AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68181


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68181.t1 MTR_3g117420 95.480 354 15 1 5 358 2 354 0.0 700
MS.gene68181.t1 MTR_8g074050 76.420 352 82 1 7 358 4 354 0.0 574
MS.gene68181.t1 MTR_8g074070 75.852 352 84 1 7 358 4 354 0.0 564
MS.gene68181.t1 MTR_8g074070 72.159 352 78 2 7 358 4 335 0.0 528
MS.gene68181.t1 MTR_3g117485 67.908 349 104 5 14 358 9 353 2.47e-167 471
MS.gene68181.t1 MTR_3g117485 68.705 278 83 3 83 358 6 281 2.78e-138 394
MS.gene68181.t1 MTR_4g116010 50.725 345 157 4 16 358 15 348 2.26e-121 354
MS.gene68181.t1 MTR_4g115990 46.624 311 139 4 40 350 36 319 2.44e-91 276
MS.gene68181.t1 MTR_3g026150 41.441 333 188 4 13 343 19 346 2.27e-86 265
MS.gene68181.t1 MTR_2g437380 39.776 357 202 7 8 358 7 356 2.80e-80 249
MS.gene68181.t1 MTR_5g055900 38.372 344 203 4 17 358 12 348 9.51e-80 248
MS.gene68181.t1 MTR_2g072910 39.244 344 202 3 17 358 16 354 1.14e-78 245
MS.gene68181.t1 MTR_5g055680 40.523 306 177 3 55 358 46 348 1.54e-77 242
MS.gene68181.t1 MTR_7g062580 40.129 309 175 5 30 336 32 332 1.56e-77 243
MS.gene68181.t1 MTR_5g048470 38.889 306 183 3 55 358 52 355 2.55e-77 242
MS.gene68181.t1 MTR_5g048570 36.337 344 208 4 17 358 12 346 2.59e-77 241
MS.gene68181.t1 MTR_2g072890 38.438 333 193 5 17 346 16 339 9.58e-77 240
MS.gene68181.t1 MTR_5g055820 39.016 305 182 2 56 358 47 349 1.53e-76 240
MS.gene68181.t1 MTR_8g064200 38.926 298 178 3 55 350 51 346 9.38e-76 238
MS.gene68181.t1 MTR_8g064200 38.235 306 185 3 55 358 56 359 1.15e-75 238
MS.gene68181.t1 MTR_0009s0050 36.812 345 207 5 17 358 12 348 3.86e-74 233
MS.gene68181.t1 MTR_0009s0050 36.812 345 207 5 17 358 12 348 4.01e-74 234
MS.gene68181.t1 MTR_7g062550 38.507 335 190 8 30 358 37 361 4.10e-74 234
MS.gene68181.t1 MTR_7g062570 38.206 301 177 4 56 355 55 347 2.23e-73 232
MS.gene68181.t1 MTR_5g048550 38.235 306 184 3 55 358 46 348 3.42e-73 231
MS.gene68181.t1 MTR_5g055690 35.211 355 220 5 7 358 2 349 1.18e-72 230
MS.gene68181.t1 MTR_5g048850 35.465 344 213 4 17 358 12 348 2.12e-72 229
MS.gene68181.t1 MTR_1g033810 39.583 288 172 2 55 342 46 331 1.15e-71 227
MS.gene68181.t1 MTR_7g062600 35.329 334 203 7 30 358 28 353 1.83e-71 227
MS.gene68181.t1 MTR_2g437380 43.726 263 144 3 99 358 1 262 1.33e-70 221
MS.gene68181.t1 MTR_7g063730 35.621 306 192 3 55 358 63 365 6.17e-70 223
MS.gene68181.t1 MTR_7g068650 37.809 283 172 2 54 332 52 334 4.06e-69 221
MS.gene68181.t1 MTR_0328s0030 36.103 349 212 5 13 358 6 346 8.18e-68 217
MS.gene68181.t1 MTR_0009s0480 34.188 351 218 5 12 358 6 347 8.42e-68 217
MS.gene68181.t1 MTR_5g048740 35.838 346 210 4 17 358 10 347 1.01e-67 217
MS.gene68181.t1 MTR_3g026150 43.019 265 146 3 17 281 23 282 1.03e-67 215
MS.gene68181.t1 MTR_7g045650 41.975 243 138 2 51 293 55 294 1.59e-67 216
MS.gene68181.t1 MTR_4g015790 36.207 290 181 2 50 335 56 345 2.84e-67 216
MS.gene68181.t1 MTR_5g082750 37.234 282 172 3 55 332 48 328 1.15e-64 209
MS.gene68181.t1 MTR_3g026150 41.841 239 136 2 107 343 6 243 1.36e-64 206
MS.gene68181.t1 MTR_3g070860 36.014 286 180 2 50 332 44 329 3.04e-64 208
MS.gene68181.t1 MTR_5g059130 33.030 330 210 6 10 336 1 322 4.04e-64 207
MS.gene68181.t1 MTR_2g072910 41.045 268 153 2 17 284 16 278 4.91e-64 205
MS.gene68181.t1 MTR_3g072820 35.473 296 180 6 52 343 38 326 6.15e-63 204
MS.gene68181.t1 MTR_5g011250 33.837 331 204 8 15 334 5 331 1.60e-61 201
MS.gene68181.t1 MTR_5g055800 34.426 305 194 4 56 358 47 347 3.14e-61 200
MS.gene68181.t1 MTR_3g092890 36.610 295 179 5 55 348 37 324 4.84e-61 199
MS.gene68181.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 2.99e-60 194
MS.gene68181.t1 MTR_0009s0050 39.113 248 148 2 113 358 4 250 3.26e-60 194
MS.gene68181.t1 MTR_5g048850 37.218 266 160 3 17 282 12 270 5.08e-58 189
MS.gene68181.t1 MTR_3g072810 34.409 279 176 5 74 348 53 328 6.63e-58 191
MS.gene68181.t1 MTR_5g055690 36.957 276 166 4 7 281 2 270 4.83e-57 187
MS.gene68181.t1 MTR_5g059140 34.520 281 174 5 54 329 40 315 2.66e-56 187
MS.gene68181.t1 MTR_3g063180 35.370 311 187 8 56 355 42 349 1.02e-55 186
MS.gene68181.t1 MTR_1g062110 33.529 340 206 9 16 346 25 353 9.89e-55 184
MS.gene68181.t1 MTR_7g062560 34.967 306 184 5 55 358 61 353 1.36e-54 183
MS.gene68181.t1 MTR_8g024120 34.237 295 188 6 56 349 42 331 1.45e-54 182
MS.gene68181.t1 MTR_6g015950 34.286 315 188 8 44 351 27 329 5.84e-53 178
MS.gene68181.t1 MTR_2g102570 34.868 304 177 9 56 349 52 344 9.72e-53 179
MS.gene68181.t1 MTR_0056s0160 37.607 234 143 2 127 358 1 233 2.88e-52 173
MS.gene68181.t1 MTR_0009s0480 34.307 274 169 4 12 283 6 270 9.47e-52 173
MS.gene68181.t1 MTR_3g058610 30.032 313 209 6 26 335 13 318 1.92e-51 175
MS.gene68181.t1 MTR_5g022020 32.099 324 209 7 22 342 9 324 1.99e-51 175
MS.gene68181.t1 MTR_2g025120 32.566 304 190 8 55 352 3 297 2.51e-51 173
MS.gene68181.t1 MTR_8g075890 33.103 290 187 6 56 342 39 324 2.55e-51 175
MS.gene68181.t1 MTR_5g032870 34.967 306 186 8 56 353 38 338 6.02e-51 173
MS.gene68181.t1 MTR_7g102820 32.581 310 186 7 50 346 61 360 2.54e-50 172
MS.gene68181.t1 MTR_4g087140 35.880 301 170 9 56 336 26 323 5.38e-50 171
MS.gene68181.t1 MTR_5g065010 34.694 294 177 8 56 341 39 325 1.28e-49 170
MS.gene68181.t1 MTR_5g032880 35.526 304 187 7 56 353 376 676 1.99e-49 176
MS.gene68181.t1 MTR_5g032880 33.333 300 186 5 56 351 38 327 2.58e-46 167
MS.gene68181.t1 MTR_8g075830 32.069 290 190 6 56 342 39 324 2.70e-48 167
MS.gene68181.t1 MTR_3g088565 31.884 276 176 3 54 325 1 268 8.48e-48 164
MS.gene68181.t1 MTR_4g087110 36.120 299 167 9 56 334 26 320 1.38e-47 164
MS.gene68181.t1 MTR_3g091350 32.667 300 188 9 56 350 59 349 2.48e-47 164
MS.gene68181.t1 MTR_1g034060 33.333 303 174 8 55 334 25 322 9.97e-47 162
MS.gene68181.t1 MTR_1g034120 33.663 303 173 8 55 334 25 322 1.30e-46 162
MS.gene68181.t1 MTR_4g087120 35.548 301 170 9 56 336 26 322 1.45e-46 162
MS.gene68181.t1 MTR_3g083370 30.464 302 197 7 55 352 3 295 3.97e-46 160
MS.gene68181.t1 MTR_1g034140 35.374 294 167 8 56 334 27 312 1.75e-45 159
MS.gene68181.t1 MTR_7g081710 29.643 280 191 5 56 333 49 324 4.75e-45 158
MS.gene68181.t1 MTR_1g070135 30.218 321 212 9 30 348 16 326 4.76e-44 155
MS.gene68181.t1 MTR_1g070085 32.808 317 193 10 45 348 17 326 5.84e-44 155
MS.gene68181.t1 MTR_1g070085 32.808 317 193 10 45 348 17 326 5.84e-44 155
MS.gene68181.t1 MTR_4g093840 30.868 311 201 7 56 358 62 366 2.85e-43 154
MS.gene68181.t1 MTR_3g091360 31.379 290 186 8 56 340 52 333 3.52e-43 153
MS.gene68181.t1 MTR_1g062110 34.182 275 167 8 16 281 25 294 6.05e-43 152
MS.gene68181.t1 MTR_1g093110 28.797 316 211 8 51 358 65 374 8.79e-43 152
MS.gene68181.t1 MTR_6g464620 29.814 322 197 7 53 355 61 372 1.18e-42 152
MS.gene68181.t1 MTR_8g033380 30.351 313 204 7 54 355 52 361 1.90e-42 152
MS.gene68181.t1 MTR_7g451860 31.068 309 188 8 48 351 33 321 2.10e-42 150
MS.gene68181.t1 MTR_7g047670 31.068 309 188 8 48 351 33 321 2.10e-42 150
MS.gene68181.t1 MTR_5g085330 30.182 275 180 6 54 325 3 268 2.15e-42 150
MS.gene68181.t1 MTR_1g102070 30.159 315 205 7 53 355 56 367 7.64e-42 150
MS.gene68181.t1 MTR_1g048940 29.907 321 194 11 55 358 44 350 9.82e-42 149
MS.gene68181.t1 MTR_7g102720 31.845 336 210 11 32 358 10 335 1.06e-41 149
MS.gene68181.t1 MTR_1g070120 29.492 295 200 7 56 348 38 326 1.18e-41 149
MS.gene68181.t1 MTR_8g041620 31.741 293 184 7 50 333 62 347 1.49e-41 149
MS.gene68181.t1 MTR_8g062600 31.959 291 184 6 51 333 62 346 2.53e-41 149
MS.gene68181.t1 MTR_2g069300 30.537 298 193 7 56 347 54 343 1.09e-40 147
MS.gene68181.t1 MTR_3g088745 31.190 311 192 8 30 328 17 317 1.43e-40 146
MS.gene68181.t1 MTR_4g087100 34.448 299 172 9 56 334 26 320 2.68e-40 145
MS.gene68181.t1 MTR_2g069060 31.132 318 201 8 39 349 32 338 2.98e-40 145
MS.gene68181.t1 MTR_8g009110 31.667 300 190 9 56 348 60 351 3.19e-40 145
MS.gene68181.t1 MTR_8g009090 30.903 288 179 7 56 333 60 337 6.96e-40 144
MS.gene68181.t1 MTR_2g068950 32.168 286 182 6 50 331 57 334 1.05e-39 144
MS.gene68181.t1 MTR_2g068840 30.794 315 198 9 56 358 55 361 1.06e-39 144
MS.gene68181.t1 MTR_2g025120 33.478 230 141 6 55 281 3 223 1.10e-39 140
MS.gene68181.t1 MTR_8g041600 30.000 320 206 8 50 358 62 374 1.44e-39 144
MS.gene68181.t1 MTR_8g009080 31.410 312 201 7 54 358 92 397 1.64e-39 144
MS.gene68181.t1 MTR_4g024660 32.950 261 167 5 50 308 61 315 1.92e-39 144
MS.gene68181.t1 MTR_2g069010 31.475 305 192 7 50 343 63 361 1.93e-39 144
MS.gene68181.t1 MTR_2g083000 30.877 285 171 9 56 333 33 298 2.27e-39 142
MS.gene68181.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 2.83e-39 143
MS.gene68181.t1 MTR_4g087090 30.976 297 182 8 56 335 30 320 2.86e-39 142
MS.gene68181.t1 MTR_0009s0050 39.645 169 99 2 192 358 1 168 3.09e-39 137
MS.gene68181.t1 MTR_8g009160 29.524 315 200 8 56 358 60 364 4.08e-39 142
MS.gene68181.t1 MTR_2g069020 32.414 290 184 7 50 333 61 344 4.31e-39 143
MS.gene68181.t1 MTR_2g069210 31.392 309 192 9 56 355 64 361 4.62e-39 142
MS.gene68181.t1 MTR_1g070080 31.894 301 193 7 53 346 29 324 4.85e-39 142
MS.gene68181.t1 MTR_7g016090 31.343 268 178 5 84 349 63 326 1.10e-38 140
MS.gene68181.t1 MTR_7g016090 31.343 268 178 5 84 349 65 328 1.26e-38 140
MS.gene68181.t1 MTR_5g005570 30.719 306 182 9 52 351 33 314 1.51e-38 140
MS.gene68181.t1 MTR_2g068960 31.615 291 180 7 54 333 61 343 1.70e-38 141
MS.gene68181.t1 MTR_3g043900 31.596 307 197 6 56 358 56 353 2.88e-38 140
MS.gene68181.t1 MTR_2g069090 33.205 259 158 5 56 308 68 317 3.17e-38 140
MS.gene68181.t1 MTR_1g093120 29.180 305 195 8 50 343 61 355 3.17e-38 140
MS.gene68181.t1 MTR_7g056347 29.283 321 203 8 52 358 63 373 3.20e-38 140
MS.gene68181.t1 MTR_8g028435 30.233 301 187 10 56 344 60 349 8.11e-38 139
MS.gene68181.t1 MTR_2g069190 31.359 287 178 7 56 333 68 344 8.66e-38 139
MS.gene68181.t1 MTR_4g087130 33.779 299 177 9 56 336 26 321 1.56e-37 138
MS.gene68181.t1 MTR_3g045230 31.169 308 198 8 56 358 56 354 1.95e-37 138
MS.gene68181.t1 MTR_6g092620 29.348 276 181 5 54 324 1 267 2.72e-37 136
MS.gene68181.t1 MTR_7g016080 32.184 261 152 6 80 332 61 304 5.26e-37 136
MS.gene68181.t1 MTR_4g117880 30.293 307 191 9 56 351 60 354 5.90e-37 137
MS.gene68181.t1 MTR_1g070085 32.937 252 163 6 99 348 1 248 7.72e-37 134
MS.gene68181.t1 MTR_8g009170 29.747 316 200 9 56 358 60 366 1.27e-36 136
MS.gene68181.t1 MTR_0009s0400 42.361 144 81 1 217 358 1 144 1.45e-36 130
MS.gene68181.t1 MTR_1g093140 28.664 307 205 8 50 349 67 366 1.78e-36 136
MS.gene68181.t1 MTR_1g043775 29.747 316 197 10 56 358 54 357 3.57e-36 134
MS.gene68181.t1 MTR_1g011580 32.841 271 163 7 56 324 63 316 4.11e-36 134
MS.gene68181.t1 MTR_8g461330 31.164 292 175 10 56 333 27 306 5.02e-36 134
MS.gene68181.t1 MTR_1g043810 30.363 303 189 9 56 348 54 344 6.91e-36 134
MS.gene68181.t1 MTR_1g081840 29.667 300 190 7 44 328 41 334 8.40e-36 134
MS.gene68181.t1 MTR_8g008930 29.412 289 183 7 56 333 60 338 9.41e-36 134
MS.gene68181.t1 MTR_8g093930 27.726 321 211 8 22 332 19 328 1.03e-35 133
MS.gene68181.t1 MTR_1g070100 32.927 246 159 6 105 348 3 244 1.04e-35 131
MS.gene68181.t1 MTR_3g096500 29.245 318 208 8 45 351 55 366 1.23e-35 134
MS.gene68181.t1 MTR_8g063070 27.273 308 209 8 50 349 61 361 1.74e-35 133
MS.gene68181.t1 MTR_2g083030 30.312 320 187 11 29 333 5 303 2.45e-35 132
MS.gene68181.t1 MTR_7g029655 30.492 305 191 11 49 342 60 354 3.36e-35 132
MS.gene68181.t1 MTR_1g070185 29.097 299 196 8 50 342 63 351 5.34e-35 132
MS.gene68181.t1 MTR_7g105070 30.345 290 189 7 50 333 53 335 2.84e-34 129
MS.gene68181.t1 MTR_3g083370 29.661 236 154 6 55 287 3 229 4.80e-34 125
MS.gene68181.t1 MTR_8g469400 30.952 294 176 8 50 335 61 335 7.08e-34 128
MS.gene68181.t1 MTR_0032s0040 28.571 294 193 9 50 335 64 348 8.20e-34 129
MS.gene68181.t1 MTR_1g043760 27.597 308 201 9 56 352 54 350 1.07e-33 128
MS.gene68181.t1 MTR_1g032250 32.333 300 190 8 56 350 73 364 1.69e-33 127
MS.gene68181.t1 MTR_3g040410 32.226 301 179 12 56 348 6 289 3.66e-33 125
MS.gene68181.t1 MTR_1g032140 30.795 302 192 9 56 350 66 357 4.29e-33 126
MS.gene68181.t1 MTR_4g074130 29.389 262 175 8 53 311 37 291 6.69e-33 125
MS.gene68181.t1 MTR_8g093980 29.154 319 207 9 50 358 53 362 1.10e-32 125
MS.gene68181.t1 MTR_8g041600 30.645 248 160 6 50 292 62 302 1.17e-32 124
MS.gene68181.t1 MTR_7g056393 30.769 312 193 8 50 349 61 361 3.50e-32 124
MS.gene68181.t1 MTR_7g056353 29.496 278 174 6 92 357 79 346 4.04e-32 126
MS.gene68181.t1 MTR_1g032220 30.333 300 196 8 56 350 73 364 6.29e-32 123
MS.gene68181.t1 MTR_2g070870 28.912 294 189 9 44 330 16 296 1.32e-31 122
MS.gene68181.t1 MTR_2g069060 31.092 238 148 6 50 281 21 248 3.16e-31 119
MS.gene68181.t1 MTR_7g078010 28.115 313 202 8 50 350 61 362 3.35e-31 121
MS.gene68181.t1 MTR_1g070135 29.921 254 167 8 30 281 16 260 6.65e-31 119
MS.gene68181.t1 MTR_4g119410 29.355 310 196 9 52 349 63 361 1.09e-30 120
MS.gene68181.t1 MTR_2g019370 28.523 298 189 10 49 333 20 306 1.19e-30 119
MS.gene68181.t1 MTR_4g011690 30.392 306 193 12 56 351 9 304 1.85e-30 118
MS.gene68181.t1 MTR_8g006930 28.438 320 211 9 50 358 61 373 4.73e-30 118
MS.gene68181.t1 MTR_1g043770 28.897 263 170 6 52 308 49 300 5.45e-30 118
MS.gene68181.t1 MTR_8g009080 31.441 229 149 5 54 280 92 314 9.25e-30 117
MS.gene68181.t1 MTR_8g009080 31.858 226 146 5 54 277 92 311 2.00e-29 116
MS.gene68181.t1 MTR_1g043775 31.034 232 142 7 56 280 54 274 5.39e-29 114
MS.gene68181.t1 MTR_4g132770 40.517 116 69 0 209 324 21 136 1.71e-28 108
MS.gene68181.t1 MTR_1g043810 31.034 232 142 7 56 280 54 274 1.04e-27 111
MS.gene68181.t1 MTR_3g108520 30.195 308 193 13 52 344 3 303 2.31e-27 110
MS.gene68181.t1 MTR_4g123020 28.669 293 178 9 56 334 20 295 3.69e-27 109
MS.gene68181.t1 MTR_8g009120 27.331 311 201 8 56 358 60 353 3.82e-27 110
MS.gene68181.t1 MTR_2g072930 37.748 151 90 1 17 167 16 162 4.74e-27 105
MS.gene68181.t1 MTR_8g009170 29.310 232 148 6 56 280 60 282 1.35e-26 107
MS.gene68181.t1 MTR_3g117430 52.294 109 15 2 250 358 58 129 1.57e-26 102
MS.gene68181.t1 MTR_3g117430 60.000 70 11 1 105 174 5 57 3.67e-19 82.8
MS.gene68181.t1 MTR_4g021360 28.667 300 204 9 53 345 4 300 2.66e-26 107
MS.gene68181.t1 MTR_1g027290 28.939 311 184 12 52 344 25 316 3.57e-26 107
MS.gene68181.t1 MTR_6g088665 30.195 308 183 12 57 335 11 315 4.38e-26 107
MS.gene68181.t1 MTR_8g030880 29.514 288 183 10 56 334 10 286 9.76e-26 105
MS.gene68181.t1 MTR_6g088665 30.097 309 183 12 57 335 11 316 1.04e-25 106
MS.gene68181.t1 MTR_8g009150 25.641 312 197 8 56 358 60 345 1.86e-25 105
MS.gene68181.t1 MTR_3g464530 28.571 266 163 6 56 311 34 282 4.10e-25 104
MS.gene68181.t1 MTR_4g011720 28.754 313 204 12 48 351 1 303 5.75e-25 103
MS.gene68181.t1 MTR_7g078010 29.960 247 155 7 50 288 61 297 5.22e-24 100
MS.gene68181.t1 MTR_1g043770 27.778 234 154 5 52 280 49 272 8.77e-24 100
MS.gene68181.t1 MTR_4g100600 28.000 325 210 13 48 356 1 317 8.88e-24 100
MS.gene68181.t1 MTR_7g090520 27.273 308 196 11 56 350 10 302 1.88e-23 99.4
MS.gene68181.t1 MTR_4g021380 27.885 312 210 9 51 351 2 309 2.81e-23 99.0
MS.gene68181.t1 MTR_2g068800 27.778 252 149 8 56 299 55 281 7.04e-23 97.1
MS.gene68181.t1 MTR_1g027310 27.431 288 158 8 52 332 45 288 1.44e-22 97.1
MS.gene68181.t1 MTR_7g077670 27.974 311 201 12 50 351 5 301 2.11e-22 96.7
MS.gene68181.t1 MTR_1g070110 29.237 236 131 6 99 331 4 206 3.43e-22 94.4
MS.gene68181.t1 MTR_2g033270 29.630 270 160 10 80 334 38 292 1.61e-21 94.0
MS.gene68181.t1 MTR_4g096840 25.769 260 178 10 79 328 45 299 2.98e-21 93.6
MS.gene68181.t1 MTR_8g009180 30.220 182 120 4 166 342 99 278 8.26e-21 91.7
MS.gene68181.t1 MTR_4g100590 27.152 302 197 11 48 337 1 291 1.05e-20 91.7
MS.gene68181.t1 MTR_1g086550 25.503 298 193 9 56 334 20 307 1.80e-20 91.7
MS.gene68181.t1 MTR_8g102600 28.082 292 186 11 77 348 29 316 9.97e-20 89.0
MS.gene68181.t1 MTR_3g464530 28.390 236 142 6 56 281 34 252 2.76e-19 86.7
MS.gene68181.t1 MTR_5g025090 27.208 283 186 6 56 334 5 271 3.74e-19 87.0
MS.gene68181.t1 MTR_5g027230 27.402 281 188 5 56 334 6 272 6.07e-19 86.7
MS.gene68181.t1 MTR_4g094900 29.661 236 140 8 56 267 8 241 6.99e-19 85.5
MS.gene68181.t1 MTR_0009s0410 31.288 163 102 3 11 171 5 159 7.62e-19 83.2
MS.gene68181.t1 MTR_1g043840 31.847 157 97 5 153 308 37 184 2.42e-16 79.3
MS.gene68181.t1 MTR_5g025060 25.704 284 172 6 52 334 2 247 5.22e-16 77.8
MS.gene68181.t1 MTR_4g100590 29.084 251 159 10 99 337 1 244 8.32e-16 77.0
MS.gene68181.t1 MTR_8g102600 27.778 270 171 11 99 348 1 266 2.02e-15 75.9
MS.gene68181.t1 MTR_1g011600 28.249 177 122 4 162 335 121 295 6.73e-15 74.7
MS.gene68181.t1 MTR_6g035160 33.088 136 86 4 217 348 35 169 8.20e-15 72.4
MS.gene68181.t1 MTR_5g024940 26.502 283 169 7 56 334 6 253 9.68e-15 73.9
MS.gene68181.t1 MTR_1g032240 34.211 114 64 3 204 316 48 151 3.20e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68181.t1 AT5G20400 55.233 344 151 3 16 358 7 348 3.68e-136 392
MS.gene68181.t1 AT1G49390 53.488 344 157 3 16 358 7 348 3.93e-135 389
MS.gene68181.t1 AT5G20550 57.980 307 127 2 54 358 43 349 8.29e-132 380
MS.gene68181.t1 AT5G54000 51.297 347 161 5 16 358 7 349 1.51e-126 367
MS.gene68181.t1 AT1G49390 57.993 269 113 0 90 358 1 269 1.67e-119 346
MS.gene68181.t1 AT5G54000 54.647 269 122 0 90 358 1 269 1.58e-111 326
MS.gene68181.t1 AT3G21420 43.966 348 186 6 18 358 17 362 2.38e-87 268
MS.gene68181.t1 AT1G17020 36.288 361 221 5 3 358 2 358 7.40e-78 243
MS.gene68181.t1 AT4G25300 39.677 310 177 3 55 358 51 356 3.50e-76 239
MS.gene68181.t1 AT1G78550 40.000 305 180 2 56 358 53 356 3.30e-75 236
MS.gene68181.t1 AT2G38240 36.232 345 207 5 17 355 11 348 1.09e-74 235
MS.gene68181.t1 AT1G17010 36.311 347 212 4 17 358 16 358 2.01e-73 232
MS.gene68181.t1 AT4G25310 40.323 310 172 4 55 358 51 353 3.55e-72 228
MS.gene68181.t1 AT5G05600 36.688 308 186 4 55 355 61 366 7.70e-69 221
MS.gene68181.t1 AT1G78550 39.286 280 165 3 81 358 2 278 1.35e-65 209
MS.gene68181.t1 AT3G11180 37.370 289 176 3 49 335 88 373 1.63e-64 210
MS.gene68181.t1 AT3G11180 37.370 289 176 3 49 335 88 373 1.64e-64 210
MS.gene68181.t1 AT3G55970 35.762 302 186 5 56 351 52 351 9.12e-63 204
MS.gene68181.t1 AT5G08640 36.396 283 170 5 56 334 43 319 2.37e-60 197
MS.gene68181.t1 AT5G08640 36.396 283 170 5 56 334 43 319 2.37e-60 197
MS.gene68181.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.74e-59 196
MS.gene68181.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.74e-59 196
MS.gene68181.t1 AT4G22880 34.146 287 181 5 55 334 46 331 1.74e-59 196
MS.gene68181.t1 AT4G16330 36.156 307 177 8 56 355 67 361 9.38e-58 191
MS.gene68181.t1 AT4G10500 35.495 293 179 8 56 343 44 331 7.94e-56 186
MS.gene68181.t1 AT2G36690 33.828 337 209 8 16 348 19 345 9.94e-56 186
MS.gene68181.t1 AT2G36690 33.828 337 209 8 16 348 19 345 9.94e-56 186
MS.gene68181.t1 AT3G19010 37.377 305 171 9 47 336 20 319 1.11e-54 183
MS.gene68181.t1 AT3G19010 37.377 305 171 9 47 336 20 319 1.11e-54 183
MS.gene68181.t1 AT5G24530 33.634 333 187 9 37 348 4 323 5.77e-54 181
MS.gene68181.t1 AT5G05600 36.522 230 143 2 55 281 61 290 1.10e-52 176
MS.gene68181.t1 AT4G25310 36.275 306 162 5 55 358 51 325 2.66e-52 176
MS.gene68181.t1 AT3G60290 35.135 296 178 7 44 332 38 326 2.66e-52 177
MS.gene68181.t1 AT2G44800 35.125 279 169 6 52 325 48 319 4.65e-51 174
MS.gene68181.t1 AT1G55290 34.713 314 188 9 52 358 58 361 3.01e-50 172
MS.gene68181.t1 AT4G16330 36.782 261 152 7 102 355 1 255 2.41e-49 166
MS.gene68181.t1 AT1G62380 31.148 305 198 6 51 352 2 297 3.53e-49 168
MS.gene68181.t1 AT3G13610 34.069 317 190 10 50 358 56 361 4.06e-49 169
MS.gene68181.t1 AT4G10490 33.333 297 184 9 56 348 42 328 7.20e-49 168
MS.gene68181.t1 AT1G12010 31.511 311 200 7 51 357 2 303 1.14e-48 167
MS.gene68181.t1 AT5G07200 34.035 285 176 5 54 328 56 338 5.00e-48 167
MS.gene68181.t1 AT1G15550 33.333 312 192 7 30 335 31 332 7.50e-48 166
MS.gene68181.t1 AT5G63590 32.660 297 180 7 52 336 10 298 9.07e-48 164
MS.gene68181.t1 AT3G55970 34.632 231 146 3 56 281 52 282 2.59e-47 162
MS.gene68181.t1 AT5G63600 30.137 292 192 6 52 340 29 311 1.99e-46 161
MS.gene68181.t1 AT3G19010 34.426 305 150 9 47 336 20 289 3.07e-46 160
MS.gene68181.t1 AT1G05010 33.333 273 169 6 56 324 4 267 3.73e-46 160
MS.gene68181.t1 AT3G51240 31.959 291 189 8 56 342 38 323 4.21e-46 161
MS.gene68181.t1 AT1G60980 32.979 282 175 5 54 323 55 334 7.27e-46 161
MS.gene68181.t1 AT1G77330 33.574 277 162 7 54 320 1 265 1.34e-45 158
MS.gene68181.t1 AT5G63600 30.034 293 192 7 52 340 29 312 2.04e-45 158
MS.gene68181.t1 AT5G07480 30.031 323 194 9 56 358 44 354 8.96e-45 157
MS.gene68181.t1 AT1G44090 31.949 313 202 6 47 351 54 363 9.08e-45 158
MS.gene68181.t1 AT3G19000 34.688 320 179 10 30 333 16 321 3.01e-44 156
MS.gene68181.t1 AT4G21200 31.475 305 184 7 29 318 3 297 2.74e-43 153
MS.gene68181.t1 AT5G63595 31.679 262 151 5 52 311 21 256 3.16e-43 151
MS.gene68181.t1 AT4G25420 31.206 282 184 4 53 326 58 337 3.91e-43 154
MS.gene68181.t1 AT5G51810 30.662 287 187 4 53 332 60 341 6.84e-42 150
MS.gene68181.t1 AT1G80340 31.515 330 198 10 30 348 28 340 2.12e-41 148
MS.gene68181.t1 AT3G19010 37.450 251 137 9 47 282 20 265 3.84e-41 146
MS.gene68181.t1 AT1G80330 29.355 310 197 10 56 353 49 348 5.77e-41 147
MS.gene68181.t1 AT1G06620 33.459 266 161 6 49 308 55 310 6.85e-41 147
MS.gene68181.t1 AT5G43935 31.206 282 157 8 56 329 19 271 9.88e-41 145
MS.gene68181.t1 AT5G43450 32.576 264 162 6 50 308 55 307 1.20e-40 147
MS.gene68181.t1 AT5G43440 29.338 317 203 8 53 358 59 365 4.16e-40 145
MS.gene68181.t1 AT5G63580 33.898 236 146 5 49 281 12 240 4.20e-40 142
MS.gene68181.t1 AT4G25300 38.462 195 110 3 170 358 72 262 5.79e-40 142
MS.gene68181.t1 AT5G63580 34.188 234 144 5 49 279 12 238 7.64e-40 141
MS.gene68181.t1 AT5G59530 30.094 319 207 8 50 358 52 364 1.98e-39 143
MS.gene68181.t1 AT1G78440 31.034 290 174 9 56 332 18 294 4.11e-39 142
MS.gene68181.t1 AT2G30830 32.069 290 183 8 51 333 49 331 1.36e-38 141
MS.gene68181.t1 AT3G51240 32.083 240 157 5 105 342 4 239 1.77e-38 139
MS.gene68181.t1 AT1G06645 30.945 307 190 10 49 342 66 363 9.75e-38 139
MS.gene68181.t1 AT5G59540 28.852 305 200 8 50 344 55 352 1.34e-37 139
MS.gene68181.t1 AT3G12900 28.758 306 202 10 59 357 59 355 2.15e-37 138
MS.gene68181.t1 AT3G61400 31.560 282 180 7 69 342 79 355 2.28e-37 138
MS.gene68181.t1 AT1G04380 30.345 290 182 7 52 333 41 318 2.49e-37 137
MS.gene68181.t1 AT1G06640 29.904 311 191 10 49 342 53 353 3.87e-36 135
MS.gene68181.t1 AT1G03410 31.525 295 183 9 49 333 50 335 1.48e-35 133
MS.gene68181.t1 AT5G12270 29.022 317 198 8 56 358 56 359 2.00e-35 132
MS.gene68181.t1 AT1G03410 31.525 295 183 9 49 333 87 372 2.38e-35 133
MS.gene68181.t1 AT3G19000 34.701 268 145 10 30 281 16 269 2.77e-35 130
MS.gene68181.t1 AT2G19590 29.470 302 190 10 47 342 2 286 7.87e-35 130
MS.gene68181.t1 AT5G07480 32.287 223 137 6 147 358 26 245 1.72e-34 127
MS.gene68181.t1 AT1G04350 28.972 321 204 10 50 358 52 360 1.72e-34 130
MS.gene68181.t1 AT2G30840 30.855 269 175 7 47 310 48 310 1.81e-34 130
MS.gene68181.t1 AT1G06620 32.773 238 144 6 49 280 55 282 2.75e-34 128
MS.gene68181.t1 AT1G06650 30.000 300 187 10 56 342 64 353 4.53e-34 129
MS.gene68181.t1 AT5G43450 31.780 236 145 6 50 280 55 279 1.02e-33 126
MS.gene68181.t1 AT5G43440 30.085 236 151 5 53 283 59 285 1.10e-32 124
MS.gene68181.t1 AT4G25420 30.380 237 155 4 53 281 58 292 6.80e-32 122
MS.gene68181.t1 AT3G49620 29.795 292 172 6 56 321 34 318 1.13e-31 122
MS.gene68181.t1 AT2G25450 28.767 292 195 7 49 333 48 333 1.45e-31 122
MS.gene68181.t1 AT4G21690 28.041 296 192 5 49 333 40 325 3.26e-31 121
MS.gene68181.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.32e-31 120
MS.gene68181.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.32e-31 120
MS.gene68181.t1 AT3G50210 28.966 290 182 8 56 321 8 297 6.32e-31 120
MS.gene68181.t1 AT1G04380 30.802 237 147 6 52 283 41 265 6.35e-31 118
MS.gene68181.t1 AT2G30840 30.112 269 171 8 47 310 48 304 1.02e-30 120
MS.gene68181.t1 AT1G03400 29.655 290 186 7 49 333 49 325 4.72e-30 118
MS.gene68181.t1 AT1G06640 31.004 229 141 6 56 277 64 282 8.40e-30 116
MS.gene68181.t1 AT1G06640 30.603 232 144 6 56 280 64 285 1.39e-29 116
MS.gene68181.t1 AT5G51810 29.289 239 157 4 53 284 60 293 1.49e-29 115
MS.gene68181.t1 AT3G61400 32.093 215 139 4 69 281 79 288 1.85e-29 115
MS.gene68181.t1 AT1G52820 29.412 323 211 10 41 357 1 312 2.99e-29 115
MS.gene68181.t1 AT5G59540 28.692 237 157 6 50 281 55 284 3.09e-29 114
MS.gene68181.t1 AT2G19590 30.153 262 161 9 87 342 26 271 3.25e-29 114
MS.gene68181.t1 AT3G49630 28.671 286 183 5 56 321 9 293 4.58e-29 115
MS.gene68181.t1 AT1G50960 27.407 270 184 6 52 317 36 297 7.92e-29 114
MS.gene68181.t1 AT3G49630 28.938 273 182 4 60 321 18 289 2.19e-28 113
MS.gene68181.t1 AT1G06650 30.252 238 149 7 56 286 64 291 5.59e-28 111
MS.gene68181.t1 AT1G30040 26.871 294 196 8 48 333 23 305 9.12e-28 111
MS.gene68181.t1 AT2G30840 28.992 238 159 6 47 280 48 279 4.60e-27 109
MS.gene68181.t1 AT3G46500 28.966 290 175 12 58 319 11 297 6.03e-26 106
MS.gene68181.t1 AT3G46500 29.412 272 171 11 58 311 11 279 7.50e-25 102
MS.gene68181.t1 AT1G03400 27.044 318 186 8 49 333 49 353 1.09e-24 103
MS.gene68181.t1 AT2G34555 28.070 285 185 10 56 332 27 299 2.92e-24 102
MS.gene68181.t1 AT1G14130 27.740 292 181 6 56 337 9 280 5.69e-24 100
MS.gene68181.t1 AT1G47990 29.293 297 178 12 53 333 12 292 1.79e-22 96.7
MS.gene68181.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene68181.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene68181.t1 AT1G14120 26.761 284 194 5 56 337 8 279 1.30e-21 94.4
MS.gene68181.t1 AT5G51310 29.642 307 175 15 54 336 3 292 2.36e-21 93.6
MS.gene68181.t1 AT1G52800 25.402 311 198 10 56 350 10 302 8.70e-21 92.0
MS.gene68181.t1 AT3G47190 24.848 330 202 11 24 336 3 303 9.97e-21 92.0
MS.gene68181.t1 AT4G03070 28.049 328 204 17 47 358 5 316 1.54e-20 91.3
MS.gene68181.t1 AT1G28030 26.433 314 214 10 50 353 7 313 4.37e-20 90.1
MS.gene68181.t1 AT5G58660 26.460 291 180 8 53 318 31 312 5.80e-20 90.1
MS.gene68181.t1 AT3G50210 29.878 164 110 2 163 321 52 215 1.88e-19 87.0
MS.gene68181.t1 AT1G02400 25.342 292 201 9 50 332 18 301 4.29e-19 87.4
MS.gene68181.t1 AT3G46490 26.370 292 187 11 48 314 1 289 5.97e-19 87.0
MS.gene68181.t1 AT3G46490 26.573 286 182 11 48 308 1 283 1.78e-18 85.5
MS.gene68181.t1 AT3G49630 30.000 160 110 2 163 321 62 220 2.76e-18 84.0
MS.gene68181.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.60e-18 82.8
MS.gene68181.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.60e-18 82.8
MS.gene68181.t1 AT4G16765 32.275 189 116 6 157 335 44 230 5.60e-18 82.8
MS.gene68181.t1 AT1G30040 25.207 242 162 8 48 281 23 253 1.28e-17 82.0
MS.gene68181.t1 AT4G16765 32.796 186 113 6 157 332 44 227 1.67e-17 81.3
MS.gene68181.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.60e-17 80.5
MS.gene68181.t1 AT3G46500 28.986 207 122 9 136 319 19 223 3.60e-17 80.5
MS.gene68181.t1 AT1G35190 28.929 280 177 9 77 336 29 306 4.59e-17 81.6
MS.gene68181.t1 AT4G23340 27.358 318 193 14 51 350 5 302 1.12e-16 80.5
MS.gene68181.t1 AT1G35190 27.957 279 158 10 77 336 29 283 2.24e-16 79.3
MS.gene68181.t1 AT3G46500 29.630 189 118 8 136 311 19 205 2.54e-16 77.8
MS.gene68181.t1 AT3G46500 31.902 163 92 6 174 319 1 161 8.65e-16 75.5
MS.gene68181.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.85e-15 74.3
MS.gene68181.t1 AT3G46500 33.562 146 88 5 173 311 31 174 1.85e-15 74.3
MS.gene68181.t1 AT4G22870 34.884 86 55 1 250 334 2 87 8.61e-14 67.4
MS.gene68181.t1 AT3G46480 30.172 232 127 11 106 316 37 254 1.54e-13 70.9
MS.gene68181.t1 AT4G16765 35.455 110 64 3 231 335 77 184 6.04e-13 67.4
MS.gene68181.t1 AT4G16765 33.099 142 84 5 157 288 44 184 4.18e-12 64.7
MS.gene68181.t1 AT3G46500 28.916 166 104 7 136 288 19 183 5.54e-12 64.3
MS.gene68181.t1 AT4G03050 32.031 128 82 5 227 351 271 396 5.81e-12 67.0
MS.gene68181.t1 AT4G03050 32.031 128 82 5 227 351 271 396 5.81e-12 67.0
MS.gene68181.t1 AT4G23340 33.813 139 86 4 217 350 47 184 9.99e-12 63.9
MS.gene68181.t1 AT1G02400 23.438 256 180 8 50 297 18 265 2.45e-11 63.9
MS.gene68181.t1 AT3G46500 25.871 201 112 9 136 319 19 199 4.09e-11 62.8
MS.gene68181.t1 AT4G22870 33.333 78 51 1 258 334 51 128 8.47e-11 60.1

Find 74 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 3.1:+92412646 MS.gene68181:CDS
TTAATCTCTTGTTCTGAATC+TGG 0.210279 3.1:-92415932 None:intergenic
ACATAACTATGATTAAATTT+TGG 0.220701 3.1:-92416068 None:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 3.1:+92415039 MS.gene68181:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 3.1:-92412491 None:intergenic
AATATTACCAACAGGGAAAA+AGG 0.234600 3.1:+92416032 MS.gene68181:CDS
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 3.1:+92412633 MS.gene68181:CDS
AATTATATCTACAATGAATT+AGG 0.265397 3.1:+92412497 MS.gene68181:CDS
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 3.1:+92414563 MS.gene68181:CDS
TTGAAATTCCTCTGATCTTC+CGG 0.295977 3.1:-92414613 None:intergenic
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 3.1:+92412634 MS.gene68181:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 3.1:+92415185 MS.gene68181:CDS
TTCACTGGTCTGTATAATAT+TGG 0.322104 3.1:-92415986 None:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.323173 3.1:-92415124 None:intergenic
GAATTTATACCTGAAATCAT+TGG 0.353550 3.1:-92414653 None:intergenic
ATCAGAGGAATTTCAAACTT+TGG 0.357694 3.1:+92414620 MS.gene68181:CDS
ACGAGAGCATCAGGGATTAT+TGG 0.359276 3.1:-92415308 None:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 3.1:-92415317 None:intergenic
CCAAACGGTATTGAAGGATA+TGG 0.374061 3.1:+92414523 MS.gene68181:CDS
TAATCTCTTGTTCTGAATCT+GGG 0.407176 3.1:-92415931 None:intergenic
GATGGCAGAATCGGTGGGTT+CGG 0.415598 3.1:+92412403 None:intergenic
AGTAGTGATAAATGAAGAAA+AGG 0.420128 3.1:+92415880 MS.gene68181:CDS
CCATATCCTTCAATACCGTT+TGG 0.420764 3.1:-92414523 None:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 3.1:+92412422 MS.gene68181:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 3.1:-92414652 None:intergenic
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 3.1:-92412602 None:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 3.1:+92412635 MS.gene68181:CDS
TACAATGAATTAGGTGGTGT+TGG 0.450827 3.1:+92412506 MS.gene68181:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 3.1:-92412572 None:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 3.1:+92415248 MS.gene68181:CDS
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 3.1:+92415109 MS.gene68181:CDS
TTTATCACTACTCTGTGTAC+TGG 0.484624 3.1:-92415869 None:intergenic
TTCTCCATCTACAGCACAGC+AGG 0.485461 3.1:+92412598 MS.gene68181:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 3.1:+92415088 MS.gene68181:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 3.1:+92414594 MS.gene68181:CDS
AGGGAGCCAAACGGTATTGA+AGG 0.498045 3.1:+92414517 MS.gene68181:CDS
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 3.1:+92412409 MS.gene68181:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 3.1:+92414585 MS.gene68181:CDS
CTACTCTGTGTACTGGACTC+TGG 0.522493 3.1:-92415862 None:intergenic
TTTACGCCTAGAACATGATC+AGG 0.523560 3.1:-92415191 None:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 3.1:+92415052 MS.gene68181:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 3.1:-92412588 None:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 3.1:+92412451 MS.gene68181:CDS
GGCGTAAAGCCACATGCTGA+TGG 0.536648 3.1:+92415206 MS.gene68181:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 3.1:+92414474 MS.gene68181:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 3.1:+92414440 MS.gene68181:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 3.1:+92415094 MS.gene68181:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 3.1:+92412397 None:intergenic
TAATGTTGGTGATCAAATAG+AGG 0.552527 3.1:+92415334 MS.gene68181:CDS
TTGTAGATATAATTATTTGG+TGG 0.579722 3.1:-92412488 None:intergenic
CCGTCCACTAGTCTGTCGAC+TGG 0.584898 3.1:-92415956 None:intergenic
CAGTCGACAGACTAGTGGAC+GGG 0.592554 3.1:+92415957 MS.gene68181:CDS
ACATGATCAGGCATAGGACA+TGG 0.597433 3.1:-92415179 None:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 3.1:+92412500 MS.gene68181:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 3.1:+92412398 None:intergenic
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 3.1:+92414441 MS.gene68181:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 3.1:+92415320 MS.gene68181:CDS
AAGTGCTAAAAGATAATCAG+TGG 0.615774 3.1:+92415276 MS.gene68181:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 3.1:+92414508 MS.gene68181:CDS
TGATAAATGAAGAAAAGGAA+AGG 0.617930 3.1:+92415885 MS.gene68181:CDS
GAGACAAGCTTGTCATACCA+TGG 0.626742 3.1:-92414426 None:intergenic
GATTGCTTCCTAAAGGAATG+TGG 0.631118 3.1:+92415116 MS.gene68181:CDS
AGGTACATCCGGAAGATCAG+AGG 0.633070 3.1:+92414605 MS.gene68181:CDS
GTGATTTAGGCAATAAACCA+TGG 0.634072 3.1:+92414409 MS.gene68181:intron
CCTAGAACATGATCAGGCAT+AGG 0.638733 3.1:-92415185 None:intergenic
GTTACACAGATAATGAGCAA+TGG 0.639099 3.1:+92415833 MS.gene68181:intron
TAAACCAGTCGACAGACTAG+TGG 0.643978 3.1:+92415952 MS.gene68181:CDS
CATTAATCACGAGAGCATCA+GGG 0.648254 3.1:-92415316 None:intergenic
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 3.1:-92412634 None:intergenic
CCAGTCGACAGACTAGTGGA+CGG 0.661367 3.1:+92415956 MS.gene68181:CDS
ATAGATGATCCATCAGCATG+TGG 0.675560 3.1:-92415215 None:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 3.1:-92412548 None:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 3.1:-92415175 None:intergenic
TGATCAGGCATAGGACATGG+AGG 0.683082 3.1:-92415176 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATATTCATTGTTAA+TGG - chr3.1:92414696-92414715 None:intergenic 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - chr3.1:92414695-92414714 None:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + chr3.1:92412497-92412516 MS.gene68181:CDS 15.0%
!! TCATTGTAGATATAATTATT+TGG - chr3.1:92412494-92412513 None:intergenic 15.0%
!! TTAAATCAATAAATCATAAC+AGG - chr3.1:92414206-92414225 None:intergenic 15.0%
!! TTGAATGTAAATATTAGATA+TGG + chr3.1:92414294-92414313 MS.gene68181:intron 15.0%
!! TTGATTTAAATTAGAGAATA+CGG + chr3.1:92414217-92414236 MS.gene68181:intron 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - chr3.1:92412976-92412995 None:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - chr3.1:92412977-92412996 None:intergenic 15.0%
!! AAATAGAAAATATTAGCAGT+TGG - chr3.1:92412694-92412713 None:intergenic 20.0%
!! AACAAAAATAGTAGATTTGT+AGG - chr3.1:92414820-92414839 None:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + chr3.1:92415039-92415058 MS.gene68181:CDS 20.0%
!! AATTTATACCTGAAATCATT+GGG - chr3.1:92414655-92414674 None:intergenic 20.0%
!! ACAAAAATAGTAGATTTGTA+GGG - chr3.1:92414819-92414838 None:intergenic 20.0%
!! ATCTATGATATATAACTGAT+AGG + chr3.1:92415782-92415801 MS.gene68181:intron 20.0%
!! CGAAAAAAAAAAATCATAAC+AGG - chr3.1:92413123-92413142 None:intergenic 20.0%
!! CTAAATCACACAAAATAATT+AGG - chr3.1:92414398-92414417 None:intergenic 20.0%
!! GAAGATAAAAACAAAAAACA+CGG - chr3.1:92415422-92415441 None:intergenic 20.0%
!! TAAACAACAAACAAATCAAA+AGG + chr3.1:92413744-92413763 MS.gene68181:intron 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - chr3.1:92414975-92414994 None:intergenic 20.0%
!! TATATCATAGATATAAGCTT+TGG - chr3.1:92415774-92415793 None:intergenic 20.0%
!! TTGTAGATATAATTATTTGG+TGG - chr3.1:92412491-92412510 None:intergenic 20.0%
!!! AACGTACAATTTTTTGTTAT+TGG + chr3.1:92414883-92414902 MS.gene68181:intron 20.0%
!!! AATTTTTTTCTGGTTCATAT+TGG + chr3.1:92414351-92414370 MS.gene68181:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + chr3.1:92414341-92414360 MS.gene68181:intron 20.0%
!!! ATATTTTCAATATTACCAAC+AGG + chr3.1:92416024-92416043 MS.gene68181:CDS 20.0%
!!! CTAATTATTTTGTGTGATTT+AGG + chr3.1:92414396-92414415 MS.gene68181:intron 20.0%
!!! TATTTTCAATATTACCAACA+GGG + chr3.1:92416025-92416044 MS.gene68181:CDS 20.0%
!!! TTGTTATTTTCACTTTTTTG+TGG + chr3.1:92415543-92415562 MS.gene68181:intron 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - chr3.1:92413287-92413306 None:intergenic 20.0%
! AAAATAATTAGGAACCTCAT+TGG - chr3.1:92414387-92414406 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr3.1:92414497-92414516 MS.gene68181:CDS 25.0%
! AATATCTAAGAGTTTGAACT+CGG - chr3.1:92414929-92414948 None:intergenic 25.0%
! AATATTTACATTCAACTTCG+TGG - chr3.1:92414289-92414308 None:intergenic 25.0%
! AATCAATAAATCATAACAGG+CGG - chr3.1:92414203-92414222 None:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + chr3.1:92413569-92413588 MS.gene68181:intron 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr3.1:92414498-92414517 MS.gene68181:CDS 25.0%
! AGTAGTGATAAATGAAGAAA+AGG + chr3.1:92415880-92415899 MS.gene68181:CDS 25.0%
! ATACGGTATAATCTGTTATT+TGG + chr3.1:92414234-92414253 MS.gene68181:intron 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - chr3.1:92412749-92412768 None:intergenic 25.0%
! ATATATTTCATGTTCAATGC+AGG + chr3.1:92415006-92415025 MS.gene68181:intron 25.0%
! ATCAGGATTGTAATTATGAT+CGG + chr3.1:92412767-92412786 MS.gene68181:intron 25.0%
! GAATTTATACCTGAAATCAT+TGG - chr3.1:92414656-92414675 None:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - chr3.1:92413101-92413120 None:intergenic 25.0%
! TATATCTACAATGAATTAGG+TGG + chr3.1:92412500-92412519 MS.gene68181:CDS 25.0%
! TCTAATACAACTATACTTAG+AGG - chr3.1:92413043-92413062 None:intergenic 25.0%
! TGATAAATGAAGAAAAGGAA+AGG + chr3.1:92415885-92415904 MS.gene68181:CDS 25.0%
! TTAACTTAGAAGATAGTATC+AGG + chr3.1:92412750-92412769 MS.gene68181:intron 25.0%
!! AAATCAACATAGTTTTTCAC+TGG - chr3.1:92416004-92416023 None:intergenic 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - chr3.1:92413627-92413646 None:intergenic 25.0%
!!! CAGTGCTTGTTTTTTTTTTT+TGG - chr3.1:92413300-92413319 None:intergenic 25.0%
!!! TAAATTTTGGAAGCTTCAAT+TGG - chr3.1:92416058-92416077 None:intergenic 25.0%
!!! TATTAAGTTTTGATGCAATC+AGG + chr3.1:92412948-92412967 MS.gene68181:intron 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr3.1:92414493-92414512 None:intergenic 25.0%
AAATAATTGTGTAACGGTCA+TGG - chr3.1:92414969-92414988 None:intergenic 30.0%
AACCTACATCAACTAAATGT+TGG + chr3.1:92415662-92415681 MS.gene68181:intron 30.0%
AAGTGCTAAAAGATAATCAG+TGG + chr3.1:92415276-92415295 MS.gene68181:CDS 30.0%
AATATGTAAGACGAAAGACA+TGG + chr3.1:92413710-92413729 MS.gene68181:intron 30.0%
AATATTACCAACAGGGAAAA+AGG + chr3.1:92416032-92416051 MS.gene68181:CDS 30.0%
AATTTGGTATTATAGTCTGG+TGG - chr3.1:92413565-92413584 None:intergenic 30.0%
ACCTACATCAACTAAATGTT+GGG + chr3.1:92415663-92415682 MS.gene68181:intron 30.0%
AGTATATCTTAAGGTACATC+CGG + chr3.1:92414594-92414613 MS.gene68181:CDS 30.0%
ATATGAAGATCTGATTGTGA+AGG - chr3.1:92412551-92412570 None:intergenic 30.0%
ATCAGAGGAATTTCAAACTT+TGG + chr3.1:92414620-92414639 MS.gene68181:CDS 30.0%
CAAAAAATTGTACGTTTGCA+AGG - chr3.1:92414879-92414898 None:intergenic 30.0%
CAAAGTGGACATTAGTTATA+AGG - chr3.1:92413086-92413105 None:intergenic 30.0%
CAACACAAACATAAATCTAG+AGG + chr3.1:92414099-92414118 MS.gene68181:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + chr3.1:92414563-92414582 MS.gene68181:CDS 30.0%
GACTATAATACCAAATTAGC+AGG + chr3.1:92413568-92413587 MS.gene68181:intron 30.0%
GACTGATAGAGTATATCTTA+AGG + chr3.1:92414585-92414604 MS.gene68181:CDS 30.0%
GCTAATTTGGTATTATAGTC+TGG - chr3.1:92413568-92413587 None:intergenic 30.0%
TAGATTTGTAGGGACTAAAA+AGG - chr3.1:92414809-92414828 None:intergenic 30.0%
TATTTAATAACTCCACCGAA+AGG + chr3.1:92414741-92414760 MS.gene68181:intron 30.0%
TATTTGAGAGTAGCATTCTT+GGG - chr3.1:92414332-92414351 None:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - chr3.1:92414333-92414352 None:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + chr3.1:92415052-92415071 MS.gene68181:CDS 30.0%
! GATTATCTTTTAGCACTTGA+AGG - chr3.1:92415274-92415293 None:intergenic 30.0%
! TAATCTCTTGTTCTGAATCT+GGG - chr3.1:92415934-92415953 None:intergenic 30.0%
! TGTAGGTTTTTCATATTTGC+AGG - chr3.1:92415650-92415669 None:intergenic 30.0%
! TTAATCTCTTGTTCTGAATC+TGG - chr3.1:92415935-92415954 None:intergenic 30.0%
! TTCACTGGTCTGTATAATAT+TGG - chr3.1:92415989-92416008 None:intergenic 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + chr3.1:92415334-92415353 MS.gene68181:CDS 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + chr3.1:92412819-92412838 MS.gene68181:intron 30.0%
!! TTTTAGGTGGTGATATGTTT+TGG - chr3.1:92413271-92413290 None:intergenic 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - chr3.1:92413615-92413634 None:intergenic 30.0%
!!! TTTGACTCAAGTTGGTTTTT+GGG - chr3.1:92413506-92413525 None:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - chr3.1:92413284-92413303 None:intergenic 30.0%
!!! TTTTTTCTGGTTCATATTGG+TGG + chr3.1:92414354-92414373 MS.gene68181:intron 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + chr3.1:92415241-92415260 MS.gene68181:CDS 30.0%
AAAATCACTGAACTTGGAAG+AGG + chr3.1:92415094-92415113 MS.gene68181:CDS 35.0%
AGTTCAAATCCCCTTGAATA+CGG + chr3.1:92412880-92412899 MS.gene68181:intron 35.0%
CACGACAAAAGTAGAAGAAT+CGG + chr3.1:92415580-92415599 MS.gene68181:intron 35.0%
CATAGCAAAATCACTGAACT+TGG + chr3.1:92415088-92415107 MS.gene68181:CDS 35.0%
CATTGTTAATGGGAACTTAG+TGG - chr3.1:92414685-92414704 None:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+CGG + chr3.1:92413538-92413557 MS.gene68181:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + chr3.1:92414474-92414493 MS.gene68181:CDS 35.0%
GCTATTTGTCATATTGTGTG+TGG - chr3.1:92415724-92415743 None:intergenic 35.0%
GTGATTTAGGCAATAAACCA+TGG + chr3.1:92414409-92414428 MS.gene68181:intron 35.0%
GTTACACAGATAATGAGCAA+TGG + chr3.1:92415833-92415852 MS.gene68181:intron 35.0%
TACAATGAATTAGGTGGTGT+TGG + chr3.1:92412506-92412525 MS.gene68181:CDS 35.0%
TATAAGGTTAAGACGCATGA+GGG - chr3.1:92413070-92413089 None:intergenic 35.0%
TATTCAAGGGGATTTGAACT+CGG - chr3.1:92412880-92412899 None:intergenic 35.0%
TGGACGAATCAAGATACAAA+TGG + chr3.1:92413188-92413207 MS.gene68181:intron 35.0%
TGTAGATGGAGAAATGAGTT+TGG - chr3.1:92412591-92412610 None:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - chr3.1:92413071-92413090 None:intergenic 35.0%
TTGAAATTCCTCTGATCTTC+CGG - chr3.1:92414616-92414635 None:intergenic 35.0%
TTGGATGGTTTAGGTGTTTA+CGG - chr3.1:92413808-92413827 None:intergenic 35.0%
TTTATCACTACTCTGTGTAC+TGG - chr3.1:92415872-92415891 None:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - chr3.1:92414648-92414667 None:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - chr3.1:92415090-92415109 None:intergenic 35.0%
! CATAGATATAAGCTTTGGTG+TGG - chr3.1:92415769-92415788 None:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - chr3.1:92414647-92414666 None:intergenic 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - chr3.1:92414646-92414665 None:intergenic 35.0%
! GTAACACATTCAAGTTCAAC+AGG - chr3.1:92415818-92415837 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr3.1:92414087-92414106 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr3.1:92413538-92413557 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr3.1:92413539-92413558 None:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - chr3.1:92413827-92413846 None:intergenic 35.0%
!! TCTTGTTTGTGCTTTTTGGA+TGG - chr3.1:92413823-92413842 None:intergenic 35.0%
!! TTGTGCTTTTTGGATGGTTT+AGG - chr3.1:92413817-92413836 None:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - chr3.1:92413254-92413273 None:intergenic 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - chr3.1:92413697-92413716 None:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - chr3.1:92413361-92413380 None:intergenic 35.0%
!!! CTTTGACTCAAGTTGGTTTT+TGG - chr3.1:92413507-92413526 None:intergenic 35.0%
!!! GTCTGGGAGTTTTATTTTGA+GGG - chr3.1:92413374-92413393 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - chr3.1:92413362-92413381 None:intergenic 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - chr3.1:92413243-92413262 None:intergenic 35.0%
AAATATGCAAGGGAGCCAAA+CGG + chr3.1:92414508-92414527 MS.gene68181:CDS 40.0%
AAATCCCCTTGAATACGGTT+TGG + chr3.1:92412885-92412904 MS.gene68181:intron 40.0%
AGGTTATTCAATTGTGGTGG+GGG - chr3.1:92413992-92414011 None:intergenic 40.0%
AGTTTGGCAATGTCAACAAC+TGG - chr3.1:92412575-92412594 None:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - chr3.1:92415218-92415237 None:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - chr3.1:92413437-92413456 None:intergenic 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + chr3.1:92412451-92412470 MS.gene68181:CDS 40.0%
CAACCCAGATCATAAAAAGG+CGG + chr3.1:92414177-92414196 MS.gene68181:intron 40.0%
CACGATAGTATCAGAGATGA+AGG - chr3.1:92415461-92415480 None:intergenic 40.0%
CCACAACCCAGATCATAAAA+AGG + chr3.1:92414174-92414193 MS.gene68181:intron 40.0%
CCATATCCTTCAATACCGTT+TGG - chr3.1:92414526-92414545 None:intergenic 40.0%
CCCAAAAACCCAATGATTTC+AGG + chr3.1:92414644-92414663 MS.gene68181:CDS 40.0%
CGAAATCCAACGACAAAACA+CGG + chr3.1:92414126-92414145 MS.gene68181:intron 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + chr3.1:92415248-92415267 MS.gene68181:CDS 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + chr3.1:92414441-92414460 MS.gene68181:CDS 40.0%
GAAATCCAACGACAAAACAC+GGG + chr3.1:92414127-92414146 MS.gene68181:intron 40.0%
GAGGTTATTCAATTGTGGTG+GGG - chr3.1:92413993-92414012 None:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + chr3.1:92415320-92415339 MS.gene68181:CDS 40.0%
GATTGCTTCCTAAAGGAATG+TGG + chr3.1:92415116-92415135 MS.gene68181:CDS 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - chr3.1:92414320-92414339 None:intergenic 40.0%
GGAGGTTATTCAATTGTGGT+GGG - chr3.1:92413994-92414013 None:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + chr3.1:92413869-92413888 MS.gene68181:intron 40.0%
GTCAGTTCTTTGACTCAAGT+TGG - chr3.1:92413514-92413533 None:intergenic 40.0%
GTTTAGGTGTTTACGGAGTT+TGG - chr3.1:92413801-92413820 None:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - chr3.1:92413868-92413887 None:intergenic 40.0%
TATGGTGTACCGTCTATATG+CGG - chr3.1:92413216-92413235 None:intergenic 40.0%
TCGAAGACAGCAAAACCTTT+CGG - chr3.1:92414759-92414778 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr3.1:92413704-92413723 None:intergenic 40.0%
TGGAGGTTATTCAATTGTGG+TGG - chr3.1:92413995-92414014 None:intergenic 40.0%
TGGTGGAGGTTATTCAATTG+TGG - chr3.1:92413998-92414017 None:intergenic 40.0%
TGTTAATGGGAACTTAGTGG+AGG - chr3.1:92414682-92414701 None:intergenic 40.0%
TTTACGCCTAGAACATGATC+AGG - chr3.1:92415194-92415213 None:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - chr3.1:92413253-92413272 None:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + chr3.1:92414523-92414542 MS.gene68181:CDS 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - chr3.1:92414177-92414196 None:intergenic 40.0%
! GCCCAACATTTAGTTGATGT+AGG - chr3.1:92415667-92415686 None:intergenic 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - chr3.1:92414073-92414092 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr3.1:92414082-92414101 None:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - chr3.1:92415320-92415339 None:intergenic 40.0%
!! AGGTGGTGATATGTTTTGGA+GGG - chr3.1:92413267-92413286 None:intergenic 40.0%
!! CATTAATCACGAGAGCATCA+GGG - chr3.1:92415319-92415338 None:intergenic 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + chr3.1:92415338-92415357 MS.gene68181:intron 40.0%
!! TAGGTGGTGATATGTTTTGG+AGG - chr3.1:92413268-92413287 None:intergenic 40.0%
!! TCGGCAGAGGTTGATATAAT+CGG + chr3.1:92412422-92412441 MS.gene68181:CDS 40.0%
!!! GGTCTGGGAGTTTTATTTTG+AGG - chr3.1:92413375-92413394 None:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - chr3.1:92413255-92413274 None:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - chr3.1:92413607-92413626 None:intergenic 40.0%
AAGACAGCAAAACCTTTCGG+TGG - chr3.1:92414756-92414775 None:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - chr3.1:92415182-92415201 None:intergenic 45.0%
AGATGCAACCTCTGTTACAC+GGG - chr3.1:92413867-92413886 None:intergenic 45.0%
AGGTGTTTACGGAGTTTGGA+GGG - chr3.1:92413797-92413816 None:intergenic 45.0%
CAGTCCAAACCGTATTCAAG+GGG - chr3.1:92412892-92412911 None:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - chr3.1:92415188-92415207 None:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + chr3.1:92415185-92415204 MS.gene68181:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr3.1:92415127-92415146 None:intergenic 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + chr3.1:92412646-92412665 MS.gene68181:CDS 45.0%
GAGACAAGCTTGTCATACCA+TGG - chr3.1:92414429-92414448 None:intergenic 45.0%
GATCTCGAAGCCAAATGAAC+CGG + chr3.1:92413667-92413686 MS.gene68181:intron 45.0%
GCAGTCCAAACCGTATTCAA+GGG - chr3.1:92412893-92412912 None:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + chr3.1:92414440-92414459 MS.gene68181:CDS 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + chr3.1:92415109-92415128 MS.gene68181:CDS 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - chr3.1:92413415-92413434 None:intergenic 45.0%
TAAACCAGTCGACAGACTAG+TGG + chr3.1:92415952-92415971 MS.gene68181:CDS 45.0%
TAGGTGTTTACGGAGTTTGG+AGG - chr3.1:92413798-92413817 None:intergenic 45.0%
TGCAGTCCAAACCGTATTCA+AGG - chr3.1:92412894-92412913 None:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - chr3.1:92413432-92413451 None:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - chr3.1:92413344-92413363 None:intergenic 45.0%
TTCGAAATGTGGCTCAGCTT+GGG - chr3.1:92413404-92413423 None:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - chr3.1:92413345-92413364 None:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + chr3.1:92412903-92412922 MS.gene68181:intron 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - chr3.1:92413482-92413501 None:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - chr3.1:92413485-92413504 None:intergenic 45.0%
! GGTTCATTTGGCTTCGAGAT+CGG - chr3.1:92413668-92413687 None:intergenic 45.0%
! GTTCATTTGGCTTCGAGATC+GGG - chr3.1:92413667-92413686 None:intergenic 45.0%
! TTATTCAATTGTGGTGGGGG+TGG - chr3.1:92413989-92414008 None:intergenic 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + chr3.1:92412833-92412852 MS.gene68181:intron 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - chr3.1:92415311-92415330 None:intergenic 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr3.1:92413204-92413223 MS.gene68181:intron 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - chr3.1:92413920-92413939 None:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - chr3.1:92413913-92413932 None:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - chr3.1:92413917-92413936 None:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - chr3.1:92414070-92414089 None:intergenic 45.0%
!! TGATGATGTGTGTTGGTGGT+TGG - chr3.1:92413934-92413953 None:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - chr3.1:92413914-92413933 None:intergenic 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - chr3.1:92413693-92413712 None:intergenic 45.0%
!!! CAATTGGCCTTTTTCCCTGT+TGG - chr3.1:92416042-92416061 None:intergenic 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - chr3.1:92413234-92413253 None:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - chr3.1:92413606-92413625 None:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - chr3.1:92413605-92413624 None:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - chr3.1:92413694-92413713 None:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - chr3.1:92413240-92413259 None:intergenic 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - chr3.1:92413604-92413623 None:intergenic 45.0%
AACATGGACCCGTGTAACAG+AGG + chr3.1:92413856-92413875 MS.gene68181:intron 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr3.1:92413840-92413859 MS.gene68181:intron 50.0%
AGGTACATCCGGAAGATCAG+AGG + chr3.1:92414605-92414624 MS.gene68181:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - chr3.1:92412605-92412624 None:intergenic 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + chr3.1:92412635-92412654 MS.gene68181:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + chr3.1:92412634-92412653 MS.gene68181:CDS 50.0%
CTACTCTGTGTACTGGACTC+TGG - chr3.1:92415865-92415884 None:intergenic 50.0%
CTTCGAAATGTGGCTCAGCT+TGG - chr3.1:92413405-92413424 None:intergenic 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + chr3.1:92412907-92412926 MS.gene68181:intron 50.0%
GATCAGGCATAGGACATGGA+GGG - chr3.1:92415178-92415197 None:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - chr3.1:92414161-92414180 None:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + chr3.1:92412633-92412652 MS.gene68181:CDS 50.0%
TGATCAGGCATAGGACATGG+AGG - chr3.1:92415179-92415198 None:intergenic 50.0%
TTCTCCATCTACAGCACAGC+AGG + chr3.1:92412598-92412617 MS.gene68181:CDS 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + chr3.1:92414517-92414536 MS.gene68181:CDS 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - chr3.1:92414183-92414202 None:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + chr3.1:92414370-92414389 MS.gene68181:intron 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + chr3.1:92413421-92413440 MS.gene68181:intron 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - chr3.1:92414045-92414064 None:intergenic 50.0%
ATGTGGCTCAGCTTGGGTGT+TGG - chr3.1:92413398-92413417 None:intergenic 55.0%
CCAGTCGACAGACTAGTGGA+CGG + chr3.1:92415956-92415975 MS.gene68181:CDS 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - chr3.1:92412637-92412656 None:intergenic 55.0%
CGTCCATACCTTGCGTCTTG+CGG - chr3.1:92413174-92413193 None:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - chr3.1:92414048-92414067 None:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + chr3.1:92412906-92412925 MS.gene68181:intron 55.0%
GGCGTAAAGCCACATGCTGA+TGG + chr3.1:92415206-92415225 MS.gene68181:CDS 55.0%
GGGTGAGTAGTGACAATGGG+CGG - chr3.1:92413341-92413360 None:intergenic 55.0%
GTCCATACCTTGCGTCTTGC+GGG - chr3.1:92413173-92413192 None:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - chr3.1:92413474-92413493 None:intergenic 55.0%
TCCATACCTTGCGTCTTGCG+GGG - chr3.1:92413172-92413191 None:intergenic 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - chr3.1:92413902-92413921 None:intergenic 55.0%
TGAGTAGTGACAATGGGCGG+TGG - chr3.1:92413338-92413357 None:intergenic 55.0%
TGTGGCTCAGCTTGGGTGTT+GGG - chr3.1:92413397-92413416 None:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - chr3.1:92413661-92413680 None:intergenic 55.0%
! CAGTCGACAGACTAGTGGAC+GGG + chr3.1:92415957-92415976 MS.gene68181:CDS 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - chr3.1:92414184-92414203 None:intergenic 55.0%
! GGGGTGATGATGTGTGTTGG+TGG - chr3.1:92413938-92413957 None:intergenic 55.0%
! GTGGGGGTGATGATGTGTGT+TGG - chr3.1:92413941-92413960 None:intergenic 55.0%
! TTTCGGTGGGCCGGTTCATT+TGG - chr3.1:92413680-92413699 None:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - chr3.1:92413959-92413978 None:intergenic 55.0%
GCGGCGTAGTGATGCAGTGA+TGG - chr3.1:92414051-92414070 None:intergenic 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - chr3.1:92413903-92413922 None:intergenic 60.0%
TCCCCGCAAGACGCAAGGTA+TGG + chr3.1:92413168-92413187 MS.gene68181:intron 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - chr3.1:92413660-92413679 None:intergenic 60.0%
! AGAATCGGTGGGTTCGGCAG+AGG + chr3.1:92412409-92412428 MS.gene68181:CDS 60.0%
! CCGTCCACTAGTCTGTCGAC+TGG - chr3.1:92415959-92415978 None:intergenic 60.0%
! CGCTGCCCGTGTTTTGTCGT+TGG - chr3.1:92414135-92414154 None:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - chr3.1:92413901-92413920 None:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - chr3.1:92413958-92413977 None:intergenic 60.0%
! GTGGCTCAGCTTGGGTGTTG+GGG - chr3.1:92413396-92413415 None:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - chr3.1:92413957-92413976 None:intergenic 60.0%
!! CAGCTTGGGTGTTGGGGTCT+GGG - chr3.1:92413390-92413409 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr3.1:92413581-92413600 None:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - chr3.1:92414035-92414054 None:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - chr3.1:92413960-92413979 None:intergenic 60.0%
!! TCAGCTTGGGTGTTGGGGTC+TGG - chr3.1:92413391-92413410 None:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - chr3.1:92413963-92413982 None:intergenic 60.0%
!! TGGTGATGCAGTGGTGGTGG+AGG - chr3.1:92414012-92414031 None:intergenic 60.0%
!!! TGTGCTGGTTTTCGGTGGGC+CGG - chr3.1:92413689-92413708 None:intergenic 60.0%
CAAAACACGGGCAGCGACGC+CGG + chr3.1:92414139-92414158 MS.gene68181:intron 65.0%
CGTCTTCCCCGCAAGACGCA+AGG + chr3.1:92413163-92413182 MS.gene68181:intron 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - chr3.1:92413659-92413678 None:intergenic 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - chr3.1:92413466-92413485 None:intergenic 65.0%
! CGGTGGTGATGCAGTGGTGG+TGG - chr3.1:92414015-92414034 None:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - chr3.1:92414021-92414040 None:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - chr3.1:92414032-92414051 None:intergenic 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + chr3.1:92414149-92414168 MS.gene68181:intron 65.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr3.1:92413598-92413617 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr3.1:92413599-92413618 None:intergenic 70.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr3.1:92413597-92413616 None:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+TGG - chr3.1:92414018-92414037 None:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - chr3.1:92413973-92413992 None:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - chr3.1:92413976-92413995 None:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - chr3.1:92413979-92413998 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr3.1:92413585-92413604 MS.gene68181:intron 80.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 92412404 92416078 92412404 ID=MS.gene68181
chr3.1 mRNA 92412404 92416078 92412404 ID=MS.gene68181.t1;Parent=MS.gene68181
chr3.1 exon 92412404 92412667 92412404 ID=MS.gene68181.t1.exon1;Parent=MS.gene68181.t1
chr3.1 CDS 92412404 92412667 92412404 ID=cds.MS.gene68181.t1;Parent=MS.gene68181.t1
chr3.1 exon 92414418 92414665 92414418 ID=MS.gene68181.t1.exon2;Parent=MS.gene68181.t1
chr3.1 CDS 92414418 92414665 92414418 ID=cds.MS.gene68181.t1;Parent=MS.gene68181.t1
chr3.1 exon 92415028 92415355 92415028 ID=MS.gene68181.t1.exon3;Parent=MS.gene68181.t1
chr3.1 CDS 92415028 92415355 92415028 ID=cds.MS.gene68181.t1;Parent=MS.gene68181.t1
chr3.1 exon 92415842 92416078 92415842 ID=MS.gene68181.t1.exon4;Parent=MS.gene68181.t1
chr3.1 CDS 92415842 92416078 92415842 ID=cds.MS.gene68181.t1;Parent=MS.gene68181.t1
Gene Sequence

>MS.gene68181

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGATGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGGTCAACTTTTCTGTATTTTAATACCAACTGCTAATATTTTCTATTTAATTATATATACTTTTATTTCAGTTAAGTATTCCTCTTAACTTAGAAGATAGTATCAGGATTGTAATTATGATCGGATCTAACTTCGTGAGAAGAGACACTAAGATAGTTTGTTTGTTGTTTACGAGGTATCAGCTCAGTGGTAAGAGTTTGAGCTTAAGATACCGAGTTCAAATCCCCTTGAATACGGTTTGGACTGCAAGCAGTTCTTGGTGGGTGCATTTTTAGCTACTTTTATTAAGTTTTGATGCAATCAGGATCCCATCAAATAAAGTTTTAGAATAATCATTATTGTCATTTTAACAAGAAAATATAATAAACATTGATCCTCTAAGTATAGTTGTATTAGAGAAGCCCTCATGCGTCTTAACCTTATAACTAATGTCCACTTTGTATATTTTATCTGTCCTGTTATGATTTTTTTTTTTCGAATCTGCAAATATTATTAAACGTCTTCCCCGCAAGACGCAAGGTATGGACGAATCAAGATACAAATGGTGCCGCATATAGACGGTACACCATAACCACCTAAAAACACCCCTGAAGATAAACCCTCCAAAACATATCACCACCTAAAACAAACTCCAAAAAAAAAAAACAAGCACTGTAAACACGATATACACCACCGCCCATTGTCACTACTCACCCACAAAGAACACCCTCAAAATAAAACTCCCAGACCCCAACACCCAAGCTGAGCCACATTTCGAAGAGCACCTAACCGAAGAAGGATCATGCAGCTATCACAAACCTCGCGACCTCTGAACCACCGAAAGAGCACAACACAAAGCCCAAAAACCAACTTGAGTCAAAGAACTGACTCCCGATCTCGAATCAAAAGTGATCGGTCCACCAGACTATAATACCAAATTAGCAGGGCACCCCTCGCCCCCGGTACACCAGAGAAAAAACCAAATCAAGTCAAACAAAGATTGCAGCTAGACCCCGACTCCCGATCTCGAAGCCAAATGAACCGGCCCACCGAAAACCAGCACACAATATGTAAGACGAAAGACATGGCATGCGAAGTTTAAACAACAAACAAATCAAAAGGAAAATGCTCAACACAGCGTGACATGCACCCTCCAAACTCCGTAAACACCTAAACCATCCAAAAAGCACAAACAAGAGCTAGTGACGACGAACATGGACCCGTGTAACAGAGGTTGCATCTAAAGGAAATCACCCCAACAAGCACCCACCTCCTCACTTAAAACACCAACCACCAACACACATCATCACCCCCACCACACTTCACCACCACCACGCATCACCACCCCCACCACAATTGAATAACCTCCACCACCACTGCATCACCACCGCGCAACACCACCACCATCACTGCATCACTACGCCGCCAAAACATCCTCACCAAGAAACAAGCAACAACACAAACATAAATCTAGAGGAAGACGAAATCCAACGACAAAACACGGGCAGCGACGCCGGTTTGAAGCGGAACCACAACCCAGATCATAAAAAGGCGGCCGCCTGTTATGATTTATTGATTTAAATTAGAGAATACGGTATAATCTGTTATTTGGATACTCAAGTAGTTCTATAATGATTCAAACCACGAAGTTGAATGTAAATATTAGATATGGCCTTTTCACAAACCCAAGAATGCTACTCTCAAATAATTTTTTTCTGGTTCATATTGGTGGCTGAGTTCCAATGAGGTTCCTAATTATTTTGTGTGATTTAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCAGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGTATAAATTCTTACCTCCACTAAGTTCCCATTAACAATGAATATTCTTTTAATTGACATGAAGTAACTAATACTTTATTTAATAACTCCACCGAAAGGTTTTGCTGTCTTCGATATTCATACACTGTAAGCATTTAAATACCTTTTTAGTCCCTACAAATCTACTATTTTTGTTTTTAGTCTCTGTAAAACATTTTTTTTTGTTTTTAATCCTTGCAAACGTACAATTTTTTGTTATTGGTCTTCACTATTTTTTTGATTCCGAGTTCAAACTCTTAGATATTTGAAAGAAGATTGTAAACCATGACCGTTACACAATTATTTTCTCTATTACACGAACTATATATTTCATGTTCAATGCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGTAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTGCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGGTTGGTAATTAACTACTAACTAAGTTCTTTATCTTTGTTTGTTTAAACTTTTTGTTTTTACTTCCGTGTTTTTTGTTTTTATCTTCACTTCAACTGATATTTCCTTCATCTCTGATACTATCGTGATTAATGTTTCTACATCAGAACTTGTTTTAGAAATCTATGATGTGATTAAGTTTTCACGAGATTGTTATTTTCACTTTTTTGTGGTATTTGCATATGTTCACGACAAAAGTAGAAGAATCGGTGTGCATGTTTTAATTCAAATTTACATCAACTAAATATTGAACACCTGCAAATATGAAAAACCTACATCAACTAAATGTTGGGCATCTTAGATATGACGATCTTACTATTTCATTCATCCACACACAATATGACAAATAGCAAGCTTGTCTATAGATTTAGTACCACACCAAAGCTTATATCTATGATATATAACTGATAGGATTGACACAACCTGTTGAACTTGAATGTGTTACACAGATAATGAGCAATGGAATTTTCCAGAGTCCAGTACACAGAGTAGTGATAAATGAAGAAAAGGAAAGGCTCACAGTAGCAATGTTCTGCATCCCAGATTCAGAACAAGAGATTAAACCAGTCGACAGACTAGTGGACGGGACAAAGCCAATATTATACAGACCAGTGAAAAACTATGTTGATTTATATTTTCAATATTACCAACAGGGAAAAAGGCCAATTGAAGCTTCCAAAATTTAA

Protein sequence

>MS.gene68181.t1

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFRDALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDQRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGVKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEIMSNGIFQSPVHRVVINEEKERLTVAMFCIPDSEQEIKPVDRLVDGTKPILYRPVKNYVDLYFQYYQQGKRPIEASKI