7g068650 37.809 283 172 2 54 332 52 334 4.15e-69 221
MS.gene014239.t1 MTR_0328s0030 36.103 349 212 5 13 358 6 346 7.76e-68 217
MS.gene014239.t1 MTR_3g026150 43.019 265 146 3 17 281 23 282 1.10e-67 214
MS.gene014239.t1 MTR_7g045650 41.975 243 138 2 51 293 55 294 1.64e-67 216
MS.gene014239.t1 MTR_4g015790 36.207 290 181 2 50 335 56 345 2.44e-67 216
MS.gene014239.t1 MTR_0009s0480 34.000 350 220 5 12 358 6 347 2.80e-67 216
MS.gene014239.t1 MTR_5g048740 36.656 311 193 2 50 358 39 347 3.71e-67 216
MS.gene014239.t1 MTR_5g082750 37.234 282 172 3 55 332 48 328 1.30e-64 209
MS.gene014239.t1 MTR_3g026150 41.841 239 136 2 107 343 6 243 1.47e-64 206
MS.gene014239.t1 MTR_2g072910 41.418 268 152 2 17 284 16 278 2.10e-64 206
MS.gene014239.t1 MTR_3g070860 36.014 286 180 2 50 332 44 329 3.11e-64 208
MS.gene014239.t1 MTR_5g059130 33.030 330 210 6 10 336 1 322 4.75e-64 207
MS.gene014239.t1 MTR_3g072820 35.473 296 180 6 52 343 38 326 5.46e-63 204
MS.gene014239.t1 MTR_5g011250 34.139 331 203 8 15 334 5 331 6.32e-62 202
MS.gene014239.t1 MTR_5g055800 34.426 305 194 4 56 358 47 347 2.35e-61 200
MS.gene014239.t1 MTR_3g092890 36.610 295 179 5 55 348 37 324 5.05e-61 199
MS.gene014239.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 2.86e-60 195
MS.gene014239.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 2.92e-60 194
MS.gene014239.t1 MTR_3g072810 34.409 279 176 5 74 348 53 328 5.53e-58 191
MS.gene014239.t1 MTR_5g048850 40.088 227 133 2 56 282 47 270 6.65e-58 189
MS.gene014239.t1 MTR_5g055690 40.351 228 132 3 55 281 46 270 4.98e-57 187
MS.gene014239.t1 MTR_5g059140 34.520 281 174 5 54 329 40 315 3.19e-56 187
MS.gene014239.t1 MTR_3g063180 35.370 311 187 8 56 355 42 349 1.01e-55 186
MS.gene014239.t1 MTR_7g062560 34.967 306 184 5 55 358 61 353 1.05e-54 183
MS.gene014239.t1 MTR_8g024120 34.237 295 188 6 56 349 42 331 1.50e-54 182
MS.gene014239.t1 MTR_1g062110 34.653 303 181 7 51 346 61 353 1.66e-54 183
MS.gene014239.t1 MTR_6g015950 34.286 315 188 8 44 351 27 329 5.96e-53 178
MS.gene014239.t1 MTR_2g102570 34.868 304 177 9 56 349 52 344 8.75e-53 179
MS.gene014239.t1 MTR_0056s0160 37.607 234 143 2 127 358 1 233 2.51e-52 173
MS.gene014239.t1 MTR_5g022020 32.099 324 209 7 22 342 9 324 1.73e-51 175
MS.gene014239.t1 MTR_3g058610 30.032 313 209 6 26 335 13 318 1.96e-51 175
MS.gene014239.t1 MTR_8g075890 33.103 290 187 6 56 342 39 324 2.29e-51 175
MS.gene014239.t1 MTR_2g025120 32.566 304 190 8 55 352 3 297 2.59e-51 173
MS.gene014239.t1 MTR_0009s0480 36.681 229 142 2 55 283 45 270 2.75e-51 172
MS.gene014239.t1 MTR_5g032870 34.967 306 186 8 56 353 38 338 5.71e-51 173
MS.gene014239.t1 MTR_7g102820 32.581 310 186 7 50 346 61 360 2.41e-50 172
MS.gene014239.t1 MTR_4g087140 35.880 301 170 9 56 336 26 323 4.49e-50 171
MS.gene014239.t1 MTR_5g065010 34.694 294 177 8 56 341 39 325 1.35e-49 169
MS.gene014239.t1 MTR_5g032880 35.526 304 187 7 56 353 376 676 1.95e-49 176
MS.gene014239.t1 MTR_5g032880 33.333 300 186 5 56 351 38 327 2.33e-46 167
MS.gene014239.t1 MTR_8g075830 32.069 290 190 6 56 342 39 324 2.70e-48 167
MS.gene014239.t1 MTR_3g088565 31.884 276 176 3 54 325 1 268 8.30e-48 164
MS.gene014239.t1 MTR_4g087110 36.120 299 167 9 56 334 26 320 1.23e-47 165
MS.gene014239.t1 MTR_3g091350 32.667 300 188 9 56 350 59 349 2.69e-47 164
MS.gene014239.t1 MTR_1g034060 33.333 303 174 8 55 334 25 322 9.76e-47 162
MS.gene014239.t1 MTR_1g034120 33.663 303 173 8 55 334 25 322 1.19e-46 162
MS.gene014239.t1 MTR_4g087120 35.548 301 170 9 56 336 26 322 1.61e-46 162
MS.gene014239.t1 MTR_3g083370 30.464 302 197 7 55 352 3 295 3.42e-46 160
MS.gene014239.t1 MTR_1g034140 35.374 294 167 8 56 334 27 312 1.77e-45 159
MS.gene014239.t1 MTR_7g081710 29.643 280 191 5 56 333 49 324 5.39e-45 158
MS.gene014239.t1 MTR_1g070135 30.508 295 197 7 56 348 38 326 7.48e-44 154
MS.gene014239.t1 MTR_1g070085 33.221 298 186 9 56 348 37 326 8.35e-44 154
MS.gene014239.t1 MTR_1g070085 33.221 298 186 9 56 348 37 326 8.35e-44 154
MS.gene014239.t1 MTR_4g093840 30.868 311 201 7 56 358 62 366 2.98e-43 154
MS.gene014239.t1 MTR_3g091360 31.379 290 186 8 56 340 52 333 3.87e-43 153
MS.gene014239.t1 MTR_1g093110 28.797 316 211 8 51 358 65 374 8.00e-43 152
MS.gene014239.t1 MTR_6g464620 29.814 322 197 7 53 355 61 372 1.06e-42 152
MS.gene014239.t1 MTR_1g062110 35.565 239 143 6 50 281 60 294 1.16e-42 151
MS.gene014239.t1 MTR_8g033380 30.351 313 204 7 54 355 52 361 1.73e-42 152
MS.gene014239.t1 MTR_5g085330 30.182 275 180 6 54 325 3 268 2.19e-42 150
MS.gene014239.t1 MTR_7g451860 31.068 309 188 8 48 351 33 321 2.21e-42 150
MS.gene014239.t1 MTR_7g047670 31.068 309 188 8 48 351 33 321 2.21e-42 150
MS.gene014239.t1 MTR_1g102070 30.159 315 205 7 53 355 56 367 8.13e-42 150
MS.gene014239.t1 MTR_1g048940 29.907 321 194 11 55 358 44 350 8.31e-42 149
MS.gene014239.t1 MTR_1g070120 29.492 295 200 7 56 348 38 326 1.01e-41 149
MS.gene014239.t1 MTR_7g102720 31.845 336 210 11 32 358 10 335 1.04e-41 149
MS.gene014239.t1 MTR_8g041620 31.741 293 184 7 50 333 62 347 1.31e-41 149
MS.gene014239.t1 MTR_8g062600 31.959 291 184 6 51 333 62 346 2.67e-41 149
MS.gene014239.t1 MTR_3g088745 31.511 311 191 8 30 328 17 317 4.68e-41 147
MS.gene014239.t1 MTR_2g069060 31.447 318 200 8 39 349 32 338 8.86e-41 147
MS.gene014239.t1 MTR_2g069300 30.233 301 190 7 56 347 54 343 1.26e-40 146
MS.gene014239.t1 MTR_4g087100 34.448 299 172 9 56 334 26 320 2.63e-40 145
MS.gene014239.t1 MTR_8g009110 31.410 312 199 9 56 358 60 365 2.73e-40 145
MS.gene014239.t1 MTR_8g009090 30.903 288 179 7 56 333 60 337 7.41e-40 144
MS.gene014239.t1 MTR_2g068950 32.168 286 182 6 50 331 57 334 9.31e-40 144
MS.gene014239.t1 MTR_2g025120 33.478 230 141 6 55 281 3 223 9.43e-40 140
MS.gene014239.t1 MTR_2g068840 30.794 315 198 9 56 358 55 361 1.03e-39 144
MS.gene014239.t1 MTR_8g041600 30.000 320 206 8 50 358 62 374 1.44e-39 144
MS.gene014239.t1 MTR_8g009080 31.410 312 201 7 54 358 92 397 1.82e-39 144
MS.gene014239.t1 MTR_2g069010 31.475 305 192 7 50 343 63 361 1.89e-39 144
MS.gene014239.t1 MTR_4g024660 32.950 261 167 5 50 308 61 315 1.94e-39 144
MS.gene014239.t1 MTR_2g083000 30.877 285 171 9 56 333 33 298 2.49e-39 142
MS.gene014239.t1 MTR_4g087090 30.976 297 182 8 56 335 30 320 2.61e-39 143
MS.gene014239.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 3.01e-39 143
MS.gene014239.t1 MTR_0009s0050 39.645 169 99 2 192 358 1 168 3.15e-39 137
MS.gene014239.t1 MTR_8g009160 29.524 315 200 8 56 358 60 364 3.64e-39 142
MS.gene014239.t1 MTR_2g069210 31.392 309 192 9 56 355 64 361 3.83e-39 143
MS.gene014239.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 4.18e-39 143
MS.gene014239.t1 MTR_1g070080 31.894 301 193 7 53 346 29 324 5.27e-39 142
MS.gene014239.t1 MTR_7g016090 31.343 268 178 5 84 349 63 326 1.09e-38 140
MS.gene014239.t1 MTR_7g016090 31.343 268 178 5 84 349 65 328 1.34e-38 140
MS.gene014239.t1 MTR_5g005570 30.719 306 182 9 52 351 33 314 1.54e-38 140
MS.gene014239.t1 MTR_2g068960 31.615 291 180 7 54 333 61 343 1.67e-38 141
MS.gene014239.t1 MTR_3g043900 30.086 349 228 7 14 358 17 353 2.55e-38 140
MS.gene014239.t1 MTR_2g069090 33.205 259 158 5 56 308 68 317 2.95e-38 140
MS.gene014239.t1 MTR_7g056347 29.283 321 203 8 52 358 63 373 3.13e-38 140
MS.gene014239.t1 MTR_1g093120 29.180 305 195 8 50 343 61 355 3.34e-38 140
MS.gene014239.t1 MTR_2g069190 31.359 287 178 7 56 333 68 344 8.57e-38 139
MS.gene014239.t1 MTR_8g028435 30.233 301 187 10 56 344 60 349 8.72e-38 139
MS.gene014239.t1 MTR_4g087130 33.779 299 177 9 56 336 26 321 1.51e-37 138
MS.gene014239.t1 MTR_3g045230 31.169 308 198 8 56 358 56 354 2.09e-37 138
MS.gene014239.t1 MTR_6g092620 29.348 276 181 5 54 324 1 267 2.63e-37 136
MS.gene014239.t1 MTR_7g016080 32.184 261 152 6 80 332 61 304 5.49e-37 136
MS.gene014239.t1 MTR_4g117880 30.293 307 191 9 56 351 60 354 5.84e-37 137
MS.gene014239.t1 MTR_1g070085 32.937 252 163 6 99 348 1 248 7.32e-37 134
MS.gene014239.t1 MTR_0009s0400 42.361 144 81 1 217 358 1 144 1.21e-36 130
MS.gene014239.t1 MTR_8g009170 29.747 316 200 9 56 358 60 366 1.29e-36 136
MS.gene014239.t1 MTR_1g093140 28.664 307 205 8 50 349 67 366 1.94e-36 135
MS.gene014239.t1 MTR_1g081840 30.000 300 189 7 44 328 41 334 1.97e-36 135
MS.gene014239.t1 MTR_1g043775 29.747 316 197 10 56 358 54 357 3.22e-36 135
MS.gene014239.t1 MTR_1g011580 32.841 271 163 7 56 324 63 316 4.15e-36 134
MS.gene014239.t1 MTR_8g461330 31.164 292 175 10 56 333 27 306 4.48e-36 134
MS.gene014239.t1 MTR_1g043810 30.363 303 189 9 56 348 54 344 7.12e-36 134
MS.gene014239.t1 MTR_8g008930 29.412 289 183 7 56 333 60 338 1.00e-35 134
MS.gene014239.t1 MTR_1g070100 32.927 246 159 6 105 348 3 244 1.05e-35 131
MS.gene014239.t1 MTR_8g063070 27.273 308 209 8 50 349 61 361 1.63e-35 133
MS.gene014239.t1 MTR_3g096500 29.393 313 204 8 50 351 60 366 1.82e-35 133
MS.gene014239.t1 MTR_7g029655 30.492 305 191 11 49 342 60 354 3.23e-35 132
MS.gene014239.t1 MTR_8g093930 27.414 321 212 8 22 332 19 328 4.16e-35 132
MS.gene014239.t1 MTR_1g070185 29.097 299 196 8 50 342 63 351 5.08e-35 132
MS.gene014239.t1 MTR_2g083030 30.000 320 188 11 29 333 5 303 1.11e-34 130
MS.gene014239.t1 MTR_7g105070 30.345 290 189 7 50 333 53 335 2.99e-34 129
MS.gene014239.t1 MTR_3g083370 29.661 236 154 6 55 287 3 229 5.28e-34 125
MS.gene014239.t1 MTR_8g469400 30.952 294 176 8 50 335 61 335 7.84e-34 128
MS.gene014239.t1 MTR_0032s0040 28.571 294 193 9 50 335 64 348 8.63e-34 129
MS.gene014239.t1 MTR_1g043760 30.116 259 164 7 56 308 54 301 1.11e-33 128
MS.gene014239.t1 MTR_1g032250 32.333 300 190 8 56 350 73 364 1.82e-33 127
MS.gene014239.t1 MTR_3g040410 32.226 301 179 12 56 348 6 289 3.51e-33 125
MS.gene014239.t1 MTR_1g032140 31.126 302 191 9 56 350 66 357 3.76e-33 127
MS.gene014239.t1 MTR_4g074130 29.389 262 175 8 53 311 37 291 6.83e-33 125
MS.gene014239.t1 MTR_8g093980 29.154 319 207 9 50 358 53 362 1.04e-32 125
MS.gene014239.t1 MTR_8g041600 30.645 248 160 6 50 292 62 302 1.07e-32 124
MS.gene014239.t1 MTR_7g056393 30.769 312 193 8 50 349 61 361 3.26e-32 124
MS.gene014239.t1 MTR_7g056353 29.496 278 174 6 92 357 79 346 4.41e-32 126
MS.gene014239.t1 MTR_1g032220 30.333 300 196 8 56 350 73 364 6.89e-32 123
MS.gene014239.t1 MTR_2g070870 29.787 282 178 9 56 330 28 296 1.54e-31 121
MS.gene014239.t1 MTR_2g069060 31.092 238 148 6 50 281 21 248 3.03e-31 119
MS.gene014239.t1 MTR_7g078010 28.115 313 202 8 50 350 61 362 3.60e-31 121
MS.gene014239.t1 MTR_4g119410 29.355 310 196 9 52 349 63 361 1.05e-30 120
MS.gene014239.t1 MTR_1g070135 30.263 228 152 6 56 281 38 260 1.16e-30 118
MS.gene014239.t1 MTR_2g019370 28.523 298 189 10 49 333 20 306 1.16e-30 119
MS.gene014239.t1 MTR_4g011690 30.392 306 193 12 56 351 9 304 1.65e-30 118
MS.gene014239.t1 MTR_8g006930 28.438 320 211 9 50 358 61 373 4.73e-30 118
MS.gene014239.t1 MTR_1g043770 28.897 263 170 6 52 308 49 300 6.22e-30 117
MS.gene014239.t1 MTR_8g009080 31.441 229 149 5 54 280 92 314 9.74e-30 117
MS.gene014239.t1 MTR_8g009080 31.858 226 146 5 54 277 92 311 1.88e-29 116
MS.gene014239.t1 MTR_1g043775 31.034 232 142 7 56 280 54 274 5.78e-29 114
MS.gene014239.t1 MTR_4g132770 40.517 116 69 0 209 324 21 136 1.49e-28 109
MS.gene014239.t1 MTR_1g043810 31.034 232 142 7 56 280 54 274 1.07e-27 111
MS.gene014239.t1 MTR_4g123020 29.276 304 181 11 45 334 12 295 1.20e-27 110
MS.gene014239.t1 MTR_2g072930 38.411 151 89 1 17 167 16 162 1.58e-27 107
MS.gene014239.t1 MTR_3g108520 30.195 308 193 13 52 344 3 303 2.53e-27 110
MS.gene014239.t1 MTR_8g009120 27.331 311 201 8 56 358 60 353 3.82e-27 110
MS.gene014239.t1 MTR_3g117430 52.294 109 15 2 250 358 58 129 1.52e-26 102
MS.gene014239.t1 MTR_3g117430 60.000 70 11 1 105 174 5 57 3.52e-19 82.8
MS.gene014239.t1 MTR_8g009170 29.310 232 148 6 56 280 60 282 1.57e-26 107
MS.gene014239.t1 MTR_4g021360 28.667 300 204 9 53 345 4 300 2.71e-26 107
MS.gene014239.t1 MTR_1g027290 28.939 311 184 12 52 344 25 316 3.07e-26 107
MS.gene014239.t1 MTR_6g088665 30.195 308 183 12 57 335 11 315 4.47e-26 107
MS.gene014239.t1 MTR_8g030880 29.514 288 183 10 56 334 10 286 1.02e-25 105
MS.gene014239.t1 MTR_6g088665 30.097 309 183 12 57 335 11 316 1.06e-25 105
MS.gene014239.t1 MTR_8g009150 25.641 312 197 8 56 358 60 345 1.74e-25 105
MS.gene014239.t1 MTR_3g464530 28.571 266 163 6 56 311 34 282 4.40e-25 103
MS.gene014239.t1 MTR_4g011720 28.754 313 204 12 48 351 1 303 6.29e-25 103
MS.gene014239.t1 MTR_7g078010 29.960 247 155 7 50 288 61 297 5.22e-24 100
MS.gene014239.t1 MTR_4g100600 28.000 325 210 13 48 356 1 317 8.45e-24 100
MS.gene014239.t1 MTR_1g043770 27.778 234 154 5 52 280 49 272 9.03e-24 100
MS.gene014239.t1 MTR_7g090520 27.273 308 196 11 56 350 10 302 2.00e-23 99.4
MS.gene014239.t1 MTR_4g021380 27.885 312 210 9 51 351 2 309 2.79e-23 99.0
MS.gene014239.t1 MTR_2g068800 27.778 252 149 8 56 299 55 281 8.34e-23 97.1
MS.gene014239.t1 MTR_1g027310 27.431 288 158 8 52 332 45 288 1.27e-22 97.1
MS.gene014239.t1 MTR_7g077670 27.974 311 201 12 50 351 5 301 2.07e-22 96.7
MS.gene014239.t1 MTR_1g070110 29.237 236 131 6 99 331 4 206 3.58e-22 94.0
MS.gene014239.t1 MTR_2g033270 29.630 270 160 10 80 334 38 292 1.67e-21 94.0
MS.gene014239.t1 MTR_4g096840 25.769 260 178 10 79 328 45 299 2.83e-21 93.6
MS.gene014239.t1 MTR_8g009180 30.220 182 120 4 166 342 99 278 8.43e-21 91.7
MS.gene014239.t1 MTR_4g100590 27.152 302 197 11 48 337 1 291 1.04e-20 91.7
MS.gene014239.t1 MTR_1g086550 25.503 298 193 9 56 334 20 307 2.10e-20 91.3
MS.gene014239.t1 MTR_8g102600 28.082 292 186 11 77 348 29 316 9.41e-20 89.4
MS.gene014239.t1 MTR_3g464530 28.390 236 142 6 56 281 34 252 2.93e-19 86.3
MS.gene014239.t1 MTR_5g025090 27.208 283 186 6 56 334 5 271 3.96e-19 87.0
MS.gene014239.t1 MTR_5g027230 27.402 281 188 5 56 334 6 272 6.01e-19 86.7
MS.gene014239.t1 MTR_4g094900 29.661 236 140 8 56 267 8 241 6.65e-19 85.5
MS.gene014239.t1 MTR_0009s0410 30.864 162 104 3 11 171 5 159 3.05e-18 81.6
MS.gene014239.t1 MTR_1g043840 31.847 157 97 5 153 308 37 184 2.27e-16 79.7
MS.gene014239.t1 MTR_5g025060 25.704 284 172 6 52 334 2 247 5.37e-16 77.8
MS.gene014239.t1 MTR_4g100590 29.084 251 159 10 99 337 1 244 8.32e-16 77.0
MS.gene014239.t1 MTR_8g102600 27.778 270 171 11 99 348 1 266 2.14e-15 75.9
MS.gene014239.t1 MTR_1g011600 28.249 177 122 4 162 335 121 295 6.42e-15 74.7
MS.gene014239.t1 MTR_6g035160 33.088 136 86 4 217 348 35 169 8.04e-15 72.4
MS.gene014239.t1 MTR_5g024940 26.502 283 169 7 56 334 6 253 1.01e-14 73.9
MS.gene014239.t1 MTR_1g032240 34.211 114 64 3 204 316 48 151 3.05e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014239.t1 AT5G20400 55.233 344 151 3 16 358 7 348 1.97e-136 392
MS.gene014239.t1 AT1G49390 53.488 344 157 3 16 358 7 348 2.16e-135 390
MS.gene014239.t1 AT5G20550 57.980 307 127 2 54 358 43 349 8.75e-132 380
MS.gene014239.t1 AT5G54000 51.297 347 161 5 16 358 7 349 3.20e-126 366
MS.gene014239.t1 AT1G49390 57.993 269 113 0 90 358 1 269 1.63e-119 346
MS.gene014239.t1 AT5G54000 54.647 269 122 0 90 358 1 269 1.55e-111 326
MS.gene014239.t1 AT3G21420 43.966 348 186 6 18 358 17 362 2.54e-87 268
MS.gene014239.t1 AT1G17020 36.011 361 222 5 3 358 2 358 3.57e-77 241
MS.gene014239.t1 AT4G25300 39.677 310 177 3 55 358 51 356 3.25e-76 239
MS.gene014239.t1 AT1G78550 39.557 316 188 2 45 358 42 356 2.90e-75 236
MS.gene014239.t1 AT2G38240 36.232 345 207 5 17 355 11 348 9.37e-75 235
MS.gene014239.t1 AT1G17010 37.377 305 189 1 56 358 54 358 8.51e-73 230
MS.gene014239.t1 AT4G25310 38.746 351 194 7 17 358 15 353 3.08e-72 229
MS.gene014239.t1 AT5G05600 36.688 308 186 4 55 355 61 366 7.61e-69 221
MS.gene014239.t1 AT1G78550 39.286 280 165 3 81 358 2 278 1.28e-65 209
MS.gene014239.t1 AT3G11180 37.370 289 176 3 49 335 88 373 1.58e-64 210
MS.gene014239.t1 AT3G11180 37.370 289 176 3 49 335 88 373 1.65e-64 210
MS.gene014239.t1 AT3G55970 35.762 302 186 5 56 351 52 351 8.37e-63 204
MS.gene014239.t1 AT5G08640 36.396 283 170 5 56 334 43 319 1.97e-60 197
MS.gene014239.t1 AT5G08640 36.396 283 170 5 56 334 43 319 1.97e-60 197
MS.gene014239.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.78e-59 196
MS.gene014239.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.78e-59 196
MS.gene014239.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.78e-59 196
MS.gene014239.t1 AT4G16330 36.156 307 177 8 56 355 67 361 8.89e-58 192
MS.gene014239.t1 AT4G10500 35.495 293 179 8 56 343 44 331 7.69e-56 186
MS.gene014239.t1 AT2G36690 33.531 337 210 8 16 348 19 345 5.11e-55 184
MS.gene014239.t1 AT2G36690 33.531 337 210 8 16 348 19 345 5.11e-55 184
MS.gene014239.t1 AT3G19010 37.377 305 171 9 47 336 20 319 8.81e-55 183
MS.gene014239.t1 AT3G19010 37.377 305 171 9 47 336 20 319 8.81e-55 183
MS.gene014239.t1 AT5G24530 33.634 333 187 9 37 348 4 323 4.47e-54 181
MS.gene014239.t1 AT5G05600 36.522 230 143 2 55 281 61 290 9.66e-53 176
MS.gene014239.t1 AT4G25310 35.159 347 184 8 17 358 15 325 2.31e-52 176
MS.gene014239.t1 AT3G60290 35.135 296 178 7 44 332 38 326 2.47e-52 177
MS.gene014239.t1 AT2G44800 35.125 279 169 6 52 325 48 319 4.70e-51 174
MS.gene014239.t1 AT1G55290 34.713 314 188 9 52 358 58 361 2.68e-50 172
MS.gene014239.t1 AT4G16330 36.782 261 152 7 102 355 1 255 2.59e-49 166
MS.gene014239.t1 AT1G62380 31.148 305 198 6 51 352 2 297 3.46e-49 168
MS.gene014239.t1 AT3G13610 34.069 317 190 10 50 358 56 361 4.01e-49 169
MS.gene014239.t1 AT4G10490 33.333 297 184 9 56 348 42 328 7.51e-49 168
MS.gene014239.t1 AT1G12010 31.511 311 200 7 51 357 2 303 1.24e-48 166
MS.gene014239.t1 AT5G07200 34.035 285 176 5 54 328 56 338 4.84e-48 167
MS.gene014239.t1 AT1G15550 33.333 312 192 7 30 335 31 332 5.58e-48 166
MS.gene014239.t1 AT5G63590 32.660 297 180 7 52 336 10 298 8.70e-48 164
MS.gene014239.t1 AT3G55970 34.632 231 146 3 56 281 52 282 2.40e-47 162
MS.gene014239.t1 AT5G63600 30.137 292 192 6 52 340 29 311 1.95e-46 161
MS.gene014239.t1 AT3G19010 34.426 305 150 9 47 336 20 289 2.46e-46 160
MS.gene014239.t1 AT1G05010 33.333 273 169 6 56 324 4 267 3.25e-46 160
MS.gene014239.t1 AT3G51240 31.959 291 189 8 56 342 38 323 4.44e-46 161
MS.gene014239.t1 AT1G60980 32.979 282 175 5 54 323 55 334 6.97e-46 161
MS.gene014239.t1 AT1G77330 33.574 277 162 7 54 320 1 265 1.34e-45 158
MS.gene014239.t1 AT5G63600 30.034 293 192 7 52 340 29 312 2.04e-45 158
MS.gene014239.t1 AT5G07480 30.031 323 194 9 56 358 44 354 6.26e-45 158
MS.gene014239.t1 AT1G44090 31.949 313 202 6 47 351 54 363 9.77e-45 158
MS.gene014239.t1 AT3G19000 35.714 294 169 8 56 333 32 321 3.41e-44 155
MS.gene014239.t1 AT4G21200 31.475 305 184 7 29 318 3 297 2.92e-43 153
MS.gene014239.t1 AT5G63595 31.679 262 151 5 52 311 21 256 2.99e-43 151
MS.gene014239.t1 AT4G25420 31.206 282 184 4 53 326 58 337 4.12e-43 154
MS.gene014239.t1 AT5G51810 30.662 287 187 4 53 332 60 341 6.43e-42 150
MS.gene014239.t1 AT1G80340 31.098 328 202 9 30 348 28 340 2.14e-41 148
MS.gene014239.t1 AT3G19010 37.450 251 137 9 47 282 20 265 3.97e-41 146
MS.gene014239.t1 AT1G80330 29.355 310 197 10 56 353 49 348 5.42e-41 147
MS.gene014239.t1 AT1G06620 33.459 266 161 6 49 308 55 310 6.17e-41 147
MS.gene014239.t1 AT5G43450 32.576 264 162 6 50 308 55 307 1.05e-40 147
MS.gene014239.t1 AT5G43935 31.206 282 157 8 56 329 19 271 1.05e-40 145
MS.gene014239.t1 AT5G43440 29.338 317 203 8 53 358 59 365 4.16e-40 145
MS.gene014239.t1 AT5G63580 33.898 236 146 5 49 281 12 240 4.52e-40 142
MS.gene014239.t1 AT4G25300 38.462 195 110 3 170 358 72 262 5.43e-40 142
MS.gene014239.t1 AT5G63580 34.188 234 144 5 49 279 12 238 6.52e-40 142
MS.gene014239.t1 AT5G59530 30.094 319 207 8 50 358 52 364 2.00e-39 143
MS.gene014239.t1 AT1G78440 31.034 290 174 9 56 332 18 294 3.78e-39 142
MS.gene014239.t1 AT2G30830 32.069 290 183 8 51 333 49 331 1.26e-38 141
MS.gene014239.t1 AT3G51240 32.083 240 157 5 105 342 4 239 1.63e-38 139
MS.gene014239.t1 AT1G06645 30.945 307 190 10 49 342 66 363 8.61e-38 139
MS.gene014239.t1 AT5G59540 28.852 305 200 8 50 344 55 352 1.10e-37 139
MS.gene014239.t1 AT3G12900 28.758 306 202 10 59 357 59 355 2.26e-37 138
MS.gene014239.t1 AT1G04380 31.679 262 162 6 52 308 41 290 2.31e-37 137
MS.gene014239.t1 AT3G61400 31.560 282 180 7 69 342 79 355 2.43e-37 138
MS.gene014239.t1 AT1G06640 29.904 311 191 10 49 342 53 353 3.79e-36 135
MS.gene014239.t1 AT1G03410 31.525 295 183 9 49 333 50 335 1.47e-35 133
MS.gene014239.t1 AT5G12270 29.022 317 198 8 56 358 56 359 1.98e-35 132
MS.gene014239.t1 AT1G03410 31.525 295 183 9 49 333 87 372 2.46e-35 133
MS.gene014239.t1 AT3G19000 35.950 242 135 8 56 281 32 269 3.63e-35 130
MS.gene014239.t1 AT2G19590 29.470 302 190 10 47 342 2 286 9.79e-35 130
MS.gene014239.t1 AT2G30840 30.855 269 175 7 47 310 48 310 1.68e-34 130
MS.gene014239.t1 AT5G07480 32.287 223 137 6 147 358 26 245 1.78e-34 127
MS.gene014239.t1 AT1G04350 28.972 321 204 10 50 358 52 360 1.85e-34 130
MS.gene014239.t1 AT1G06620 32.773 238 144 6 49 280 55 282 2.75e-34 128
MS.gene014239.t1 AT1G06650 30.000 300 187 10 56 342 64 353 4.77e-34 129
MS.gene014239.t1 AT5G43450 31.780 236 145 6 50 280 55 279 1.06e-33 126
MS.gene014239.t1 AT5G43440 30.085 236 151 5 53 283 59 285 1.02e-32 124
MS.gene014239.t1 AT4G25420 30.380 237 155 4 53 281 58 292 7.01e-32 122
MS.gene014239.t1 AT3G49620 29.795 292 172 6 56 321 34 318 1.14e-31 122
MS.gene014239.t1 AT2G25450 28.767 292 195 7 49 333 48 333 1.39e-31 122
MS.gene014239.t1 AT4G21690 28.041 296 192 5 49 333 40 325 3.04e-31 121
MS.gene014239.t1 AT1G04380 30.802 237 147 6 52 283 41 265 5.91e-31 119
MS.gene014239.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.25e-31 120
MS.gene014239.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.25e-31 120
MS.gene014239.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.25e-31 120
MS.gene014239.t1 AT2G30840 30.112 269 171 8 47 310 48 304 9.71e-31 120
MS.gene014239.t1 AT1G03400 29.655 290 186 7 49 333 49 325 4.63e-30 118
MS.gene014239.t1 AT1G06640 31.250 240 144 7 49 277 53 282 8.66e-30 116
MS.gene014239.t1 AT5G51810 29.289 239 157 4 53 284 60 293 1.27e-29 115
MS.gene014239.t1 AT1G06640 30.603 232 144 6 56 280 64 285 1.66e-29 116
MS.gene014239.t1 AT3G61400 32.093 215 139 4 69 281 79 288 1.89e-29 115
MS.gene014239.t1 AT1G52820 29.412 323 211 10 41 357 1 312 2.76e-29 115
MS.gene014239.t1 AT5G59540 28.692 237 157 6 50 281 55 284 3.33e-29 114
MS.gene014239.t1 AT2G19590 30.153 262 161 9 87 342 26 271 3.50e-29 114
MS.gene014239.t1 AT3G49630 28.671 286 183 5 56 321 9 293 4.82e-29 115
MS.gene014239.t1 AT1G50960 27.407 270 184 6 52 317 36 297 7.84e-29 114
MS.gene014239.t1 AT3G49630 28.938 273 182 4 60 321 18 289 2.08e-28 113
MS.gene014239.t1 AT1G06650 30.252 238 149 7 56 286 64 291 5.65e-28 111
MS.gene014239.t1 AT1G30040 26.871 294 196 8 48 333 23 305 9.12e-28 111
MS.gene014239.t1 AT2G30840 28.992 238 159 6 47 280 48 279 4.70e-27 108
MS.gene014239.t1 AT3G46500 28.966 290 175 12 58 319 11 297 5.03e-26 106
MS.gene014239.t1 AT3G46500 29.412 272 171 11 58 311 11 279 6.99e-25 103
MS.gene014239.t1 AT1G03400 27.044 318 186 8 49 333 49 353 1.07e-24 103
MS.gene014239.t1 AT2G34555 28.070 285 185 10 56 332 27 299 2.95e-24 102
MS.gene014239.t1 AT1G14130 27.740 292 181 6 56 337 9 280 4.85e-24 100
MS.gene014239.t1 AT1G47990 29.293 297 178 12 53 333 12 292 2.01e-22 96.7
MS.gene014239.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene014239.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene014239.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene014239.t1 AT5G51310 29.642 307 175 15 54 336 3 292 2.43e-21 93.6
MS.gene014239.t1 AT3G47190 25.152 330 201 11 24 336 3 303 3.46e-21 93.2
MS.gene014239.t1 AT1G52800 25.402 311 198 10 56 350 10 302 8.61e-21 92.0
MS.gene014239.t1 AT4G03070 28.049 328 204 17 47 358 5 316 1.51e-20 91.3
MS.gene014239.t1 AT1G28030 26.433 314 214 10 50 353 7 313 4.55e-20 90.1
MS.gene014239.t1 AT5G58660 26.460 291 180 8 53 318 31 312 6.26e-20 90.1
MS.gene014239.t1 AT3G50210 29.878 164 110 2 163 321 52 215 1.84e-19 87.0
MS.gene014239.t1 AT1G02400 25.342 292 201 9 50 332 18 301 4.81e-19 87.0
MS.gene014239.t1 AT3G46490 26.370 292 187 11 48 314 1 289 5.36e-19 87.0
MS.gene014239.t1 AT3G46490 26.573 286 182 11 48 308 1 283 1.64e-18 85.5
MS.gene014239.t1 AT3G49630 30.000 160 110 2 163 321 62 220 2.60e-18 84.0
MS.gene014239.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.88e-18 82.8
MS.gene014239.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.88e-18 82.8
MS.gene014239.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.88e-18 82.8
MS.gene014239.t1 AT1G30040 25.207 242 162 8 48 281 23 253 1.31e-17 82.0
MS.gene014239.t1 AT4G16765 32.796 186 113 6 157 332 44 227 1.74e-17 81.3
MS.gene014239.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.46e-17 80.5
MS.gene014239.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.46e-17 80.5
MS.gene014239.t1 AT1G35190 28.929 280 177 9 77 336 29 306 4.64e-17 81.6
MS.gene014239.t1 AT4G23340 27.358 318 193 14 51 350 5 302 1.11e-16 80.5
MS.gene014239.t1 AT1G35190 27.957 279 158 10 77 336 29 283 2.35e-16 79.3
MS.gene014239.t1 AT3G46500 29.630 189 118 8 136 311 19 205 2.42e-16 77.8
MS.gene014239.t1 AT3G46500 31.902 163 92 6 174 319 1 161 8.65e-16 75.5
MS.gene014239.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.79e-15 74.3
MS.gene014239.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.79e-15 74.3
MS.gene014239.t1 AT4G22870 34.884 86 55 1 250 334 2 87 8.44e-14 67.4
MS.gene014239.t1 AT3G46480 30.172 232 127 11 106 316 37 254 1.56e-13 70.5
MS.gene014239.t1 AT4G16765 35.455 110 64 3 231 335 77 184 5.99e-13 67.4
MS.gene014239.t1 AT4G16765 33.099 142 84 5 157 288 44 184 3.98e-12 64.7
MS.gene014239.t1 AT3G46500 28.916 166 104 7 136 288 19 183 5.59e-12 64.3
MS.gene014239.t1 AT4G03050 32.031 128 82 5 227 351 271 396 6.13e-12 67.0
MS.gene014239.t1 AT4G03050 32.031 128 82 5 227 351 271 396 6.13e-12 67.0
MS.gene014239.t1 AT4G23340 33.813 139 86 4 217 350 47 184 1.02e-11 63.9
MS.gene014239.t1 AT1G02400 23.438 256 180 8 50 297 18 265 2.45e-11 63.9
MS.gene014239.t1 AT3G46500 25.871 201 112 9 136 319 19 199 3.65e-11 62.8
MS.gene014239.t1 AT4G22870 33.333 78 51 1 258 334 51 128 8.39e-11 60.1

Find 74 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 3.3:+95367543 MS.gene014239:CDS
TTAATCTCTTGTTCTGAATC+TGG 0.210279 3.3:-95370829 None:intergenic
ACATAACTATGATTAAATTT+TGG 0.220701 3.3:-95370965 None:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 3.3:+95369936 MS.gene014239:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 3.3:-95367388 None:intergenic
AATATTACCAACAGGGAAAA+AGG 0.234600 3.3:+95370929 MS.gene014239:CDS
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 3.3:+95367530 MS.gene014239:CDS
AATTATATCTACAATGAATT+AGG 0.265397 3.3:+95367394 MS.gene014239:CDS
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 3.3:+95369462 MS.gene014239:CDS
TTGAAATTCCTCTGATCTTC+CGG 0.295977 3.3:-95369512 None:intergenic
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 3.3:+95367531 MS.gene014239:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 3.3:+95370082 MS.gene014239:CDS
TTCACTGGTCTGTATAATAT+TGG 0.322104 3.3:-95370883 None:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.323173 3.3:-95370021 None:intergenic
GAATTTATACCTGAAATCAT+TGG 0.353550 3.3:-95369552 None:intergenic
ATCAGAGGAATTTCAAACTT+TGG 0.357694 3.3:+95369519 MS.gene014239:CDS
ACGAGAGCATCAGGGATTAT+TGG 0.359276 3.3:-95370205 None:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 3.3:-95370214 None:intergenic
CCAAACGGTATTGAAGGATA+TGG 0.374061 3.3:+95369422 MS.gene014239:CDS
TAATCTCTTGTTCTGAATCT+GGG 0.407176 3.3:-95370828 None:intergenic
GATGGCAGAATCGGTGGGTT+CGG 0.415598 3.3:+95367300 None:intergenic
AGTAGTGATAAATGAAGAAA+AGG 0.420128 3.3:+95370777 MS.gene014239:CDS
CCATATCCTTCAATACCGTT+TGG 0.420764 3.3:-95369422 None:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 3.3:+95367319 MS.gene014239:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 3.3:-95369551 None:intergenic
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 3.3:-95367499 None:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 3.3:+95367532 MS.gene014239:CDS
TACAATGAATTAGGTGGTGT+TGG 0.450827 3.3:+95367403 MS.gene014239:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 3.3:-95367469 None:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 3.3:+95370145 MS.gene014239:CDS
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 3.3:+95370006 MS.gene014239:CDS
TTTATCACTACTCTGTGTAC+TGG 0.484624 3.3:-95370766 None:intergenic
TTCTCCATCTACAGCACAGC+AGG 0.485461 3.3:+95367495 MS.gene014239:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 3.3:+95369985 MS.gene014239:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 3.3:+95369493 MS.gene014239:CDS
AGGGAGCCAAACGGTATTGA+AGG 0.498045 3.3:+95369416 MS.gene014239:CDS
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 3.3:+95367306 MS.gene014239:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 3.3:+95369484 MS.gene014239:CDS
CTACTCTGTGTACTGGACTC+TGG 0.522493 3.3:-95370759 None:intergenic
TTTACGCCTAGAACATGATC+AGG 0.523560 3.3:-95370088 None:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 3.3:+95369949 MS.gene014239:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 3.3:-95367485 None:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 3.3:+95367348 MS.gene014239:CDS
GGCGTAAAGCCACATGCTGA+TGG 0.536648 3.3:+95370103 MS.gene014239:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 3.3:+95369373 MS.gene014239:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 3.3:+95369339 MS.gene014239:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 3.3:+95369991 MS.gene014239:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 3.3:+95367294 None:intergenic
TAATGTTGGTGATCAAATAG+AGG 0.552527 3.3:+95370231 MS.gene014239:CDS
TTGTAGATATAATTATTTGG+TGG 0.579722 3.3:-95367385 None:intergenic
CCGTCCACTAGTCTGTCGAC+TGG 0.584898 3.3:-95370853 None:intergenic
CAGTCGACAGACTAGTGGAC+GGG 0.592554 3.3:+95370854 MS.gene014239:CDS
ACATGATCAGGCATAGGACA+TGG 0.597433 3.3:-95370076 None:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 3.3:+95367397 MS.gene014239:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 3.3:+95367295 None:intergenic
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 3.3:+95369340 MS.gene014239:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 3.3:+95370217 MS.gene014239:CDS
AAGTGCTAAAAGATAATCAG+TGG 0.615774 3.3:+95370173 MS.gene014239:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 3.3:+95369407 MS.gene014239:CDS
TGATAAATGAAGAAAAGGAA+AGG 0.617930 3.3:+95370782 MS.gene014239:CDS
GAGACAAGCTTGTCATACCA+TGG 0.626742 3.3:-95369325 None:intergenic
GATTGCTTCCTAAAGGAATG+TGG 0.631118 3.3:+95370013 MS.gene014239:CDS
AGGTACATCCGGAAGATCAG+AGG 0.633070 3.3:+95369504 MS.gene014239:CDS
GTGATTTAGGCAATAAACCA+TGG 0.634072 3.3:+95369308 MS.gene014239:intron
CCTAGAACATGATCAGGCAT+AGG 0.638733 3.3:-95370082 None:intergenic
GTTACACAGATAATGAGCAA+TGG 0.639099 3.3:+95370730 MS.gene014239:intron
TAAACCAGTCGACAGACTAG+TGG 0.643978 3.3:+95370849 MS.gene014239:CDS
CATTAATCACGAGAGCATCA+GGG 0.648254 3.3:-95370213 None:intergenic
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 3.3:-95367531 None:intergenic
CCAGTCGACAGACTAGTGGA+CGG 0.661367 3.3:+95370853 MS.gene014239:CDS
ATAGATGATCCATCAGCATG+TGG 0.675560 3.3:-95370112 None:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 3.3:-95367445 None:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 3.3:-95370072 None:intergenic
TGATCAGGCATAGGACATGG+AGG 0.683082 3.3:-95370073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATATTCATTGTTAA+TGG - chr3.3:95369595-95369614 None:intergenic 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - chr3.3:95369594-95369613 None:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + chr3.3:95367394-95367413 MS.gene014239:CDS 15.0%
!! TCATTGTAGATATAATTATT+TGG - chr3.3:95367391-95367410 None:intergenic 15.0%
!! TTAAATCAATAAATCATAAC+AGG - chr3.3:95369105-95369124 None:intergenic 15.0%
!! TTGAATGTAAATATTAGATA+TGG + chr3.3:95369193-95369212 MS.gene014239:intron 15.0%
!! TTGATTTAAATTAGAGAATA+CGG + chr3.3:95369116-95369135 MS.gene014239:intron 15.0%
!! TTTAATAATATTTGCAGATT+CGG - chr3.3:95368040-95368059 None:intergenic 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - chr3.3:95367873-95367892 None:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - chr3.3:95367874-95367893 None:intergenic 15.0%
!! AAATAGAAAATATTAGCAGT+TGG - chr3.3:95367591-95367610 None:intergenic 20.0%
!! AACAAAAATAGTAGATTTGT+AGG - chr3.3:95369719-95369738 None:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + chr3.3:95369936-95369955 MS.gene014239:CDS 20.0%
!! AATTTATACCTGAAATCATT+GGG - chr3.3:95369554-95369573 None:intergenic 20.0%
!! ACAAAAATAGTAGATTTGTA+GGG - chr3.3:95369718-95369737 None:intergenic 20.0%
!! ATCTATGATATATAACTGAT+AGG + chr3.3:95370679-95370698 MS.gene014239:intron 20.0%
!! CTAAATCACACAAAATAATT+AGG - chr3.3:95369297-95369316 None:intergenic 20.0%
!! GAAGATAAAAACAAAAAACA+CGG - chr3.3:95370319-95370338 None:intergenic 20.0%
!! TAAACAACAAACAAATCAAA+AGG + chr3.3:95368642-95368661 MS.gene014239:intron 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - chr3.3:95369872-95369891 None:intergenic 20.0%
!! TATATCATAGATATAAGCTT+TGG - chr3.3:95370671-95370690 None:intergenic 20.0%
!! TTGTAGATATAATTATTTGG+TGG - chr3.3:95367388-95367407 None:intergenic 20.0%
!!! AACGTACAATTTTTTGTTAT+TGG + chr3.3:95369781-95369800 MS.gene014239:intron 20.0%
!!! AATTTTTTTCTGGTTCATAT+TGG + chr3.3:95369250-95369269 MS.gene014239:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + chr3.3:95369240-95369259 MS.gene014239:intron 20.0%
!!! AGTGCTTGTTTTTTTTTTTT+TGG - chr3.3:95368197-95368216 None:intergenic 20.0%
!!! ATATTTTCAATATTACCAAC+AGG + chr3.3:95370921-95370940 MS.gene014239:CDS 20.0%
!!! CTAATTATTTTGTGTGATTT+AGG + chr3.3:95369295-95369314 MS.gene014239:intron 20.0%
!!! TACTTTATTTAATAACTCCA+CGG + chr3.3:95369635-95369654 MS.gene014239:intron 20.0%
!!! TATTTTCAATATTACCAACA+GGG + chr3.3:95370922-95370941 MS.gene014239:CDS 20.0%
!!! TTGTTATTTTCACTTTTTTG+TGG + chr3.3:95370440-95370459 MS.gene014239:intron 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - chr3.3:95368184-95368203 None:intergenic 20.0%
! AAAATAATTAGGAACCTCAT+TGG - chr3.3:95369286-95369305 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr3.3:95369396-95369415 MS.gene014239:CDS 25.0%
! AATATCTAAGAGTTTGAACT+CGG - chr3.3:95369826-95369845 None:intergenic 25.0%
! AATATTTACATTCAACTTCG+TGG - chr3.3:95369188-95369207 None:intergenic 25.0%
! AATCAATAAATCATAACAGG+CGG - chr3.3:95369102-95369121 None:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + chr3.3:95368467-95368486 MS.gene014239:intron 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr3.3:95369397-95369416 MS.gene014239:CDS 25.0%
! AGTAGTGATAAATGAAGAAA+AGG + chr3.3:95370777-95370796 MS.gene014239:CDS 25.0%
! ATACGGTATAATCTGTTATT+TGG + chr3.3:95369133-95369152 MS.gene014239:intron 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - chr3.3:95367646-95367665 None:intergenic 25.0%
! ATATATTTCATGTTCAATGC+AGG + chr3.3:95369903-95369922 MS.gene014239:intron 25.0%
! ATCAGGATTGTAATTATGAT+CGG + chr3.3:95367664-95367683 MS.gene014239:intron 25.0%
! CGGAAAAAAAAAATCATAAC+AGG - chr3.3:95368020-95368039 None:intergenic 25.0%
! GAATTTATACCTGAAATCAT+TGG - chr3.3:95369555-95369574 None:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - chr3.3:95367998-95368017 None:intergenic 25.0%
! TATATCTACAATGAATTAGG+TGG + chr3.3:95367397-95367416 MS.gene014239:CDS 25.0%
! TCTAATACAACTATACTTAG+AGG - chr3.3:95367940-95367959 None:intergenic 25.0%
! TGATAAATGAAGAAAAGGAA+AGG + chr3.3:95370782-95370801 MS.gene014239:CDS 25.0%
! TTAACTTAGAAGATAGTATC+AGG + chr3.3:95367647-95367666 MS.gene014239:intron 25.0%
!! AAATCAACATAGTTTTTCAC+TGG - chr3.3:95370901-95370920 None:intergenic 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - chr3.3:95368525-95368544 None:intergenic 25.0%
!!! TAAATTTTGGAAGCTTCAAT+TGG - chr3.3:95370955-95370974 None:intergenic 25.0%
!!! TATTAAGTTTTGATGCAATC+AGG + chr3.3:95367845-95367864 MS.gene014239:intron 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr3.3:95369392-95369411 None:intergenic 25.0%
AAATAATTGTGTAACGGTCA+TGG - chr3.3:95369866-95369885 None:intergenic 30.0%
AACCTACATCAACTAAATGT+TGG + chr3.3:95370559-95370578 MS.gene014239:intron 30.0%
AAGTGCTAAAAGATAATCAG+TGG + chr3.3:95370173-95370192 MS.gene014239:CDS 30.0%
AATATGTAAGACGAAAGACA+TGG + chr3.3:95368608-95368627 MS.gene014239:intron 30.0%
AATATTACCAACAGGGAAAA+AGG + chr3.3:95370929-95370948 MS.gene014239:CDS 30.0%
AATTTGGTATTATAGTCTGG+TGG - chr3.3:95368463-95368482 None:intergenic 30.0%
ACCTACATCAACTAAATGTT+GGG + chr3.3:95370560-95370579 MS.gene014239:intron 30.0%
AGTATATCTTAAGGTACATC+CGG + chr3.3:95369493-95369512 MS.gene014239:CDS 30.0%
ATATGAAGATCTGATTGTGA+AGG - chr3.3:95367448-95367467 None:intergenic 30.0%
ATCAGAGGAATTTCAAACTT+TGG + chr3.3:95369519-95369538 MS.gene014239:CDS 30.0%
CAAAAAATTGTACGTTTGCA+AGG - chr3.3:95369777-95369796 None:intergenic 30.0%
CAAAGTGGACATTAGTTATA+AGG - chr3.3:95367983-95368002 None:intergenic 30.0%
CAACACAAACATAAATCTAG+AGG + chr3.3:95368998-95369017 MS.gene014239:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + chr3.3:95369462-95369481 MS.gene014239:CDS 30.0%
GACTATAATACCAAATTAGC+AGG + chr3.3:95368466-95368485 MS.gene014239:intron 30.0%
GACTGATAGAGTATATCTTA+AGG + chr3.3:95369484-95369503 MS.gene014239:CDS 30.0%
GCTAATTTGGTATTATAGTC+TGG - chr3.3:95368466-95368485 None:intergenic 30.0%
TAGATTTGTAGGGACTAAAA+AGG - chr3.3:95369708-95369727 None:intergenic 30.0%
TATTTAATAACTCCACGGAA+AGG + chr3.3:95369640-95369659 MS.gene014239:intron 30.0%
TATTTGAGAGTAGCATTCTT+GGG - chr3.3:95369231-95369250 None:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - chr3.3:95369232-95369251 None:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + chr3.3:95369949-95369968 MS.gene014239:CDS 30.0%
! GATTATCTTTTAGCACTTGA+AGG - chr3.3:95370171-95370190 None:intergenic 30.0%
! TAATCTCTTGTTCTGAATCT+GGG - chr3.3:95370831-95370850 None:intergenic 30.0%
! TGTAGGTTTTTCATATTTGC+AGG - chr3.3:95370547-95370566 None:intergenic 30.0%
! TTAATCTCTTGTTCTGAATC+TGG - chr3.3:95370832-95370851 None:intergenic 30.0%
! TTCACTGGTCTGTATAATAT+TGG - chr3.3:95370886-95370905 None:intergenic 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + chr3.3:95370231-95370250 MS.gene014239:CDS 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + chr3.3:95367716-95367735 MS.gene014239:intron 30.0%
!! TTTTAGGTGGTGATATGTTT+TGG - chr3.3:95368168-95368187 None:intergenic 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - chr3.3:95368513-95368532 None:intergenic 30.0%
!!! TTTGACTCAAGTTGGTTTTT+GGG - chr3.3:95368404-95368423 None:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - chr3.3:95368181-95368200 None:intergenic 30.0%
!!! TTTTTTCTGGTTCATATTGG+TGG + chr3.3:95369253-95369272 MS.gene014239:intron 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + chr3.3:95370138-95370157 MS.gene014239:CDS 30.0%
AAAATCACTGAACTTGGAAG+AGG + chr3.3:95369991-95370010 MS.gene014239:CDS 35.0%
AGTTCAAATCCCCTTGAATA+CGG + chr3.3:95367777-95367796 MS.gene014239:intron 35.0%
CACGACAAAAGTAGAAGAAT+CGG + chr3.3:95370477-95370496 MS.gene014239:intron 35.0%
CATAGCAAAATCACTGAACT+TGG + chr3.3:95369985-95370004 MS.gene014239:CDS 35.0%
CATTGTTAATGGGAACTTAG+TGG - chr3.3:95369584-95369603 None:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+CGG + chr3.3:95368436-95368455 MS.gene014239:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + chr3.3:95369373-95369392 MS.gene014239:CDS 35.0%
GCTATTTGTCATATTGTGTG+TGG - chr3.3:95370621-95370640 None:intergenic 35.0%
GTGATTTAGGCAATAAACCA+TGG + chr3.3:95369308-95369327 MS.gene014239:intron 35.0%
GTTACACAGATAATGAGCAA+TGG + chr3.3:95370730-95370749 MS.gene014239:intron 35.0%
TACAATGAATTAGGTGGTGT+TGG + chr3.3:95367403-95367422 MS.gene014239:CDS 35.0%
TATAAGGTTAAGACGCATGA+GGG - chr3.3:95367967-95367986 None:intergenic 35.0%
TATTCAAGGGGATTTGAACT+CGG - chr3.3:95367777-95367796 None:intergenic 35.0%
TGGACGAATCAAGATACAAA+TGG + chr3.3:95368085-95368104 MS.gene014239:intron 35.0%
TGTAGATGGAGAAATGAGTT+TGG - chr3.3:95367488-95367507 None:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - chr3.3:95367968-95367987 None:intergenic 35.0%
TTGAAATTCCTCTGATCTTC+CGG - chr3.3:95369515-95369534 None:intergenic 35.0%
TTGGATGGTTTAGGTGTTTA+CGG - chr3.3:95368706-95368725 None:intergenic 35.0%
TTTATCACTACTCTGTGTAC+TGG - chr3.3:95370769-95370788 None:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - chr3.3:95369547-95369566 None:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - chr3.3:95369987-95370006 None:intergenic 35.0%
! CATAGATATAAGCTTTGGTG+TGG - chr3.3:95370666-95370685 None:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - chr3.3:95369546-95369565 None:intergenic 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - chr3.3:95369545-95369564 None:intergenic 35.0%
! GTAACACATTCAAGTTCAAC+AGG - chr3.3:95370715-95370734 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr3.3:95368986-95369005 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr3.3:95368436-95368455 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr3.3:95368437-95368456 None:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - chr3.3:95368725-95368744 None:intergenic 35.0%
!! TCTTGTTTGTGCTTTTTGGA+TGG - chr3.3:95368721-95368740 None:intergenic 35.0%
!! TTGTGCTTTTTGGATGGTTT+AGG - chr3.3:95368715-95368734 None:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - chr3.3:95368151-95368170 None:intergenic 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - chr3.3:95368595-95368614 None:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - chr3.3:95368259-95368278 None:intergenic 35.0%
!!! CTTTGACTCAAGTTGGTTTT+TGG - chr3.3:95368405-95368424 None:intergenic 35.0%
!!! GTCTGGGAGTTTTATTTTGA+GGG - chr3.3:95368272-95368291 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - chr3.3:95368260-95368279 None:intergenic 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - chr3.3:95368140-95368159 None:intergenic 35.0%
AAATATGCAAGGGAGCCAAA+CGG + chr3.3:95369407-95369426 MS.gene014239:CDS 40.0%
AAATCCCCTTGAATACGGTT+TGG + chr3.3:95367782-95367801 MS.gene014239:intron 40.0%
AGGTTATTCAATTGTGGTGG+GGG - chr3.3:95368891-95368910 None:intergenic 40.0%
AGTTTGGCAATGTCAACAAC+TGG - chr3.3:95367472-95367491 None:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - chr3.3:95370115-95370134 None:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - chr3.3:95368335-95368354 None:intergenic 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + chr3.3:95367348-95367367 MS.gene014239:CDS 40.0%
CAACCCAGATCATAAAAAGG+CGG + chr3.3:95369076-95369095 MS.gene014239:intron 40.0%
CACGATAGTATCAGAGATGA+AGG - chr3.3:95370358-95370377 None:intergenic 40.0%
CCACAACCCAGATCATAAAA+AGG + chr3.3:95369073-95369092 MS.gene014239:intron 40.0%
CCATATCCTTCAATACCGTT+TGG - chr3.3:95369425-95369444 None:intergenic 40.0%
CCCAAAAACCCAATGATTTC+AGG + chr3.3:95369543-95369562 MS.gene014239:CDS 40.0%
CGAAATCCAACGACAAAACA+CGG + chr3.3:95369025-95369044 MS.gene014239:intron 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + chr3.3:95370145-95370164 MS.gene014239:CDS 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + chr3.3:95369340-95369359 MS.gene014239:CDS 40.0%
GAAATCCAACGACAAAACAC+GGG + chr3.3:95369026-95369045 MS.gene014239:intron 40.0%
GAGGTTATTCAATTGTGGTG+GGG - chr3.3:95368892-95368911 None:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + chr3.3:95370217-95370236 MS.gene014239:CDS 40.0%
GATTGCTTCCTAAAGGAATG+TGG + chr3.3:95370013-95370032 MS.gene014239:CDS 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - chr3.3:95369219-95369238 None:intergenic 40.0%
GGAGGTTATTCAATTGTGGT+GGG - chr3.3:95368893-95368912 None:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + chr3.3:95368767-95368786 MS.gene014239:intron 40.0%
GTCAGTTCTTTGACTCAAGT+TGG - chr3.3:95368412-95368431 None:intergenic 40.0%
GTTTAGGTGTTTACGGAGTT+TGG - chr3.3:95368699-95368718 None:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - chr3.3:95368766-95368785 None:intergenic 40.0%
TATGGTGTACCGTCTATATG+CGG - chr3.3:95368113-95368132 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr3.3:95368602-95368621 None:intergenic 40.0%
TGGAGGTTATTCAATTGTGG+TGG - chr3.3:95368894-95368913 None:intergenic 40.0%
TGGTGGAGGTTATTCAATTG+TGG - chr3.3:95368897-95368916 None:intergenic 40.0%
TGTTAATGGGAACTTAGTGG+AGG - chr3.3:95369581-95369600 None:intergenic 40.0%
TTTACGCCTAGAACATGATC+AGG - chr3.3:95370091-95370110 None:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - chr3.3:95368150-95368169 None:intergenic 40.0%
! AGTTCATTTGGCTTCGAGAT+CGG - chr3.3:95368566-95368585 None:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + chr3.3:95369422-95369441 MS.gene014239:CDS 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - chr3.3:95369076-95369095 None:intergenic 40.0%
! GCCCAACATTTAGTTGATGT+AGG - chr3.3:95370564-95370583 None:intergenic 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - chr3.3:95368972-95368991 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr3.3:95368981-95369000 None:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - chr3.3:95370217-95370236 None:intergenic 40.0%
!! AGGTGGTGATATGTTTTGGA+GGG - chr3.3:95368164-95368183 None:intergenic 40.0%
!! CATTAATCACGAGAGCATCA+GGG - chr3.3:95370216-95370235 None:intergenic 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + chr3.3:95370235-95370254 MS.gene014239:intron 40.0%
!! TAGGTGGTGATATGTTTTGG+AGG - chr3.3:95368165-95368184 None:intergenic 40.0%
!! TCGGCAGAGGTTGATATAAT+CGG + chr3.3:95367319-95367338 MS.gene014239:CDS 40.0%
!!! GGTCTGGGAGTTTTATTTTG+AGG - chr3.3:95368273-95368292 None:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - chr3.3:95368152-95368171 None:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - chr3.3:95368505-95368524 None:intergenic 40.0%
AAGACAGCAAAACCTTTCCG+TGG - chr3.3:95369655-95369674 None:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - chr3.3:95370079-95370098 None:intergenic 45.0%
AGATGCAACCTCTGTTACAC+GGG - chr3.3:95368765-95368784 None:intergenic 45.0%
AGGTGTTTACGGAGTTTGGA+GGG - chr3.3:95368695-95368714 None:intergenic 45.0%
CAGTCCAAACCGTATTCAAG+GGG - chr3.3:95367789-95367808 None:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - chr3.3:95370085-95370104 None:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + chr3.3:95370082-95370101 MS.gene014239:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr3.3:95370024-95370043 None:intergenic 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + chr3.3:95367543-95367562 MS.gene014239:CDS 45.0%
GAGACAAGCTTGTCATACCA+TGG - chr3.3:95369328-95369347 None:intergenic 45.0%
GATCTCGAAGCCAAATGAAC+TGG + chr3.3:95368565-95368584 MS.gene014239:intron 45.0%
GCAGTCCAAACCGTATTCAA+GGG - chr3.3:95367790-95367809 None:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + chr3.3:95369339-95369358 MS.gene014239:CDS 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + chr3.3:95370006-95370025 MS.gene014239:CDS 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - chr3.3:95368313-95368332 None:intergenic 45.0%
TAAACCAGTCGACAGACTAG+TGG + chr3.3:95370849-95370868 MS.gene014239:CDS 45.0%
TAGGTGTTTACGGAGTTTGG+AGG - chr3.3:95368696-95368715 None:intergenic 45.0%
TGCAGTCCAAACCGTATTCA+AGG - chr3.3:95367791-95367810 None:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - chr3.3:95368330-95368349 None:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - chr3.3:95368242-95368261 None:intergenic 45.0%
TTCGAAATGTGGCTCAGCTT+GGG - chr3.3:95368302-95368321 None:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - chr3.3:95368243-95368262 None:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + chr3.3:95367800-95367819 MS.gene014239:intron 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - chr3.3:95368380-95368399 None:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - chr3.3:95368383-95368402 None:intergenic 45.0%
! GTTCATTTGGCTTCGAGATC+GGG - chr3.3:95368565-95368584 None:intergenic 45.0%
! TTATTCAATTGTGGTGGGGG+TGG - chr3.3:95368888-95368907 None:intergenic 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + chr3.3:95367730-95367749 MS.gene014239:intron 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - chr3.3:95370208-95370227 None:intergenic 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr3.3:95368101-95368120 MS.gene014239:intron 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - chr3.3:95368818-95368837 None:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - chr3.3:95368811-95368830 None:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - chr3.3:95368815-95368834 None:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - chr3.3:95368969-95368988 None:intergenic 45.0%
!! TGATGATGTGTGTTGGTGGT+TGG - chr3.3:95368832-95368851 None:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - chr3.3:95368812-95368831 None:intergenic 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - chr3.3:95368591-95368610 None:intergenic 45.0%
!!! CAATTGGCCTTTTTCCCTGT+TGG - chr3.3:95370939-95370958 None:intergenic 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - chr3.3:95368131-95368150 None:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - chr3.3:95368504-95368523 None:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - chr3.3:95368503-95368522 None:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - chr3.3:95368592-95368611 None:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - chr3.3:95368137-95368156 None:intergenic 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - chr3.3:95368502-95368521 None:intergenic 45.0%
AACATGGACCCGTGTAACAG+AGG + chr3.3:95368754-95368773 MS.gene014239:intron 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr3.3:95368738-95368757 MS.gene014239:intron 50.0%
AGGTACATCCGGAAGATCAG+AGG + chr3.3:95369504-95369523 MS.gene014239:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - chr3.3:95367502-95367521 None:intergenic 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + chr3.3:95367532-95367551 MS.gene014239:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + chr3.3:95367531-95367550 MS.gene014239:CDS 50.0%
CTACTCTGTGTACTGGACTC+TGG - chr3.3:95370762-95370781 None:intergenic 50.0%
CTTCGAAATGTGGCTCAGCT+TGG - chr3.3:95368303-95368322 None:intergenic 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + chr3.3:95367804-95367823 MS.gene014239:intron 50.0%
GATCAGGCATAGGACATGGA+GGG - chr3.3:95370075-95370094 None:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - chr3.3:95369060-95369079 None:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + chr3.3:95367530-95367549 MS.gene014239:CDS 50.0%
TGATCAGGCATAGGACATGG+AGG - chr3.3:95370076-95370095 None:intergenic 50.0%
TTCTCCATCTACAGCACAGC+AGG + chr3.3:95367495-95367514 MS.gene014239:CDS 50.0%
TTTCGGTGGGCCAGTTCATT+TGG - chr3.3:95368578-95368597 None:intergenic 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + chr3.3:95369416-95369435 MS.gene014239:CDS 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - chr3.3:95369082-95369101 None:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + chr3.3:95369269-95369288 MS.gene014239:intron 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + chr3.3:95368319-95368338 MS.gene014239:intron 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - chr3.3:95368944-95368963 None:intergenic 50.0%
ATGTGGCTCAGCTTGGGTGT+TGG - chr3.3:95368296-95368315 None:intergenic 55.0%
CCAGTCGACAGACTAGTGGA+CGG + chr3.3:95370853-95370872 MS.gene014239:CDS 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - chr3.3:95367534-95367553 None:intergenic 55.0%
CGTCCATACCTTGCGTCTTG+CGG - chr3.3:95368071-95368090 None:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - chr3.3:95368947-95368966 None:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + chr3.3:95367803-95367822 MS.gene014239:intron 55.0%
GGCGTAAAGCCACATGCTGA+TGG + chr3.3:95370103-95370122 MS.gene014239:CDS 55.0%
GGGTGAGTAGTGACAATGGG+CGG - chr3.3:95368239-95368258 None:intergenic 55.0%
GTCCATACCTTGCGTCTTGC+GGG - chr3.3:95368070-95368089 None:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - chr3.3:95368372-95368391 None:intergenic 55.0%
TCCATACCTTGCGTCTTGCG+GGG - chr3.3:95368069-95368088 None:intergenic 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - chr3.3:95368800-95368819 None:intergenic 55.0%
TGAGTAGTGACAATGGGCGG+TGG - chr3.3:95368236-95368255 None:intergenic 55.0%
TGTGGCTCAGCTTGGGTGTT+GGG - chr3.3:95368295-95368314 None:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - chr3.3:95368559-95368578 None:intergenic 55.0%
! CAGTCGACAGACTAGTGGAC+GGG + chr3.3:95370854-95370873 MS.gene014239:CDS 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - chr3.3:95369083-95369102 None:intergenic 55.0%
! GGGGTGATGATGTGTGTTGG+TGG - chr3.3:95368836-95368855 None:intergenic 55.0%
! TGGGGGGTGATGATGTGTGT+TGG - chr3.3:95368839-95368858 None:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - chr3.3:95368858-95368877 None:intergenic 55.0%
GCGGCGTAGTGATGCAGTGA+TGG - chr3.3:95368950-95368969 None:intergenic 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - chr3.3:95368801-95368820 None:intergenic 60.0%
TCCCCGCAAGACGCAAGGTA+TGG + chr3.3:95368065-95368084 MS.gene014239:intron 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - chr3.3:95368558-95368577 None:intergenic 60.0%
! AGAATCGGTGGGTTCGGCAG+AGG + chr3.3:95367306-95367325 MS.gene014239:CDS 60.0%
! CCGTCCACTAGTCTGTCGAC+TGG - chr3.3:95370856-95370875 None:intergenic 60.0%
! CGCTGCCCGTGTTTTGTCGT+TGG - chr3.3:95369034-95369053 None:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - chr3.3:95368799-95368818 None:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - chr3.3:95368857-95368876 None:intergenic 60.0%
! GTGGCTCAGCTTGGGTGTTG+GGG - chr3.3:95368294-95368313 None:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - chr3.3:95368856-95368875 None:intergenic 60.0%
! TGGTGGTGAAGTGTGGTGGG+GGG - chr3.3:95368855-95368874 None:intergenic 60.0%
!! CAGCTTGGGTGTTGGGGTCT+GGG - chr3.3:95368288-95368307 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr3.3:95368479-95368498 None:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - chr3.3:95368934-95368953 None:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - chr3.3:95368859-95368878 None:intergenic 60.0%
!! TCAGCTTGGGTGTTGGGGTC+TGG - chr3.3:95368289-95368308 None:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - chr3.3:95368862-95368881 None:intergenic 60.0%
!! TGGTGATGCAGTGGTGGTGG+AGG - chr3.3:95368911-95368930 None:intergenic 60.0%
CAAAACACGGGCAGCGACGC+CGG + chr3.3:95369038-95369057 MS.gene014239:intron 65.0%
CGTCTTCCCCGCAAGACGCA+AGG + chr3.3:95368060-95368079 MS.gene014239:intron 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - chr3.3:95368557-95368576 None:intergenic 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - chr3.3:95368364-95368383 None:intergenic 65.0%
! CGGTGGTGATGCAGTGGTGG+TGG - chr3.3:95368914-95368933 None:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - chr3.3:95368920-95368939 None:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - chr3.3:95368931-95368950 None:intergenic 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + chr3.3:95369048-95369067 MS.gene014239:intron 65.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr3.3:95368496-95368515 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr3.3:95368497-95368516 None:intergenic 70.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr3.3:95368495-95368514 None:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+TGG - chr3.3:95368917-95368936 None:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - chr3.3:95368872-95368891 None:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - chr3.3:95368875-95368894 None:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - chr3.3:95368878-95368897 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr3.3:95368483-95368502 MS.gene014239:intron 80.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 95367301 95370975 95367301 ID=MS.gene014239
chr3.3 mRNA 95367301 95370975 95367301 ID=MS.gene014239.t1;Parent=MS.gene014239
chr3.3 exon 95367301 95367564 95367301 ID=MS.gene014239.t1.exon1;Parent=MS.gene014239.t1
chr3.3 CDS 95367301 95367564 95367301 ID=cds.MS.gene014239.t1;Parent=MS.gene014239.t1
chr3.3 exon 95369317 95369564 95369317 ID=MS.gene014239.t1.exon2;Parent=MS.gene014239.t1
chr3.3 CDS 95369317 95369564 95369317 ID=cds.MS.gene014239.t1;Parent=MS.gene014239.t1
chr3.3 exon 95369925 95370252 95369925 ID=MS.gene014239.t1.exon3;Parent=MS.gene014239.t1
chr3.3 CDS 95369925 95370252 95369925 ID=cds.MS.gene014239.t1;Parent=MS.gene014239.t1
chr3.3 exon 95370739 95370975 95370739 ID=MS.gene014239.t1.exon4;Parent=MS.gene014239.t1
chr3.3 CDS 95370739 95370975 95370739 ID=cds.MS.gene014239.t1;Parent=MS.gene014239.t1
Gene Sequence

>MS.gene014239

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGAAGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGGTCAACTTTTCTGTATTTTAATACCAACTGCTAATATTTTCTATTTAATTATATATACTTTTATTTCAGTTAAGTATTCCTCTTAACTTAGAAGATAGTATCAGGATTGTAATTATGATCGGATCTAACTTCGTGAGAAGAGACACTAAGATAGTTTGTTTGTTGTTTACGAGGTATCAGCTCAGTGGTAAGAGTTTGAGCTTAAGATACCGAGTTCAAATCCCCTTGAATACGGTTTGGACTGCAAGCAGTTCTTGGTGGGTGCATTTTTAGCTACTTTTATTAAGTTTTGATGCAATCAGGATCCCATCAAATAAAGTTTTAGAATAATCATTATTGTCATTTTAACAAGAAAATATAATAAACATTGATCCTCTAAGTATAGTTGTATTAGAGAAGCCCTCATGCGTCTTAACCTTATAACTAATGTCCACTTTGTATATTTTATCTGTCCTGTTATGATTTTTTTTTTCCGAATCTGCAAATATTATTAAACGTCTTCCCCGCAAGACGCAAGGTATGGACGAATCAAGATACAAATGGTGCCGCATATAGACGGTACACCATAACCACCTAAAAACACCCCTGAAGATAAACCCTCCAAAACATATCACCACCTAAAACAAACTCCAAAAAAAAAAAAACAAGCACTGTAAACACGATATACACCACCGCCCATTGTCACTACTCACCCACAAAGAACACCCTCAAAATAAAACTCCCAGACCCCAACACCCAAGCTGAGCCACATTTCGAAGAGCACCTAACCGAAGAAGGATCATGCAGCTATCACAAACCTCGCGACCTCTGAACCACCGAAAGAGCACAACACAAAGCCCAAAAACCAACTTGAGTCAAAGAACTGACTCCCGATCTCGAATCAAAAGTGATCGGTCCACCAGACTATAATACCAAATTAGCAGGGCACCCCTCGCCCCCGGTACACCAGAGAAAAAACCAAATCAAGTCAAACAAAGATTGCAGCTAGACCCCGACTCCCGATCTCGAAGCCAAATGAACTGGCCCACCGAAAACCAGCACACAATATGTAAGACGAAAGACATGGCATGCGAAGTTTAAACAACAAACAAATCAAAAGGAAAATGCTCAACACAGCGTGACATGCACCCTCCAAACTCCGTAAACACCTAAACCATCCAAAAAGCACAAACAAGAGCTAGTGACGACGAACATGGACCCGTGTAACAGAGGTTGCATCTAAAGGAAATCACCCCAACAAGCACCCACCTCCTCACTTAAAACACCAACCACCAACACACATCATCACCCCCCACCACACTTCACCACCACCACGCATCACCACCCCCACCACAATTGAATAACCTCCACCACCACTGCATCACCACCGCGCAACACCACCACCATCACTGCATCACTACGCCGCCAAAACATCCTCACCAAGAAACAAGCAACAACACAAACATAAATCTAGAGGAAGACGAAATCCAACGACAAAACACGGGCAGCGACGCCGGTTTGAAGCGGAACCACAACCCAGATCATAAAAAGGCGGCCGCCTGTTATGATTTATTGATTTAAATTAGAGAATACGGTATAATCTGTTATTTGGATACTCAAGTAGTTCTATAATGATTCAAACCACGAAGTTGAATGTAAATATTAGATATGGCCTTTTCACAAACCCAAGAATGCTACTCTCAAATAATTTTTTTCTGGTTCATATTGGTGGCTGAGTTCCAATGAGGTTCCTAATTATTTTGTGTGATTTAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCAGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGTATAAATTCTTACCTCCACTAAGTTCCCATTAACAATGAATATTCTTTTAATTGACATGAAGTAACTAATACTTTATTTAATAACTCCACGGAAAGGTTTTGCTGTCTTCGATATTCATACACTGTAAGCATTTAAATACCTTTTTAGTCCCTACAAATCTACTATTTTTGTTTTTAGTCTCTGTAAAACATTTTTTTTGTTTTTAATCCTTGCAAACGTACAATTTTTTGTTATTGGTCTTCACTATTTTTTGATTCCGAGTTCAAACTCTTAGATATTTGAAAGAAGATTGTAAACCATGACCGTTACACAATTATTTTCTCTATTACACGAACTATATATTTCATGTTCAATGCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGTAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTGCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGGTTGGTAATTAACTACTAACTAAGTTCTTTATCTTTGTTTGTTTAAACTTTTTGTTTTTACTTCCGTGTTTTTTGTTTTTATCTTCACTTCAACTGATATTTCCTTCATCTCTGATACTATCGTGATTAATGTTTCTACATCAGAACTTGTTTTAGAAATCTATGATGTGATTAAGTTTTCACGAGATTGTTATTTTCACTTTTTTGTGGTATTTGCATATGTTCACGACAAAAGTAGAAGAATCGGTGTGCATGTTTTAATTCAAATTTACATCAACTAAATATTGAACACCTGCAAATATGAAAAACCTACATCAACTAAATGTTGGGCATCTTAGATATGACGATCTTACTATTTCATTCATCCACACACAATATGACAAATAGCAAGCTTGTCTATAGATTTAGTACCACACCAAAGCTTATATCTATGATATATAACTGATAGGATTGACACAACCTGTTGAACTTGAATGTGTTACACAGATAATGAGCAATGGAATTTTCCAGAGTCCAGTACACAGAGTAGTGATAAATGAAGAAAAGGAAAGGCTCACAGTAGCAATGTTCTGCATCCCAGATTCAGAACAAGAGATTAAACCAGTCGACAGACTAGTGGACGGGACAAAGCCAATATTATACAGACCAGTGAAAAACTATGTTGATTTATATTTTCAATATTACCAACAGGGAAAAAGGCCAATTGAAGCTTCCAAAATTTAA
Protein sequence

>MS.gene014239.t1

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFREALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDQRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGVKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEIMSNGIFQSPVHRVVINEEKERLTVAMFCIPDSEQEIKPVDRLVDGTKPILYRPVKNYVDLYFQYYQQGKRPIEASKI