Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59930.t1 | XP_013444533.1 | 62.9 | 340 | 8 | 2 | 1 | 222 | 4 | 343 | 3.10E-107 | 397.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59930.t1 | Q9ZSA7 | 39.1 | 340 | 87 | 3 | 2 | 221 | 5 | 344 | 8.3e-61 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59930.t1 | A0A072TNY3 | 62.9 | 340 | 8 | 2 | 1 | 222 | 4 | 343 | 2.2e-107 | 397.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35159 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene68180 | PPI |
| MS.gene012107 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene063124 | PPI |
| MS.gene59930 | MS.gene028298 | PPI |
| MS.gene59930 | MS.gene012106 | PPI |
| MS.gene59930 | MS.gene68178 | PPI |
| MS.gene59930 | MS.gene44249 | PPI |
| MS.gene59930 | MS.gene023156 | PPI |
| MS.gene59930 | MS.gene23787 | PPI |
| MS.gene59930 | MS.gene026406 | PPI |
| MS.gene59930 | MS.gene81083 | PPI |
| MS.gene59930 | MS.gene96237 | PPI |
| MS.gene59930 | MS.gene017642 | PPI |
| MS.gene59930 | MS.gene014238 | PPI |
| MS.gene44248 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene040837 | PPI |
| MS.gene004422 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene061671 | PPI |
| MS.gene59930 | MS.gene063125 | PPI |
| MS.gene68181 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene36494 | PPI |
| MS.gene59930 | MS.gene017546 | PPI |
| MS.gene59930 | MS.gene061056 | PPI |
| MS.gene59930 | MS.gene89655 | PPI |
| MS.gene59930 | MS.gene89654 | PPI |
| MS.gene59930 | MS.gene68775 | PPI |
| MS.gene08507 | MS.gene59930 | PPI |
| MS.gene002734 | MS.gene59930 | PPI |
| MS.gene59930 | MS.gene014239 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59930.t1 | MTR_8g024120 | 97.386 | 153 | 4 | 0 | 1 | 153 | 4 | 156 | 3.61e-108 | 315 |
| MS.gene59930.t1 | MTR_8g024120 | 88.000 | 75 | 4 | 1 | 153 | 222 | 269 | 343 | 7.91e-39 | 137 |
| MS.gene59930.t1 | MTR_3g092890 | 56.835 | 139 | 56 | 2 | 15 | 153 | 15 | 149 | 4.94e-51 | 169 |
| MS.gene59930.t1 | MTR_3g092890 | 46.575 | 73 | 34 | 1 | 154 | 221 | 264 | 336 | 1.67e-14 | 71.6 |
| MS.gene59930.t1 | MTR_1g062110 | 43.836 | 146 | 78 | 2 | 12 | 153 | 35 | 180 | 6.22e-36 | 129 |
| MS.gene59930.t1 | MTR_1g062110 | 43.836 | 146 | 78 | 2 | 12 | 153 | 35 | 180 | 1.51e-35 | 129 |
| MS.gene59930.t1 | MTR_1g070135 | 42.581 | 155 | 85 | 3 | 1 | 153 | 1 | 153 | 5.77e-34 | 123 |
| MS.gene59930.t1 | MTR_1g070135 | 42.581 | 155 | 85 | 3 | 1 | 153 | 1 | 153 | 9.33e-34 | 124 |
| MS.gene59930.t1 | MTR_7g081710 | 37.931 | 145 | 89 | 1 | 12 | 155 | 22 | 166 | 2.37e-33 | 123 |
| MS.gene59930.t1 | MTR_1g070120 | 40.000 | 155 | 89 | 3 | 1 | 153 | 1 | 153 | 6.04e-33 | 121 |
| MS.gene59930.t1 | MTR_1g048940 | 37.415 | 147 | 87 | 2 | 11 | 155 | 20 | 163 | 5.82e-32 | 119 |
| MS.gene59930.t1 | MTR_1g070080 | 37.662 | 154 | 94 | 2 | 1 | 153 | 1 | 153 | 7.11e-29 | 110 |
| MS.gene59930.t1 | MTR_7g102820 | 36.000 | 150 | 85 | 2 | 12 | 153 | 35 | 181 | 4.01e-28 | 109 |
| MS.gene59930.t1 | MTR_5g065010 | 38.889 | 144 | 80 | 3 | 12 | 152 | 13 | 151 | 5.72e-26 | 103 |
| MS.gene59930.t1 | MTR_5g082750 | 34.899 | 149 | 90 | 4 | 10 | 153 | 20 | 166 | 6.12e-24 | 98.2 |
| MS.gene59930.t1 | MTR_1g070085 | 33.103 | 145 | 95 | 2 | 10 | 153 | 9 | 152 | 8.67e-23 | 94.7 |
| MS.gene59930.t1 | MTR_1g070085 | 33.103 | 145 | 95 | 2 | 10 | 153 | 9 | 152 | 8.67e-23 | 94.7 |
| MS.gene59930.t1 | MTR_7g016090 | 33.113 | 151 | 96 | 3 | 4 | 153 | 7 | 153 | 2.54e-22 | 93.2 |
| MS.gene59930.t1 | MTR_7g016090 | 33.113 | 151 | 96 | 3 | 4 | 153 | 5 | 151 | 2.58e-22 | 93.2 |
| MS.gene59930.t1 | MTR_7g068650 | 33.987 | 153 | 90 | 5 | 10 | 153 | 21 | 171 | 7.92e-22 | 92.4 |
| MS.gene59930.t1 | MTR_6g015950 | 32.237 | 152 | 97 | 3 | 4 | 153 | 5 | 152 | 3.08e-21 | 90.5 |
| MS.gene59930.t1 | MTR_3g070860 | 32.414 | 145 | 93 | 3 | 13 | 153 | 24 | 167 | 6.62e-21 | 89.7 |
| MS.gene59930.t1 | MTR_3g091360 | 35.766 | 137 | 80 | 3 | 38 | 170 | 51 | 183 | 1.03e-20 | 89.4 |
| MS.gene59930.t1 | MTR_3g058610 | 34.591 | 159 | 94 | 7 | 1 | 153 | 1 | 155 | 1.76e-20 | 88.6 |
| MS.gene59930.t1 | MTR_5g032880 | 41.353 | 133 | 73 | 4 | 18 | 146 | 356 | 487 | 3.31e-20 | 89.0 |
| MS.gene59930.t1 | MTR_5g032880 | 38.060 | 134 | 72 | 4 | 18 | 148 | 18 | 143 | 2.56e-17 | 80.5 |
| MS.gene59930.t1 | MTR_5g022020 | 29.907 | 214 | 115 | 7 | 9 | 191 | 10 | 219 | 3.39e-20 | 87.8 |
| MS.gene59930.t1 | MTR_4g015790 | 32.716 | 162 | 89 | 5 | 10 | 153 | 20 | 179 | 4.06e-20 | 87.8 |
| MS.gene59930.t1 | MTR_7g016080 | 32.237 | 152 | 98 | 3 | 4 | 153 | 5 | 153 | 5.73e-20 | 86.7 |
| MS.gene59930.t1 | MTR_5g032870 | 41.176 | 136 | 69 | 4 | 18 | 146 | 18 | 149 | 1.97e-19 | 85.5 |
| MS.gene59930.t1 | MTR_3g088565 | 34.437 | 151 | 76 | 7 | 38 | 176 | 2 | 141 | 2.23e-19 | 84.7 |
| MS.gene59930.t1 | MTR_3g043900 | 39.855 | 138 | 72 | 6 | 15 | 147 | 29 | 160 | 5.93e-19 | 84.3 |
| MS.gene59930.t1 | MTR_8g075890 | 32.168 | 143 | 90 | 5 | 15 | 153 | 16 | 155 | 6.03e-19 | 84.3 |
| MS.gene59930.t1 | MTR_8g075830 | 33.333 | 141 | 87 | 5 | 17 | 153 | 18 | 155 | 1.22e-18 | 83.6 |
| MS.gene59930.t1 | MTR_3g091350 | 34.247 | 146 | 82 | 6 | 15 | 153 | 35 | 173 | 5.53e-18 | 81.6 |
| MS.gene59930.t1 | MTR_2g068850 | 34.286 | 140 | 85 | 5 | 10 | 146 | 28 | 163 | 8.07e-18 | 79.3 |
| MS.gene59930.t1 | MTR_3g026150 | 32.308 | 195 | 117 | 8 | 15 | 204 | 35 | 219 | 1.13e-17 | 79.7 |
| MS.gene59930.t1 | MTR_3g026150 | 33.520 | 179 | 106 | 8 | 3 | 175 | 22 | 193 | 2.00e-17 | 80.1 |
| MS.gene59930.t1 | MTR_3g045230 | 36.496 | 137 | 77 | 5 | 16 | 147 | 30 | 161 | 3.61e-17 | 79.3 |
| MS.gene59930.t1 | MTR_2g068840 | 34.286 | 140 | 85 | 5 | 10 | 146 | 28 | 163 | 4.83e-17 | 79.0 |
| MS.gene59930.t1 | MTR_3g063180 | 32.886 | 149 | 86 | 5 | 10 | 152 | 16 | 156 | 6.02e-17 | 78.6 |
| MS.gene59930.t1 | MTR_7g062570 | 33.333 | 147 | 85 | 7 | 13 | 153 | 29 | 168 | 4.10e-16 | 76.3 |
| MS.gene59930.t1 | MTR_2g068960 | 32.479 | 117 | 77 | 1 | 32 | 146 | 56 | 172 | 5.32e-16 | 76.3 |
| MS.gene59930.t1 | MTR_7g062550 | 33.094 | 139 | 90 | 3 | 15 | 152 | 36 | 172 | 1.19e-15 | 75.1 |
| MS.gene59930.t1 | MTR_2g068950 | 33.333 | 111 | 72 | 1 | 38 | 146 | 62 | 172 | 1.91e-15 | 74.3 |
| MS.gene59930.t1 | MTR_1g070185 | 30.345 | 145 | 94 | 2 | 8 | 152 | 38 | 175 | 2.51e-15 | 74.3 |
| MS.gene59930.t1 | MTR_2g069300 | 39.785 | 93 | 54 | 1 | 39 | 129 | 54 | 146 | 2.54e-15 | 73.9 |
| MS.gene59930.t1 | MTR_7g029655 | 32.258 | 93 | 62 | 1 | 39 | 131 | 67 | 158 | 4.42e-15 | 73.6 |
| MS.gene59930.t1 | MTR_1g032220 | 29.577 | 142 | 90 | 3 | 10 | 146 | 43 | 179 | 5.46e-15 | 73.2 |
| MS.gene59930.t1 | MTR_1g093120 | 29.082 | 196 | 118 | 5 | 38 | 222 | 66 | 251 | 5.74e-15 | 73.2 |
| MS.gene59930.t1 | MTR_8g041600 | 37.500 | 104 | 61 | 1 | 38 | 137 | 67 | 170 | 6.39e-15 | 72.4 |
| MS.gene59930.t1 | MTR_2g069070 | 32.353 | 102 | 67 | 1 | 38 | 137 | 48 | 149 | 8.33e-15 | 70.5 |
| MS.gene59930.t1 | MTR_7g045650 | 33.103 | 145 | 86 | 5 | 14 | 153 | 35 | 173 | 8.89e-15 | 72.4 |
| MS.gene59930.t1 | MTR_7g062580 | 31.690 | 142 | 92 | 4 | 14 | 153 | 30 | 168 | 8.94e-15 | 72.4 |
| MS.gene59930.t1 | MTR_5g055690 | 32.759 | 116 | 76 | 2 | 39 | 153 | 47 | 161 | 9.28e-15 | 71.6 |
| MS.gene59930.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 38 | 137 | 26 | 127 | 9.31e-15 | 71.6 |
| MS.gene59930.t1 | MTR_8g041600 | 37.500 | 104 | 61 | 1 | 38 | 137 | 67 | 170 | 1.00e-14 | 72.4 |
| MS.gene59930.t1 | MTR_1g032250 | 30.435 | 138 | 94 | 2 | 10 | 146 | 43 | 179 | 1.13e-14 | 72.4 |
| MS.gene59930.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 38 | 137 | 48 | 149 | 1.55e-14 | 71.6 |
| MS.gene59930.t1 | MTR_1g032140 | 30.435 | 138 | 94 | 2 | 10 | 146 | 36 | 172 | 1.63e-14 | 71.6 |
| MS.gene59930.t1 | MTR_2g069010 | 32.353 | 102 | 67 | 1 | 38 | 137 | 68 | 169 | 1.78e-14 | 71.6 |
| MS.gene59930.t1 | MTR_0032s0040 | 32.824 | 131 | 78 | 5 | 10 | 131 | 34 | 163 | 1.88e-14 | 71.6 |
| MS.gene59930.t1 | MTR_5g055690 | 32.759 | 116 | 76 | 2 | 39 | 153 | 47 | 161 | 2.06e-14 | 71.6 |
| MS.gene59930.t1 | MTR_2g069020 | 31.532 | 111 | 74 | 1 | 38 | 146 | 66 | 176 | 4.66e-14 | 70.5 |
| MS.gene59930.t1 | MTR_4g093840 | 32.051 | 156 | 84 | 6 | 37 | 177 | 60 | 208 | 5.05e-14 | 70.5 |
| MS.gene59930.t1 | MTR_2g069020 | 31.532 | 111 | 74 | 1 | 38 | 146 | 66 | 176 | 5.36e-14 | 70.5 |
| MS.gene59930.t1 | MTR_2g068800 | 30.657 | 137 | 75 | 3 | 10 | 146 | 28 | 144 | 5.72e-14 | 69.7 |
| MS.gene59930.t1 | MTR_2g437380 | 29.577 | 142 | 87 | 6 | 15 | 149 | 28 | 163 | 6.41e-14 | 70.1 |
| MS.gene59930.t1 | MTR_3g072810 | 29.487 | 156 | 101 | 5 | 1 | 153 | 3 | 152 | 6.99e-14 | 69.7 |
| MS.gene59930.t1 | MTR_5g055820 | 31.613 | 155 | 101 | 5 | 1 | 153 | 9 | 160 | 7.31e-14 | 69.7 |
| MS.gene59930.t1 | MTR_5g048470 | 30.994 | 171 | 104 | 7 | 3 | 163 | 16 | 182 | 8.89e-14 | 69.7 |
| MS.gene59930.t1 | MTR_7g062600 | 31.206 | 141 | 92 | 4 | 15 | 153 | 27 | 164 | 1.28e-13 | 69.3 |
| MS.gene59930.t1 | MTR_8g028435 | 30.496 | 141 | 89 | 4 | 2 | 137 | 25 | 161 | 1.47e-13 | 68.9 |
| MS.gene59930.t1 | MTR_7g105070 | 29.710 | 138 | 96 | 1 | 10 | 146 | 30 | 167 | 2.02e-13 | 68.6 |
| MS.gene59930.t1 | MTR_7g056370 | 31.852 | 135 | 85 | 3 | 8 | 138 | 16 | 147 | 2.67e-13 | 67.0 |
| MS.gene59930.t1 | MTR_8g064200 | 29.677 | 155 | 101 | 5 | 3 | 153 | 21 | 171 | 2.68e-13 | 68.2 |
| MS.gene59930.t1 | MTR_2g069210 | 35.644 | 101 | 63 | 1 | 39 | 137 | 64 | 164 | 2.97e-13 | 68.2 |
| MS.gene59930.t1 | MTR_8g064200 | 29.677 | 155 | 101 | 5 | 3 | 153 | 16 | 166 | 3.01e-13 | 68.2 |
| MS.gene59930.t1 | MTR_8g041620 | 35.577 | 104 | 63 | 1 | 38 | 137 | 67 | 170 | 5.05e-13 | 67.4 |
| MS.gene59930.t1 | MTR_1g034140 | 28.205 | 156 | 91 | 4 | 12 | 153 | 1 | 149 | 5.37e-13 | 67.4 |
| MS.gene59930.t1 | MTR_4g099380 | 30.597 | 134 | 83 | 3 | 8 | 137 | 142 | 269 | 5.76e-13 | 66.6 |
| MS.gene59930.t1 | MTR_7g102720 | 34.545 | 110 | 67 | 3 | 38 | 146 | 36 | 141 | 6.38e-13 | 67.0 |
| MS.gene59930.t1 | MTR_1g093110 | 30.693 | 101 | 68 | 1 | 39 | 137 | 70 | 170 | 1.18e-12 | 66.6 |
| MS.gene59930.t1 | MTR_5g059130 | 33.333 | 144 | 85 | 5 | 15 | 153 | 20 | 157 | 1.44e-12 | 66.2 |
| MS.gene59930.t1 | MTR_1g093140 | 27.778 | 126 | 89 | 1 | 14 | 137 | 48 | 173 | 1.57e-12 | 66.2 |
| MS.gene59930.t1 | MTR_3g072820 | 28.873 | 142 | 94 | 4 | 15 | 153 | 18 | 155 | 1.71e-12 | 65.9 |
| MS.gene59930.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 1.93e-12 | 65.9 |
| MS.gene59930.t1 | MTR_1g086550 | 33.028 | 109 | 65 | 2 | 29 | 137 | 10 | 110 | 1.99e-12 | 65.9 |
| MS.gene59930.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 2.00e-12 | 65.9 |
| MS.gene59930.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 39 | 129 | 94 | 186 | 2.06e-12 | 65.5 |
| MS.gene59930.t1 | MTR_8g009090 | 31.481 | 108 | 70 | 2 | 26 | 129 | 46 | 153 | 2.19e-12 | 65.9 |
| MS.gene59930.t1 | MTR_2g069190 | 29.104 | 134 | 83 | 2 | 39 | 170 | 68 | 191 | 2.39e-12 | 65.5 |
| MS.gene59930.t1 | MTR_8g008930 | 30.769 | 117 | 76 | 3 | 26 | 137 | 46 | 162 | 3.93e-12 | 65.1 |
| MS.gene59930.t1 | MTR_5g048850 | 29.032 | 155 | 105 | 5 | 1 | 153 | 9 | 160 | 3.95e-12 | 64.3 |
| MS.gene59930.t1 | MTR_8g009160 | 29.464 | 112 | 76 | 1 | 39 | 147 | 60 | 171 | 4.44e-12 | 64.7 |
| MS.gene59930.t1 | MTR_2g069090 | 34.409 | 93 | 59 | 1 | 39 | 129 | 68 | 160 | 4.81e-12 | 64.7 |
| MS.gene59930.t1 | MTR_5g048850 | 29.032 | 155 | 105 | 5 | 1 | 153 | 9 | 160 | 6.30e-12 | 64.3 |
| MS.gene59930.t1 | MTR_0009s0410 | 29.032 | 155 | 105 | 5 | 1 | 153 | 8 | 159 | 7.74e-12 | 62.0 |
| MS.gene59930.t1 | MTR_8g063070 | 31.858 | 113 | 75 | 1 | 36 | 146 | 64 | 176 | 1.01e-11 | 63.9 |
| MS.gene59930.t1 | MTR_8g062600 | 31.373 | 102 | 68 | 1 | 38 | 137 | 66 | 167 | 1.17e-11 | 63.5 |
| MS.gene59930.t1 | MTR_5g011250 | 27.389 | 157 | 97 | 7 | 9 | 152 | 13 | 165 | 1.17e-11 | 63.5 |
| MS.gene59930.t1 | MTR_1g070110 | 41.892 | 74 | 42 | 1 | 81 | 153 | 4 | 77 | 1.29e-11 | 62.4 |
| MS.gene59930.t1 | MTR_0328s0030 | 28.387 | 155 | 106 | 5 | 1 | 153 | 7 | 158 | 1.58e-11 | 63.2 |
| MS.gene59930.t1 | MTR_5g048550 | 31.579 | 133 | 82 | 4 | 11 | 140 | 20 | 146 | 1.72e-11 | 63.2 |
| MS.gene59930.t1 | MTR_2g072890 | 31.081 | 148 | 94 | 6 | 10 | 153 | 24 | 167 | 1.82e-11 | 63.2 |
| MS.gene59930.t1 | MTR_5g059140 | 30.556 | 144 | 91 | 4 | 15 | 153 | 18 | 157 | 2.05e-11 | 62.8 |
| MS.gene59930.t1 | MTR_8g009110 | 29.126 | 103 | 70 | 1 | 38 | 137 | 59 | 161 | 2.51e-11 | 62.8 |
| MS.gene59930.t1 | MTR_7g056347 | 31.373 | 102 | 68 | 1 | 38 | 137 | 66 | 167 | 2.51e-11 | 62.8 |
| MS.gene59930.t1 | MTR_7g056393 | 29.412 | 102 | 70 | 1 | 38 | 137 | 66 | 167 | 3.85e-11 | 62.0 |
| MS.gene59930.t1 | MTR_3g040410 | 32.773 | 119 | 71 | 3 | 39 | 153 | 6 | 119 | 4.79e-11 | 61.6 |
| MS.gene59930.t1 | MTR_1g034060 | 36.364 | 99 | 53 | 3 | 15 | 105 | 4 | 100 | 5.59e-11 | 61.6 |
| MS.gene59930.t1 | MTR_1g034120 | 36.364 | 99 | 53 | 3 | 15 | 105 | 4 | 100 | 5.64e-11 | 61.6 |
| MS.gene59930.t1 | MTR_4g024660 | 29.060 | 117 | 71 | 2 | 38 | 152 | 66 | 172 | 6.98e-11 | 61.2 |
| MS.gene59930.t1 | MTR_3g040430 | 42.647 | 68 | 35 | 1 | 39 | 102 | 6 | 73 | 9.73e-11 | 57.8 |
| MS.gene59930.t1 | MTR_5g055800 | 29.134 | 127 | 87 | 3 | 12 | 138 | 21 | 144 | 1.00e-10 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59930.t1 | AT4G10490 | 56.897 | 174 | 71 | 1 | 2 | 171 | 5 | 178 | 2.07e-65 | 206 |
| MS.gene59930.t1 | AT4G10490 | 51.948 | 77 | 30 | 2 | 153 | 222 | 269 | 345 | 3.65e-19 | 84.7 |
| MS.gene59930.t1 | AT4G10500 | 55.172 | 174 | 73 | 2 | 2 | 171 | 8 | 180 | 3.51e-62 | 197 |
| MS.gene59930.t1 | AT4G10500 | 50.000 | 76 | 32 | 2 | 153 | 222 | 271 | 346 | 3.53e-18 | 82.0 |
| MS.gene59930.t1 | AT5G24530 | 53.595 | 153 | 64 | 4 | 4 | 153 | 1 | 149 | 1.13e-52 | 173 |
| MS.gene59930.t1 | AT5G24530 | 41.333 | 75 | 36 | 1 | 154 | 220 | 264 | 338 | 1.20e-11 | 63.5 |
| MS.gene59930.t1 | AT2G36690 | 42.857 | 147 | 79 | 1 | 12 | 153 | 29 | 175 | 2.67e-33 | 123 |
| MS.gene59930.t1 | AT2G36690 | 42.857 | 147 | 79 | 1 | 12 | 153 | 29 | 175 | 2.67e-33 | 123 |
| MS.gene59930.t1 | AT3G60290 | 35.260 | 173 | 102 | 3 | 14 | 176 | 26 | 198 | 4.53e-31 | 117 |
| MS.gene59930.t1 | AT2G44800 | 33.333 | 177 | 108 | 3 | 10 | 176 | 22 | 198 | 1.32e-30 | 115 |
| MS.gene59930.t1 | AT5G07480 | 34.694 | 147 | 90 | 2 | 11 | 155 | 20 | 162 | 7.59e-27 | 105 |
| MS.gene59930.t1 | AT5G05600 | 32.886 | 149 | 93 | 4 | 10 | 153 | 33 | 179 | 1.01e-20 | 88.2 |
| MS.gene59930.t1 | AT5G05600 | 32.886 | 149 | 93 | 4 | 10 | 153 | 33 | 179 | 3.93e-20 | 87.8 |
| MS.gene59930.t1 | AT3G55970 | 31.579 | 152 | 86 | 6 | 10 | 149 | 20 | 165 | 2.72e-18 | 82.0 |
| MS.gene59930.t1 | AT1G55290 | 34.328 | 134 | 83 | 3 | 15 | 146 | 37 | 167 | 3.11e-18 | 82.4 |
| MS.gene59930.t1 | AT3G13610 | 31.159 | 138 | 91 | 2 | 10 | 146 | 33 | 167 | 3.43e-18 | 82.4 |
| MS.gene59930.t1 | AT3G51240 | 28.846 | 156 | 104 | 5 | 1 | 152 | 1 | 153 | 8.51e-18 | 81.3 |
| MS.gene59930.t1 | AT3G55970 | 31.579 | 152 | 86 | 6 | 10 | 149 | 20 | 165 | 9.17e-18 | 81.3 |
| MS.gene59930.t1 | AT3G11180 | 34.000 | 150 | 90 | 6 | 10 | 153 | 62 | 208 | 9.45e-18 | 81.3 |
| MS.gene59930.t1 | AT1G06620 | 36.275 | 102 | 63 | 1 | 38 | 137 | 61 | 162 | 1.22e-17 | 79.7 |
| MS.gene59930.t1 | AT3G11180 | 34.000 | 150 | 90 | 6 | 10 | 153 | 62 | 208 | 1.30e-17 | 80.9 |
| MS.gene59930.t1 | AT3G12900 | 33.333 | 138 | 90 | 2 | 10 | 146 | 28 | 164 | 1.64e-17 | 80.5 |
| MS.gene59930.t1 | AT1G06620 | 36.275 | 102 | 63 | 1 | 38 | 137 | 61 | 162 | 2.49e-17 | 79.7 |
| MS.gene59930.t1 | AT5G12270 | 33.333 | 141 | 84 | 5 | 11 | 147 | 29 | 163 | 4.48e-16 | 76.3 |
| MS.gene59930.t1 | AT5G08640 | 30.496 | 141 | 93 | 3 | 15 | 153 | 19 | 156 | 1.64e-15 | 74.3 |
| MS.gene59930.t1 | AT5G08640 | 30.496 | 141 | 93 | 3 | 15 | 153 | 19 | 156 | 1.64e-15 | 74.3 |
| MS.gene59930.t1 | AT3G19000 | 27.778 | 162 | 94 | 4 | 12 | 153 | 1 | 159 | 1.44e-14 | 71.2 |
| MS.gene59930.t1 | AT3G19000 | 27.778 | 162 | 94 | 4 | 12 | 153 | 1 | 159 | 1.75e-14 | 71.6 |
| MS.gene59930.t1 | AT5G63590 | 33.898 | 118 | 74 | 3 | 39 | 152 | 9 | 126 | 2.31e-14 | 70.9 |
| MS.gene59930.t1 | AT2G38240 | 29.787 | 141 | 94 | 4 | 15 | 153 | 23 | 160 | 2.33e-14 | 71.2 |
| MS.gene59930.t1 | AT1G17020 | 28.144 | 167 | 115 | 4 | 3 | 165 | 15 | 180 | 4.79e-14 | 70.5 |
| MS.gene59930.t1 | AT2G30830 | 33.333 | 105 | 67 | 1 | 36 | 137 | 51 | 155 | 5.37e-14 | 70.5 |
| MS.gene59930.t1 | AT1G03410 | 28.966 | 145 | 98 | 3 | 8 | 147 | 24 | 168 | 7.55e-14 | 70.1 |
| MS.gene59930.t1 | AT4G25300 | 29.940 | 167 | 112 | 4 | 3 | 165 | 14 | 179 | 8.55e-14 | 69.7 |
| MS.gene59930.t1 | AT1G03410 | 28.966 | 145 | 98 | 3 | 8 | 147 | 61 | 205 | 9.03e-14 | 69.7 |
| MS.gene59930.t1 | AT3G61400 | 30.216 | 139 | 82 | 3 | 10 | 137 | 31 | 165 | 1.10e-13 | 68.9 |
| MS.gene59930.t1 | AT3G61400 | 30.216 | 139 | 82 | 3 | 10 | 137 | 31 | 165 | 1.87e-13 | 68.9 |
| MS.gene59930.t1 | AT1G77330 | 32.432 | 111 | 70 | 2 | 38 | 148 | 2 | 107 | 5.53e-13 | 67.0 |
| MS.gene59930.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 7.11e-13 | 67.0 |
| MS.gene59930.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 7.23e-13 | 67.0 |
| MS.gene59930.t1 | AT2G30840 | 31.111 | 135 | 88 | 3 | 8 | 137 | 25 | 159 | 7.44e-13 | 66.6 |
| MS.gene59930.t1 | AT1G04350 | 30.469 | 128 | 86 | 3 | 12 | 137 | 30 | 156 | 7.92e-13 | 67.0 |
| MS.gene59930.t1 | AT3G19010 | 27.329 | 161 | 94 | 5 | 37 | 181 | 26 | 179 | 2.12e-12 | 65.5 |
| MS.gene59930.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 3.66e-12 | 64.7 |
| MS.gene59930.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 4.00e-12 | 64.3 |
| MS.gene59930.t1 | AT1G17010 | 28.846 | 156 | 105 | 5 | 3 | 153 | 15 | 169 | 5.32e-12 | 64.7 |
| MS.gene59930.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 38 | 137 | 63 | 165 | 5.82e-12 | 64.7 |
| MS.gene59930.t1 | AT5G63580 | 32.500 | 120 | 70 | 4 | 38 | 153 | 18 | 130 | 9.12e-12 | 63.2 |
| MS.gene59930.t1 | AT5G63580 | 32.500 | 120 | 70 | 4 | 38 | 153 | 18 | 130 | 1.00e-11 | 63.2 |
| MS.gene59930.t1 | AT1G02400 | 32.692 | 104 | 63 | 2 | 34 | 137 | 19 | 115 | 1.01e-11 | 63.2 |
| MS.gene59930.t1 | AT1G02400 | 32.692 | 104 | 63 | 2 | 34 | 137 | 19 | 115 | 1.02e-11 | 63.5 |
| MS.gene59930.t1 | AT5G63595 | 29.545 | 132 | 81 | 5 | 26 | 153 | 9 | 132 | 1.02e-11 | 63.2 |
| MS.gene59930.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.13e-11 | 63.2 |
| MS.gene59930.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.25e-11 | 63.5 |
| MS.gene59930.t1 | AT3G19010 | 28.788 | 132 | 76 | 3 | 37 | 153 | 26 | 154 | 1.25e-11 | 63.5 |
| MS.gene59930.t1 | AT1G03400 | 27.273 | 110 | 74 | 1 | 38 | 147 | 55 | 158 | 1.26e-11 | 63.5 |
| MS.gene59930.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 38 | 129 | 63 | 157 | 1.31e-11 | 63.2 |
| MS.gene59930.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 38 | 129 | 63 | 157 | 1.59e-11 | 63.2 |
| MS.gene59930.t1 | AT2G25450 | 33.684 | 95 | 61 | 1 | 39 | 131 | 55 | 149 | 1.64e-11 | 63.2 |
| MS.gene59930.t1 | AT1G03400 | 27.273 | 110 | 74 | 1 | 38 | 147 | 55 | 158 | 1.79e-11 | 63.2 |
| MS.gene59930.t1 | AT1G06645 | 33.010 | 103 | 66 | 1 | 38 | 137 | 76 | 178 | 1.81e-11 | 63.2 |
| MS.gene59930.t1 | AT5G63600 | 27.350 | 117 | 74 | 4 | 39 | 153 | 33 | 140 | 2.24e-11 | 62.8 |
| MS.gene59930.t1 | AT5G63600 | 27.350 | 117 | 74 | 4 | 39 | 153 | 33 | 140 | 2.42e-11 | 62.4 |
| MS.gene59930.t1 | AT1G78550 | 27.097 | 155 | 108 | 4 | 3 | 153 | 15 | 168 | 2.45e-11 | 62.8 |
| MS.gene59930.t1 | AT4G16330 | 29.752 | 121 | 75 | 4 | 38 | 153 | 66 | 181 | 2.55e-11 | 62.8 |
| MS.gene59930.t1 | AT4G25420 | 34.444 | 90 | 54 | 2 | 14 | 101 | 39 | 125 | 5.10e-11 | 61.6 |
| MS.gene59930.t1 | AT4G25420 | 29.167 | 120 | 79 | 3 | 14 | 131 | 39 | 154 | 6.11e-11 | 61.2 |
| MS.gene59930.t1 | AT5G43935 | 30.508 | 118 | 76 | 4 | 36 | 152 | 16 | 128 | 7.04e-11 | 60.8 |
| MS.gene59930.t1 | AT5G51810 | 28.346 | 127 | 85 | 3 | 8 | 134 | 35 | 155 | 7.70e-11 | 60.8 |
| MS.gene59930.t1 | AT5G51810 | 28.346 | 127 | 85 | 3 | 8 | 134 | 35 | 155 | 7.89e-11 | 61.2 |
| MS.gene59930.t1 | AT1G04380 | 28.148 | 135 | 87 | 3 | 38 | 172 | 44 | 168 | 9.25e-11 | 60.5 |
Find 47 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCAACCCACCTTCTTTC+AGG | 0.174684 | 8.2:-71688695 | MS.gene59930:intron |
| GCACATGCATGTCAAAATTA+TGG | 0.232786 | 8.2:-71689335 | MS.gene59930:CDS |
| ATGAATACTACAACAAATTC+TGG | 0.275217 | 8.2:-71687576 | MS.gene59930:CDS |
| GAAAGTCTAGTTGTCTTTAA+TGG | 0.283274 | 8.2:+71688813 | None:intergenic |
| AATTTGAAGGGACATGATTA+AGG | 0.284326 | 8.2:+71689480 | None:intergenic |
| GACATGCATGTGCAATCTTT+TGG | 0.333511 | 8.2:+71689345 | None:intergenic |
| AGACCGAGAAAGTTTCAAAT+TGG | 0.357191 | 8.2:-71688773 | MS.gene59930:CDS |
| ATCCCTACCATTGATCTTCA+AGG | 0.375888 | 8.2:-71689398 | MS.gene59930:CDS |
| ATGTTATTTATAACCTCCTC+TGG | 0.376503 | 8.2:+71688903 | None:intergenic |
| TCTCCAATTTGAAACTTTCT+CGG | 0.381665 | 8.2:+71688770 | None:intergenic |
| TCAAATTTCATTAGACCCAT+TGG | 0.418848 | 8.2:-71689464 | MS.gene59930:CDS |
| ATTTGAAGGGACATGATTAA+GGG | 0.441945 | 8.2:+71689481 | None:intergenic |
| GTGAATTGAAGTTGAAGATC+TGG | 0.443492 | 8.2:+71689434 | None:intergenic |
| TCTATGAGTTGAGTTGCATC+TGG | 0.448263 | 8.2:+71687637 | None:intergenic |
| TACAACAAATTCTGGAATAG+AGG | 0.452603 | 8.2:-71687568 | MS.gene59930:CDS |
| CTGAAAGAAGGTGGGTTGGC+AGG | 0.457585 | 8.2:+71688696 | None:intergenic |
| ATGGGTCTAATGAAATTTGA+AGG | 0.463124 | 8.2:+71689467 | None:intergenic |
| AACCTGTGTGGACATGTTCA+AGG | 0.478953 | 8.2:-71687533 | MS.gene59930:CDS |
| TTGAAGATTATGTTCATGAA+TGG | 0.482362 | 8.2:-71688719 | MS.gene59930:CDS |
| CTGAACGATTTGATGCATCA+AGG | 0.492517 | 8.2:+71689375 | None:intergenic |
| AAGATCTGGACGATCACCAA+TGG | 0.532251 | 8.2:+71689448 | None:intergenic |
| TGAAGGGACATGATTAAGGG+TGG | 0.539972 | 8.2:+71689484 | None:intergenic |
| ATCAAGGCCTTGAAGATCAA+TGG | 0.540205 | 8.2:+71689391 | None:intergenic |
| TGGTTAATAGTGAGAAAGAG+AGG | 0.549798 | 8.2:-71687690 | MS.gene59930:CDS |
| CATGATTAAGGGTGGAAACA+AGG | 0.560953 | 8.2:+71689492 | None:intergenic |
| AGATCTGGACGATCACCAAT+GGG | 0.565354 | 8.2:+71689449 | None:intergenic |
| GGTCTTCACATTGAAACTAG+TGG | 0.574098 | 8.2:+71688791 | None:intergenic |
| AGGCCTTGAAGATCAATGGT+AGG | 0.575623 | 8.2:+71689395 | None:intergenic |
| TATGGCCACAATGAAGCCAT+TGG | 0.577357 | 8.2:-71689522 | None:intergenic |
| AGTTGAGTTGCATCTGGTGA+TGG | 0.578212 | 8.2:+71687643 | None:intergenic |
| GGCCTTGAAGATCAATGGTA+GGG | 0.578631 | 8.2:+71689396 | None:intergenic |
| ATGGTAGGGATAGAATCTGT+GGG | 0.581801 | 8.2:+71689410 | None:intergenic |
| GAGTGTGCTGCATCGAGCAT+TGG | 0.582659 | 8.2:-71687710 | MS.gene59930:CDS |
| GTACCTGAAAGAAGGTGGGT+TGG | 0.586591 | 8.2:+71688692 | None:intergenic |
| GAAACAAGGTCGGTTACCAA+TGG | 0.597873 | 8.2:+71689506 | None:intergenic |
| TGGGTCTAATGAAATTTGAA+GGG | 0.604544 | 8.2:+71689468 | None:intergenic |
| AATGGTAGGGATAGAATCTG+TGG | 0.616018 | 8.2:+71689409 | None:intergenic |
| TCATGAACATAATCTTCAAG+AGG | 0.623180 | 8.2:+71688723 | None:intergenic |
| AACCTTGAACATGTCCACAC+AGG | 0.626453 | 8.2:+71687531 | None:intergenic |
| ATTAAGGGTGGAAACAAGGT+CGG | 0.632454 | 8.2:+71689496 | None:intergenic |
| TGGACAGTAGAACGTTGGAA+TGG | 0.641192 | 8.2:+71687663 | None:intergenic |
| GGTGATGGACAGTAGAACGT+TGG | 0.656999 | 8.2:+71687658 | None:intergenic |
| TGTGAATCATGGAGTTCCAG+AGG | 0.659619 | 8.2:-71688919 | MS.gene59930:CDS |
| GAATCATGGAGTTCCAGAGG+AGG | 0.684834 | 8.2:-71688916 | MS.gene59930:CDS |
| TGGTAGGGATAGAATCTGTG+GGG | 0.714886 | 8.2:+71689411 | None:intergenic |
| GGTAGGGATAGAATCTGTGG+GGG | 0.730114 | 8.2:+71689412 | None:intergenic |
| ACTTTCGAAAGAAACCTGTG+TGG | 0.772070 | 8.2:-71687545 | MS.gene59930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATATTAAATTTAACAT+CGG | - | chr8.2:71689128-71689147 | MS.gene59930:intron | 10.0% |
| !! | AATCGAAAATAATATATTTC+CGG | - | chr8.2:71688474-71688493 | MS.gene59930:intron | 15.0% |
| !! | TTAATAAAATAAACAACAAG+TGG | + | chr8.2:71687903-71687922 | None:intergenic | 15.0% |
| !!! | GGATTTTGTTTTTTTATTAT+AGG | + | chr8.2:71689215-71689234 | None:intergenic | 15.0% |
| !! | ACAATGAAAAGATTATCATA+AGG | + | chr8.2:71688571-71688590 | None:intergenic | 20.0% |
| !! | CATAAAAAACCTATATTTCA+CGG | + | chr8.2:71688453-71688472 | None:intergenic | 20.0% |
| !! | TATTAAATTTAACATCGGAA+CGG | - | chr8.2:71689133-71689152 | MS.gene59930:intron | 20.0% |
| !! | TGAATAAATTATAAGAACTC+AGG | + | chr8.2:71689236-71689255 | None:intergenic | 20.0% |
| !! | TTGTAAACATTTCATATGTT+GGG | + | chr8.2:71687850-71687869 | None:intergenic | 20.0% |
| !!! | AATTTGAAATTAAACTGATG+TGG | + | chr8.2:71687992-71688011 | None:intergenic | 20.0% |
| !!! | ATTATAGGTCTTGTAATATA+CGG | + | chr8.2:71689200-71689219 | None:intergenic | 20.0% |
| !!! | TATCATAAGGATTTAAGTTA+TGG | + | chr8.2:71688558-71688577 | None:intergenic | 20.0% |
| !!! | TTTTCCTTGTAAGAATAATT+TGG | + | chr8.2:71689106-71689125 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGATTGTGAATCA+TGG | - | chr8.2:71688110-71688129 | MS.gene59930:intron | 20.0% |
| ! | AATACCTTCATAGTCAATAT+TGG | - | chr8.2:71688887-71688906 | MS.gene59930:CDS | 25.0% |
| ! | AGTATAGATTGTATAAATGC+CGG | + | chr8.2:71688496-71688515 | None:intergenic | 25.0% |
| ! | ATGAATACTACAACAAATTC+TGG | - | chr8.2:71689464-71689483 | MS.gene59930:CDS | 25.0% |
| ! | GAATCCAAATTATTCTTACA+AGG | - | chr8.2:71689099-71689118 | MS.gene59930:intron | 25.0% |
| ! | GTTGTAAACATTTCATATGT+TGG | + | chr8.2:71687851-71687870 | None:intergenic | 25.0% |
| ! | TGTAAACATTTCATATGTTG+GGG | + | chr8.2:71687849-71687868 | None:intergenic | 25.0% |
| ! | TTGAAGATTATGTTCATGAA+TGG | - | chr8.2:71688321-71688340 | MS.gene59930:intron | 25.0% |
| !! | AACAAAATGGTAATGACATT+TGG | + | chr8.2:71688800-71688819 | None:intergenic | 25.0% |
| !! | AATATCAGAAAGTTTAGGTT+TGG | - | chr8.2:71688661-71688680 | MS.gene59930:intron | 25.0% |
| !! | ACAAAATGGTAATGACATTT+GGG | + | chr8.2:71688799-71688818 | None:intergenic | 25.0% |
| !! | CATTTTGTTGCAAAATAATG+TGG | - | chr8.2:71688811-71688830 | MS.gene59930:CDS | 25.0% |
| !! | TTTTTCATTCTTTCACTTTC+TGG | + | chr8.2:71688194-71688213 | None:intergenic | 25.0% |
| !!! | ATATTGACTATGAAGGTATT+AGG | + | chr8.2:71688887-71688906 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTACCTGAAAGA+AGG | + | chr8.2:71688359-71688378 | None:intergenic | 25.0% |
| !!! | CACATTATTTTGCAACAAAA+TGG | + | chr8.2:71688813-71688832 | None:intergenic | 25.0% |
| !!! | TTCATTGTGTTTTATTAGAG+AGG | - | chr8.2:71688583-71688602 | MS.gene59930:intron | 25.0% |
| AATTTGAAGGGACATGATTA+AGG | + | chr8.2:71687563-71687582 | None:intergenic | 30.0% | |
| ATGGGTCTAATGAAATTTGA+AGG | + | chr8.2:71687576-71687595 | None:intergenic | 30.0% | |
| ATTTGAAGGGACATGATTAA+GGG | + | chr8.2:71687562-71687581 | None:intergenic | 30.0% | |
| CAATTAGATCCGTGAAATAT+AGG | - | chr8.2:71688441-71688460 | MS.gene59930:intron | 30.0% | |
| GAAAGTCTAGTTGTCTTTAA+TGG | + | chr8.2:71688230-71688249 | None:intergenic | 30.0% | |
| TCAAATTTCATTAGACCCAT+TGG | - | chr8.2:71687576-71687595 | MS.gene59930:CDS | 30.0% | |
| TCATGAACATAATCTTCAAG+AGG | + | chr8.2:71688320-71688339 | None:intergenic | 30.0% | |
| TGGGTCTAATGAAATTTGAA+GGG | + | chr8.2:71687575-71687594 | None:intergenic | 30.0% | |
| TTGACTGAAATACCTGAATT+TGG | + | chr8.2:71688916-71688935 | None:intergenic | 30.0% | |
| ! | AGAAAGTTTAGGTTTGGAAA+AGG | - | chr8.2:71688667-71688686 | MS.gene59930:intron | 30.0% |
| ! | ATGTTATTTATAACCTCCTC+TGG | + | chr8.2:71688140-71688159 | None:intergenic | 30.0% |
| ! | TCTCCAATTTGAAACTTTCT+CGG | + | chr8.2:71688273-71688292 | None:intergenic | 30.0% |
| ! | TGTTGATGTGGATTTGAAAT+AGG | - | chr8.2:71689285-71689304 | MS.gene59930:intron | 30.0% |
| ! | TTTAAGTTATGGTCGAAATG+TGG | + | chr8.2:71688547-71688566 | None:intergenic | 30.0% |
| !! | TACAACAAATTCTGGAATAG+AGG | - | chr8.2:71689472-71689491 | MS.gene59930:CDS | 30.0% |
| AAGTCCTTAAGGATGGTAAA+TGG | - | chr8.2:71688843-71688862 | MS.gene59930:CDS | 35.0% | |
| AATTTAACATCGGAACGGAA+AGG | - | chr8.2:71689138-71689157 | MS.gene59930:intron | 35.0% | |
| ACATGAACGTTACAGTTTAC+AGG | + | chr8.2:71689006-71689025 | None:intergenic | 35.0% | |
| AGACCGAGAAAGTTTCAAAT+TGG | - | chr8.2:71688267-71688286 | MS.gene59930:intron | 35.0% | |
| AGTATAGCAGACAATTGAGA+AGG | - | chr8.2:71688615-71688634 | MS.gene59930:intron | 35.0% | |
| AGTCCTTAAGGATGGTAAAT+GGG | - | chr8.2:71688844-71688863 | MS.gene59930:CDS | 35.0% | |
| CATGAACGTTACAGTTTACA+GGG | + | chr8.2:71689005-71689024 | None:intergenic | 35.0% | |
| GAAAGTTGAAAATTGCGAGT+TGG | - | chr8.2:71687815-71687834 | MS.gene59930:intron | 35.0% | |
| GAGGCAATATCAGAAAGTTT+AGG | - | chr8.2:71688656-71688675 | MS.gene59930:intron | 35.0% | |
| GATTACATAAACAACGCACT+TGG | - | chr8.2:71688689-71688708 | MS.gene59930:intron | 35.0% | |
| GCACATGCATGTCAAAATTA+TGG | - | chr8.2:71687705-71687724 | MS.gene59930:CDS | 35.0% | |
| GTGAATTGAAGTTGAAGATC+TGG | + | chr8.2:71687609-71687628 | None:intergenic | 35.0% | |
| TAGCCTAGCGTAAAATTCAT+AGG | - | chr8.2:71687782-71687801 | MS.gene59930:intron | 35.0% | |
| TATATGCATGCATGTTGATG+TGG | - | chr8.2:71689273-71689292 | MS.gene59930:intron | 35.0% | |
| TATTGCACCATGAAGTTGTA+GGG | - | chr8.2:71688032-71688051 | MS.gene59930:intron | 35.0% | |
| TGGTTAATAGTGAGAAAGAG+AGG | - | chr8.2:71689350-71689369 | MS.gene59930:CDS | 35.0% | |
| TTACCCATTTACCATCCTTA+AGG | + | chr8.2:71688850-71688869 | None:intergenic | 35.0% | |
| TTATTGCACCATGAAGTTGT+AGG | - | chr8.2:71688031-71688050 | MS.gene59930:intron | 35.0% | |
| TTGTTGCAAAATAATGTGGC+TGG | - | chr8.2:71688815-71688834 | MS.gene59930:CDS | 35.0% | |
| ! | ATGCCTATGAATTTTACGCT+AGG | + | chr8.2:71687788-71687807 | None:intergenic | 35.0% |
| ! | CAATATTGGTGACCAAATTC+AGG | - | chr8.2:71688901-71688920 | MS.gene59930:CDS | 35.0% |
| ! | GTCACCAATATTGACTATGA+AGG | + | chr8.2:71688894-71688913 | None:intergenic | 35.0% |
| ! | TTTTGTACCTGAAAGAAGGT+GGG | + | chr8.2:71688355-71688374 | None:intergenic | 35.0% |
| ! | TTTTTGTACCTGAAAGAAGG+TGG | + | chr8.2:71688356-71688375 | None:intergenic | 35.0% |
| !! | AACGGAAAGGTACTAATTTG+TGG | - | chr8.2:71689151-71689170 | MS.gene59930:intron | 35.0% |
| !! | ACGGAAAGGTACTAATTTGT+GGG | - | chr8.2:71689152-71689171 | MS.gene59930:intron | 35.0% |
| !! | ACTATGAAGGTATTAGGAAC+GGG | + | chr8.2:71688881-71688900 | None:intergenic | 35.0% |
| !! | GACTATGAAGGTATTAGGAA+CGG | + | chr8.2:71688882-71688901 | None:intergenic | 35.0% |
| AACGTTACAGTTTACAGGGA+CGG | + | chr8.2:71689001-71689020 | None:intergenic | 40.0% | |
| AATGGTAGGGATAGAATCTG+TGG | + | chr8.2:71687634-71687653 | None:intergenic | 40.0% | |
| ACTTTCGAAAGAAACCTGTG+TGG | - | chr8.2:71689495-71689514 | MS.gene59930:CDS | 40.0% | |
| ATCAAGGCCTTGAAGATCAA+TGG | + | chr8.2:71687652-71687671 | None:intergenic | 40.0% | |
| ATCCCTACCATTGATCTTCA+AGG | - | chr8.2:71687642-71687661 | MS.gene59930:CDS | 40.0% | |
| ATGGTAGGGATAGAATCTGT+GGG | + | chr8.2:71687633-71687652 | None:intergenic | 40.0% | |
| ATTAAGGGTGGAAACAAGGT+CGG | + | chr8.2:71687547-71687566 | None:intergenic | 40.0% | |
| ATTGCACCATGAAGTTGTAG+GGG | - | chr8.2:71688033-71688052 | MS.gene59930:intron | 40.0% | |
| CATGATTAAGGGTGGAAACA+AGG | + | chr8.2:71687551-71687570 | None:intergenic | 40.0% | |
| CTGAACGATTTGATGCATCA+AGG | + | chr8.2:71687668-71687687 | None:intergenic | 40.0% | |
| GGTCTTCACATTGAAACTAG+TGG | + | chr8.2:71688252-71688271 | None:intergenic | 40.0% | |
| TGTCAGCTGAGTCATGTTTA+CGG | - | chr8.2:71689023-71689042 | MS.gene59930:intron | 40.0% | |
| TTAGATCCCCTACAACTTCA+TGG | + | chr8.2:71688042-71688061 | None:intergenic | 40.0% | |
| ! | GACATGCATGTGCAATCTTT+TGG | + | chr8.2:71687698-71687717 | None:intergenic | 40.0% |
| ! | TCTATGAGTTGAGTTGCATC+TGG | + | chr8.2:71689406-71689425 | None:intergenic | 40.0% |
| !! | CTATGAAGGTATTAGGAACG+GGG | + | chr8.2:71688880-71688899 | None:intergenic | 40.0% |
| AACCTGTGTGGACATGTTCA+AGG | - | chr8.2:71689507-71689526 | MS.gene59930:CDS | 45.0% | |
| AACCTTGAACATGTCCACAC+AGG | + | chr8.2:71689512-71689531 | None:intergenic | 45.0% | |
| AAGATCTGGACGATCACCAA+TGG | + | chr8.2:71687595-71687614 | None:intergenic | 45.0% | |
| AGATCTGGACGATCACCAAT+GGG | + | chr8.2:71687594-71687613 | None:intergenic | 45.0% | |
| AGGCCTTGAAGATCAATGGT+AGG | + | chr8.2:71687648-71687667 | None:intergenic | 45.0% | |
| CCTGAACCAGACCTAACATA+TGG | - | chr8.2:71688755-71688774 | MS.gene59930:CDS | 45.0% | |
| GAAACAAGGTCGGTTACCAA+TGG | + | chr8.2:71687537-71687556 | None:intergenic | 45.0% | |
| GAGCTGGCAAACCATATGTT+AGG | + | chr8.2:71688769-71688788 | None:intergenic | 45.0% | |
| GGCAAACCATATGTTAGGTC+TGG | + | chr8.2:71688764-71688783 | None:intergenic | 45.0% | |
| GGCCTTGAAGATCAATGGTA+GGG | + | chr8.2:71687647-71687666 | None:intergenic | 45.0% | |
| GGTTTGCAAGTCCTTAAGGA+TGG | - | chr8.2:71688836-71688855 | MS.gene59930:CDS | 45.0% | |
| TGAAGGGACATGATTAAGGG+TGG | + | chr8.2:71687559-71687578 | None:intergenic | 45.0% | |
| TGGACAGTAGAACGTTGGAA+TGG | + | chr8.2:71689380-71689399 | None:intergenic | 45.0% | |
| TGGTAGGGATAGAATCTGTG+GGG | + | chr8.2:71687632-71687651 | None:intergenic | 45.0% | |
| TGTGAATCATGGAGTTCCAG+AGG | - | chr8.2:71688121-71688140 | MS.gene59930:intron | 45.0% | |
| ! | AGTTGAGTTGCATCTGGTGA+TGG | + | chr8.2:71689400-71689419 | None:intergenic | 45.0% |
| ! | CCATATGTTAGGTCTGGTTC+AGG | + | chr8.2:71688758-71688777 | None:intergenic | 45.0% |
| ! | GCTAGCATTGAGATTGCTTG+AGG | - | chr8.2:71688637-71688656 | MS.gene59930:intron | 45.0% |
| ! | TTAGGTCTGGTTCAGGACAT+GGG | + | chr8.2:71688751-71688770 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTCTTTTAAAAT+AGG | - | chr8.2:71688956-71688975 | MS.gene59930:intron | 5.0% |
| AACAACGCACTTGGCAAGCA+TGG | - | chr8.2:71688698-71688717 | MS.gene59930:CDS | 50.0% | |
| ACAACGCACTTGGCAAGCAT+GGG | - | chr8.2:71688699-71688718 | MS.gene59930:CDS | 50.0% | |
| ACATTTGGGTCAGCATGAGC+TGG | + | chr8.2:71688785-71688804 | None:intergenic | 50.0% | |
| GAATCATGGAGTTCCAGAGG+AGG | - | chr8.2:71688124-71688143 | MS.gene59930:intron | 50.0% | |
| GGGACGGCGTTCAATGAATA+TGG | + | chr8.2:71688985-71689004 | None:intergenic | 50.0% | |
| GGTAGGGATAGAATCTGTGG+GGG | + | chr8.2:71687631-71687650 | None:intergenic | 50.0% | |
| GTACCTGAAAGAAGGTGGGT+TGG | + | chr8.2:71688351-71688370 | None:intergenic | 50.0% | |
| ! | GTTAGGTCTGGTTCAGGACA+TGG | + | chr8.2:71688752-71688771 | None:intergenic | 50.0% |
| ! | TAGGTCTGGTTCAGGACATG+GGG | + | chr8.2:71688750-71688769 | None:intergenic | 50.0% |
| !! | GGCTGGTTTGCAAGTCCTTA+AGG | - | chr8.2:71688832-71688851 | MS.gene59930:CDS | 50.0% |
| !! | GGTGATGGACAGTAGAACGT+TGG | + | chr8.2:71689385-71689404 | None:intergenic | 50.0% |
| CTGCCAACCCACCTTCTTTC+AGG | - | chr8.2:71688345-71688364 | MS.gene59930:intron | 55.0% | |
| GAGTGTGCTGCATCGAGCAT+TGG | - | chr8.2:71689330-71689349 | MS.gene59930:CDS | 55.0% | |
| TGGCAAGCATGGGCAACACA+TGG | - | chr8.2:71688709-71688728 | MS.gene59930:CDS | 55.0% | |
| ! | AGGTCTGGTTCAGGACATGG+GGG | + | chr8.2:71688749-71688768 | None:intergenic | 55.0% |
| !! | CTGAAAGAAGGTGGGTTGGC+AGG | + | chr8.2:71688347-71688366 | None:intergenic | 55.0% |
| ! | GGTCTGGTTCAGGACATGGG+GGG | + | chr8.2:71688748-71688767 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 71687528 | 71689534 | 71687528 | ID=MS.gene59930 |
| chr8.2 | mRNA | 71687528 | 71689534 | 71687528 | ID=MS.gene59930.t1;Parent=MS.gene59930 |
| chr8.2 | exon | 71689325 | 71689534 | 71689325 | ID=MS.gene59930.t1.exon1;Parent=MS.gene59930.t1 |
| chr8.2 | CDS | 71689325 | 71689534 | 71689325 | ID=cds.MS.gene59930.t1;Parent=MS.gene59930.t1 |
| chr8.2 | exon | 71688696 | 71688943 | 71688696 | ID=MS.gene59930.t1.exon2;Parent=MS.gene59930.t1 |
| chr8.2 | CDS | 71688696 | 71688943 | 71688696 | ID=cds.MS.gene59930.t1;Parent=MS.gene59930.t1 |
| chr8.2 | exon | 71687528 | 71687738 | 71687528 | ID=MS.gene59930.t1.exon3;Parent=MS.gene59930.t1 |
| chr8.2 | CDS | 71687528 | 71687738 | 71687528 | ID=cds.MS.gene59930.t1;Parent=MS.gene59930.t1 |
| Gene Sequence |
| Protein sequence |
