Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08507.t1 | XP_013444533.1 | 64.7 | 340 | 7 | 1 | 1 | 227 | 4 | 343 | 6.60E-113 | 416.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08507.t1 | Q9ZSA7 | 40.0 | 340 | 89 | 2 | 2 | 226 | 5 | 344 | 1.7e-64 | 247.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08507.t1 | A0A072TNY3 | 64.7 | 340 | 7 | 1 | 1 | 227 | 4 | 343 | 4.7e-113 | 416.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08507 | MS.gene44249 | PPI |
| MS.gene08507 | MS.gene014239 | PPI |
| MS.gene08507 | MS.gene026406 | PPI |
| MS.gene08507 | MS.gene028298 | PPI |
| MS.gene08507 | MS.gene012106 | PPI |
| MS.gene08507 | MS.gene017642 | PPI |
| MS.gene08507 | MS.gene014238 | PPI |
| MS.gene08507 | MS.gene023156 | PPI |
| MS.gene08507 | MS.gene061671 | PPI |
| MS.gene08507 | MS.gene23787 | PPI |
| MS.gene44248 | MS.gene08507 | PPI |
| MS.gene004422 | MS.gene08507 | PPI |
| MS.gene08507 | MS.gene81083 | PPI |
| MS.gene08507 | MS.gene017546 | PPI |
| MS.gene08507 | MS.gene96237 | PPI |
| MS.gene68181 | MS.gene08507 | PPI |
| MS.gene08507 | MS.gene061056 | PPI |
| MS.gene08507 | MS.gene89655 | PPI |
| MS.gene08507 | MS.gene040837 | PPI |
| MS.gene08507 | MS.gene89654 | PPI |
| MS.gene08507 | MS.gene063125 | PPI |
| MS.gene08507 | MS.gene68775 | PPI |
| MS.gene08507 | MS.gene36494 | PPI |
| MS.gene35159 | MS.gene08507 | PPI |
| MS.gene012107 | MS.gene08507 | PPI |
| MS.gene002734 | MS.gene08507 | PPI |
| MS.gene08507 | MS.gene68180 | PPI |
| MS.gene08507 | MS.gene063124 | PPI |
| MS.gene08507 | MS.gene59930 | PPI |
| MS.gene08507 | MS.gene68178 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08507.t1 | MTR_8g024120 | 97.386 | 153 | 4 | 0 | 1 | 153 | 4 | 156 | 9.01e-108 | 314 |
| MS.gene08507.t1 | MTR_8g024120 | 96.000 | 75 | 3 | 0 | 153 | 227 | 269 | 343 | 7.39e-46 | 155 |
| MS.gene08507.t1 | MTR_3g092890 | 56.835 | 139 | 56 | 2 | 15 | 153 | 15 | 149 | 8.00e-51 | 168 |
| MS.gene08507.t1 | MTR_3g092890 | 50.685 | 73 | 36 | 0 | 154 | 226 | 264 | 336 | 1.46e-18 | 83.2 |
| MS.gene08507.t1 | MTR_1g062110 | 43.243 | 148 | 80 | 2 | 10 | 153 | 33 | 180 | 9.35e-36 | 129 |
| MS.gene08507.t1 | MTR_1g062110 | 43.836 | 146 | 78 | 2 | 12 | 153 | 35 | 180 | 2.85e-35 | 129 |
| MS.gene08507.t1 | MTR_1g070135 | 42.581 | 155 | 85 | 3 | 1 | 153 | 1 | 153 | 7.53e-34 | 123 |
| MS.gene08507.t1 | MTR_1g070135 | 42.581 | 155 | 85 | 3 | 1 | 153 | 1 | 153 | 1.58e-33 | 123 |
| MS.gene08507.t1 | MTR_7g081710 | 37.931 | 145 | 89 | 1 | 12 | 155 | 22 | 166 | 3.50e-33 | 122 |
| MS.gene08507.t1 | MTR_1g070120 | 40.000 | 155 | 89 | 3 | 1 | 153 | 1 | 153 | 8.65e-33 | 121 |
| MS.gene08507.t1 | MTR_1g048940 | 37.415 | 147 | 87 | 2 | 11 | 155 | 20 | 163 | 7.41e-32 | 119 |
| MS.gene08507.t1 | MTR_1g070080 | 37.662 | 154 | 94 | 2 | 1 | 153 | 1 | 153 | 7.54e-29 | 111 |
| MS.gene08507.t1 | MTR_7g102820 | 35.374 | 147 | 90 | 1 | 12 | 153 | 35 | 181 | 5.68e-28 | 109 |
| MS.gene08507.t1 | MTR_5g065010 | 38.889 | 144 | 80 | 3 | 12 | 152 | 13 | 151 | 5.80e-26 | 103 |
| MS.gene08507.t1 | MTR_5g065010 | 35.526 | 76 | 48 | 1 | 153 | 227 | 267 | 342 | 3.25e-11 | 62.4 |
| MS.gene08507.t1 | MTR_5g082750 | 34.899 | 149 | 90 | 4 | 10 | 153 | 20 | 166 | 6.98e-24 | 98.2 |
| MS.gene08507.t1 | MTR_1g070085 | 33.103 | 145 | 95 | 2 | 10 | 153 | 9 | 152 | 1.11e-22 | 94.7 |
| MS.gene08507.t1 | MTR_1g070085 | 33.103 | 145 | 95 | 2 | 10 | 153 | 9 | 152 | 1.11e-22 | 94.7 |
| MS.gene08507.t1 | MTR_7g016090 | 33.113 | 151 | 96 | 3 | 4 | 153 | 5 | 151 | 2.49e-22 | 93.6 |
| MS.gene08507.t1 | MTR_7g016090 | 33.113 | 151 | 96 | 3 | 4 | 153 | 7 | 153 | 2.53e-22 | 93.6 |
| MS.gene08507.t1 | MTR_7g068650 | 33.987 | 153 | 90 | 5 | 10 | 153 | 21 | 171 | 8.29e-22 | 92.4 |
| MS.gene08507.t1 | MTR_6g015950 | 32.237 | 152 | 97 | 3 | 4 | 153 | 5 | 152 | 3.71e-21 | 90.1 |
| MS.gene08507.t1 | MTR_3g070860 | 32.414 | 145 | 93 | 3 | 13 | 153 | 24 | 167 | 7.56e-21 | 89.7 |
| MS.gene08507.t1 | MTR_3g091360 | 35.766 | 137 | 80 | 3 | 38 | 170 | 51 | 183 | 1.30e-20 | 89.0 |
| MS.gene08507.t1 | MTR_3g058610 | 34.591 | 159 | 94 | 7 | 1 | 153 | 1 | 155 | 2.40e-20 | 88.2 |
| MS.gene08507.t1 | MTR_4g015790 | 32.716 | 162 | 89 | 5 | 10 | 153 | 20 | 179 | 3.80e-20 | 87.8 |
| MS.gene08507.t1 | MTR_5g032880 | 41.353 | 133 | 73 | 4 | 18 | 146 | 356 | 487 | 4.22e-20 | 88.6 |
| MS.gene08507.t1 | MTR_5g032880 | 38.060 | 134 | 72 | 4 | 18 | 148 | 18 | 143 | 2.62e-17 | 80.5 |
| MS.gene08507.t1 | MTR_5g032880 | 42.857 | 63 | 36 | 0 | 153 | 215 | 263 | 325 | 8.78e-12 | 64.3 |
| MS.gene08507.t1 | MTR_5g022020 | 34.228 | 149 | 91 | 5 | 9 | 153 | 10 | 155 | 4.28e-20 | 87.8 |
| MS.gene08507.t1 | MTR_7g016080 | 32.237 | 152 | 98 | 3 | 4 | 153 | 5 | 153 | 4.98e-20 | 87.0 |
| MS.gene08507.t1 | MTR_3g088565 | 34.437 | 151 | 76 | 7 | 38 | 176 | 2 | 141 | 2.11e-19 | 85.1 |
| MS.gene08507.t1 | MTR_5g032870 | 41.176 | 136 | 69 | 4 | 18 | 146 | 18 | 149 | 2.27e-19 | 85.5 |
| MS.gene08507.t1 | MTR_5g032870 | 36.000 | 75 | 48 | 0 | 153 | 227 | 271 | 345 | 2.29e-12 | 65.5 |
| MS.gene08507.t1 | MTR_8g075890 | 32.168 | 143 | 90 | 5 | 15 | 153 | 16 | 155 | 6.72e-19 | 84.3 |
| MS.gene08507.t1 | MTR_3g043900 | 39.855 | 138 | 72 | 6 | 15 | 147 | 29 | 160 | 8.72e-19 | 84.0 |
| MS.gene08507.t1 | MTR_3g043900 | 33.333 | 75 | 50 | 0 | 153 | 227 | 279 | 353 | 2.44e-11 | 62.8 |
| MS.gene08507.t1 | MTR_8g075830 | 32.867 | 143 | 89 | 5 | 15 | 153 | 16 | 155 | 1.44e-18 | 83.6 |
| MS.gene08507.t1 | MTR_3g091350 | 34.247 | 146 | 82 | 6 | 15 | 153 | 35 | 173 | 8.58e-18 | 81.3 |
| MS.gene08507.t1 | MTR_2g068850 | 34.286 | 140 | 85 | 5 | 10 | 146 | 28 | 163 | 1.13e-17 | 79.0 |
| MS.gene08507.t1 | MTR_3g026150 | 33.520 | 179 | 106 | 8 | 3 | 175 | 22 | 193 | 1.16e-17 | 80.1 |
| MS.gene08507.t1 | MTR_3g026150 | 33.520 | 179 | 106 | 8 | 3 | 175 | 22 | 193 | 2.18e-17 | 80.1 |
| MS.gene08507.t1 | MTR_3g045230 | 36.496 | 137 | 77 | 5 | 16 | 147 | 30 | 161 | 4.63e-17 | 79.0 |
| MS.gene08507.t1 | MTR_3g045230 | 32.000 | 75 | 51 | 0 | 153 | 227 | 280 | 354 | 6.74e-11 | 61.2 |
| MS.gene08507.t1 | MTR_2g068840 | 33.094 | 139 | 88 | 4 | 10 | 146 | 28 | 163 | 6.84e-17 | 78.6 |
| MS.gene08507.t1 | MTR_3g063180 | 32.886 | 149 | 86 | 5 | 10 | 152 | 16 | 156 | 9.04e-17 | 78.2 |
| MS.gene08507.t1 | MTR_7g062570 | 33.333 | 147 | 85 | 7 | 13 | 153 | 29 | 168 | 3.99e-16 | 76.6 |
| MS.gene08507.t1 | MTR_2g068960 | 32.479 | 117 | 77 | 1 | 32 | 146 | 56 | 172 | 7.21e-16 | 75.9 |
| MS.gene08507.t1 | MTR_7g062550 | 33.094 | 139 | 90 | 3 | 15 | 152 | 36 | 172 | 1.23e-15 | 75.1 |
| MS.gene08507.t1 | MTR_1g070185 | 30.345 | 145 | 94 | 2 | 8 | 152 | 38 | 175 | 2.48e-15 | 74.3 |
| MS.gene08507.t1 | MTR_2g068950 | 33.333 | 111 | 72 | 1 | 38 | 146 | 62 | 172 | 2.53e-15 | 74.3 |
| MS.gene08507.t1 | MTR_2g069300 | 39.785 | 93 | 54 | 1 | 39 | 129 | 54 | 146 | 3.30e-15 | 73.9 |
| MS.gene08507.t1 | MTR_7g029655 | 32.258 | 93 | 62 | 1 | 39 | 131 | 67 | 158 | 5.73e-15 | 73.2 |
| MS.gene08507.t1 | MTR_7g045650 | 33.103 | 145 | 86 | 5 | 14 | 153 | 35 | 173 | 7.12e-15 | 72.8 |
| MS.gene08507.t1 | MTR_7g062580 | 31.690 | 142 | 92 | 4 | 14 | 153 | 30 | 168 | 7.86e-15 | 72.8 |
| MS.gene08507.t1 | MTR_8g041600 | 37.500 | 104 | 61 | 1 | 38 | 137 | 67 | 170 | 8.12e-15 | 72.4 |
| MS.gene08507.t1 | MTR_1g032220 | 29.577 | 142 | 90 | 3 | 10 | 146 | 43 | 179 | 8.76e-15 | 72.8 |
| MS.gene08507.t1 | MTR_5g055690 | 32.759 | 116 | 76 | 2 | 39 | 153 | 47 | 161 | 9.66e-15 | 71.6 |
| MS.gene08507.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 38 | 137 | 26 | 127 | 1.03e-14 | 71.6 |
| MS.gene08507.t1 | MTR_1g093120 | 28.643 | 199 | 120 | 6 | 38 | 227 | 66 | 251 | 1.03e-14 | 72.4 |
| MS.gene08507.t1 | MTR_8g041600 | 38.776 | 98 | 56 | 1 | 38 | 131 | 67 | 164 | 1.26e-14 | 72.4 |
| MS.gene08507.t1 | MTR_2g069070 | 32.353 | 102 | 67 | 1 | 38 | 137 | 48 | 149 | 1.27e-14 | 70.1 |
| MS.gene08507.t1 | MTR_1g032250 | 30.435 | 138 | 94 | 2 | 10 | 146 | 43 | 179 | 1.47e-14 | 72.0 |
| MS.gene08507.t1 | MTR_5g055690 | 32.759 | 116 | 76 | 2 | 39 | 153 | 47 | 161 | 1.81e-14 | 71.6 |
| MS.gene08507.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 38 | 137 | 48 | 149 | 1.86e-14 | 71.6 |
| MS.gene08507.t1 | MTR_2g069010 | 32.353 | 102 | 67 | 1 | 38 | 137 | 68 | 169 | 1.90e-14 | 72.0 |
| MS.gene08507.t1 | MTR_1g032140 | 30.769 | 130 | 88 | 2 | 10 | 138 | 36 | 164 | 2.30e-14 | 71.6 |
| MS.gene08507.t1 | MTR_0032s0040 | 32.824 | 131 | 78 | 5 | 10 | 131 | 34 | 163 | 2.46e-14 | 71.6 |
| MS.gene08507.t1 | MTR_4g093840 | 32.258 | 155 | 83 | 6 | 37 | 176 | 60 | 207 | 4.48e-14 | 70.9 |
| MS.gene08507.t1 | MTR_2g069020 | 32.353 | 102 | 67 | 1 | 38 | 137 | 66 | 167 | 5.52e-14 | 70.5 |
| MS.gene08507.t1 | MTR_2g069020 | 32.353 | 102 | 67 | 1 | 38 | 137 | 66 | 167 | 6.05e-14 | 70.5 |
| MS.gene08507.t1 | MTR_3g072810 | 29.487 | 156 | 101 | 5 | 1 | 153 | 3 | 152 | 6.30e-14 | 70.1 |
| MS.gene08507.t1 | MTR_2g437380 | 29.577 | 142 | 87 | 6 | 15 | 149 | 28 | 163 | 7.30e-14 | 70.1 |
| MS.gene08507.t1 | MTR_2g437380 | 38.667 | 75 | 46 | 0 | 153 | 227 | 282 | 356 | 2.73e-11 | 62.8 |
| MS.gene08507.t1 | MTR_2g068800 | 30.657 | 137 | 75 | 3 | 10 | 146 | 28 | 144 | 7.69e-14 | 69.3 |
| MS.gene08507.t1 | MTR_5g055820 | 31.613 | 155 | 101 | 5 | 1 | 153 | 9 | 160 | 7.84e-14 | 70.1 |
| MS.gene08507.t1 | MTR_5g048470 | 30.994 | 171 | 104 | 7 | 3 | 163 | 16 | 182 | 9.27e-14 | 69.7 |
| MS.gene08507.t1 | MTR_7g062600 | 31.206 | 141 | 92 | 4 | 15 | 153 | 27 | 164 | 1.12e-13 | 69.3 |
| MS.gene08507.t1 | MTR_8g028435 | 30.496 | 141 | 89 | 4 | 2 | 137 | 25 | 161 | 1.71e-13 | 68.9 |
| MS.gene08507.t1 | MTR_7g105070 | 29.710 | 138 | 96 | 1 | 10 | 146 | 30 | 167 | 2.50e-13 | 68.6 |
| MS.gene08507.t1 | MTR_7g056370 | 31.852 | 135 | 85 | 3 | 8 | 138 | 16 | 147 | 2.75e-13 | 67.0 |
| MS.gene08507.t1 | MTR_8g064200 | 29.677 | 155 | 101 | 5 | 3 | 153 | 16 | 166 | 2.90e-13 | 68.2 |
| MS.gene08507.t1 | MTR_8g064200 | 29.677 | 155 | 101 | 5 | 3 | 153 | 21 | 171 | 3.01e-13 | 68.2 |
| MS.gene08507.t1 | MTR_2g069210 | 35.644 | 101 | 63 | 1 | 39 | 137 | 64 | 164 | 3.34e-13 | 68.2 |
| MS.gene08507.t1 | MTR_1g034140 | 28.205 | 156 | 91 | 4 | 12 | 153 | 1 | 149 | 4.83e-13 | 67.8 |
| MS.gene08507.t1 | MTR_4g099380 | 30.597 | 134 | 83 | 3 | 8 | 137 | 142 | 269 | 5.90e-13 | 67.0 |
| MS.gene08507.t1 | MTR_8g041620 | 35.577 | 104 | 63 | 1 | 38 | 137 | 67 | 170 | 6.37e-13 | 67.4 |
| MS.gene08507.t1 | MTR_7g102720 | 34.545 | 110 | 67 | 3 | 38 | 146 | 36 | 141 | 6.81e-13 | 67.0 |
| MS.gene08507.t1 | MTR_5g055680 | 36.486 | 74 | 47 | 0 | 154 | 227 | 275 | 348 | 8.06e-13 | 67.0 |
| MS.gene08507.t1 | MTR_1g093110 | 30.693 | 101 | 68 | 1 | 39 | 137 | 70 | 170 | 1.44e-12 | 66.2 |
| MS.gene08507.t1 | MTR_5g059130 | 33.333 | 144 | 85 | 5 | 15 | 153 | 20 | 157 | 1.52e-12 | 66.2 |
| MS.gene08507.t1 | MTR_1g093140 | 27.778 | 126 | 89 | 1 | 14 | 137 | 48 | 173 | 1.60e-12 | 66.2 |
| MS.gene08507.t1 | MTR_3g072820 | 28.758 | 153 | 101 | 5 | 5 | 153 | 7 | 155 | 1.86e-12 | 65.9 |
| MS.gene08507.t1 | MTR_1g086550 | 33.028 | 109 | 65 | 2 | 29 | 137 | 10 | 110 | 1.99e-12 | 65.9 |
| MS.gene08507.t1 | MTR_8g009090 | 31.481 | 108 | 70 | 2 | 26 | 129 | 46 | 153 | 2.28e-12 | 65.9 |
| MS.gene08507.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 2.50e-12 | 65.5 |
| MS.gene08507.t1 | MTR_0009s0050 | 35.135 | 74 | 48 | 0 | 154 | 227 | 95 | 168 | 2.58e-12 | 63.5 |
| MS.gene08507.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 2.93e-12 | 65.5 |
| MS.gene08507.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 3.10e-12 | 65.1 |
| MS.gene08507.t1 | MTR_2g069190 | 29.104 | 134 | 83 | 2 | 39 | 170 | 68 | 191 | 3.30e-12 | 65.5 |
| MS.gene08507.t1 | MTR_5g048850 | 29.032 | 155 | 105 | 5 | 1 | 153 | 9 | 160 | 4.36e-12 | 64.3 |
| MS.gene08507.t1 | MTR_8g008930 | 30.769 | 117 | 76 | 3 | 26 | 137 | 46 | 162 | 4.70e-12 | 64.7 |
| MS.gene08507.t1 | MTR_2g069090 | 34.409 | 93 | 59 | 1 | 39 | 129 | 68 | 160 | 5.18e-12 | 64.7 |
| MS.gene08507.t1 | MTR_8g009160 | 29.464 | 112 | 76 | 1 | 39 | 147 | 60 | 171 | 5.73e-12 | 64.7 |
| MS.gene08507.t1 | MTR_5g048550 | 36.486 | 74 | 47 | 0 | 154 | 227 | 275 | 348 | 6.20e-12 | 64.3 |
| MS.gene08507.t1 | MTR_5g048550 | 31.579 | 133 | 82 | 4 | 11 | 140 | 20 | 146 | 1.50e-11 | 63.2 |
| MS.gene08507.t1 | MTR_5g048850 | 29.032 | 155 | 105 | 5 | 1 | 153 | 9 | 160 | 7.04e-12 | 64.3 |
| MS.gene08507.t1 | MTR_0009s0410 | 29.032 | 155 | 105 | 5 | 1 | 153 | 8 | 159 | 9.87e-12 | 61.6 |
| MS.gene08507.t1 | MTR_5g011250 | 27.389 | 157 | 97 | 7 | 9 | 152 | 13 | 165 | 1.02e-11 | 63.9 |
| MS.gene08507.t1 | MTR_0009s0050 | 35.135 | 74 | 48 | 0 | 154 | 227 | 177 | 250 | 1.13e-11 | 63.2 |
| MS.gene08507.t1 | MTR_0009s0050 | 35.135 | 74 | 48 | 0 | 154 | 227 | 177 | 250 | 1.19e-11 | 62.8 |
| MS.gene08507.t1 | MTR_5g048570 | 36.486 | 74 | 47 | 0 | 154 | 227 | 273 | 346 | 1.29e-11 | 63.5 |
| MS.gene08507.t1 | MTR_1g070110 | 41.892 | 74 | 42 | 1 | 81 | 153 | 4 | 77 | 1.32e-11 | 62.4 |
| MS.gene08507.t1 | MTR_8g063070 | 31.858 | 113 | 75 | 1 | 36 | 146 | 64 | 176 | 1.39e-11 | 63.5 |
| MS.gene08507.t1 | MTR_8g062600 | 31.373 | 102 | 68 | 1 | 38 | 137 | 66 | 167 | 1.54e-11 | 63.2 |
| MS.gene08507.t1 | MTR_2g072890 | 31.081 | 148 | 94 | 6 | 10 | 153 | 24 | 167 | 1.62e-11 | 63.2 |
| MS.gene08507.t1 | MTR_5g059140 | 30.556 | 144 | 91 | 4 | 15 | 153 | 18 | 157 | 1.76e-11 | 63.2 |
| MS.gene08507.t1 | MTR_2g437380 | 38.667 | 75 | 46 | 0 | 153 | 227 | 188 | 262 | 1.90e-11 | 62.4 |
| MS.gene08507.t1 | MTR_0009s0050 | 35.135 | 74 | 48 | 0 | 154 | 227 | 275 | 348 | 1.90e-11 | 63.2 |
| MS.gene08507.t1 | MTR_0009s0050 | 35.135 | 74 | 48 | 0 | 154 | 227 | 275 | 348 | 2.02e-11 | 62.8 |
| MS.gene08507.t1 | MTR_0328s0030 | 28.387 | 155 | 106 | 5 | 1 | 153 | 7 | 158 | 2.03e-11 | 62.8 |
| MS.gene08507.t1 | MTR_8g009110 | 29.126 | 103 | 70 | 1 | 38 | 137 | 59 | 161 | 2.47e-11 | 62.8 |
| MS.gene08507.t1 | MTR_7g056347 | 31.373 | 102 | 68 | 1 | 38 | 137 | 66 | 167 | 2.62e-11 | 62.8 |
| MS.gene08507.t1 | MTR_5g055900 | 33.784 | 74 | 49 | 0 | 154 | 227 | 275 | 348 | 2.87e-11 | 62.4 |
| MS.gene08507.t1 | MTR_2g072910 | 36.486 | 74 | 47 | 0 | 154 | 227 | 281 | 354 | 3.41e-11 | 62.4 |
| MS.gene08507.t1 | MTR_7g056393 | 29.412 | 102 | 70 | 1 | 38 | 137 | 66 | 167 | 4.33e-11 | 62.0 |
| MS.gene08507.t1 | MTR_1g034120 | 36.364 | 99 | 53 | 3 | 15 | 105 | 4 | 100 | 6.15e-11 | 61.6 |
| MS.gene08507.t1 | MTR_3g040410 | 32.773 | 119 | 71 | 3 | 39 | 153 | 6 | 119 | 6.26e-11 | 61.2 |
| MS.gene08507.t1 | MTR_1g034060 | 36.364 | 99 | 53 | 3 | 15 | 105 | 4 | 100 | 6.89e-11 | 61.2 |
| MS.gene08507.t1 | MTR_3g040430 | 42.647 | 68 | 35 | 1 | 39 | 102 | 6 | 73 | 7.76e-11 | 58.2 |
| MS.gene08507.t1 | MTR_5g055800 | 29.134 | 127 | 87 | 3 | 12 | 138 | 21 | 144 | 9.02e-11 | 60.8 |
| MS.gene08507.t1 | MTR_4g024660 | 29.060 | 117 | 71 | 2 | 38 | 152 | 66 | 172 | 9.29e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08507.t1 | AT4G10490 | 56.897 | 174 | 71 | 1 | 2 | 171 | 5 | 178 | 3.31e-65 | 206 |
| MS.gene08507.t1 | AT4G10490 | 55.844 | 77 | 32 | 1 | 153 | 227 | 269 | 345 | 1.27e-23 | 97.4 |
| MS.gene08507.t1 | AT4G10500 | 59.211 | 152 | 61 | 1 | 2 | 153 | 8 | 158 | 4.83e-62 | 197 |
| MS.gene08507.t1 | AT4G10500 | 53.947 | 76 | 34 | 1 | 153 | 227 | 271 | 346 | 2.37e-22 | 94.0 |
| MS.gene08507.t1 | AT5G24530 | 53.595 | 153 | 64 | 4 | 4 | 153 | 1 | 149 | 2.09e-52 | 172 |
| MS.gene08507.t1 | AT5G24530 | 45.333 | 75 | 38 | 1 | 154 | 225 | 264 | 338 | 2.05e-14 | 71.6 |
| MS.gene08507.t1 | AT2G36690 | 42.857 | 147 | 79 | 1 | 12 | 153 | 29 | 175 | 3.66e-33 | 123 |
| MS.gene08507.t1 | AT2G36690 | 42.857 | 147 | 79 | 1 | 12 | 153 | 29 | 175 | 3.66e-33 | 123 |
| MS.gene08507.t1 | AT3G60290 | 35.260 | 173 | 102 | 3 | 14 | 176 | 26 | 198 | 7.32e-31 | 116 |
| MS.gene08507.t1 | AT2G44800 | 33.333 | 177 | 108 | 3 | 10 | 176 | 22 | 198 | 1.74e-30 | 115 |
| MS.gene08507.t1 | AT5G07480 | 34.694 | 147 | 90 | 2 | 11 | 155 | 20 | 162 | 1.29e-26 | 105 |
| MS.gene08507.t1 | AT5G05600 | 32.886 | 149 | 93 | 4 | 10 | 153 | 33 | 179 | 1.24e-20 | 88.2 |
| MS.gene08507.t1 | AT5G05600 | 32.886 | 149 | 93 | 4 | 10 | 153 | 33 | 179 | 4.10e-20 | 87.8 |
| MS.gene08507.t1 | AT1G55290 | 34.328 | 134 | 83 | 3 | 15 | 146 | 37 | 167 | 3.39e-18 | 82.4 |
| MS.gene08507.t1 | AT3G55970 | 31.579 | 152 | 86 | 6 | 10 | 149 | 20 | 165 | 3.40e-18 | 81.6 |
| MS.gene08507.t1 | AT3G13610 | 31.159 | 138 | 91 | 2 | 10 | 146 | 33 | 167 | 3.49e-18 | 82.4 |
| MS.gene08507.t1 | AT3G55970 | 31.579 | 152 | 86 | 6 | 10 | 149 | 20 | 165 | 9.22e-18 | 81.3 |
| MS.gene08507.t1 | AT3G11180 | 34.000 | 150 | 90 | 6 | 10 | 153 | 62 | 208 | 1.00e-17 | 81.3 |
| MS.gene08507.t1 | AT3G51240 | 28.846 | 156 | 104 | 5 | 1 | 152 | 1 | 153 | 1.05e-17 | 80.9 |
| MS.gene08507.t1 | AT3G11180 | 34.000 | 150 | 90 | 6 | 10 | 153 | 62 | 208 | 1.31e-17 | 80.9 |
| MS.gene08507.t1 | AT1G06620 | 36.275 | 102 | 63 | 1 | 38 | 137 | 61 | 162 | 1.31e-17 | 79.7 |
| MS.gene08507.t1 | AT3G12900 | 33.333 | 138 | 90 | 2 | 10 | 146 | 28 | 164 | 1.91e-17 | 80.1 |
| MS.gene08507.t1 | AT1G06620 | 36.275 | 102 | 63 | 1 | 38 | 137 | 61 | 162 | 2.70e-17 | 80.1 |
| MS.gene08507.t1 | AT5G12270 | 33.333 | 141 | 84 | 5 | 11 | 147 | 29 | 163 | 7.02e-16 | 75.9 |
| MS.gene08507.t1 | AT5G08640 | 30.496 | 141 | 93 | 3 | 15 | 153 | 19 | 156 | 2.20e-15 | 74.3 |
| MS.gene08507.t1 | AT5G08640 | 30.496 | 141 | 93 | 3 | 15 | 153 | 19 | 156 | 2.20e-15 | 74.3 |
| MS.gene08507.t1 | AT1G78550 | 38.667 | 75 | 46 | 0 | 153 | 227 | 204 | 278 | 5.20e-15 | 72.8 |
| MS.gene08507.t1 | AT1G78550 | 38.667 | 75 | 46 | 0 | 153 | 227 | 282 | 356 | 1.01e-14 | 72.4 |
| MS.gene08507.t1 | AT1G78550 | 27.097 | 155 | 108 | 4 | 3 | 153 | 15 | 168 | 2.37e-11 | 62.8 |
| MS.gene08507.t1 | AT3G19000 | 27.778 | 162 | 94 | 4 | 12 | 153 | 1 | 159 | 1.38e-14 | 71.6 |
| MS.gene08507.t1 | AT3G19000 | 27.778 | 162 | 94 | 4 | 12 | 153 | 1 | 159 | 1.78e-14 | 71.6 |
| MS.gene08507.t1 | AT2G38240 | 29.787 | 141 | 94 | 4 | 15 | 153 | 23 | 160 | 2.19e-14 | 71.6 |
| MS.gene08507.t1 | AT5G63590 | 31.746 | 126 | 82 | 3 | 31 | 152 | 1 | 126 | 3.30e-14 | 70.9 |
| MS.gene08507.t1 | AT2G30830 | 32.710 | 107 | 69 | 1 | 34 | 137 | 49 | 155 | 4.90e-14 | 70.5 |
| MS.gene08507.t1 | AT1G17020 | 28.144 | 167 | 115 | 4 | 3 | 165 | 15 | 180 | 4.90e-14 | 70.5 |
| MS.gene08507.t1 | AT4G25300 | 29.940 | 167 | 112 | 4 | 3 | 165 | 14 | 179 | 9.17e-14 | 69.7 |
| MS.gene08507.t1 | AT1G03410 | 28.966 | 145 | 98 | 3 | 8 | 147 | 24 | 168 | 9.74e-14 | 69.7 |
| MS.gene08507.t1 | AT1G03410 | 28.966 | 145 | 98 | 3 | 8 | 147 | 61 | 205 | 1.16e-13 | 69.7 |
| MS.gene08507.t1 | AT3G61400 | 30.216 | 139 | 82 | 3 | 10 | 137 | 31 | 165 | 1.40e-13 | 68.9 |
| MS.gene08507.t1 | AT3G61400 | 30.216 | 139 | 82 | 3 | 10 | 137 | 31 | 165 | 2.28e-13 | 68.6 |
| MS.gene08507.t1 | AT1G77330 | 32.432 | 111 | 70 | 2 | 38 | 148 | 2 | 107 | 4.72e-13 | 67.4 |
| MS.gene08507.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 5.92e-13 | 67.0 |
| MS.gene08507.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 6.14e-13 | 67.4 |
| MS.gene08507.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 6.91e-13 | 67.4 |
| MS.gene08507.t1 | AT1G04350 | 30.469 | 128 | 86 | 3 | 12 | 137 | 30 | 156 | 9.14e-13 | 67.0 |
| MS.gene08507.t1 | AT3G19010 | 26.829 | 164 | 97 | 5 | 37 | 184 | 26 | 182 | 2.32e-12 | 65.5 |
| MS.gene08507.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 3.78e-12 | 65.1 |
| MS.gene08507.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 4.25e-12 | 64.7 |
| MS.gene08507.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 5.91e-12 | 64.7 |
| MS.gene08507.t1 | AT1G17010 | 28.846 | 156 | 105 | 5 | 3 | 153 | 15 | 169 | 6.41e-12 | 64.3 |
| MS.gene08507.t1 | AT5G63580 | 32.500 | 120 | 70 | 4 | 38 | 153 | 18 | 130 | 1.01e-11 | 62.8 |
| MS.gene08507.t1 | AT5G63580 | 32.500 | 120 | 70 | 4 | 38 | 153 | 18 | 130 | 1.02e-11 | 63.2 |
| MS.gene08507.t1 | AT1G02400 | 32.692 | 104 | 63 | 2 | 34 | 137 | 19 | 115 | 1.14e-11 | 63.5 |
| MS.gene08507.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.15e-11 | 63.5 |
| MS.gene08507.t1 | AT1G02400 | 32.692 | 104 | 63 | 2 | 34 | 137 | 19 | 115 | 1.23e-11 | 63.2 |
| MS.gene08507.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.28e-11 | 63.5 |
| MS.gene08507.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.28e-11 | 63.5 |
| MS.gene08507.t1 | AT5G63595 | 29.545 | 132 | 81 | 5 | 26 | 153 | 9 | 132 | 1.32e-11 | 63.2 |
| MS.gene08507.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 38 | 129 | 63 | 157 | 1.42e-11 | 63.2 |
| MS.gene08507.t1 | AT1G03400 | 27.273 | 110 | 74 | 1 | 38 | 147 | 55 | 158 | 1.45e-11 | 63.5 |
| MS.gene08507.t1 | AT5G43935 | 29.167 | 168 | 97 | 7 | 36 | 187 | 16 | 177 | 1.53e-11 | 63.2 |
| MS.gene08507.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 38 | 129 | 63 | 157 | 1.56e-11 | 63.5 |
| MS.gene08507.t1 | AT1G06645 | 33.010 | 103 | 66 | 1 | 38 | 137 | 76 | 178 | 1.72e-11 | 63.2 |
| MS.gene08507.t1 | AT2G25450 | 33.684 | 95 | 61 | 1 | 39 | 131 | 55 | 149 | 1.88e-11 | 63.2 |
| MS.gene08507.t1 | AT1G03400 | 25.926 | 135 | 85 | 2 | 38 | 172 | 55 | 174 | 2.12e-11 | 63.2 |
| MS.gene08507.t1 | AT4G16330 | 29.752 | 121 | 75 | 4 | 38 | 153 | 66 | 181 | 2.58e-11 | 62.8 |
| MS.gene08507.t1 | AT5G63600 | 27.350 | 117 | 74 | 4 | 39 | 153 | 33 | 140 | 2.74e-11 | 62.4 |
| MS.gene08507.t1 | AT5G63600 | 27.350 | 117 | 74 | 4 | 39 | 153 | 33 | 140 | 2.83e-11 | 62.4 |
| MS.gene08507.t1 | AT4G25420 | 34.444 | 90 | 54 | 2 | 14 | 101 | 39 | 125 | 6.01e-11 | 61.6 |
| MS.gene08507.t1 | AT4G25420 | 29.167 | 120 | 79 | 3 | 14 | 131 | 39 | 154 | 7.32e-11 | 61.2 |
| MS.gene08507.t1 | AT5G51810 | 28.346 | 127 | 85 | 3 | 8 | 134 | 35 | 155 | 9.65e-11 | 61.2 |
Find 49 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCAACCCACCTTCTTTC+AGG | 0.174684 | 8.1:-76292670 | MS.gene08507:intron |
| GCACATGCATGTCAAAATTA+TGG | 0.232786 | 8.1:-76293310 | MS.gene08507:CDS |
| ATGAATACTACAACAAATTC+TGG | 0.275217 | 8.1:-76291536 | MS.gene08507:CDS |
| GAAAGTCTAGTTGTCTTTAA+TGG | 0.283274 | 8.1:+76292788 | None:intergenic |
| AATTTGAAGGGACATGATTA+AGG | 0.284326 | 8.1:+76293455 | None:intergenic |
| GACATGCATGTGCAATCTTT+TGG | 0.333511 | 8.1:+76293320 | None:intergenic |
| AGACCGAGAAAGTTTCAAAT+TGG | 0.357191 | 8.1:-76292748 | MS.gene08507:CDS |
| ATCCCTACCATTGATCTTCA+AGG | 0.375888 | 8.1:-76293373 | MS.gene08507:CDS |
| ATGTTATTTATAACCTCCTC+TGG | 0.376503 | 8.1:+76292878 | None:intergenic |
| TCTCCAATTTGAAACTTTCT+CGG | 0.381665 | 8.1:+76292745 | None:intergenic |
| TCAAATTTCATTAGACCCAT+TGG | 0.418848 | 8.1:-76293439 | MS.gene08507:CDS |
| ATTTGAAGGGACATGATTAA+GGG | 0.441945 | 8.1:+76293456 | None:intergenic |
| GTGAATTGAAGTTGAAGATC+TGG | 0.443492 | 8.1:+76293409 | None:intergenic |
| TACAACAAATTCTGGAATAG+AGG | 0.452603 | 8.1:-76291528 | MS.gene08507:CDS |
| CTGAAAGAAGGTGGGTTGGC+AGG | 0.457585 | 8.1:+76292671 | None:intergenic |
| ATGGGTCTAATGAAATTTGA+AGG | 0.463124 | 8.1:+76293442 | None:intergenic |
| AACCTGTGTGGACATGTTCA+AGG | 0.478953 | 8.1:-76291493 | MS.gene08507:CDS |
| TTGAAGATTATGTTCATGAA+TGG | 0.482362 | 8.1:-76292694 | MS.gene08507:CDS |
| CTGAACGATTTGATGCATCA+AGG | 0.492517 | 8.1:+76293350 | None:intergenic |
| TTGTCTATGAGTTGAGGAGC+TGG | 0.509813 | 8.1:+76291594 | None:intergenic |
| GCTGGTCTTATGATTGCATC+TGG | 0.516799 | 8.1:+76291612 | None:intergenic |
| AAGATCTGGACGATCACCAA+TGG | 0.532251 | 8.1:+76293423 | None:intergenic |
| TGAAGGGACATGATTAAGGG+TGG | 0.539972 | 8.1:+76293459 | None:intergenic |
| ATCAAGGCCTTGAAGATCAA+TGG | 0.540205 | 8.1:+76293366 | None:intergenic |
| TGGTTAATAGTGAGAAAGAG+AGG | 0.549798 | 8.1:-76291665 | MS.gene08507:CDS |
| CTTATGATTGCATCTGGTGA+TGG | 0.559599 | 8.1:+76291618 | None:intergenic |
| CATGATTAAGGGTGGAAACA+AGG | 0.560953 | 8.1:+76293467 | None:intergenic |
| AGATCTGGACGATCACCAAT+GGG | 0.565354 | 8.1:+76293424 | None:intergenic |
| TGATCTTTGTCTATGAGTTG+AGG | 0.571086 | 8.1:+76291588 | None:intergenic |
| GGTCTTCACATTGAAACTAG+TGG | 0.574098 | 8.1:+76292766 | None:intergenic |
| AGGCCTTGAAGATCAATGGT+AGG | 0.575623 | 8.1:+76293370 | None:intergenic |
| TATGGCCACAATGAAGCCAT+TGG | 0.577357 | 8.1:-76293497 | None:intergenic |
| GGCCTTGAAGATCAATGGTA+GGG | 0.578631 | 8.1:+76293371 | None:intergenic |
| ATGGTAGGGATAGAATCTGT+GGG | 0.581801 | 8.1:+76293385 | None:intergenic |
| GAGTGTGCTGCATCGAGCAT+TGG | 0.582659 | 8.1:-76291685 | MS.gene08507:CDS |
| GTACCTGAAAGAAGGTGGGT+TGG | 0.586591 | 8.1:+76292667 | None:intergenic |
| GAAACAAGGTCGGTTACCAA+TGG | 0.597873 | 8.1:+76293481 | None:intergenic |
| TGGGTCTAATGAAATTTGAA+GGG | 0.604544 | 8.1:+76293443 | None:intergenic |
| AATGGTAGGGATAGAATCTG+TGG | 0.616018 | 8.1:+76293384 | None:intergenic |
| TCATGAACATAATCTTCAAG+AGG | 0.623180 | 8.1:+76292698 | None:intergenic |
| AACCTTGAACATGTCCACAC+AGG | 0.626453 | 8.1:+76291491 | None:intergenic |
| ATTAAGGGTGGAAACAAGGT+CGG | 0.632454 | 8.1:+76293471 | None:intergenic |
| TGGACAGTAGAACGTTGGAA+TGG | 0.641192 | 8.1:+76291638 | None:intergenic |
| GGTGATGGACAGTAGAACGT+TGG | 0.656999 | 8.1:+76291633 | None:intergenic |
| TGTGAATCATGGAGTTCCAG+AGG | 0.659619 | 8.1:-76292894 | MS.gene08507:CDS |
| GAATCATGGAGTTCCAGAGG+AGG | 0.684834 | 8.1:-76292891 | MS.gene08507:CDS |
| TGGTAGGGATAGAATCTGTG+GGG | 0.714886 | 8.1:+76293386 | None:intergenic |
| GGTAGGGATAGAATCTGTGG+GGG | 0.730114 | 8.1:+76293387 | None:intergenic |
| ACTTTCGAAAGAAACCTGTG+TGG | 0.772070 | 8.1:-76291505 | MS.gene08507:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATATTAAATTTAACAT+CGG | - | chr8.1:76293088-76293107 | MS.gene08507:intron | 10.0% |
| !! | AATCGAAAATAATATATTTC+CGG | - | chr8.1:76292434-76292453 | MS.gene08507:intron | 15.0% |
| !! | TTAATAAAATAAACAACAAG+TGG | + | chr8.1:76291863-76291882 | None:intergenic | 15.0% |
| !!! | GGATTTTGTTTTTTTATTAT+AGG | + | chr8.1:76293175-76293194 | None:intergenic | 15.0% |
| !! | ACAATGAAAAGATTATCATA+AGG | + | chr8.1:76292531-76292550 | None:intergenic | 20.0% |
| !! | CATAAAAAACCTATATTTCA+CGG | + | chr8.1:76292413-76292432 | None:intergenic | 20.0% |
| !! | TATTAAATTTAACATCGGAA+CGG | - | chr8.1:76293093-76293112 | MS.gene08507:intron | 20.0% |
| !! | TGAATAAATTATAAGAACTC+AGG | + | chr8.1:76293196-76293215 | None:intergenic | 20.0% |
| !! | TTGTAAACATTTCATATGTT+GGG | + | chr8.1:76291810-76291829 | None:intergenic | 20.0% |
| !!! | AATTTGAAATTAAACTGATG+TGG | + | chr8.1:76291952-76291971 | None:intergenic | 20.0% |
| !!! | ATTATAGGTCTTGTAATATA+CGG | + | chr8.1:76293160-76293179 | None:intergenic | 20.0% |
| !!! | TATCATAAGGATTTAAGTTA+TGG | + | chr8.1:76292518-76292537 | None:intergenic | 20.0% |
| !!! | TTTTCCTTGTAAGAATAATT+TGG | + | chr8.1:76293066-76293085 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGATTGTGAATCA+TGG | - | chr8.1:76292070-76292089 | MS.gene08507:intron | 20.0% |
| ! | AATACCTTCATAGTCAATAT+TGG | - | chr8.1:76292847-76292866 | MS.gene08507:CDS | 25.0% |
| ! | AGTATAGATTGTATAAATGC+CGG | + | chr8.1:76292456-76292475 | None:intergenic | 25.0% |
| ! | ATGAATACTACAACAAATTC+TGG | - | chr8.1:76293439-76293458 | MS.gene08507:CDS | 25.0% |
| ! | GAATCCAAATTATTCTTACA+AGG | - | chr8.1:76293059-76293078 | MS.gene08507:intron | 25.0% |
| ! | GTTGTAAACATTTCATATGT+TGG | + | chr8.1:76291811-76291830 | None:intergenic | 25.0% |
| ! | TGTAAACATTTCATATGTTG+GGG | + | chr8.1:76291809-76291828 | None:intergenic | 25.0% |
| ! | TTGAAGATTATGTTCATGAA+TGG | - | chr8.1:76292281-76292300 | MS.gene08507:intron | 25.0% |
| !! | AACAAAATGGTAATGACATT+TGG | + | chr8.1:76292760-76292779 | None:intergenic | 25.0% |
| !! | AATATCAGAAAGTTTAGGTT+TGG | - | chr8.1:76292621-76292640 | MS.gene08507:intron | 25.0% |
| !! | ACAAAATGGTAATGACATTT+GGG | + | chr8.1:76292759-76292778 | None:intergenic | 25.0% |
| !! | CATTTTGTTGCAAAATAATG+TGG | - | chr8.1:76292771-76292790 | MS.gene08507:CDS | 25.0% |
| !! | TTTTTCATTCTTTCACTTTC+TGG | + | chr8.1:76292154-76292173 | None:intergenic | 25.0% |
| !!! | ATATTGACTATGAAGGTATT+AGG | + | chr8.1:76292847-76292866 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTACCTGAAAGA+AGG | + | chr8.1:76292319-76292338 | None:intergenic | 25.0% |
| !!! | CACATTATTTTGCAACAAAA+TGG | + | chr8.1:76292773-76292792 | None:intergenic | 25.0% |
| !!! | TTCATTGTGTTTTATTAGAG+AGG | - | chr8.1:76292543-76292562 | MS.gene08507:intron | 25.0% |
| AATTTGAAGGGACATGATTA+AGG | + | chr8.1:76291523-76291542 | None:intergenic | 30.0% | |
| ATGGGTCTAATGAAATTTGA+AGG | + | chr8.1:76291536-76291555 | None:intergenic | 30.0% | |
| ATTTGAAGGGACATGATTAA+GGG | + | chr8.1:76291522-76291541 | None:intergenic | 30.0% | |
| CAATTAGATCCGTGAAATAT+AGG | - | chr8.1:76292401-76292420 | MS.gene08507:intron | 30.0% | |
| GAAAGTCTAGTTGTCTTTAA+TGG | + | chr8.1:76292190-76292209 | None:intergenic | 30.0% | |
| TCAAATTTCATTAGACCCAT+TGG | - | chr8.1:76291536-76291555 | MS.gene08507:CDS | 30.0% | |
| TCATGAACATAATCTTCAAG+AGG | + | chr8.1:76292280-76292299 | None:intergenic | 30.0% | |
| TGGGTCTAATGAAATTTGAA+GGG | + | chr8.1:76291535-76291554 | None:intergenic | 30.0% | |
| TTGACTGAAATACCTGAATT+TGG | + | chr8.1:76292876-76292895 | None:intergenic | 30.0% | |
| ! | AGAAAGTTTAGGTTTGGAAA+AGG | - | chr8.1:76292627-76292646 | MS.gene08507:intron | 30.0% |
| ! | ATGTTATTTATAACCTCCTC+TGG | + | chr8.1:76292100-76292119 | None:intergenic | 30.0% |
| ! | TCTCCAATTTGAAACTTTCT+CGG | + | chr8.1:76292233-76292252 | None:intergenic | 30.0% |
| ! | TTTAAGTTATGGTCGAAATG+TGG | + | chr8.1:76292507-76292526 | None:intergenic | 30.0% |
| !! | TACAACAAATTCTGGAATAG+AGG | - | chr8.1:76293447-76293466 | MS.gene08507:CDS | 30.0% |
| AAGTCCTTAAGGATGGTAAA+TGG | - | chr8.1:76292803-76292822 | MS.gene08507:CDS | 35.0% | |
| AATTTAACATCGGAACGGAA+AGG | - | chr8.1:76293098-76293117 | MS.gene08507:intron | 35.0% | |
| ACATGAACGTTACAGTTTAC+AGG | + | chr8.1:76292966-76292985 | None:intergenic | 35.0% | |
| AGACCGAGAAAGTTTCAAAT+TGG | - | chr8.1:76292227-76292246 | MS.gene08507:intron | 35.0% | |
| AGTATAGCAGACAATTGAGA+AGG | - | chr8.1:76292575-76292594 | MS.gene08507:intron | 35.0% | |
| AGTCCTTAAGGATGGTAAAT+GGG | - | chr8.1:76292804-76292823 | MS.gene08507:CDS | 35.0% | |
| ATATGCATGCATGTTGATGT+GGG | - | chr8.1:76293234-76293253 | MS.gene08507:intron | 35.0% | |
| CATGAACGTTACAGTTTACA+GGG | + | chr8.1:76292965-76292984 | None:intergenic | 35.0% | |
| GAAAGTTGAAAATTGCGAGT+TGG | - | chr8.1:76291775-76291794 | MS.gene08507:intron | 35.0% | |
| GAGGCAATATCAGAAAGTTT+AGG | - | chr8.1:76292616-76292635 | MS.gene08507:intron | 35.0% | |
| GATTACATAAACAACGCACT+TGG | - | chr8.1:76292649-76292668 | MS.gene08507:intron | 35.0% | |
| GCACATGCATGTCAAAATTA+TGG | - | chr8.1:76291665-76291684 | MS.gene08507:CDS | 35.0% | |
| GTGAATTGAAGTTGAAGATC+TGG | + | chr8.1:76291569-76291588 | None:intergenic | 35.0% | |
| TAGCCTAGCGTAAAATTCAT+AGG | - | chr8.1:76291742-76291761 | MS.gene08507:intron | 35.0% | |
| TATATGCATGCATGTTGATG+TGG | - | chr8.1:76293233-76293252 | MS.gene08507:intron | 35.0% | |
| TATTGCACCATGAAGTTGTA+GGG | - | chr8.1:76291992-76292011 | MS.gene08507:intron | 35.0% | |
| TGATCTTTGTCTATGAGTTG+AGG | + | chr8.1:76293390-76293409 | None:intergenic | 35.0% | |
| TGGTTAATAGTGAGAAAGAG+AGG | - | chr8.1:76293310-76293329 | MS.gene08507:CDS | 35.0% | |
| TTACCCATTTACCATCCTTA+AGG | + | chr8.1:76292810-76292829 | None:intergenic | 35.0% | |
| TTATTGCACCATGAAGTTGT+AGG | - | chr8.1:76291991-76292010 | MS.gene08507:intron | 35.0% | |
| TTGTTGCAAAATAATGTGGC+TGG | - | chr8.1:76292775-76292794 | MS.gene08507:CDS | 35.0% | |
| ! | ATGCCTATGAATTTTACGCT+AGG | + | chr8.1:76291748-76291767 | None:intergenic | 35.0% |
| ! | CAATATTGGTGACCAAATTC+AGG | - | chr8.1:76292861-76292880 | MS.gene08507:CDS | 35.0% |
| ! | GTCACCAATATTGACTATGA+AGG | + | chr8.1:76292854-76292873 | None:intergenic | 35.0% |
| ! | TGTTGATGTGGGTTTGAAAT+AGG | - | chr8.1:76293245-76293264 | MS.gene08507:intron | 35.0% |
| ! | TTTTGTACCTGAAAGAAGGT+GGG | + | chr8.1:76292315-76292334 | None:intergenic | 35.0% |
| ! | TTTTTGTACCTGAAAGAAGG+TGG | + | chr8.1:76292316-76292335 | None:intergenic | 35.0% |
| !! | ACTATGAAGGTATTAGGAAC+GGG | + | chr8.1:76292841-76292860 | None:intergenic | 35.0% |
| !! | GACTATGAAGGTATTAGGAA+CGG | + | chr8.1:76292842-76292861 | None:intergenic | 35.0% |
| AACGTTACAGTTTACAGGGA+CGG | + | chr8.1:76292961-76292980 | None:intergenic | 40.0% | |
| AATGGTAGGGATAGAATCTG+TGG | + | chr8.1:76291594-76291613 | None:intergenic | 40.0% | |
| ACTTTCGAAAGAAACCTGTG+TGG | - | chr8.1:76293470-76293489 | MS.gene08507:CDS | 40.0% | |
| ATCAAGGCCTTGAAGATCAA+TGG | + | chr8.1:76291612-76291631 | None:intergenic | 40.0% | |
| ATCCCTACCATTGATCTTCA+AGG | - | chr8.1:76291602-76291621 | MS.gene08507:CDS | 40.0% | |
| ATGGTAGGGATAGAATCTGT+GGG | + | chr8.1:76291593-76291612 | None:intergenic | 40.0% | |
| ATTAAGGGTGGAAACAAGGT+CGG | + | chr8.1:76291507-76291526 | None:intergenic | 40.0% | |
| ATTGCACCATGAAGTTGTAG+GGG | - | chr8.1:76291993-76292012 | MS.gene08507:intron | 40.0% | |
| CATGATTAAGGGTGGAAACA+AGG | + | chr8.1:76291511-76291530 | None:intergenic | 40.0% | |
| CTGAACGATTTGATGCATCA+AGG | + | chr8.1:76291628-76291647 | None:intergenic | 40.0% | |
| CTTATGATTGCATCTGGTGA+TGG | + | chr8.1:76293360-76293379 | None:intergenic | 40.0% | |
| GGTCTTCACATTGAAACTAG+TGG | + | chr8.1:76292212-76292231 | None:intergenic | 40.0% | |
| TGTCAGCTGAGTCATGTTTA+CGG | - | chr8.1:76292983-76293002 | MS.gene08507:intron | 40.0% | |
| TTAGATCCCCTACAACTTCA+TGG | + | chr8.1:76292002-76292021 | None:intergenic | 40.0% | |
| ! | GACATGCATGTGCAATCTTT+TGG | + | chr8.1:76291658-76291677 | None:intergenic | 40.0% |
| !! | AACGGAAAGGTGCTAATTTG+TGG | - | chr8.1:76293111-76293130 | MS.gene08507:intron | 40.0% |
| !! | ACGGAAAGGTGCTAATTTGT+GGG | - | chr8.1:76293112-76293131 | MS.gene08507:intron | 40.0% |
| !! | CTATGAAGGTATTAGGAACG+GGG | + | chr8.1:76292840-76292859 | None:intergenic | 40.0% |
| AACCTGTGTGGACATGTTCA+AGG | - | chr8.1:76293482-76293501 | MS.gene08507:CDS | 45.0% | |
| AACCTTGAACATGTCCACAC+AGG | + | chr8.1:76293487-76293506 | None:intergenic | 45.0% | |
| AAGATCTGGACGATCACCAA+TGG | + | chr8.1:76291555-76291574 | None:intergenic | 45.0% | |
| AGATCTGGACGATCACCAAT+GGG | + | chr8.1:76291554-76291573 | None:intergenic | 45.0% | |
| AGGCCTTGAAGATCAATGGT+AGG | + | chr8.1:76291608-76291627 | None:intergenic | 45.0% | |
| CCTGAACCAGACCTAACATA+TGG | - | chr8.1:76292715-76292734 | MS.gene08507:CDS | 45.0% | |
| GAAACAAGGTCGGTTACCAA+TGG | + | chr8.1:76291497-76291516 | None:intergenic | 45.0% | |
| GAGCTGGCAAACCATATGTT+AGG | + | chr8.1:76292729-76292748 | None:intergenic | 45.0% | |
| GGCAAACCATATGTTAGGTC+TGG | + | chr8.1:76292724-76292743 | None:intergenic | 45.0% | |
| GGCCTTGAAGATCAATGGTA+GGG | + | chr8.1:76291607-76291626 | None:intergenic | 45.0% | |
| GGTTTGCAAGTCCTTAAGGA+TGG | - | chr8.1:76292796-76292815 | MS.gene08507:CDS | 45.0% | |
| TGAAGGGACATGATTAAGGG+TGG | + | chr8.1:76291519-76291538 | None:intergenic | 45.0% | |
| TGGACAGTAGAACGTTGGAA+TGG | + | chr8.1:76293340-76293359 | None:intergenic | 45.0% | |
| TGGTAGGGATAGAATCTGTG+GGG | + | chr8.1:76291592-76291611 | None:intergenic | 45.0% | |
| TGTGAATCATGGAGTTCCAG+AGG | - | chr8.1:76292081-76292100 | MS.gene08507:intron | 45.0% | |
| ! | CCATATGTTAGGTCTGGTTC+AGG | + | chr8.1:76292718-76292737 | None:intergenic | 45.0% |
| ! | GCTAGCATTGAGATTGCTTG+AGG | - | chr8.1:76292597-76292616 | MS.gene08507:intron | 45.0% |
| ! | TTAGGTCTGGTTCAGGACAT+GGG | + | chr8.1:76292711-76292730 | None:intergenic | 45.0% |
| ! | TTGTCTATGAGTTGAGGAGC+TGG | + | chr8.1:76293384-76293403 | None:intergenic | 45.0% |
| !! | GCTGGTCTTATGATTGCATC+TGG | + | chr8.1:76293366-76293385 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTCTTTTAAAAT+AGG | - | chr8.1:76292916-76292935 | MS.gene08507:intron | 5.0% |
| AACAACGCACTTGGCAAGCA+TGG | - | chr8.1:76292658-76292677 | MS.gene08507:intron | 50.0% | |
| ACAACGCACTTGGCAAGCAT+GGG | - | chr8.1:76292659-76292678 | MS.gene08507:intron | 50.0% | |
| ACATTTGGGTCAGCATGAGC+TGG | + | chr8.1:76292745-76292764 | None:intergenic | 50.0% | |
| GAATCATGGAGTTCCAGAGG+AGG | - | chr8.1:76292084-76292103 | MS.gene08507:intron | 50.0% | |
| GGGACGGCGTTCAATGAATA+TGG | + | chr8.1:76292945-76292964 | None:intergenic | 50.0% | |
| GGTAGGGATAGAATCTGTGG+GGG | + | chr8.1:76291591-76291610 | None:intergenic | 50.0% | |
| GTACCTGAAAGAAGGTGGGT+TGG | + | chr8.1:76292311-76292330 | None:intergenic | 50.0% | |
| ! | GTTAGGTCTGGTTCAGGACA+TGG | + | chr8.1:76292712-76292731 | None:intergenic | 50.0% |
| ! | TAGGTCTGGTTCAGGACATG+GGG | + | chr8.1:76292710-76292729 | None:intergenic | 50.0% |
| !! | GGCTGGTTTGCAAGTCCTTA+AGG | - | chr8.1:76292792-76292811 | MS.gene08507:CDS | 50.0% |
| !! | GGTGATGGACAGTAGAACGT+TGG | + | chr8.1:76293345-76293364 | None:intergenic | 50.0% |
| CTGCCAACCCACCTTCTTTC+AGG | - | chr8.1:76292305-76292324 | MS.gene08507:intron | 55.0% | |
| GAGTGTGCTGCATCGAGCAT+TGG | - | chr8.1:76293290-76293309 | MS.gene08507:intron | 55.0% | |
| TGGCAAGCATGGGCAACACA+TGG | - | chr8.1:76292669-76292688 | MS.gene08507:intron | 55.0% | |
| ! | AGGTCTGGTTCAGGACATGG+GGG | + | chr8.1:76292709-76292728 | None:intergenic | 55.0% |
| !! | CTGAAAGAAGGTGGGTTGGC+AGG | + | chr8.1:76292307-76292326 | None:intergenic | 55.0% |
| ! | GGTCTGGTTCAGGACATGGG+GGG | + | chr8.1:76292708-76292727 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 76291488 | 76293509 | 76291488 | ID=MS.gene08507 |
| chr8.1 | mRNA | 76291488 | 76293509 | 76291488 | ID=MS.gene08507.t1;Parent=MS.gene08507 |
| chr8.1 | exon | 76293300 | 76293509 | 76293300 | ID=MS.gene08507.t1.exon1;Parent=MS.gene08507.t1 |
| chr8.1 | CDS | 76293300 | 76293509 | 76293300 | ID=cds.MS.gene08507.t1;Parent=MS.gene08507.t1 |
| chr8.1 | exon | 76292671 | 76292918 | 76292671 | ID=MS.gene08507.t1.exon2;Parent=MS.gene08507.t1 |
| chr8.1 | CDS | 76292671 | 76292918 | 76292671 | ID=cds.MS.gene08507.t1;Parent=MS.gene08507.t1 |
| chr8.1 | exon | 76291488 | 76291713 | 76291488 | ID=MS.gene08507.t1.exon3;Parent=MS.gene08507.t1 |
| chr8.1 | CDS | 76291488 | 76291713 | 76291488 | ID=cds.MS.gene08507.t1;Parent=MS.gene08507.t1 |
| Gene Sequence |
| Protein sequence |
