AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063125

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063125.t1 MTR_3g117420 95.198 354 16 1 5 358 2 354 0.0 699
MS.gene063125.t1 MTR_8g074050 76.420 352 82 1 7 358 4 354 0.0 573
MS.gene063125.t1 MTR_8g074070 75.852 352 84 1 7 358 4 354 0.0 563
MS.gene063125.t1 MTR_8g074070 72.159 352 78 2 7 358 4 335 0.0 527
MS.gene063125.t1 MTR_3g117485 67.908 349 104 5 14 358 9 353 2.78e-167 471
MS.gene063125.t1 MTR_3g117485 68.705 278 83 3 83 358 6 281 5.42e-138 394
MS.gene063125.t1 MTR_4g116010 50.435 345 158 4 16 358 15 348 8.44e-121 353
MS.gene063125.t1 MTR_4g115990 46.302 311 140 4 40 350 36 319 9.58e-91 275
MS.gene063125.t1 MTR_3g026150 41.441 333 188 4 13 343 19 346 8.78e-86 264
MS.gene063125.t1 MTR_2g437380 39.776 357 202 7 8 358 7 356 5.71e-80 249
MS.gene063125.t1 MTR_5g055900 38.372 344 203 4 17 358 12 348 2.11e-79 247
MS.gene063125.t1 MTR_2g072910 39.244 344 202 3 17 358 16 354 2.25e-78 244
MS.gene063125.t1 MTR_5g055680 40.523 306 177 3 55 358 46 348 2.47e-77 242
MS.gene063125.t1 MTR_7g062580 40.129 309 175 5 30 336 32 332 3.02e-77 242
MS.gene063125.t1 MTR_5g048570 36.337 344 208 4 17 358 12 346 5.18e-77 241
MS.gene063125.t1 MTR_5g048470 38.889 306 183 3 55 358 52 355 5.20e-77 241
MS.gene063125.t1 MTR_2g072890 38.438 333 193 5 17 346 16 339 2.20e-76 239
MS.gene063125.t1 MTR_5g055820 38.689 305 183 2 56 358 47 349 5.63e-76 238
MS.gene063125.t1 MTR_8g064200 38.926 298 178 3 55 350 51 346 1.72e-75 237
MS.gene063125.t1 MTR_8g064200 38.235 306 185 3 55 358 56 359 2.33e-75 237
MS.gene063125.t1 MTR_0009s0050 36.812 345 207 5 17 358 12 348 7.74e-74 233
MS.gene063125.t1 MTR_7g062550 38.507 335 190 8 30 358 37 361 8.43e-74 233
MS.gene063125.t1 MTR_0009s0050 36.337 344 210 4 17 358 12 348 9.97e-74 233
MS.gene063125.t1 MTR_7g062570 38.206 301 177 4 56 355 55 347 3.74e-73 231
MS.gene063125.t1 MTR_5g048550 38.235 306 184 3 55 358 46 348 6.66e-73 230
MS.gene063125.t1 MTR_5g055690 35.211 355 220 5 7 358 2 349 2.23e-72 229
MS.gene063125.t1 MTR_5g048850 35.465 344 213 4 17 358 12 348 4.51e-72 228
MS.gene063125.t1 MTR_1g033810 39.583 288 172 2 55 342 46 331 2.24e-71 226
MS.gene063125.t1 MTR_7g062600 35.329 334 203 7 30 358 28 353 2.47e-71 226
MS.gene063125.t1 MTR_2g437380 43.726 263 144 3 99 358 1 262 3.26e-70 221
MS.gene063125.t1 MTR_7g063730 35.621 306 192 3 55 358 63 365 1.27e-69 223
MS.gene063125.t1 MTR_7g068650 37.809 283 172 2 54 332 52 334 8.34e-69 220
MS.gene063125.t1 MTR_0009s0480 34.188 351 218 5 12 358 6 347 1.49e-67 216
MS.gene063125.t1 MTR_0328s0030 36.103 349 212 5 13 358 6 346 1.49e-67 216
MS.gene063125.t1 MTR_5g048740 35.838 346 210 4 17 358 10 347 1.64e-67 216
MS.gene063125.t1 MTR_7g045650 42.798 243 136 2 51 293 55 294 2.66e-67 215
MS.gene063125.t1 MTR_3g026150 43.019 265 146 3 17 281 23 282 3.54e-67 213
MS.gene063125.t1 MTR_4g015790 36.207 290 181 2 50 335 56 345 5.83e-67 216
MS.gene063125.t1 MTR_5g082750 37.234 282 172 3 55 332 48 328 2.81e-64 208
MS.gene063125.t1 MTR_3g026150 41.841 239 136 2 107 343 6 243 5.89e-64 204
MS.gene063125.t1 MTR_3g070860 36.014 286 180 2 50 332 44 329 6.72e-64 207
MS.gene063125.t1 MTR_2g072910 41.045 268 153 2 17 284 16 278 8.68e-64 204
MS.gene063125.t1 MTR_5g059130 32.727 330 211 6 10 336 1 322 1.40e-63 206
MS.gene063125.t1 MTR_3g072820 35.135 296 181 6 52 343 38 326 2.37e-62 202
MS.gene063125.t1 MTR_5g055800 34.426 305 194 4 56 358 47 347 5.78e-61 199
MS.gene063125.t1 MTR_5g011250 33.535 331 205 8 15 334 5 331 7.33e-61 199
MS.gene063125.t1 MTR_3g092890 36.610 295 179 5 55 348 37 324 1.10e-60 198
MS.gene063125.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 5.28e-60 194
MS.gene063125.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 7.14e-60 194
MS.gene063125.t1 MTR_5g048850 37.218 266 160 3 17 282 12 270 8.69e-58 189
MS.gene063125.t1 MTR_3g072810 34.050 279 177 5 74 348 53 328 2.84e-57 189
MS.gene063125.t1 MTR_5g055690 36.957 276 166 4 7 281 2 270 7.33e-57 186
MS.gene063125.t1 MTR_5g059140 34.164 281 175 5 54 329 40 315 9.99e-56 185
MS.gene063125.t1 MTR_3g063180 35.370 311 187 8 56 355 42 349 2.58e-55 185
MS.gene063125.t1 MTR_1g062110 33.529 340 206 9 16 346 25 353 1.56e-54 184
MS.gene063125.t1 MTR_8g024120 34.237 295 188 6 56 349 42 331 3.10e-54 182
MS.gene063125.t1 MTR_7g062560 34.641 306 185 5 55 358 61 353 4.42e-54 182
MS.gene063125.t1 MTR_6g015950 34.286 315 188 8 44 351 27 329 1.19e-52 177
MS.gene063125.t1 MTR_2g102570 34.868 304 177 9 56 349 52 344 2.84e-52 177
MS.gene063125.t1 MTR_0056s0160 37.607 234 143 2 127 358 1 233 6.37e-52 172
MS.gene063125.t1 MTR_5g022020 32.099 324 209 7 22 342 9 324 1.46e-51 175
MS.gene063125.t1 MTR_0009s0480 34.307 274 169 4 12 283 6 270 1.67e-51 172
MS.gene063125.t1 MTR_3g058610 30.032 313 209 6 26 335 13 318 4.74e-51 174
MS.gene063125.t1 MTR_2g025120 32.566 304 190 8 55 352 3 297 6.06e-51 172
MS.gene063125.t1 MTR_8g075890 33.103 290 187 6 56 342 39 324 6.54e-51 174
MS.gene063125.t1 MTR_5g032870 34.967 306 186 8 56 353 38 338 1.22e-50 172
MS.gene063125.t1 MTR_4g087140 36.213 301 169 9 56 336 26 323 1.33e-50 172
MS.gene063125.t1 MTR_7g102820 32.581 310 186 7 50 346 61 360 4.13e-50 172
MS.gene063125.t1 MTR_5g065010 34.694 294 177 8 56 341 39 325 3.05e-49 169
MS.gene063125.t1 MTR_5g032880 35.526 304 187 7 56 353 376 676 4.31e-49 175
MS.gene063125.t1 MTR_5g032880 33.333 300 186 5 56 351 38 327 5.29e-46 167
MS.gene063125.t1 MTR_8g075830 32.069 290 190 6 56 342 39 324 7.36e-48 166
MS.gene063125.t1 MTR_3g088565 31.884 276 176 3 54 325 1 268 1.96e-47 163
MS.gene063125.t1 MTR_3g091350 32.667 300 188 9 56 350 59 349 5.34e-47 163
MS.gene063125.t1 MTR_4g087110 35.786 299 168 9 56 334 26 320 5.45e-47 163
MS.gene063125.t1 MTR_1g034060 33.333 303 174 8 55 334 25 322 7.42e-47 163
MS.gene063125.t1 MTR_1g034120 33.663 303 173 8 55 334 25 322 1.07e-46 162
MS.gene063125.t1 MTR_4g087120 35.216 301 171 9 56 336 26 322 7.76e-46 160
MS.gene063125.t1 MTR_3g083370 30.464 302 197 7 55 352 3 295 8.87e-46 159
MS.gene063125.t1 MTR_1g034140 35.034 294 168 8 56 334 27 312 7.58e-45 157
MS.gene063125.t1 MTR_7g081710 29.643 280 191 5 56 333 49 324 1.81e-44 156
MS.gene063125.t1 MTR_1g093110 29.114 316 210 8 51 358 65 374 1.76e-43 154
MS.gene063125.t1 MTR_1g070135 30.218 321 212 9 30 348 16 326 1.87e-43 154
MS.gene063125.t1 MTR_1g070085 32.492 317 194 10 45 348 17 326 2.00e-43 154
MS.gene063125.t1 MTR_1g070085 32.492 317 194 10 45 348 17 326 2.00e-43 154
MS.gene063125.t1 MTR_4g093840 30.868 311 201 7 56 358 62 366 4.34e-43 153
MS.gene063125.t1 MTR_3g091360 31.379 290 186 8 56 340 52 333 7.25e-43 152
MS.gene063125.t1 MTR_1g062110 34.182 275 167 8 16 281 25 294 9.31e-43 151
MS.gene063125.t1 MTR_6g464620 29.814 322 197 7 53 355 61 372 1.27e-42 152
MS.gene063125.t1 MTR_8g033380 30.351 313 204 7 54 355 52 361 1.77e-42 152
MS.gene063125.t1 MTR_8g041620 32.082 293 183 7 50 333 62 347 3.49e-42 151
MS.gene063125.t1 MTR_5g085330 30.182 275 180 6 54 325 3 268 4.39e-42 149
MS.gene063125.t1 MTR_7g451860 31.068 309 188 8 48 351 33 321 4.66e-42 150
MS.gene063125.t1 MTR_7g047670 31.068 309 188 8 48 351 33 321 4.66e-42 150
MS.gene063125.t1 MTR_8g062600 32.302 291 183 6 51 333 62 346 5.94e-42 150
MS.gene063125.t1 MTR_1g102070 30.159 315 205 7 53 355 56 367 9.51e-42 150
MS.gene063125.t1 MTR_1g048940 29.907 321 194 11 55 358 44 350 2.27e-41 148
MS.gene063125.t1 MTR_1g070120 29.492 295 200 7 56 348 38 326 2.35e-41 148
MS.gene063125.t1 MTR_7g102720 31.548 336 211 11 32 358 10 335 3.80e-41 147
MS.gene063125.t1 MTR_2g069300 30.537 298 193 7 56 347 54 343 1.21e-40 146
MS.gene063125.t1 MTR_3g088745 31.190 311 192 8 30 328 17 317 1.34e-40 146
MS.gene063125.t1 MTR_2g069060 31.132 318 201 8 39 349 32 338 1.62e-40 146
MS.gene063125.t1 MTR_8g009110 31.667 300 190 9 56 348 60 351 2.73e-40 145
MS.gene063125.t1 MTR_4g087100 34.448 299 172 9 56 334 26 320 4.52e-40 145
MS.gene063125.t1 MTR_8g009090 30.903 288 179 7 56 333 60 337 6.27e-40 145
MS.gene063125.t1 MTR_2g068950 32.168 286 182 6 50 331 57 334 9.80e-40 144
MS.gene063125.t1 MTR_8g041600 30.000 320 206 8 50 358 62 374 1.36e-39 144
MS.gene063125.t1 MTR_4g024660 32.950 261 167 5 50 308 61 315 1.75e-39 144
MS.gene063125.t1 MTR_2g069010 31.475 305 192 7 50 343 63 361 1.79e-39 144
MS.gene063125.t1 MTR_2g025120 33.478 230 141 6 55 281 3 223 1.80e-39 140
MS.gene063125.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 2.52e-39 143
MS.gene063125.t1 MTR_7g016090 31.716 268 177 5 84 349 63 326 3.34e-39 142
MS.gene063125.t1 MTR_2g068840 30.476 315 199 9 56 358 55 361 3.53e-39 143
MS.gene063125.t1 MTR_7g016090 31.716 268 177 5 84 349 65 328 3.53e-39 142
MS.gene063125.t1 MTR_8g009160 29.524 315 200 8 56 358 60 364 3.60e-39 143
MS.gene063125.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 3.62e-39 143
MS.gene063125.t1 MTR_2g069210 31.392 309 192 9 56 355 64 361 4.47e-39 142
MS.gene063125.t1 MTR_2g083000 30.877 285 171 9 56 333 33 298 5.08e-39 141
MS.gene063125.t1 MTR_8g009080 31.410 312 201 7 54 358 92 397 5.33e-39 143
MS.gene063125.t1 MTR_4g087090 30.976 297 182 8 56 335 30 320 6.25e-39 142
MS.gene063125.t1 MTR_0009s0050 39.645 169 99 2 192 358 1 168 7.06e-39 137
MS.gene063125.t1 MTR_1g070080 31.894 301 193 7 53 346 29 324 9.54e-39 141
MS.gene063125.t1 MTR_2g068960 31.615 291 180 7 54 333 61 343 1.83e-38 141
MS.gene063125.t1 MTR_2g069090 33.205 259 158 5 56 308 68 317 2.71e-38 140
MS.gene063125.t1 MTR_1g093120 29.180 305 195 8 50 343 61 355 2.74e-38 140
MS.gene063125.t1 MTR_5g005570 30.719 306 182 9 52 351 33 314 3.52e-38 139
MS.gene063125.t1 MTR_8g028435 30.233 301 187 10 56 344 60 349 8.28e-38 139
MS.gene063125.t1 MTR_2g069190 31.359 287 178 7 56 333 68 344 8.48e-38 139
MS.gene063125.t1 MTR_3g043900 31.270 307 198 6 56 358 56 353 1.12e-37 138
MS.gene063125.t1 MTR_7g056347 28.972 321 204 8 52 358 63 373 1.23e-37 139
MS.gene063125.t1 MTR_7g016080 32.567 261 151 6 80 332 61 304 1.37e-37 137
MS.gene063125.t1 MTR_4g087130 33.779 299 177 9 56 336 26 321 3.32e-37 137
MS.gene063125.t1 MTR_6g092620 29.348 276 181 5 54 324 1 267 6.13e-37 135
MS.gene063125.t1 MTR_3g045230 30.844 308 199 8 56 358 56 354 9.03e-37 136
MS.gene063125.t1 MTR_8g009170 29.900 301 190 8 56 344 60 351 1.22e-36 136
MS.gene063125.t1 MTR_4g117880 30.293 307 191 9 56 351 60 354 1.24e-36 136
MS.gene063125.t1 MTR_1g093140 28.664 307 205 8 50 349 67 366 1.75e-36 136
MS.gene063125.t1 MTR_0009s0400 42.361 144 81 1 217 358 1 144 3.01e-36 129
MS.gene063125.t1 MTR_1g043775 29.747 316 197 10 56 358 54 357 3.02e-36 135
MS.gene063125.t1 MTR_1g070085 32.540 252 164 6 99 348 1 248 3.17e-36 132
MS.gene063125.t1 MTR_8g063070 27.597 308 208 8 50 349 61 361 3.94e-36 135
MS.gene063125.t1 MTR_1g043810 30.363 303 189 9 56 348 54 344 5.86e-36 134
MS.gene063125.t1 MTR_1g081840 29.667 300 190 7 44 328 41 334 7.05e-36 134
MS.gene063125.t1 MTR_8g461330 31.164 292 175 10 56 333 27 306 7.60e-36 133
MS.gene063125.t1 MTR_8g008930 29.412 289 183 7 56 333 60 338 9.22e-36 134
MS.gene063125.t1 MTR_1g070185 29.431 299 195 8 50 342 63 351 9.87e-36 134
MS.gene063125.t1 MTR_1g011580 32.841 271 163 7 56 324 63 316 1.05e-35 133
MS.gene063125.t1 MTR_8g093930 27.726 321 211 8 22 332 19 328 1.17e-35 133
MS.gene063125.t1 MTR_3g096500 29.245 318 208 8 45 351 55 366 1.19e-35 134
MS.gene063125.t1 MTR_7g029655 30.492 305 191 11 49 342 60 354 3.54e-35 132
MS.gene063125.t1 MTR_1g070100 32.520 246 160 6 105 348 3 244 4.56e-35 129
MS.gene063125.t1 MTR_2g083030 30.312 320 187 11 29 333 5 303 4.95e-35 131
MS.gene063125.t1 MTR_8g469400 30.952 294 176 8 50 335 61 335 5.82e-34 129
MS.gene063125.t1 MTR_0032s0040 28.571 294 193 9 50 335 64 348 8.03e-34 129
MS.gene063125.t1 MTR_1g043760 30.116 259 164 7 56 308 54 301 1.02e-33 128
MS.gene063125.t1 MTR_7g105070 30.345 290 189 7 50 333 53 335 1.06e-33 128
MS.gene063125.t1 MTR_3g083370 29.661 236 154 6 55 287 3 229 1.21e-33 124
MS.gene063125.t1 MTR_1g032250 32.333 300 190 8 56 350 73 364 3.88e-33 127
MS.gene063125.t1 MTR_8g093980 29.154 319 207 9 50 358 53 362 7.88e-33 126
MS.gene063125.t1 MTR_1g032140 30.795 302 192 9 56 350 66 357 8.88e-33 125
MS.gene063125.t1 MTR_8g041600 30.645 248 160 6 50 292 62 302 1.01e-32 124
MS.gene063125.t1 MTR_7g056353 29.856 278 173 6 92 357 79 346 1.05e-32 127
MS.gene063125.t1 MTR_3g040410 32.226 301 179 12 56 348 6 289 1.32e-32 124
MS.gene063125.t1 MTR_4g074130 29.389 262 175 8 53 311 37 291 1.55e-32 124
MS.gene063125.t1 MTR_7g056393 30.449 312 194 8 50 349 61 361 3.23e-32 124
MS.gene063125.t1 MTR_7g078010 28.115 313 202 8 50 350 61 362 1.18e-31 122
MS.gene063125.t1 MTR_1g032220 30.667 300 195 8 56 350 73 364 1.24e-31 122
MS.gene063125.t1 MTR_2g069060 31.092 238 148 6 50 281 21 248 1.71e-31 119
MS.gene063125.t1 MTR_2g070870 28.912 294 189 9 44 330 16 296 2.11e-31 121
MS.gene063125.t1 MTR_4g119410 29.355 310 196 9 52 349 63 361 1.25e-30 120
MS.gene063125.t1 MTR_8g006930 28.438 320 211 9 50 358 61 373 1.98e-30 119
MS.gene063125.t1 MTR_2g019370 28.523 298 189 10 49 333 20 306 2.02e-30 119
MS.gene063125.t1 MTR_1g070135 29.921 254 167 8 30 281 16 260 2.64e-30 117
MS.gene063125.t1 MTR_4g011690 30.392 306 193 12 56 351 9 304 3.94e-30 117
MS.gene063125.t1 MTR_1g043770 28.897 263 170 6 52 308 49 300 5.40e-30 118
MS.gene063125.t1 MTR_8g009080 31.441 229 149 5 54 280 92 314 2.99e-29 115
MS.gene063125.t1 MTR_1g043775 31.034 232 142 7 56 280 54 274 4.53e-29 114
MS.gene063125.t1 MTR_8g009080 31.858 226 146 5 54 277 92 311 6.61e-29 114
MS.gene063125.t1 MTR_4g132770 40.517 116 69 0 209 324 21 136 3.54e-28 108
MS.gene063125.t1 MTR_1g043810 31.034 232 142 7 56 280 54 274 8.53e-28 111
MS.gene063125.t1 MTR_8g009120 27.331 311 201 8 56 358 60 353 3.90e-27 110
MS.gene063125.t1 MTR_2g072930 37.748 151 90 1 17 167 16 162 4.41e-27 105
MS.gene063125.t1 MTR_3g108520 30.293 307 192 13 52 343 3 302 5.09e-27 109
MS.gene063125.t1 MTR_4g123020 28.669 293 178 9 56 334 20 295 6.12e-27 108
MS.gene063125.t1 MTR_6g088665 30.519 308 182 12 57 335 11 315 1.18e-26 108
MS.gene063125.t1 MTR_8g009170 29.310 232 148 6 56 280 60 282 1.21e-26 107
MS.gene063125.t1 MTR_3g117430 52.294 109 15 2 250 358 58 129 1.49e-26 102
MS.gene063125.t1 MTR_3g117430 60.000 70 11 1 105 174 5 57 3.59e-19 82.8
MS.gene063125.t1 MTR_6g088665 30.421 309 182 12 57 335 11 316 2.49e-26 107
MS.gene063125.t1 MTR_4g021360 28.667 300 204 9 53 345 4 300 5.55e-26 106
MS.gene063125.t1 MTR_1g027290 28.939 311 184 12 52 344 25 316 6.25e-26 106
MS.gene063125.t1 MTR_8g009150 25.641 312 197 8 56 358 60 345 1.54e-25 105
MS.gene063125.t1 MTR_8g030880 29.514 288 183 10 56 334 10 286 1.87e-25 105
MS.gene063125.t1 MTR_3g464530 28.571 266 163 6 56 311 34 282 6.06e-25 103
MS.gene063125.t1 MTR_4g011720 29.260 311 205 12 48 351 1 303 1.06e-24 102
MS.gene063125.t1 MTR_7g078010 29.960 247 155 7 50 288 61 297 1.79e-24 102
MS.gene063125.t1 MTR_4g100600 28.308 325 209 13 48 356 1 317 2.24e-24 102
MS.gene063125.t1 MTR_1g043770 27.778 234 154 5 52 280 49 272 7.77e-24 100
MS.gene063125.t1 MTR_2g068800 28.175 252 148 8 56 299 55 281 1.63e-23 99.0
MS.gene063125.t1 MTR_7g090520 27.273 308 196 11 56 350 10 302 3.89e-23 98.6
MS.gene063125.t1 MTR_4g021380 27.885 312 210 9 51 351 2 309 3.95e-23 98.6
MS.gene063125.t1 MTR_1g027310 27.431 288 158 8 52 332 45 288 2.83e-22 96.3
MS.gene063125.t1 MTR_7g077670 27.974 311 201 12 50 351 5 301 4.13e-22 95.9
MS.gene063125.t1 MTR_1g070110 29.237 236 131 6 99 331 4 206 7.46e-22 93.2
MS.gene063125.t1 MTR_2g033270 29.630 270 160 10 80 334 38 292 2.56e-21 93.6
MS.gene063125.t1 MTR_4g100590 27.483 302 196 11 48 337 1 291 3.38e-21 93.2
MS.gene063125.t1 MTR_4g096840 25.769 260 178 10 79 328 45 299 4.45e-21 92.8
MS.gene063125.t1 MTR_8g009180 30.220 182 120 4 166 342 99 278 7.19e-21 91.7
MS.gene063125.t1 MTR_1g086550 25.503 298 193 9 56 334 20 307 2.78e-20 90.9
MS.gene063125.t1 MTR_8g102600 28.425 292 185 11 77 348 29 316 2.98e-20 90.5
MS.gene063125.t1 MTR_5g027230 27.758 281 187 5 56 334 6 272 1.47e-19 88.2
MS.gene063125.t1 MTR_3g464530 28.390 236 142 6 56 281 34 252 3.98e-19 85.9
MS.gene063125.t1 MTR_4g094900 29.661 236 140 8 56 267 8 241 6.15e-19 85.5
MS.gene063125.t1 MTR_0009s0410 31.288 163 102 3 11 171 5 159 7.94e-19 83.2
MS.gene063125.t1 MTR_5g025090 26.855 283 187 6 56 334 5 271 1.78e-18 85.1
MS.gene063125.t1 MTR_5g025060 25.704 284 172 6 52 334 2 247 2.13e-16 79.0
MS.gene063125.t1 MTR_1g043840 31.847 157 97 5 153 308 37 184 2.16e-16 79.7
MS.gene063125.t1 MTR_4g100590 29.482 251 158 10 99 337 1 244 2.46e-16 78.6
MS.gene063125.t1 MTR_5g024940 26.855 283 168 7 56 334 6 253 2.67e-15 75.9
MS.gene063125.t1 MTR_1g011600 28.249 177 122 4 162 335 121 295 1.13e-14 73.9
MS.gene063125.t1 MTR_6g035160 33.088 136 86 4 217 348 35 169 1.70e-14 71.2
MS.gene063125.t1 MTR_1g032240 34.211 114 64 3 204 316 48 151 6.11e-11 61.2
MS.gene063125.t1 MTR_4g011720 28.631 241 157 12 48 281 1 233 6.20e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063125.t1 AT5G20400 54.942 344 152 3 16 358 7 348 1.64e-135 390
MS.gene063125.t1 AT1G49390 53.488 344 157 3 16 358 7 348 1.89e-134 387
MS.gene063125.t1 AT5G20550 57.655 307 128 2 54 358 43 349 3.46e-131 379
MS.gene063125.t1 AT5G54000 51.297 347 161 5 16 358 7 349 3.45e-126 366
MS.gene063125.t1 AT1G49390 57.993 269 113 0 90 358 1 269 7.54e-119 345
MS.gene063125.t1 AT5G54000 54.647 269 122 0 90 358 1 269 2.88e-111 325
MS.gene063125.t1 AT3G21420 43.966 348 186 6 18 358 17 362 5.66e-87 267
MS.gene063125.t1 AT1G17020 36.288 361 221 5 3 358 2 358 1.43e-77 243
MS.gene063125.t1 AT4G25300 39.677 310 177 3 55 358 51 356 7.13e-76 238
MS.gene063125.t1 AT1G78550 40.000 305 180 2 56 358 53 356 6.10e-75 236
MS.gene063125.t1 AT2G38240 36.232 345 207 5 17 355 11 348 2.45e-74 234
MS.gene063125.t1 AT1G17010 36.311 347 212 4 17 358 16 358 4.32e-73 231
MS.gene063125.t1 AT4G25310 40.323 310 172 4 55 358 51 353 7.46e-72 228
MS.gene063125.t1 AT5G05600 36.688 308 186 4 55 355 61 366 1.90e-68 219
MS.gene063125.t1 AT1G78550 39.286 280 165 3 81 358 2 278 2.57e-65 208
MS.gene063125.t1 AT3G11180 37.370 289 176 3 49 335 88 373 3.67e-64 209
MS.gene063125.t1 AT3G11180 37.370 289 176 3 49 335 88 373 3.80e-64 209
MS.gene063125.t1 AT3G55970 35.762 302 186 5 56 351 52 351 3.95e-62 203
MS.gene063125.t1 AT5G08640 36.042 283 171 5 56 334 43 319 8.01e-60 196
MS.gene063125.t1 AT5G08640 36.042 283 171 5 56 334 43 319 8.01e-60 196
MS.gene063125.t1 AT4G22880 33.798 287 182 5 55 334 46 331 7.43e-59 194
MS.gene063125.t1 AT4G22880 33.798 287 182 5 55 334 46 331 7.43e-59 194
MS.gene063125.t1 AT4G22880 33.798 287 182 5 55 334 46 331 7.43e-59 194
MS.gene063125.t1 AT4G16330 36.156 307 177 8 56 355 67 361 2.69e-57 190
MS.gene063125.t1 AT2G36690 33.828 337 209 8 16 348 19 345 1.49e-55 186
MS.gene063125.t1 AT2G36690 33.828 337 209 8 16 348 19 345 1.49e-55 186
MS.gene063125.t1 AT4G10500 35.495 293 179 8 56 343 44 331 1.57e-55 185
MS.gene063125.t1 AT3G19010 37.049 305 172 9 47 336 20 319 3.33e-54 182
MS.gene063125.t1 AT3G19010 37.049 305 172 9 47 336 20 319 3.33e-54 182
MS.gene063125.t1 AT5G24530 33.634 333 187 9 37 348 4 323 1.31e-53 180
MS.gene063125.t1 AT4G25310 36.275 306 162 5 55 358 51 325 2.57e-52 176
MS.gene063125.t1 AT5G05600 36.522 230 143 2 55 281 61 290 2.66e-52 175
MS.gene063125.t1 AT3G60290 35.135 296 178 7 44 332 38 326 4.56e-52 176
MS.gene063125.t1 AT2G44800 35.125 279 169 6 52 325 48 319 7.11e-51 173
MS.gene063125.t1 AT1G55290 34.395 314 189 9 52 358 58 361 1.08e-49 171
MS.gene063125.t1 AT4G16330 36.782 261 152 7 102 355 1 255 5.83e-49 166
MS.gene063125.t1 AT1G62380 31.148 305 198 6 51 352 2 297 8.00e-49 167
MS.gene063125.t1 AT3G13610 33.754 317 191 10 50 358 56 361 1.57e-48 167
MS.gene063125.t1 AT4G10490 33.333 297 184 9 56 348 42 328 1.71e-48 167
MS.gene063125.t1 AT5G63590 32.997 297 179 7 52 336 10 298 2.12e-48 166
MS.gene063125.t1 AT1G12010 31.511 311 200 7 51 357 2 303 2.68e-48 166
MS.gene063125.t1 AT5G07200 34.035 285 176 5 54 328 56 338 5.00e-48 167
MS.gene063125.t1 AT1G15550 33.333 312 192 7 30 335 31 332 2.30e-47 164
MS.gene063125.t1 AT5G63600 30.479 292 191 6 52 340 29 311 4.16e-47 162
MS.gene063125.t1 AT3G55970 34.632 231 146 3 56 281 52 282 1.06e-46 161
MS.gene063125.t1 AT5G63600 30.375 293 191 7 52 340 29 312 3.97e-46 160
MS.gene063125.t1 AT1G60980 32.979 282 175 5 54 323 55 334 7.42e-46 160
MS.gene063125.t1 AT1G05010 33.333 273 169 6 56 324 4 267 9.15e-46 159
MS.gene063125.t1 AT3G51240 31.959 291 189 8 56 342 38 323 9.17e-46 160
MS.gene063125.t1 AT3G19010 34.098 305 151 9 47 336 20 289 1.06e-45 159
MS.gene063125.t1 AT1G77330 33.574 277 162 7 54 320 1 265 3.23e-45 157
MS.gene063125.t1 AT5G07480 30.031 323 194 9 56 358 44 354 1.36e-44 157
MS.gene063125.t1 AT1G44090 31.629 313 203 6 47 351 54 363 4.01e-44 156
MS.gene063125.t1 AT3G19000 34.375 320 180 10 30 333 16 321 1.37e-43 154
MS.gene063125.t1 AT4G25420 31.206 282 184 4 53 326 58 337 3.67e-43 154
MS.gene063125.t1 AT4G21200 31.475 305 184 7 29 318 3 297 5.97e-43 152
MS.gene063125.t1 AT5G63595 31.679 262 151 5 52 311 21 256 1.21e-42 150
MS.gene063125.t1 AT5G51810 30.662 287 187 4 53 332 60 341 6.70e-42 150
MS.gene063125.t1 AT5G43935 31.560 282 156 8 56 329 19 271 2.46e-41 147
MS.gene063125.t1 AT1G80340 31.515 330 198 10 30 348 28 340 5.66e-41 147
MS.gene063125.t1 AT1G80330 29.355 310 197 10 56 353 49 348 1.36e-40 146
MS.gene063125.t1 AT3G19010 37.052 251 138 9 47 282 20 265 1.51e-40 145
MS.gene063125.t1 AT1G06620 33.459 266 161 6 49 308 55 310 1.51e-40 146
MS.gene063125.t1 AT5G43450 32.576 264 162 6 50 308 55 307 3.59e-40 145
MS.gene063125.t1 AT5G43440 29.338 317 203 8 53 358 59 365 1.07e-39 144
MS.gene063125.t1 AT4G25300 38.462 195 110 3 170 358 72 262 1.25e-39 141
MS.gene063125.t1 AT5G63580 33.475 236 147 5 49 281 12 240 1.51e-39 140
MS.gene063125.t1 AT5G63580 33.761 234 145 5 49 279 12 238 2.57e-39 140
MS.gene063125.t1 AT5G59530 30.094 319 207 8 50 358 52 364 6.54e-39 142
MS.gene063125.t1 AT1G78440 31.034 290 174 9 56 332 18 294 6.92e-39 141
MS.gene063125.t1 AT3G51240 32.083 240 157 5 105 342 4 239 4.32e-38 137
MS.gene063125.t1 AT2G30830 32.069 290 183 8 51 333 49 331 4.39e-38 140
MS.gene063125.t1 AT1G06645 30.945 307 190 10 49 342 66 363 9.85e-38 139
MS.gene063125.t1 AT1G04380 31.679 262 162 6 52 308 41 290 2.29e-37 137
MS.gene063125.t1 AT5G59540 28.852 305 200 8 50 344 55 352 4.40e-37 137
MS.gene063125.t1 AT3G61400 31.560 282 180 7 69 342 79 355 4.80e-37 137
MS.gene063125.t1 AT3G12900 28.431 306 203 10 59 357 59 355 7.75e-37 136
MS.gene063125.t1 AT1G06640 29.904 311 191 10 49 342 53 353 4.38e-36 135
MS.gene063125.t1 AT5G12270 29.022 317 198 8 56 358 56 359 1.90e-35 133
MS.gene063125.t1 AT1G03410 31.525 295 183 9 49 333 50 335 4.51e-35 132
MS.gene063125.t1 AT1G03410 31.525 295 183 9 49 333 87 372 9.29e-35 132
MS.gene063125.t1 AT3G19000 34.328 268 146 10 30 281 16 269 1.25e-34 129
MS.gene063125.t1 AT1G04350 28.972 321 204 10 50 358 52 360 1.45e-34 130
MS.gene063125.t1 AT2G30840 30.855 269 175 7 47 310 48 310 1.63e-34 130
MS.gene063125.t1 AT2G19590 29.470 302 190 10 47 342 2 286 2.46e-34 129
MS.gene063125.t1 AT5G07480 32.287 223 137 6 147 358 26 245 3.00e-34 127
MS.gene063125.t1 AT1G06650 30.000 300 187 10 56 342 64 353 4.62e-34 129
MS.gene063125.t1 AT1G06620 32.773 238 144 6 49 280 55 282 6.45e-34 127
MS.gene063125.t1 AT5G43450 31.780 236 145 6 50 280 55 279 3.71e-33 125
MS.gene063125.t1 AT5G43440 30.085 236 151 5 53 283 59 285 3.87e-32 122
MS.gene063125.t1 AT2G25450 28.767 292 195 7 49 333 48 333 4.80e-32 124
MS.gene063125.t1 AT4G25420 30.380 237 155 4 53 281 58 292 6.52e-32 122
MS.gene063125.t1 AT3G49620 29.795 292 172 6 56 321 34 318 9.38e-32 122
MS.gene063125.t1 AT3G50210 28.966 290 182 8 56 321 8 297 5.70e-31 120
MS.gene063125.t1 AT3G50210 28.966 290 182 8 56 321 8 297 5.70e-31 120
MS.gene063125.t1 AT3G50210 28.966 290 182 8 56 321 8 297 5.70e-31 120
MS.gene063125.t1 AT4G21690 28.041 296 192 5 49 333 40 325 6.20e-31 120
MS.gene063125.t1 AT1G04380 30.802 237 147 6 52 283 41 265 6.35e-31 118
MS.gene063125.t1 AT2G30840 30.112 269 171 8 47 310 48 304 9.91e-31 120
MS.gene063125.t1 AT1G06640 31.004 229 141 6 56 277 64 282 8.57e-30 116
MS.gene063125.t1 AT5G51810 29.289 239 157 4 53 284 60 293 1.49e-29 115
MS.gene063125.t1 AT1G06640 30.603 232 144 6 56 280 64 285 1.50e-29 116
MS.gene063125.t1 AT1G03400 29.655 290 186 7 49 333 49 325 1.86e-29 116
MS.gene063125.t1 AT3G49630 28.671 286 183 5 56 321 9 293 3.81e-29 115
MS.gene063125.t1 AT3G61400 32.093 215 139 4 69 281 79 288 4.21e-29 114
MS.gene063125.t1 AT1G52820 29.412 323 211 10 41 357 1 312 7.19e-29 114
MS.gene063125.t1 AT2G19590 30.153 262 161 9 87 342 26 271 8.26e-29 113
MS.gene063125.t1 AT5G59540 28.692 237 157 6 50 281 55 284 1.20e-28 112
MS.gene063125.t1 AT1G50960 27.407 270 184 6 52 317 36 297 1.55e-28 114
MS.gene063125.t1 AT3G49630 28.938 273 182 4 60 321 18 289 2.06e-28 113
MS.gene063125.t1 AT1G06650 30.252 238 149 7 56 286 64 291 7.43e-28 111
MS.gene063125.t1 AT1G30040 26.871 294 196 8 48 333 23 305 1.69e-27 110
MS.gene063125.t1 AT2G30840 28.992 238 159 6 47 280 48 279 4.20e-27 109
MS.gene063125.t1 AT3G46500 28.966 290 175 12 58 319 11 297 5.34e-26 106
MS.gene063125.t1 AT3G46500 29.412 272 171 11 58 311 11 279 7.57e-25 102
MS.gene063125.t1 AT1G03400 27.044 318 186 8 49 333 49 353 3.62e-24 102
MS.gene063125.t1 AT2G34555 28.070 285 185 10 56 332 27 299 4.30e-24 101
MS.gene063125.t1 AT1G14130 27.397 292 182 6 56 337 9 280 2.19e-23 99.0
MS.gene063125.t1 AT1G47990 29.097 299 176 11 53 333 12 292 3.05e-22 96.3
MS.gene063125.t1 AT1G14120 26.408 284 195 5 56 337 8 279 5.02e-21 92.4
MS.gene063125.t1 AT1G14120 26.408 284 195 5 56 337 8 279 5.02e-21 92.4
MS.gene063125.t1 AT1G14120 26.408 284 195 5 56 337 8 279 5.02e-21 92.4
MS.gene063125.t1 AT5G51310 29.642 307 175 15 54 336 3 292 5.71e-21 92.8
MS.gene063125.t1 AT1G52800 25.000 312 198 10 56 350 10 302 1.03e-20 91.7
MS.gene063125.t1 AT3G47190 24.848 330 202 11 24 336 3 303 1.66e-20 91.3
MS.gene063125.t1 AT4G03070 28.049 328 204 17 47 358 5 316 2.63e-20 90.9
MS.gene063125.t1 AT1G28030 26.433 314 214 10 50 353 7 313 7.05e-20 89.4
MS.gene063125.t1 AT5G58660 26.460 291 180 8 53 318 31 312 9.86e-20 89.4
MS.gene063125.t1 AT3G50210 29.878 164 110 2 163 321 52 215 1.84e-19 87.0
MS.gene063125.t1 AT3G46490 26.370 292 187 11 48 314 1 289 5.97e-19 87.0
MS.gene063125.t1 AT1G02400 25.342 292 201 9 50 332 18 301 7.66e-19 86.7
MS.gene063125.t1 AT4G16765 32.804 189 115 6 157 335 44 230 1.38e-18 84.3
MS.gene063125.t1 AT4G16765 32.804 189 115 6 157 335 44 230 1.38e-18 84.3
MS.gene063125.t1 AT4G16765 32.804 189 115 6 157 335 44 230 1.38e-18 84.3
MS.gene063125.t1 AT3G46490 26.573 286 182 11 48 308 1 283 1.68e-18 85.5
MS.gene063125.t1 AT3G49630 30.000 160 110 2 163 321 62 220 2.46e-18 84.0
MS.gene063125.t1 AT4G16765 33.333 186 112 6 157 332 44 227 4.11e-18 82.8
MS.gene063125.t1 AT1G30040 25.207 242 162 8 48 281 23 253 1.89e-17 81.6
MS.gene063125.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.20e-17 80.9
MS.gene063125.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.20e-17 80.9
MS.gene063125.t1 AT1G35190 28.929 280 177 9 77 336 29 306 4.02e-17 81.6
MS.gene063125.t1 AT3G46500 29.630 189 118 8 136 311 19 205 2.19e-16 77.8
MS.gene063125.t1 AT1G35190 27.957 279 158 10 77 336 29 283 2.22e-16 79.3
MS.gene063125.t1 AT4G23340 27.358 318 193 14 51 350 5 302 2.72e-16 79.3
MS.gene063125.t1 AT3G46500 31.902 163 92 6 174 319 1 161 7.32e-16 75.5
MS.gene063125.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.74e-15 74.7
MS.gene063125.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.74e-15 74.7
MS.gene063125.t1 AT4G22870 34.884 86 55 1 250 334 2 87 8.70e-14 67.4
MS.gene063125.t1 AT3G46480 30.172 232 127 11 106 316 37 254 1.29e-13 70.9
MS.gene063125.t1 AT4G16765 36.364 110 63 3 231 335 77 184 1.35e-13 69.3
MS.gene063125.t1 AT4G16765 33.803 142 83 5 157 288 44 184 1.05e-12 66.6
MS.gene063125.t1 AT3G46500 28.916 166 104 7 136 288 19 183 4.98e-12 64.3
MS.gene063125.t1 AT4G03050 32.031 128 82 5 227 351 271 396 1.31e-11 65.9
MS.gene063125.t1 AT4G03050 32.031 128 82 5 227 351 271 396 1.31e-11 65.9
MS.gene063125.t1 AT4G23340 33.813 139 86 4 217 350 47 184 1.92e-11 63.2
MS.gene063125.t1 AT1G02400 23.438 256 180 8 50 297 18 265 3.70e-11 63.5
MS.gene063125.t1 AT3G46500 25.871 201 112 9 136 319 19 199 8.16e-11 62.0
MS.gene063125.t1 AT4G22870 33.333 78 51 1 258 334 51 128 8.72e-11 60.1

Find 76 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 3.4:+99805311 MS.gene063125:CDS
TTAATCTCTTGTTCTGAATC+TGG 0.210279 3.4:-99808650 None:intergenic
ACATAACTATGATTAAATTT+TGG 0.220701 3.4:-99808786 None:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 3.4:+99807757 MS.gene063125:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 3.4:-99805156 None:intergenic
AATATTACCAACAGGGAAAA+AGG 0.234600 3.4:+99808750 MS.gene063125:CDS
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 3.4:+99805298 MS.gene063125:CDS
AATTATATCTACAATGAATT+AGG 0.265397 3.4:+99805162 MS.gene063125:CDS
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 3.4:+99807283 MS.gene063125:CDS
TTGAAATTCCTCTGATCTTC+CGG 0.295977 3.4:-99807333 None:intergenic
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 3.4:+99805299 MS.gene063125:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 3.4:+99807903 MS.gene063125:CDS
TTCACTGGTCTGTATAATAT+TGG 0.322104 3.4:-99808704 None:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.323173 3.4:-99807842 None:intergenic
GAATTTATACCTGAAATCAT+TGG 0.353550 3.4:-99807373 None:intergenic
ATCAGAGGAATTTCAAACTT+TGG 0.357694 3.4:+99807340 MS.gene063125:CDS
ACGAGAGCATCAGGGATTAT+TGG 0.359276 3.4:-99808026 None:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 3.4:-99808035 None:intergenic
CCAAACGGTATTGAAGGATA+TGG 0.374061 3.4:+99807243 MS.gene063125:CDS
TAATCTCTTGTTCTGAATCT+GGG 0.407176 3.4:-99808649 None:intergenic
ATACTTTCAATATTACCAAC+AGG 0.409573 3.4:+99808742 MS.gene063125:CDS
GATGGCAGAATCGGTGGGTT+CGG 0.415598 3.4:+99805068 None:intergenic
AGTAGTGATAAATGAAGAAA+AGG 0.420128 3.4:+99808598 MS.gene063125:CDS
CCATATCCTTCAATACCGTT+TGG 0.420764 3.4:-99807243 None:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 3.4:+99805087 MS.gene063125:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 3.4:-99807372 None:intergenic
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 3.4:-99805267 None:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 3.4:+99805300 MS.gene063125:CDS
TACAATGAATTAGGTGGTGT+TGG 0.450827 3.4:+99805171 MS.gene063125:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 3.4:-99805237 None:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 3.4:+99807966 MS.gene063125:CDS
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 3.4:+99807827 MS.gene063125:CDS
TTTATCACTACTCTGTGTAC+TGG 0.484624 3.4:-99808587 None:intergenic
TTCTCCATCTACAGCACAGC+AGG 0.485461 3.4:+99805263 MS.gene063125:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 3.4:+99807806 MS.gene063125:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 3.4:+99807314 MS.gene063125:CDS
AGGGAGCCAAACGGTATTGA+AGG 0.498045 3.4:+99807237 MS.gene063125:CDS
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 3.4:+99805074 MS.gene063125:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 3.4:+99807305 MS.gene063125:CDS
TTTGCGCCTAGAACATGATC+AGG 0.517333 3.4:-99807909 None:intergenic
CTACTCTGTGTACTGGACTC+TGG 0.522493 3.4:-99808580 None:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 3.4:+99807770 MS.gene063125:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 3.4:-99805253 None:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 3.4:+99805116 MS.gene063125:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 3.4:+99807194 MS.gene063125:CDS
GGCGCAAAGCCACATGCTGA+TGG 0.542753 3.4:+99807924 MS.gene063125:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 3.4:+99807160 MS.gene063125:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 3.4:+99807812 MS.gene063125:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 3.4:+99805062 None:intergenic
TAATGTTGGTGATCAAATAG+AGG 0.552527 3.4:+99808052 MS.gene063125:CDS
TTGTAGATATAATTATTTGG+TGG 0.579722 3.4:-99805153 None:intergenic
CCGTCCACTAGTCTGTCGAC+TGG 0.584898 3.4:-99808674 None:intergenic
CAGTCGACAGACTAGTGGAC+GGG 0.592554 3.4:+99808675 MS.gene063125:CDS
ACATGATCAGGCATAGGACA+TGG 0.597433 3.4:-99807897 None:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 3.4:+99805165 MS.gene063125:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 3.4:+99805063 None:intergenic
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 3.4:+99807161 MS.gene063125:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 3.4:+99808038 MS.gene063125:CDS
CCTAGAACATGATCAGGCAT+AGG 0.615770 3.4:-99807903 None:intergenic
AAGTCCTAAAAGATAATCAG+TGG 0.615774 3.4:+99807994 MS.gene063125:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 3.4:+99807228 MS.gene063125:CDS
TGATAAATGAAGAAAAGGAA+AGG 0.617930 3.4:+99808603 MS.gene063125:CDS
TACTTTCAATATTACCAACA+GGG 0.625782 3.4:+99808743 MS.gene063125:CDS
GAGACAAGCTTGTCATACCA+TGG 0.626742 3.4:-99807146 None:intergenic
GATTGCTTCCTAAAGGAATG+TGG 0.631118 3.4:+99807834 MS.gene063125:CDS
AGGTACATCCGGAAGATCAG+AGG 0.633070 3.4:+99807325 MS.gene063125:CDS
GTTACACAGATAATGAGCAA+TGG 0.639099 3.4:+99808551 MS.gene063125:intron
TAAACCAGTCGACAGACTAG+TGG 0.643978 3.4:+99808670 MS.gene063125:CDS
CATTAATCACGAGAGCATCA+GGG 0.648254 3.4:-99808034 None:intergenic
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 3.4:-99805299 None:intergenic
CCAGTCGACAGACTAGTGGA+CGG 0.661367 3.4:+99808674 MS.gene063125:CDS
ATAGATGATCCATCAGCATG+TGG 0.675560 3.4:-99807933 None:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 3.4:-99805213 None:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 3.4:-99807893 None:intergenic
GTGATTCAGGCAATAAACCA+TGG 0.682925 3.4:+99807129 MS.gene063125:intron
TGATCAGGCATAGGACATGG+AGG 0.683082 3.4:-99807894 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATCATAAC+AGG - chr3.4:99805841-99805860 None:intergenic 10.0%
!! AAAAGAATATTCATTGTTAA+TGG - chr3.4:99807416-99807435 None:intergenic 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - chr3.4:99807415-99807434 None:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + chr3.4:99805162-99805181 MS.gene063125:CDS 15.0%
!! TCATTGTAGATATAATTATT+TGG - chr3.4:99805159-99805178 None:intergenic 15.0%
!! TTAAATCAATAAATCATAAC+AGG - chr3.4:99806926-99806945 None:intergenic 15.0%
!! TTGAATGTAAATATTAGATA+TGG + chr3.4:99807014-99807033 MS.gene063125:intron 15.0%
!! TTGATTTAAATTAGAGAATA+CGG + chr3.4:99806937-99806956 MS.gene063125:intron 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - chr3.4:99805675-99805694 None:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - chr3.4:99805676-99805695 None:intergenic 15.0%
!!! TTACAGTGTTTTTTTTTTTT+TGG - chr3.4:99806023-99806042 None:intergenic 15.0%
!! AAATAGAAAATATTAGCAGT+TGG - chr3.4:99805359-99805378 None:intergenic 20.0%
!! AACAAAATTAGTAGATTTGT+AGG - chr3.4:99807540-99807559 None:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + chr3.4:99807757-99807776 MS.gene063125:CDS 20.0%
!! AATTTATACCTGAAATCATT+GGG - chr3.4:99807375-99807394 None:intergenic 20.0%
!! ACAAAATTAGTAGATTTGTA+GGG - chr3.4:99807539-99807558 None:intergenic 20.0%
!! ATCTATGATATATAACTGAT+AGG + chr3.4:99808500-99808519 MS.gene063125:intron 20.0%
!! TAAACAACAAACAAATCAAA+AGG + chr3.4:99806464-99806483 MS.gene063125:intron 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - chr3.4:99807693-99807712 None:intergenic 20.0%
!! TATATCATAGATATAAGCTT+TGG - chr3.4:99808492-99808511 None:intergenic 20.0%
!! TTGTAGATATAATTATTTGG+TGG - chr3.4:99805156-99805175 None:intergenic 20.0%
!!! AACGTACAATTTTTTGTTAT+TGG + chr3.4:99807602-99807621 MS.gene063125:intron 20.0%
!!! AATTTTTTTCTGGTACATAT+TGG + chr3.4:99807071-99807090 MS.gene063125:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + chr3.4:99807061-99807080 MS.gene063125:intron 20.0%
!!! TTGTTATTTTCACTTTTTTG+TGG + chr3.4:99808261-99808280 MS.gene063125:intron 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - chr3.4:99806010-99806029 None:intergenic 20.0%
! AAAATAATTAGGAACCTCAT+TGG - chr3.4:99807107-99807126 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr3.4:99807217-99807236 MS.gene063125:CDS 25.0%
! AATATCTAAGAGTTTGAACT+CGG - chr3.4:99807647-99807666 None:intergenic 25.0%
! AATATTTACATTCAACTTCG+TGG - chr3.4:99807009-99807028 None:intergenic 25.0%
! AATCAATAAATCATAACAGG+CGG - chr3.4:99806923-99806942 None:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + chr3.4:99806289-99806308 MS.gene063125:intron 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr3.4:99807218-99807237 MS.gene063125:CDS 25.0%
! AGTAGTGATAAATGAAGAAA+AGG + chr3.4:99808598-99808617 MS.gene063125:CDS 25.0%
! ATACGGTATAATCTGTTATT+TGG + chr3.4:99806954-99806973 MS.gene063125:intron 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - chr3.4:99805414-99805433 None:intergenic 25.0%
! ATACTTTCAATATTACCAAC+AGG + chr3.4:99808742-99808761 MS.gene063125:CDS 25.0%
! ATATATTTCATGTTCAATGC+AGG + chr3.4:99807724-99807743 MS.gene063125:intron 25.0%
! ATCAGGATTGTAATTATGAT+CGG + chr3.4:99805432-99805451 MS.gene063125:intron 25.0%
! CTGAATCACACAAAATAATT+AGG - chr3.4:99807118-99807137 None:intergenic 25.0%
! GAAGATAAAAACAGAAAACA+CGG - chr3.4:99808140-99808159 None:intergenic 25.0%
! GAATTTATACCTGAAATCAT+TGG - chr3.4:99807376-99807395 None:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - chr3.4:99805819-99805838 None:intergenic 25.0%
! TACTTTCAATATTACCAACA+GGG + chr3.4:99808743-99808762 MS.gene063125:CDS 25.0%
! TATATCTACAATGAATTAGG+TGG + chr3.4:99805165-99805184 MS.gene063125:CDS 25.0%
! TCTAATACAACTATACTTAG+AGG - chr3.4:99805742-99805761 None:intergenic 25.0%
! TGATAAATGAAGAAAAGGAA+AGG + chr3.4:99808603-99808622 MS.gene063125:CDS 25.0%
! TTAACTTAGAAGATAGTATC+AGG + chr3.4:99805415-99805434 MS.gene063125:intron 25.0%
!! AAATCAACATAGTTTTTCAC+TGG - chr3.4:99808722-99808741 None:intergenic 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - chr3.4:99806347-99806366 None:intergenic 25.0%
!!! CTAATTATTTTGTGTGATTC+AGG + chr3.4:99807116-99807135 MS.gene063125:intron 25.0%
!!! TAAACCACTGATTATCTTTT+AGG - chr3.4:99808001-99808020 None:intergenic 25.0%
!!! TAAATTTTGGAAGCTTCAAT+TGG - chr3.4:99808776-99808795 None:intergenic 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr3.4:99807213-99807232 None:intergenic 25.0%
!!! TTTGACTCAAATTGGTTTTT+GGG - chr3.4:99806226-99806245 None:intergenic 25.0%
AAATAATTGTGTAACGGTCA+TGG - chr3.4:99807687-99807706 None:intergenic 30.0%
AACCTACATCAACTAAATGT+TGG + chr3.4:99808380-99808399 MS.gene063125:intron 30.0%
AAGTCCTAAAAGATAATCAG+TGG + chr3.4:99807994-99808013 MS.gene063125:CDS 30.0%
AATATGTAAGACGAAAGACA+TGG + chr3.4:99806430-99806449 MS.gene063125:intron 30.0%
AATATTACCAACAGGGAAAA+AGG + chr3.4:99808750-99808769 MS.gene063125:CDS 30.0%
AATTTGGTATTATAGTCTGG+TGG - chr3.4:99806285-99806304 None:intergenic 30.0%
ACCTACATCAACTAAATGTT+GGG + chr3.4:99808381-99808400 MS.gene063125:intron 30.0%
AGTATATCTTAAGGTACATC+CGG + chr3.4:99807314-99807333 MS.gene063125:CDS 30.0%
ATATGAAGATCTGATTGTGA+AGG - chr3.4:99805216-99805235 None:intergenic 30.0%
ATCAGAGGAATTTCAAACTT+TGG + chr3.4:99807340-99807359 MS.gene063125:CDS 30.0%
CAAAAAATTGTACGTTTGCA+AGG - chr3.4:99807598-99807617 None:intergenic 30.0%
CAAAGTGGACATTAGTTATA+AGG - chr3.4:99805804-99805823 None:intergenic 30.0%
CAACACAAACATAAATCTAG+AGG + chr3.4:99806819-99806838 MS.gene063125:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + chr3.4:99807283-99807302 MS.gene063125:CDS 30.0%
GACTATAATACCAAATTAGC+AGG + chr3.4:99806288-99806307 MS.gene063125:intron 30.0%
GACTGATAGAGTATATCTTA+AGG + chr3.4:99807305-99807324 MS.gene063125:CDS 30.0%
GCTAATTTGGTATTATAGTC+TGG - chr3.4:99806288-99806307 None:intergenic 30.0%
TATTTAATAACTCCACCGAA+AGG + chr3.4:99807461-99807480 MS.gene063125:intron 30.0%
TATTTGAGAGTAGCATTCTT+GGG - chr3.4:99807052-99807071 None:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - chr3.4:99807053-99807072 None:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + chr3.4:99807770-99807789 MS.gene063125:CDS 30.0%
! TAATCTCTTGTTCTGAATCT+GGG - chr3.4:99808652-99808671 None:intergenic 30.0%
! TGTAGGTTTTTCATATTTGC+AGG - chr3.4:99808368-99808387 None:intergenic 30.0%
! TTAATCTCTTGTTCTGAATC+TGG - chr3.4:99808653-99808672 None:intergenic 30.0%
! TTCACTGGTCTGTATAATAT+TGG - chr3.4:99808707-99808726 None:intergenic 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + chr3.4:99808052-99808071 MS.gene063125:CDS 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + chr3.4:99805484-99805503 MS.gene063125:intron 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - chr3.4:99806335-99806354 None:intergenic 30.0%
!!! CTTTGACTCAAATTGGTTTT+TGG - chr3.4:99806227-99806246 None:intergenic 30.0%
!!! GATTATCTTTTAGGACTTGA+AGG - chr3.4:99807992-99808011 None:intergenic 30.0%
!!! GTCTGTGAGTTTTATTTTGA+GGG - chr3.4:99806094-99806113 None:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - chr3.4:99806007-99806026 None:intergenic 30.0%
!!! TTTTTTCTGGTACATATTGG+TGG + chr3.4:99807074-99807093 MS.gene063125:intron 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + chr3.4:99807959-99807978 MS.gene063125:CDS 30.0%
AAAATCACTGAACTTGGAAG+AGG + chr3.4:99807812-99807831 MS.gene063125:CDS 35.0%
AGTTCAAATCCCCTTGAATA+CGG + chr3.4:99805545-99805564 MS.gene063125:intron 35.0%
CATAGCAAAATCACTGAACT+TGG + chr3.4:99807806-99807825 MS.gene063125:CDS 35.0%
CATTGTTAATGGGAACTTAG+TGG - chr3.4:99807405-99807424 None:intergenic 35.0%
CGAAATCCAACAACAAAACA+CGG + chr3.4:99806846-99806865 MS.gene063125:intron 35.0%
GAAATCCAACAACAAAACAC+GGG + chr3.4:99806847-99806866 MS.gene063125:intron 35.0%
GATCTCGAATCAAAAGTGAT+CGG + chr3.4:99806258-99806277 MS.gene063125:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + chr3.4:99807194-99807213 MS.gene063125:CDS 35.0%
GCTATTTGTCATATTGTGTG+TGG - chr3.4:99808442-99808461 None:intergenic 35.0%
GTCAGTTCTTTGACTCAAAT+TGG - chr3.4:99806234-99806253 None:intergenic 35.0%
GTGGTATTTGCATATGTTCA+CGG + chr3.4:99808280-99808299 MS.gene063125:intron 35.0%
GTTACACAGATAATGAGCAA+TGG + chr3.4:99808551-99808570 MS.gene063125:intron 35.0%
TACAATGAATTAGGTGGTGT+TGG + chr3.4:99805171-99805190 MS.gene063125:CDS 35.0%
TATAAGGTTAAGACGCATGA+GGG - chr3.4:99805788-99805807 None:intergenic 35.0%
TATTCAAGGGGATTTGAACT+CGG - chr3.4:99805545-99805564 None:intergenic 35.0%
TGGACGAAACAAGATACAAA+TGG + chr3.4:99805911-99805930 MS.gene063125:intron 35.0%
TGTAGATGGAGAAATGAGTT+TGG - chr3.4:99805256-99805275 None:intergenic 35.0%
TTAAATCTAGACTGTCCGAT+CGG - chr3.4:99805609-99805628 None:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - chr3.4:99805789-99805808 None:intergenic 35.0%
TTGAAATTCCTCTGATCTTC+CGG - chr3.4:99807336-99807355 None:intergenic 35.0%
TTTATCACTACTCTGTGTAC+TGG - chr3.4:99808590-99808609 None:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - chr3.4:99807368-99807387 None:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - chr3.4:99807808-99807827 None:intergenic 35.0%
! CATAGATATAAGCTTTGGTG+TGG - chr3.4:99808487-99808506 None:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - chr3.4:99807367-99807386 None:intergenic 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - chr3.4:99807366-99807385 None:intergenic 35.0%
! GTAACACATTCAAGTTCAAC+AGG - chr3.4:99808536-99808555 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr3.4:99806807-99806826 None:intergenic 35.0%
!! AGCTCTTGTTTGTGCTTTTT+GGG - chr3.4:99806546-99806565 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr3.4:99806258-99806277 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr3.4:99806259-99806278 None:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - chr3.4:99806547-99806566 None:intergenic 35.0%
!! TTTTAGGTGGTGATGTGTTT+TGG - chr3.4:99805994-99806013 None:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - chr3.4:99805977-99805996 None:intergenic 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - chr3.4:99806417-99806436 None:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - chr3.4:99806081-99806100 None:intergenic 35.0%
!!! GGTCTGTGAGTTTTATTTTG+AGG - chr3.4:99806095-99806114 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - chr3.4:99806082-99806101 None:intergenic 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - chr3.4:99805966-99805985 None:intergenic 35.0%
AAATATGCAAGGGAGCCAAA+CGG + chr3.4:99807228-99807247 MS.gene063125:CDS 40.0%
AAATCCCCTTGAATACGGTT+TGG + chr3.4:99805550-99805569 MS.gene063125:intron 40.0%
AGGTTATTCAATTGTGGTGG+GGG - chr3.4:99806712-99806731 None:intergenic 40.0%
AGTTTGGCAATGTCAACAAC+TGG - chr3.4:99805240-99805259 None:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - chr3.4:99807936-99807955 None:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - chr3.4:99806157-99806176 None:intergenic 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + chr3.4:99805116-99805135 MS.gene063125:CDS 40.0%
CAACCCAGATCATAAAAAGG+CGG + chr3.4:99806897-99806916 MS.gene063125:intron 40.0%
CACGATAGTATCAGAGATGA+AGG - chr3.4:99808179-99808198 None:intergenic 40.0%
CACGGCAAAAGTAGAAGAAT+CGG + chr3.4:99808298-99808317 MS.gene063125:intron 40.0%
CCACAACCCAGATCATAAAA+AGG + chr3.4:99806894-99806913 MS.gene063125:intron 40.0%
CCATATCCTTCAATACCGTT+TGG - chr3.4:99807246-99807265 None:intergenic 40.0%
CCCAAAAACCCAATGATTTC+AGG + chr3.4:99807364-99807383 MS.gene063125:CDS 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + chr3.4:99807966-99807985 MS.gene063125:CDS 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + chr3.4:99807161-99807180 MS.gene063125:CDS 40.0%
GAGGTTATTCAATTGTGGTG+GGG - chr3.4:99806713-99806732 None:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + chr3.4:99808038-99808057 MS.gene063125:CDS 40.0%
GATTGCTTCCTAAAGGAATG+TGG + chr3.4:99807834-99807853 MS.gene063125:CDS 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - chr3.4:99807040-99807059 None:intergenic 40.0%
GGAGGTTATTCAATTGTGGT+GGG - chr3.4:99806714-99806733 None:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + chr3.4:99806589-99806608 MS.gene063125:intron 40.0%
GTGATTCAGGCAATAAACCA+TGG + chr3.4:99807129-99807148 MS.gene063125:intron 40.0%
GTTTAGGTGTTTACGGAGTT+TGG - chr3.4:99806521-99806540 None:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - chr3.4:99806588-99806607 None:intergenic 40.0%
TATGGTGTACCGTCTATATG+CGG - chr3.4:99805939-99805958 None:intergenic 40.0%
TCGAAGACAGCAAAACCTTT+CGG - chr3.4:99807479-99807498 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr3.4:99806424-99806443 None:intergenic 40.0%
TGGAGGTTATTCAATTGTGG+TGG - chr3.4:99806715-99806734 None:intergenic 40.0%
TGTTAATGGGAACTTAGTGG+AGG - chr3.4:99807402-99807421 None:intergenic 40.0%
TTGGGTGGTTTAGGTGTTTA+CGG - chr3.4:99806528-99806547 None:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - chr3.4:99805976-99805995 None:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + chr3.4:99807243-99807262 MS.gene063125:CDS 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - chr3.4:99806897-99806916 None:intergenic 40.0%
! GCCCAACATTTAGTTGATGT+AGG - chr3.4:99808385-99808404 None:intergenic 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - chr3.4:99806793-99806812 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr3.4:99806802-99806821 None:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - chr3.4:99808038-99808057 None:intergenic 40.0%
!! CATTAATCACGAGAGCATCA+GGG - chr3.4:99808037-99808056 None:intergenic 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + chr3.4:99808056-99808075 MS.gene063125:intron 40.0%
!! TCGGCAGAGGTTGATATAAT+CGG + chr3.4:99805087-99805106 MS.gene063125:CDS 40.0%
!! TCTTGTTTGTGCTTTTTGGG+TGG - chr3.4:99806543-99806562 None:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - chr3.4:99805978-99805997 None:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - chr3.4:99806327-99806346 None:intergenic 40.0%
!!! TTGTGCTTTTTGGGTGGTTT+AGG - chr3.4:99806537-99806556 None:intergenic 40.0%
AAGACAGCAAAACCTTTCGG+TGG - chr3.4:99807476-99807495 None:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - chr3.4:99807900-99807919 None:intergenic 45.0%
AGATGCAACCTCTGTTACAC+GGG - chr3.4:99806587-99806606 None:intergenic 45.0%
AGGTGTTTACGGAGTTTGGA+GGG - chr3.4:99806517-99806536 None:intergenic 45.0%
CAGTCCAAACCGTATTCAAG+GGG - chr3.4:99805557-99805576 None:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - chr3.4:99807906-99807925 None:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + chr3.4:99807903-99807922 MS.gene063125:CDS 45.0%
CGGTGGAGGTTATTCAATTG+TGG - chr3.4:99806718-99806737 None:intergenic 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr3.4:99807845-99807864 None:intergenic 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + chr3.4:99805311-99805330 MS.gene063125:CDS 45.0%
GAGACAAGCTTGTCATACCA+TGG - chr3.4:99807149-99807168 None:intergenic 45.0%
GATCTCGAAGCCAAATGAAC+CGG + chr3.4:99806387-99806406 MS.gene063125:intron 45.0%
GCAGTCCAAACCGTATTCAA+GGG - chr3.4:99805558-99805577 None:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + chr3.4:99807160-99807179 MS.gene063125:CDS 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + chr3.4:99807827-99807846 MS.gene063125:CDS 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - chr3.4:99806135-99806154 None:intergenic 45.0%
TAAACCAGTCGACAGACTAG+TGG + chr3.4:99808670-99808689 MS.gene063125:CDS 45.0%
TAGGTGTTTACGGAGTTTGG+AGG - chr3.4:99806518-99806537 None:intergenic 45.0%
TGCAGTCCAAACCGTATTCA+AGG - chr3.4:99805559-99805578 None:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - chr3.4:99806152-99806171 None:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - chr3.4:99806064-99806083 None:intergenic 45.0%
TTCGAAATGTGGCTCAGCTT+GGG - chr3.4:99806124-99806143 None:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - chr3.4:99806065-99806084 None:intergenic 45.0%
TTTGCGCCTAGAACATGATC+AGG - chr3.4:99807912-99807931 None:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + chr3.4:99805568-99805587 MS.gene063125:intron 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - chr3.4:99806202-99806221 None:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - chr3.4:99806205-99806224 None:intergenic 45.0%
! GGTTCATTTGGCTTCGAGAT+CGG - chr3.4:99806388-99806407 None:intergenic 45.0%
! GTTCATTTGGCTTCGAGATC+GGG - chr3.4:99806387-99806406 None:intergenic 45.0%
! TTATTCAATTGTGGTGGGGG+TGG - chr3.4:99806709-99806728 None:intergenic 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + chr3.4:99805498-99805517 MS.gene063125:intron 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - chr3.4:99808029-99808048 None:intergenic 45.0%
!! AGGTGGTGATGTGTTTTGGA+GGG - chr3.4:99805990-99806009 None:intergenic 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr3.4:99805927-99805946 MS.gene063125:intron 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - chr3.4:99806640-99806659 None:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - chr3.4:99806633-99806652 None:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - chr3.4:99806637-99806656 None:intergenic 45.0%
!! TAGGTGGTGATGTGTTTTGG+AGG - chr3.4:99805991-99806010 None:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - chr3.4:99806790-99806809 None:intergenic 45.0%
!! TGATGATGTGTGTTGGTGGT+TGG - chr3.4:99806654-99806673 None:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - chr3.4:99806634-99806653 None:intergenic 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - chr3.4:99806413-99806432 None:intergenic 45.0%
!!! CAATTGGCCTTTTTCCCTGT+TGG - chr3.4:99808760-99808779 None:intergenic 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - chr3.4:99805957-99805976 None:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - chr3.4:99806326-99806345 None:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - chr3.4:99806325-99806344 None:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - chr3.4:99806414-99806433 None:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - chr3.4:99805963-99805982 None:intergenic 45.0%
!!! TGGGTGCATTTTTAGCCGAT+CGG + chr3.4:99805591-99805610 MS.gene063125:intron 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - chr3.4:99806324-99806343 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTGAAT+TGG + chr3.4:99805849-99805868 MS.gene063125:intron 5.0%
AACATGGACCCGTGTAACAG+AGG + chr3.4:99806576-99806595 MS.gene063125:intron 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr3.4:99806560-99806579 MS.gene063125:intron 50.0%
AGGTACATCCGGAAGATCAG+AGG + chr3.4:99807325-99807344 MS.gene063125:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - chr3.4:99805270-99805289 None:intergenic 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + chr3.4:99805300-99805319 MS.gene063125:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + chr3.4:99805299-99805318 MS.gene063125:CDS 50.0%
CGTCCATACATTGCGTCTTG+CGG - chr3.4:99805897-99805916 None:intergenic 50.0%
CTACTCTGTGTACTGGACTC+TGG - chr3.4:99808583-99808602 None:intergenic 50.0%
CTTCGAAATGTGGCTCAGCT+TGG - chr3.4:99806125-99806144 None:intergenic 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + chr3.4:99805572-99805591 MS.gene063125:intron 50.0%
GATCAGGCATAGGACATGGA+GGG - chr3.4:99807896-99807915 None:intergenic 50.0%
GTCCATACATTGCGTCTTGC+GGG - chr3.4:99805896-99805915 None:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - chr3.4:99806881-99806900 None:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + chr3.4:99805298-99805317 MS.gene063125:CDS 50.0%
TCCATACATTGCGTCTTGCG+GGG - chr3.4:99805895-99805914 None:intergenic 50.0%
TGATCAGGCATAGGACATGG+AGG - chr3.4:99807897-99807916 None:intergenic 50.0%
TTCTCCATCTACAGCACAGC+AGG + chr3.4:99805263-99805282 MS.gene063125:CDS 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + chr3.4:99807237-99807256 MS.gene063125:CDS 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - chr3.4:99806903-99806922 None:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + chr3.4:99807090-99807109 MS.gene063125:intron 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + chr3.4:99806141-99806160 MS.gene063125:intron 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - chr3.4:99806765-99806784 None:intergenic 50.0%
ATGTGGCTCAGCTTGGGTGT+TGG - chr3.4:99806118-99806137 None:intergenic 55.0%
CCAGTCGACAGACTAGTGGA+CGG + chr3.4:99808674-99808693 MS.gene063125:CDS 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - chr3.4:99805302-99805321 None:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - chr3.4:99806768-99806787 None:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + chr3.4:99805571-99805590 MS.gene063125:intron 55.0%
GGGTGAGTAGTGACAATGGG+CGG - chr3.4:99806061-99806080 None:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - chr3.4:99806194-99806213 None:intergenic 55.0%
TCCCCGCAAGACGCAATGTA+TGG + chr3.4:99805891-99805910 MS.gene063125:intron 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - chr3.4:99806622-99806641 None:intergenic 55.0%
TGAGTAGTGACAATGGGCGG+TGG - chr3.4:99806058-99806077 None:intergenic 55.0%
TGTGGCTCAGCTTGGGTGTT+GGG - chr3.4:99806117-99806136 None:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - chr3.4:99806381-99806400 None:intergenic 55.0%
! CAGTCGACAGACTAGTGGAC+GGG + chr3.4:99808675-99808694 MS.gene063125:CDS 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - chr3.4:99806904-99806923 None:intergenic 55.0%
! GGGGTGATGATGTGTGTTGG+TGG - chr3.4:99806658-99806677 None:intergenic 55.0%
! GTGGGGGTGATGATGTGTGT+TGG - chr3.4:99806661-99806680 None:intergenic 55.0%
! TTTCGGTGGGCCGGTTCATT+TGG - chr3.4:99806400-99806419 None:intergenic 55.0%
!! CGCTGCCCGTGTTTTGTTGT+TGG - chr3.4:99806855-99806874 None:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - chr3.4:99806679-99806698 None:intergenic 55.0%
GCGGCGTAGTGATGCAGTGA+TGG - chr3.4:99806771-99806790 None:intergenic 60.0%
GGCGCAAAGCCACATGCTGA+TGG + chr3.4:99807924-99807943 MS.gene063125:CDS 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - chr3.4:99806623-99806642 None:intergenic 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - chr3.4:99806380-99806399 None:intergenic 60.0%
! AGAATCGGTGGGTTCGGCAG+AGG + chr3.4:99805074-99805093 MS.gene063125:CDS 60.0%
! CCGTCCACTAGTCTGTCGAC+TGG - chr3.4:99808677-99808696 None:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - chr3.4:99806621-99806640 None:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - chr3.4:99806678-99806697 None:intergenic 60.0%
! GTGGCTCAGCTTGGGTGTTG+GGG - chr3.4:99806116-99806135 None:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - chr3.4:99806677-99806696 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr3.4:99806301-99806320 None:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - chr3.4:99806755-99806774 None:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - chr3.4:99806680-99806699 None:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - chr3.4:99806683-99806702 None:intergenic 60.0%
!!! TGTGCTGGTTTTCGGTGGGC+CGG - chr3.4:99806409-99806428 None:intergenic 60.0%
CAAAACACGGGCAGCGACGC+CGG + chr3.4:99806859-99806878 MS.gene063125:intron 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - chr3.4:99806379-99806398 None:intergenic 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - chr3.4:99806186-99806205 None:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - chr3.4:99806741-99806760 None:intergenic 65.0%
! TGGTGATGCAGTGGCGGTGG+AGG - chr3.4:99806732-99806751 None:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - chr3.4:99806752-99806771 None:intergenic 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + chr3.4:99806869-99806888 MS.gene063125:intron 65.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr3.4:99806318-99806337 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr3.4:99806319-99806338 None:intergenic 70.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr3.4:99806317-99806336 None:intergenic 70.0%
! CGGTGGTGATGCAGTGGCGG+TGG - chr3.4:99806735-99806754 None:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+CGG - chr3.4:99806738-99806757 None:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - chr3.4:99806693-99806712 None:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - chr3.4:99806696-99806715 None:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - chr3.4:99806699-99806718 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr3.4:99806305-99806324 MS.gene063125:intron 80.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 99805069 99808796 99805069 ID=MS.gene063125
chr3.4 mRNA 99805069 99808796 99805069 ID=MS.gene063125.t1;Parent=MS.gene063125
chr3.4 exon 99805069 99805332 99805069 ID=MS.gene063125.t1.exon1;Parent=MS.gene063125.t1
chr3.4 CDS 99805069 99805332 99805069 ID=cds.MS.gene063125.t1;Parent=MS.gene063125.t1
chr3.4 exon 99807138 99807385 99807138 ID=MS.gene063125.t1.exon2;Parent=MS.gene063125.t1
chr3.4 CDS 99807138 99807385 99807138 ID=cds.MS.gene063125.t1;Parent=MS.gene063125.t1
chr3.4 exon 99807746 99808073 99807746 ID=MS.gene063125.t1.exon3;Parent=MS.gene063125.t1
chr3.4 CDS 99807746 99808073 99807746 ID=cds.MS.gene063125.t1;Parent=MS.gene063125.t1
chr3.4 exon 99808560 99808796 99808560 ID=MS.gene063125.t1.exon4;Parent=MS.gene063125.t1
chr3.4 CDS 99808560 99808796 99808560 ID=cds.MS.gene063125.t1;Parent=MS.gene063125.t1
Gene Sequence

>MS.gene063125

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGATGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGGTCAACTTTTCTGTATTTTAATACCAACTGCTAATATTTTCTATTTAATTATATATACTTTTATTTCAGTTAAGTATTCCTCTTAACTTAGAAGATAGTATCAGGATTGTAATTATGATCGGATCTAACTTCGTGAGAAGAGACACTAAGATAGTTTGTTTGTTGTTTACGAGGTATCAGCTCAGTGGTAAGAGTTTGAGCTTAAGATACCGAGTTCAAATCCCCTTGAATACGGTTTGGACTGCAAGCAGTTCTTGGTGGGTGCATTTTTAGCCGATCGGACAGTCTAGATTTAAAGTAGATTTTATTACTTTTATTAAGTTTTGATGCAATCAAGATCCCATCAAATAAAGTTTTAGAATAATCATTATTGTCATTTTAACAAGAAAATATAATAAACATTGATCCTCTAAGTATAGTTGTATTAGAGAAGCACAATAATGCAGCTGCAGCCCTCATGCGTCTTAACCTTATAACTAATGTCCACTTTGTATATTTTATCTGTCCTGTTATGATTTTTTTTTTTTTTTTTGAATTGGCAAATATTATTAAACGTCATCCCCGCAAGACGCAATGTATGGACGAAACAAGATACAAATGGTGCCGCATATAGACGGTACACCATAACCACCTAAAAACACCCCTGAAGATAAACCCTCCAAAACACATCACCACCTAAAACAAACTCCAAAAAAAAAAAAACACTGTAAACACGATATATACCACCGCCCATTGTCACTACTCACCCACAAAGAACACCCTCAAAATAAAACTCACAGACCCCAACACCCAAGCTGAGCCACATTTCGAAGAGCACCTAACCGAAGAAGGATCATGCAGCTATCACAAACCTCGCGACCTCTGAACCACCGAAAGAGCACAACACAAAGCCCAAAAACCAATTTGAGTCAAAGAACTGACTCCCGATCTCGAATCAAAAGTGATCGGTCCACCAGACTATAATACCAAATTAGCAGGGCACCCCTCGCCCCCGGTACACCAGAGAAAAAACCAAATCAAGTCAAACAAAGATTGCAGCTAGACCCCGACTCCCGATCTCGAAGCCAAATGAACCGGCCCACCGAAAACCAGCACACAATATGTAAGACGAAAGACATGGCATGCGAAGTTTAAACAACAAACAAATCAAAAGGAAAATGCTCAACACAGCGTGACATGCACCCTCCAAACTCCGTAAACACCTAAACCACCCAAAAAGCACAAACAAGAGCTAGTGACGACGAACATGGACCCGTGTAACAGAGGTTGCATCTAAAGGAAATCACCCCAACAAGCACCCACCTCCTCACTTAAAACACCAACCACCAACACACATCATCACCCCCACCACACTTCACCACCACCACGCATCACCACCCCCACCACAATTGAATAACCTCCACCGCCACTGCATCACCACCGCGCAACACCACCACCATCACTGCATCACTACGCCGCCAAAACATCCTCACCAAGAAACAAGCAACAACACAAACATAAATCTAGAGGAAGACGAAATCCAACAACAAAACACGGGCAGCGACGCCGGTTTGAAGCGGAACCACAACCCAGATCATAAAAAGGCGGCCGCCTGTTATGATTTATTGATTTAAATTAGAGAATACGGTATAATCTGTTATTTGGATACTCAAGTAGTTCTATAATGATTCAAACCACGAAGTTGAATGTAAATATTAGATATGGCCTTTTCACAAACCCAAGAATGCTACTCTCAAATAATTTTTTTCTGGTACATATTGGTGGCTGAGTTCCAATGAGGTTCCTAATTATTTTGTGTGATTCAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCAGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGTATAAATTCTTACCTCCACTAAGTTCCCATTAACAATGAATATTCTTTTAATTGACATGAAGTAACTAATACTTTATTTAATAACTCCACCGAAAGGTTTTGCTGTCTTCGATATTCATACACTGTAAGCATTTAAATATCTTTTTAGTCCCTACAAATCTACTAATTTTGTTTTTAGTCTCTGTAAAACATTTTTTTTGTTTTTAATCCTTGCAAACGTACAATTTTTTGTTATTGGTCTTCACTATTTTTTGATTCCGAGTTCAAACTCTTAGATATTTGAAAGAAGATTGTAAACCATGACCGTTACACAATTATTTTCTCTATTACACGAACTATATATTTCATGTTCAATGCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGCAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTCCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGGTTGGTAATTAACTACTAACTAAGTTCTTTATCTTTGTTTGTTTAAACTTTTTGTTTTTACTTCCGTGTTTTCTGTTTTTATCTTCACTTCAACTGATATTTCCTTCATCTCTGATACTATCGTGATTAATGTTTCTACATCAGAACTTGTTTTAGAAATCTATGATGTGATTAAGTTTTCACGAGATTGTTATTTTCACTTTTTTGTGGTATTTGCATATGTTCACGGCAAAAGTAGAAGAATCGGTGTGCATGTTTTAATTCAAATTTACATCAACTAAATATTGAACACCTGCAAATATGAAAAACCTACATCAACTAAATGTTGGGCATCTTAGATATGACGATCTTACTATTTCATTCATCCACACACAATATGACAAATAGCAAGCTTGTCTATAGATTTAGTACCACACCAAAGCTTATATCTATGATATATAACTGATAGGATTGACACAACCTGTTGAACTTGAATGTGTTACACAGATAATGAGCAATGGAATTTTCCAGAGTCCAGTACACAGAGTAGTGATAAATGAAGAAAAGGAAAGGCTCACAGTAGCAATGTTCTGCATCCCAGATTCAGAACAAGAGATTAAACCAGTCGACAGACTAGTGGACGGGACAAAGCCAATATTATACAGACCAGTGAAAAACTATGTTGATTTATACTTTCAATATTACCAACAGGGAAAAAGGCCAATTGAAGCTTCCAAAATTTAA
Protein sequence

>MS.gene063125.t1

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFRDALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDQRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGAKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEIMSNGIFQSPVHRVVINEEKERLTVAMFCIPDSEQEIKPVDRLVDGTKPILYRPVKNYVDLYFQYYQQGKRPIEASKI