Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81083.t1 | XP_013444533.1 | 66.2 | 343 | 6 | 1 | 1 | 233 | 1 | 343 | 4.50E-117 | 430.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81083.t1 | Q9ZSA7 | 40.4 | 344 | 93 | 2 | 1 | 232 | 1 | 344 | 1.1e-66 | 254.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81083.t1 | A0A072TNY3 | 66.2 | 343 | 6 | 1 | 1 | 233 | 1 | 343 | 3.3e-117 | 430.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene44248 | MS.gene81083 | PPI |
MS.gene004422 | MS.gene81083 | PPI |
MS.gene017642 | MS.gene81083 | PPI |
MS.gene68181 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene040837 | PPI |
MS.gene68178 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene061671 | PPI |
MS.gene81083 | MS.gene36494 | PPI |
MS.gene35159 | MS.gene81083 | PPI |
MS.gene014238 | MS.gene81083 | PPI |
MS.gene68180 | MS.gene81083 | PPI |
MS.gene59930 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene89655 | PPI |
MS.gene81083 | MS.gene89654 | PPI |
MS.gene81083 | MS.gene68775 | PPI |
MS.gene08507 | MS.gene81083 | PPI |
MS.gene002734 | MS.gene81083 | PPI |
MS.gene014239 | MS.gene81083 | PPI |
MS.gene012107 | MS.gene81083 | PPI |
MS.gene061056 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene063124 | PPI |
MS.gene017546 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene028298 | PPI |
MS.gene81083 | MS.gene012106 | PPI |
MS.gene81083 | MS.gene023156 | PPI |
MS.gene063125 | MS.gene81083 | PPI |
MS.gene81083 | MS.gene23787 | PPI |
MS.gene81083 | MS.gene026406 | PPI |
MS.gene81083 | MS.gene96237 | PPI |
MS.gene44249 | MS.gene81083 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81083.t1 | MTR_8g024120 | 96.835 | 158 | 5 | 0 | 1 | 158 | 1 | 158 | 4.44e-111 | 322 |
MS.gene81083.t1 | MTR_8g024120 | 94.937 | 79 | 4 | 0 | 155 | 233 | 265 | 343 | 2.84e-48 | 162 |
MS.gene81083.t1 | MTR_3g092890 | 57.246 | 138 | 55 | 2 | 18 | 155 | 15 | 148 | 8.70e-51 | 168 |
MS.gene81083.t1 | MTR_3g092890 | 49.367 | 79 | 40 | 0 | 154 | 232 | 258 | 336 | 6.19e-20 | 87.0 |
MS.gene81083.t1 | MTR_1g062110 | 44.521 | 146 | 69 | 2 | 15 | 152 | 35 | 176 | 1.33e-35 | 128 |
MS.gene81083.t1 | MTR_1g062110 | 44.521 | 146 | 69 | 2 | 15 | 152 | 35 | 176 | 2.92e-35 | 129 |
MS.gene81083.t1 | MTR_1g070135 | 42.208 | 154 | 85 | 3 | 4 | 155 | 1 | 152 | 2.57e-33 | 122 |
MS.gene81083.t1 | MTR_1g070135 | 42.208 | 154 | 85 | 3 | 4 | 155 | 1 | 152 | 4.38e-33 | 122 |
MS.gene81083.t1 | MTR_7g081710 | 37.324 | 142 | 88 | 1 | 15 | 155 | 22 | 163 | 3.04e-32 | 120 |
MS.gene81083.t1 | MTR_7g081710 | 37.975 | 79 | 49 | 0 | 155 | 233 | 273 | 351 | 3.28e-11 | 62.4 |
MS.gene81083.t1 | MTR_1g070120 | 39.216 | 153 | 91 | 2 | 4 | 155 | 1 | 152 | 3.13e-32 | 120 |
MS.gene81083.t1 | MTR_1g048940 | 36.806 | 144 | 86 | 2 | 14 | 155 | 20 | 160 | 9.97e-31 | 116 |
MS.gene81083.t1 | MTR_1g070080 | 38.000 | 150 | 91 | 2 | 4 | 152 | 1 | 149 | 1.59e-28 | 110 |
MS.gene81083.t1 | MTR_7g102820 | 35.616 | 146 | 89 | 1 | 15 | 155 | 35 | 180 | 3.98e-28 | 110 |
MS.gene81083.t1 | MTR_5g065010 | 38.365 | 159 | 88 | 4 | 1 | 156 | 1 | 152 | 8.88e-27 | 105 |
MS.gene81083.t1 | MTR_5g065010 | 35.000 | 80 | 51 | 1 | 155 | 233 | 263 | 342 | 4.44e-12 | 65.1 |
MS.gene81083.t1 | MTR_5g082750 | 35.374 | 147 | 88 | 4 | 13 | 154 | 20 | 164 | 2.48e-24 | 99.4 |
MS.gene81083.t1 | MTR_7g016090 | 33.333 | 150 | 95 | 3 | 7 | 155 | 5 | 150 | 1.83e-22 | 94.0 |
MS.gene81083.t1 | MTR_7g016090 | 33.333 | 150 | 95 | 3 | 7 | 155 | 7 | 152 | 1.98e-22 | 94.0 |
MS.gene81083.t1 | MTR_1g070085 | 32.639 | 144 | 95 | 2 | 13 | 155 | 9 | 151 | 3.07e-22 | 93.6 |
MS.gene81083.t1 | MTR_1g070085 | 32.639 | 144 | 95 | 2 | 13 | 155 | 9 | 151 | 3.07e-22 | 93.6 |
MS.gene81083.t1 | MTR_7g068650 | 33.553 | 152 | 90 | 5 | 13 | 155 | 21 | 170 | 3.44e-21 | 90.9 |
MS.gene81083.t1 | MTR_6g015950 | 31.788 | 151 | 97 | 3 | 7 | 155 | 5 | 151 | 8.10e-21 | 89.4 |
MS.gene81083.t1 | MTR_5g022020 | 33.962 | 159 | 96 | 6 | 1 | 155 | 1 | 154 | 1.32e-20 | 89.4 |
MS.gene81083.t1 | MTR_5g032880 | 41.353 | 133 | 73 | 4 | 21 | 149 | 356 | 487 | 2.02e-20 | 89.7 |
MS.gene81083.t1 | MTR_5g032880 | 38.060 | 134 | 72 | 4 | 21 | 151 | 18 | 143 | 1.63e-17 | 81.3 |
MS.gene81083.t1 | MTR_5g032880 | 43.284 | 67 | 38 | 0 | 155 | 221 | 259 | 325 | 5.13e-13 | 68.2 |
MS.gene81083.t1 | MTR_5g032880 | 34.177 | 79 | 52 | 0 | 155 | 233 | 605 | 683 | 1.22e-11 | 64.3 |
MS.gene81083.t1 | MTR_3g070860 | 32.168 | 143 | 92 | 3 | 16 | 154 | 24 | 165 | 2.11e-20 | 88.6 |
MS.gene81083.t1 | MTR_4g015790 | 32.515 | 163 | 90 | 5 | 13 | 157 | 20 | 180 | 2.41e-20 | 88.6 |
MS.gene81083.t1 | MTR_7g016080 | 31.481 | 162 | 101 | 4 | 7 | 166 | 5 | 158 | 2.51e-20 | 88.2 |
MS.gene81083.t1 | MTR_3g091360 | 34.965 | 143 | 88 | 3 | 41 | 178 | 51 | 193 | 2.85e-20 | 88.2 |
MS.gene81083.t1 | MTR_3g058610 | 35.000 | 160 | 93 | 7 | 1 | 155 | 1 | 154 | 2.86e-20 | 88.2 |
MS.gene81083.t1 | MTR_5g032870 | 41.176 | 136 | 69 | 4 | 21 | 149 | 18 | 149 | 1.09e-19 | 86.7 |
MS.gene81083.t1 | MTR_5g032870 | 36.709 | 79 | 50 | 0 | 155 | 233 | 267 | 345 | 9.80e-14 | 69.7 |
MS.gene81083.t1 | MTR_8g075890 | 32.394 | 142 | 89 | 5 | 18 | 155 | 16 | 154 | 6.99e-19 | 84.3 |
MS.gene81083.t1 | MTR_3g088565 | 33.775 | 151 | 80 | 7 | 41 | 182 | 2 | 141 | 1.01e-18 | 83.6 |
MS.gene81083.t1 | MTR_8g075830 | 33.571 | 140 | 86 | 5 | 20 | 155 | 18 | 154 | 1.37e-18 | 83.6 |
MS.gene81083.t1 | MTR_3g043900 | 38.686 | 137 | 75 | 5 | 18 | 150 | 29 | 160 | 4.69e-18 | 82.0 |
MS.gene81083.t1 | MTR_3g043900 | 34.177 | 79 | 52 | 0 | 155 | 233 | 275 | 353 | 1.50e-12 | 66.2 |
MS.gene81083.t1 | MTR_3g091350 | 30.769 | 169 | 106 | 6 | 18 | 178 | 35 | 200 | 1.19e-17 | 80.9 |
MS.gene81083.t1 | MTR_3g026150 | 32.418 | 182 | 107 | 8 | 6 | 181 | 22 | 193 | 5.45e-17 | 78.2 |
MS.gene81083.t1 | MTR_3g063180 | 31.646 | 158 | 93 | 6 | 13 | 164 | 16 | 164 | 7.02e-17 | 79.0 |
MS.gene81083.t1 | MTR_3g026150 | 32.418 | 182 | 107 | 8 | 6 | 181 | 22 | 193 | 7.90e-17 | 78.6 |
MS.gene81083.t1 | MTR_2g068850 | 33.571 | 140 | 86 | 5 | 13 | 149 | 28 | 163 | 1.29e-16 | 76.3 |
MS.gene81083.t1 | MTR_7g062570 | 32.484 | 157 | 97 | 5 | 16 | 167 | 29 | 181 | 2.38e-16 | 77.4 |
MS.gene81083.t1 | MTR_3g045230 | 33.333 | 165 | 91 | 5 | 1 | 150 | 1 | 161 | 2.39e-16 | 77.4 |
MS.gene81083.t1 | MTR_3g045230 | 32.911 | 79 | 53 | 0 | 155 | 233 | 276 | 354 | 4.87e-12 | 64.7 |
MS.gene81083.t1 | MTR_7g062550 | 31.176 | 170 | 103 | 5 | 1 | 167 | 28 | 186 | 2.48e-16 | 77.4 |
MS.gene81083.t1 | MTR_2g068950 | 32.374 | 139 | 90 | 2 | 41 | 177 | 62 | 198 | 6.57e-16 | 76.3 |
MS.gene81083.t1 | MTR_2g068960 | 32.374 | 139 | 90 | 2 | 41 | 177 | 62 | 198 | 8.18e-16 | 75.9 |
MS.gene81083.t1 | MTR_2g068840 | 33.571 | 140 | 86 | 5 | 13 | 149 | 28 | 163 | 9.08e-16 | 75.9 |
MS.gene81083.t1 | MTR_1g070185 | 30.345 | 145 | 94 | 2 | 11 | 155 | 38 | 175 | 1.21e-15 | 75.5 |
MS.gene81083.t1 | MTR_2g069300 | 35.043 | 117 | 74 | 1 | 18 | 132 | 30 | 146 | 2.03e-15 | 74.7 |
MS.gene81083.t1 | MTR_8g041600 | 34.091 | 132 | 83 | 1 | 13 | 140 | 39 | 170 | 3.12e-15 | 73.6 |
MS.gene81083.t1 | MTR_2g069010 | 30.935 | 139 | 92 | 2 | 41 | 177 | 68 | 204 | 4.49e-15 | 73.9 |
MS.gene81083.t1 | MTR_8g041600 | 34.921 | 126 | 78 | 1 | 13 | 134 | 39 | 164 | 5.39e-15 | 73.6 |
MS.gene81083.t1 | MTR_7g029655 | 32.258 | 93 | 62 | 1 | 42 | 134 | 67 | 158 | 5.71e-15 | 73.6 |
MS.gene81083.t1 | MTR_7g062580 | 30.968 | 155 | 100 | 5 | 17 | 167 | 30 | 181 | 6.03e-15 | 73.2 |
MS.gene81083.t1 | MTR_7g045650 | 32.278 | 158 | 94 | 6 | 17 | 167 | 35 | 186 | 1.01e-14 | 72.4 |
MS.gene81083.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 41 | 140 | 26 | 127 | 1.11e-14 | 71.6 |
MS.gene81083.t1 | MTR_2g069070 | 32.353 | 102 | 67 | 1 | 41 | 140 | 48 | 149 | 1.11e-14 | 70.5 |
MS.gene81083.t1 | MTR_0032s0040 | 32.824 | 131 | 78 | 5 | 13 | 134 | 34 | 163 | 1.27e-14 | 72.4 |
MS.gene81083.t1 | MTR_8g028435 | 30.769 | 143 | 88 | 4 | 2 | 140 | 26 | 161 | 1.59e-14 | 72.0 |
MS.gene81083.t1 | MTR_2g069060 | 34.314 | 102 | 65 | 1 | 41 | 140 | 48 | 149 | 1.79e-14 | 72.0 |
MS.gene81083.t1 | MTR_1g093120 | 34.314 | 102 | 65 | 1 | 41 | 140 | 66 | 167 | 1.89e-14 | 72.0 |
MS.gene81083.t1 | MTR_5g055690 | 31.148 | 122 | 82 | 2 | 37 | 157 | 42 | 162 | 2.82e-14 | 70.5 |
MS.gene81083.t1 | MTR_7g062600 | 29.825 | 171 | 104 | 6 | 1 | 167 | 19 | 177 | 4.29e-14 | 70.9 |
MS.gene81083.t1 | MTR_2g069020 | 31.532 | 111 | 74 | 1 | 41 | 149 | 66 | 176 | 5.22e-14 | 70.5 |
MS.gene81083.t1 | MTR_5g048470 | 30.286 | 175 | 111 | 7 | 2 | 169 | 12 | 182 | 5.85e-14 | 70.5 |
MS.gene81083.t1 | MTR_2g069020 | 31.532 | 111 | 74 | 1 | 41 | 149 | 66 | 176 | 5.96e-14 | 70.5 |
MS.gene81083.t1 | MTR_5g055690 | 31.148 | 122 | 82 | 2 | 37 | 157 | 42 | 162 | 6.17e-14 | 70.5 |
MS.gene81083.t1 | MTR_5g055820 | 31.250 | 160 | 101 | 6 | 2 | 157 | 7 | 161 | 7.34e-14 | 70.1 |
MS.gene81083.t1 | MTR_3g072820 | 28.846 | 156 | 102 | 5 | 18 | 168 | 18 | 169 | 1.07e-13 | 69.7 |
MS.gene81083.t1 | MTR_1g032220 | 28.873 | 142 | 91 | 3 | 13 | 149 | 43 | 179 | 1.19e-13 | 69.7 |
MS.gene81083.t1 | MTR_2g437380 | 29.655 | 145 | 91 | 6 | 18 | 156 | 28 | 167 | 1.30e-13 | 69.3 |
MS.gene81083.t1 | MTR_2g437380 | 37.975 | 79 | 49 | 0 | 155 | 233 | 278 | 356 | 3.06e-12 | 65.5 |
MS.gene81083.t1 | MTR_8g064200 | 29.286 | 140 | 96 | 3 | 2 | 140 | 12 | 149 | 1.30e-13 | 69.3 |
MS.gene81083.t1 | MTR_7g056370 | 31.852 | 135 | 85 | 3 | 11 | 141 | 16 | 147 | 1.31e-13 | 67.8 |
MS.gene81083.t1 | MTR_8g064200 | 29.286 | 140 | 96 | 3 | 2 | 140 | 17 | 154 | 1.45e-13 | 69.3 |
MS.gene81083.t1 | MTR_1g032250 | 29.710 | 138 | 95 | 2 | 13 | 149 | 43 | 179 | 1.79e-13 | 68.9 |
MS.gene81083.t1 | MTR_5g055680 | 35.443 | 79 | 51 | 0 | 155 | 233 | 270 | 348 | 2.02e-13 | 68.9 |
MS.gene81083.t1 | MTR_4g099380 | 31.343 | 134 | 82 | 3 | 11 | 140 | 142 | 269 | 2.17e-13 | 68.2 |
MS.gene81083.t1 | MTR_4g093840 | 32.353 | 136 | 79 | 4 | 15 | 140 | 32 | 164 | 2.38e-13 | 68.6 |
MS.gene81083.t1 | MTR_8g041620 | 32.576 | 132 | 85 | 1 | 13 | 140 | 39 | 170 | 2.55e-13 | 68.6 |
MS.gene81083.t1 | MTR_1g032140 | 30.216 | 139 | 93 | 3 | 13 | 149 | 36 | 172 | 2.61e-13 | 68.6 |
MS.gene81083.t1 | MTR_7g105070 | 29.710 | 138 | 96 | 1 | 13 | 149 | 30 | 167 | 2.75e-13 | 68.6 |
MS.gene81083.t1 | MTR_3g072810 | 29.032 | 155 | 101 | 5 | 4 | 155 | 3 | 151 | 3.32e-13 | 68.2 |
MS.gene81083.t1 | MTR_2g069210 | 35.644 | 101 | 63 | 1 | 42 | 140 | 64 | 164 | 3.71e-13 | 68.2 |
MS.gene81083.t1 | MTR_8g009090 | 32.407 | 108 | 69 | 2 | 29 | 132 | 46 | 153 | 3.77e-13 | 68.2 |
MS.gene81083.t1 | MTR_0009s0050 | 34.177 | 79 | 52 | 0 | 155 | 233 | 90 | 168 | 5.49e-13 | 65.5 |
MS.gene81083.t1 | MTR_7g102720 | 34.545 | 110 | 67 | 3 | 41 | 149 | 36 | 141 | 6.10e-13 | 67.4 |
MS.gene81083.t1 | MTR_8g008930 | 31.250 | 144 | 87 | 5 | 2 | 140 | 26 | 162 | 6.46e-13 | 67.4 |
MS.gene81083.t1 | MTR_1g093140 | 27.778 | 126 | 89 | 1 | 17 | 140 | 48 | 173 | 8.88e-13 | 67.0 |
MS.gene81083.t1 | MTR_2g068800 | 29.927 | 137 | 76 | 3 | 13 | 149 | 28 | 144 | 9.80e-13 | 66.2 |
MS.gene81083.t1 | MTR_1g093110 | 28.926 | 121 | 76 | 2 | 30 | 140 | 50 | 170 | 1.17e-12 | 66.6 |
MS.gene81083.t1 | MTR_1g086550 | 33.028 | 109 | 65 | 2 | 32 | 140 | 10 | 110 | 1.73e-12 | 66.2 |
MS.gene81083.t1 | MTR_2g437380 | 37.975 | 79 | 49 | 0 | 155 | 233 | 184 | 262 | 1.74e-12 | 65.5 |
MS.gene81083.t1 | MTR_5g048550 | 35.897 | 78 | 50 | 0 | 156 | 233 | 271 | 348 | 1.91e-12 | 66.2 |
MS.gene81083.t1 | MTR_5g048550 | 31.579 | 133 | 82 | 4 | 14 | 143 | 20 | 146 | 7.88e-12 | 64.3 |
MS.gene81083.t1 | MTR_5g059130 | 31.847 | 157 | 94 | 6 | 18 | 167 | 20 | 170 | 1.98e-12 | 65.9 |
MS.gene81083.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 42 | 132 | 94 | 186 | 2.21e-12 | 65.9 |
MS.gene81083.t1 | MTR_1g034140 | 27.742 | 155 | 91 | 4 | 15 | 155 | 1 | 148 | 2.48e-12 | 65.9 |
MS.gene81083.t1 | MTR_8g009160 | 29.310 | 116 | 79 | 1 | 38 | 150 | 56 | 171 | 2.54e-12 | 65.9 |
MS.gene81083.t1 | MTR_8g063070 | 32.456 | 114 | 75 | 1 | 38 | 149 | 63 | 176 | 2.71e-12 | 65.9 |
MS.gene81083.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 42 | 132 | 94 | 186 | 2.74e-12 | 65.5 |
MS.gene81083.t1 | MTR_8g009080 | 34.409 | 93 | 59 | 1 | 42 | 132 | 94 | 186 | 2.79e-12 | 65.9 |
MS.gene81083.t1 | MTR_5g048570 | 35.443 | 79 | 51 | 0 | 155 | 233 | 268 | 346 | 2.89e-12 | 65.5 |
MS.gene81083.t1 | MTR_0009s0050 | 34.177 | 79 | 52 | 0 | 155 | 233 | 172 | 250 | 2.96e-12 | 64.7 |
MS.gene81083.t1 | MTR_0009s0050 | 34.177 | 79 | 52 | 0 | 155 | 233 | 172 | 250 | 2.99e-12 | 64.7 |
MS.gene81083.t1 | MTR_5g048850 | 28.571 | 140 | 96 | 4 | 2 | 140 | 7 | 143 | 3.00e-12 | 65.1 |
MS.gene81083.t1 | MTR_2g069190 | 36.559 | 93 | 57 | 1 | 42 | 132 | 68 | 160 | 3.13e-12 | 65.5 |
MS.gene81083.t1 | MTR_5g059140 | 29.936 | 157 | 99 | 5 | 18 | 167 | 18 | 170 | 4.17e-12 | 65.1 |
MS.gene81083.t1 | MTR_0009s0050 | 34.177 | 79 | 52 | 0 | 155 | 233 | 270 | 348 | 4.50e-12 | 65.1 |
MS.gene81083.t1 | MTR_0009s0050 | 34.177 | 79 | 52 | 0 | 155 | 233 | 270 | 348 | 4.69e-12 | 65.1 |
MS.gene81083.t1 | MTR_2g069090 | 34.409 | 93 | 59 | 1 | 42 | 132 | 68 | 160 | 4.95e-12 | 65.1 |
MS.gene81083.t1 | MTR_5g048850 | 28.571 | 140 | 96 | 4 | 2 | 140 | 7 | 143 | 5.20e-12 | 64.7 |
MS.gene81083.t1 | MTR_1g081840 | 45.763 | 59 | 32 | 0 | 154 | 212 | 285 | 343 | 5.56e-12 | 64.7 |
MS.gene81083.t1 | MTR_5g055900 | 32.911 | 79 | 53 | 0 | 155 | 233 | 270 | 348 | 6.92e-12 | 64.3 |
MS.gene81083.t1 | MTR_2g072910 | 35.443 | 79 | 51 | 0 | 155 | 233 | 276 | 354 | 1.02e-11 | 63.9 |
MS.gene81083.t1 | MTR_5g011250 | 26.437 | 174 | 104 | 8 | 1 | 157 | 1 | 167 | 1.13e-11 | 63.9 |
MS.gene81083.t1 | MTR_3g088745 | 45.763 | 59 | 32 | 0 | 154 | 212 | 268 | 326 | 1.15e-11 | 63.9 |
MS.gene81083.t1 | MTR_0328s0030 | 27.660 | 141 | 98 | 4 | 2 | 141 | 5 | 142 | 1.27e-11 | 63.5 |
MS.gene81083.t1 | MTR_8g062600 | 31.373 | 102 | 68 | 1 | 41 | 140 | 66 | 167 | 1.49e-11 | 63.5 |
MS.gene81083.t1 | MTR_2g072890 | 32.061 | 131 | 82 | 5 | 13 | 140 | 24 | 150 | 1.70e-11 | 63.2 |
MS.gene81083.t1 | MTR_0009s0410 | 28.205 | 156 | 107 | 5 | 2 | 155 | 6 | 158 | 2.36e-11 | 60.8 |
MS.gene81083.t1 | MTR_8g009110 | 29.126 | 103 | 70 | 1 | 41 | 140 | 59 | 161 | 2.77e-11 | 62.8 |
MS.gene81083.t1 | MTR_7g056347 | 31.373 | 102 | 68 | 1 | 41 | 140 | 66 | 167 | 2.80e-11 | 62.8 |
MS.gene81083.t1 | MTR_1g034130 | 40.000 | 60 | 36 | 0 | 155 | 214 | 3 | 62 | 3.00e-11 | 58.5 |
MS.gene81083.t1 | MTR_5g055800 | 29.134 | 127 | 87 | 3 | 15 | 141 | 21 | 144 | 3.17e-11 | 62.4 |
MS.gene81083.t1 | MTR_8g009170 | 24.457 | 184 | 117 | 5 | 2 | 181 | 26 | 191 | 3.54e-11 | 62.0 |
MS.gene81083.t1 | MTR_1g034060 | 36.364 | 99 | 53 | 3 | 18 | 108 | 4 | 100 | 4.28e-11 | 62.0 |
MS.gene81083.t1 | MTR_1g034120 | 36.364 | 99 | 53 | 3 | 18 | 108 | 4 | 100 | 4.32e-11 | 62.0 |
MS.gene81083.t1 | MTR_7g056393 | 29.412 | 102 | 70 | 1 | 41 | 140 | 66 | 167 | 4.75e-11 | 62.0 |
MS.gene81083.t1 | MTR_2g019370 | 32.075 | 106 | 58 | 3 | 37 | 140 | 23 | 116 | 4.91e-11 | 62.0 |
MS.gene81083.t1 | MTR_8g009170 | 24.457 | 184 | 117 | 5 | 2 | 181 | 26 | 191 | 5.64e-11 | 61.6 |
MS.gene81083.t1 | MTR_8g009150 | 30.189 | 106 | 71 | 1 | 38 | 140 | 56 | 161 | 6.12e-11 | 61.6 |
MS.gene81083.t1 | MTR_7g063730 | 30.216 | 139 | 89 | 5 | 39 | 171 | 61 | 197 | 6.38e-11 | 61.6 |
MS.gene81083.t1 | MTR_8g009120 | 30.189 | 106 | 71 | 1 | 38 | 140 | 56 | 161 | 6.64e-11 | 61.6 |
MS.gene81083.t1 | MTR_4g087120 | 45.000 | 60 | 33 | 0 | 155 | 214 | 268 | 327 | 6.79e-11 | 61.6 |
MS.gene81083.t1 | MTR_4g024660 | 29.060 | 117 | 71 | 2 | 41 | 155 | 66 | 172 | 7.68e-11 | 61.6 |
MS.gene81083.t1 | MTR_1g070110 | 41.096 | 73 | 42 | 1 | 84 | 155 | 4 | 76 | 8.04e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81083.t1 | AT4G10490 | 60.645 | 155 | 61 | 0 | 1 | 155 | 1 | 155 | 6.06e-66 | 207 |
MS.gene81083.t1 | AT4G10490 | 55.556 | 81 | 34 | 1 | 155 | 233 | 265 | 345 | 3.72e-25 | 101 |
MS.gene81083.t1 | AT4G10500 | 58.442 | 154 | 63 | 1 | 2 | 155 | 5 | 157 | 5.48e-62 | 197 |
MS.gene81083.t1 | AT4G10500 | 55.000 | 80 | 35 | 1 | 155 | 233 | 267 | 346 | 1.76e-24 | 99.8 |
MS.gene81083.t1 | AT5G24530 | 53.947 | 152 | 63 | 4 | 7 | 155 | 1 | 148 | 2.40e-52 | 172 |
MS.gene81083.t1 | AT5G24530 | 44.444 | 81 | 42 | 1 | 154 | 231 | 258 | 338 | 1.27e-15 | 75.1 |
MS.gene81083.t1 | AT2G36690 | 42.466 | 146 | 79 | 1 | 15 | 155 | 29 | 174 | 1.31e-32 | 122 |
MS.gene81083.t1 | AT2G36690 | 42.466 | 146 | 79 | 1 | 15 | 155 | 29 | 174 | 1.31e-32 | 122 |
MS.gene81083.t1 | AT2G44800 | 33.333 | 177 | 111 | 3 | 13 | 182 | 22 | 198 | 2.33e-31 | 118 |
MS.gene81083.t1 | AT3G60290 | 35.260 | 173 | 105 | 3 | 17 | 182 | 26 | 198 | 5.29e-31 | 117 |
MS.gene81083.t1 | AT5G07480 | 34.028 | 144 | 89 | 2 | 14 | 155 | 20 | 159 | 5.99e-26 | 103 |
MS.gene81083.t1 | AT5G05600 | 33.108 | 148 | 92 | 4 | 13 | 155 | 33 | 178 | 9.61e-21 | 88.6 |
MS.gene81083.t1 | AT5G05600 | 33.108 | 148 | 92 | 4 | 13 | 155 | 33 | 178 | 3.21e-20 | 88.2 |
MS.gene81083.t1 | AT3G13610 | 31.884 | 138 | 90 | 2 | 13 | 149 | 33 | 167 | 5.65e-19 | 84.7 |
MS.gene81083.t1 | AT1G55290 | 34.328 | 134 | 83 | 3 | 18 | 149 | 37 | 167 | 1.68e-18 | 83.6 |
MS.gene81083.t1 | AT3G11180 | 33.750 | 160 | 95 | 7 | 13 | 164 | 62 | 218 | 5.42e-18 | 82.4 |
MS.gene81083.t1 | AT3G11180 | 33.750 | 160 | 95 | 7 | 13 | 164 | 62 | 218 | 6.24e-18 | 82.0 |
MS.gene81083.t1 | AT3G55970 | 31.081 | 148 | 92 | 5 | 13 | 152 | 20 | 165 | 6.56e-18 | 81.3 |
MS.gene81083.t1 | AT3G12900 | 33.333 | 138 | 90 | 2 | 13 | 149 | 28 | 164 | 8.72e-18 | 81.3 |
MS.gene81083.t1 | AT3G51240 | 28.846 | 156 | 104 | 5 | 4 | 155 | 1 | 153 | 9.41e-18 | 81.3 |
MS.gene81083.t1 | AT3G55970 | 31.544 | 149 | 90 | 6 | 13 | 152 | 20 | 165 | 1.20e-17 | 80.9 |
MS.gene81083.t1 | AT1G06620 | 36.275 | 102 | 63 | 1 | 41 | 140 | 61 | 162 | 1.56e-17 | 79.7 |
MS.gene81083.t1 | AT1G06620 | 31.538 | 130 | 87 | 1 | 13 | 140 | 33 | 162 | 2.82e-17 | 80.1 |
MS.gene81083.t1 | AT1G78550 | 37.975 | 79 | 49 | 0 | 155 | 233 | 200 | 278 | 6.85e-16 | 75.1 |
MS.gene81083.t1 | AT5G12270 | 32.624 | 141 | 85 | 4 | 14 | 150 | 29 | 163 | 7.58e-16 | 75.9 |
MS.gene81083.t1 | AT1G78550 | 37.975 | 79 | 49 | 0 | 155 | 233 | 278 | 356 | 1.42e-15 | 75.1 |
MS.gene81083.t1 | AT1G78550 | 26.623 | 154 | 108 | 4 | 6 | 155 | 15 | 167 | 8.71e-11 | 61.2 |
MS.gene81083.t1 | AT5G63590 | 31.852 | 135 | 86 | 4 | 34 | 162 | 1 | 135 | 8.34e-15 | 72.4 |
MS.gene81083.t1 | AT5G43935 | 30.357 | 168 | 98 | 7 | 39 | 193 | 16 | 177 | 1.23e-14 | 72.0 |
MS.gene81083.t1 | AT2G38240 | 30.120 | 166 | 98 | 6 | 1 | 155 | 1 | 159 | 1.49e-14 | 72.0 |
MS.gene81083.t1 | AT2G30830 | 32.710 | 107 | 69 | 1 | 37 | 140 | 49 | 155 | 3.37e-14 | 71.2 |
MS.gene81083.t1 | AT3G19000 | 27.329 | 161 | 94 | 4 | 15 | 155 | 1 | 158 | 4.89e-14 | 70.1 |
MS.gene81083.t1 | AT1G17020 | 27.778 | 144 | 100 | 3 | 2 | 142 | 11 | 153 | 6.55e-14 | 70.5 |
MS.gene81083.t1 | AT3G19000 | 27.329 | 161 | 94 | 4 | 15 | 155 | 1 | 158 | 7.43e-14 | 70.1 |
MS.gene81083.t1 | AT3G61400 | 30.464 | 151 | 87 | 4 | 1 | 140 | 22 | 165 | 7.55e-14 | 69.7 |
MS.gene81083.t1 | AT5G08640 | 28.000 | 150 | 103 | 3 | 18 | 165 | 19 | 165 | 9.89e-14 | 69.7 |
MS.gene81083.t1 | AT5G08640 | 28.000 | 150 | 103 | 3 | 18 | 165 | 19 | 165 | 9.89e-14 | 69.7 |
MS.gene81083.t1 | AT3G61400 | 30.464 | 151 | 87 | 4 | 1 | 140 | 22 | 165 | 1.22e-13 | 69.7 |
MS.gene81083.t1 | AT1G04350 | 31.250 | 128 | 85 | 3 | 15 | 140 | 30 | 156 | 1.55e-13 | 69.3 |
MS.gene81083.t1 | AT2G30840 | 31.852 | 135 | 87 | 3 | 11 | 140 | 25 | 159 | 2.77e-13 | 68.6 |
MS.gene81083.t1 | AT2G30840 | 31.852 | 135 | 87 | 3 | 11 | 140 | 25 | 159 | 2.83e-13 | 68.6 |
MS.gene81083.t1 | AT2G30840 | 31.852 | 135 | 87 | 3 | 11 | 140 | 25 | 159 | 3.01e-13 | 68.2 |
MS.gene81083.t1 | AT1G77330 | 28.472 | 144 | 96 | 3 | 41 | 182 | 2 | 140 | 3.61e-13 | 67.8 |
MS.gene81083.t1 | AT4G25300 | 30.216 | 139 | 93 | 3 | 6 | 141 | 14 | 151 | 4.10e-13 | 68.2 |
MS.gene81083.t1 | AT1G03410 | 28.859 | 149 | 93 | 4 | 11 | 150 | 61 | 205 | 4.76e-13 | 68.2 |
MS.gene81083.t1 | AT1G03410 | 28.859 | 149 | 93 | 4 | 11 | 150 | 24 | 168 | 4.82e-13 | 67.8 |
MS.gene81083.t1 | AT1G02400 | 31.429 | 140 | 84 | 3 | 32 | 163 | 9 | 144 | 3.99e-12 | 65.1 |
MS.gene81083.t1 | AT1G02400 | 31.429 | 140 | 84 | 3 | 32 | 163 | 9 | 144 | 4.12e-12 | 64.3 |
MS.gene81083.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 41 | 140 | 63 | 165 | 4.21e-12 | 65.1 |
MS.gene81083.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 41 | 140 | 63 | 165 | 4.53e-12 | 64.7 |
MS.gene81083.t1 | AT3G21420 | 31.210 | 157 | 99 | 5 | 8 | 156 | 17 | 172 | 5.22e-12 | 64.7 |
MS.gene81083.t1 | AT1G06640 | 33.981 | 103 | 65 | 1 | 41 | 140 | 63 | 165 | 6.40e-12 | 64.7 |
MS.gene81083.t1 | AT2G25450 | 33.000 | 100 | 65 | 1 | 37 | 134 | 50 | 149 | 1.14e-11 | 63.9 |
MS.gene81083.t1 | AT1G03400 | 27.273 | 110 | 74 | 1 | 41 | 150 | 55 | 158 | 1.43e-11 | 63.5 |
MS.gene81083.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 41 | 132 | 63 | 157 | 1.52e-11 | 63.2 |
MS.gene81083.t1 | AT1G06645 | 34.737 | 95 | 59 | 1 | 41 | 132 | 76 | 170 | 1.76e-11 | 63.5 |
MS.gene81083.t1 | AT1G06650 | 34.737 | 95 | 59 | 1 | 41 | 132 | 63 | 157 | 1.78e-11 | 63.2 |
MS.gene81083.t1 | AT1G17010 | 27.329 | 161 | 111 | 5 | 2 | 157 | 11 | 170 | 1.86e-11 | 63.2 |
MS.gene81083.t1 | AT1G03400 | 27.273 | 110 | 74 | 1 | 41 | 150 | 55 | 158 | 2.20e-11 | 63.2 |
MS.gene81083.t1 | AT3G19010 | 32.323 | 99 | 63 | 2 | 40 | 137 | 26 | 121 | 2.63e-11 | 62.8 |
MS.gene81083.t1 | AT5G63595 | 29.008 | 131 | 81 | 5 | 29 | 155 | 9 | 131 | 2.82e-11 | 62.4 |
MS.gene81083.t1 | AT3G19010 | 32.323 | 99 | 63 | 2 | 40 | 137 | 26 | 121 | 3.25e-11 | 62.4 |
MS.gene81083.t1 | AT3G19010 | 32.323 | 99 | 63 | 2 | 40 | 137 | 26 | 121 | 3.25e-11 | 62.4 |
MS.gene81083.t1 | AT3G19010 | 32.323 | 99 | 63 | 2 | 40 | 137 | 26 | 121 | 3.57e-11 | 62.0 |
MS.gene81083.t1 | AT4G25420 | 34.444 | 90 | 54 | 2 | 17 | 104 | 39 | 125 | 4.61e-11 | 62.0 |
MS.gene81083.t1 | AT4G25420 | 45.000 | 60 | 33 | 0 | 154 | 213 | 292 | 351 | 7.18e-11 | 61.6 |
MS.gene81083.t1 | AT4G25420 | 29.167 | 120 | 79 | 3 | 17 | 134 | 39 | 154 | 5.77e-11 | 61.6 |
MS.gene81083.t1 | AT5G63580 | 31.933 | 119 | 70 | 4 | 41 | 155 | 18 | 129 | 6.29e-11 | 60.8 |
MS.gene81083.t1 | AT5G63580 | 31.933 | 119 | 70 | 4 | 41 | 155 | 18 | 129 | 6.60e-11 | 60.8 |
MS.gene81083.t1 | AT1G04380 | 30.769 | 104 | 71 | 1 | 37 | 140 | 40 | 142 | 7.57e-11 | 60.8 |
Find 49 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTCATTCTTTCACTTTC+TGG | 0.043305 | 8.4:+70916320 | None:intergenic |
CTGCCAACCCACCTTCTTTC+AGG | 0.174684 | 8.4:-70916166 | MS.gene81083:intron |
GCACATGCATGTCAAAATTA+TGG | 0.232786 | 8.4:-70916842 | MS.gene81083:CDS |
ATGAATACTACAACAAATTC+TGG | 0.275217 | 8.4:-70914970 | MS.gene81083:CDS |
GAAAGTCTAGTTGTCTTTAA+TGG | 0.283274 | 8.4:+70916284 | None:intergenic |
AATTTGAAGGGACATGATTA+AGG | 0.284326 | 8.4:+70916987 | None:intergenic |
GACATGCATGTGCAATCTTT+TGG | 0.333511 | 8.4:+70916852 | None:intergenic |
AGACCGAGAAAGTTTCAAAT+TGG | 0.357191 | 8.4:-70916244 | MS.gene81083:CDS |
ATCCCTACCATTGATCTTCA+AGG | 0.375888 | 8.4:-70916905 | MS.gene81083:CDS |
ATGTTATTTATAACCTCCTC+TGG | 0.376503 | 8.4:+70916374 | None:intergenic |
TCTCCAATTTGAAACTTTCT+CGG | 0.381665 | 8.4:+70916241 | None:intergenic |
TTGTCTATGAGTTGTGGAGC+TGG | 0.429262 | 8.4:+70915028 | None:intergenic |
ATTTGAAGGGACATGATTAA+GGG | 0.441945 | 8.4:+70916988 | None:intergenic |
TACAACAAATTCTGGAATAG+AGG | 0.452603 | 8.4:-70914962 | MS.gene81083:CDS |
CTGAAAGAAGGTGGGTTGGC+AGG | 0.457585 | 8.4:+70916167 | None:intergenic |
GTGAATTGAAGTTGAAGATC+TGG | 0.466830 | 8.4:+70916941 | None:intergenic |
TCAAATTTCATCAGACCCAT+TGG | 0.476236 | 8.4:-70916971 | MS.gene81083:CDS |
AACCTGTGTGGACATGTTCA+AGG | 0.478953 | 8.4:-70914927 | MS.gene81083:CDS |
TTGAAGATTATGTTCATGAA+TGG | 0.482362 | 8.4:-70916190 | MS.gene81083:CDS |
GCTGGTCTTATGATTGCATC+TGG | 0.487627 | 8.4:+70915046 | None:intergenic |
CTGAACGATTTGATGCATCA+AGG | 0.492517 | 8.4:+70916882 | None:intergenic |
TGGTGAATAGTGAGAAAGAG+AGG | 0.505640 | 8.4:-70915099 | MS.gene81083:CDS |
ATGGGTCTGATGAAATTTGA+AGG | 0.511132 | 8.4:+70916974 | None:intergenic |
AAGATCTGGACGATCACCAA+TGG | 0.532251 | 8.4:+70916955 | None:intergenic |
TGAAGGGACATGATTAAGGG+TGG | 0.539972 | 8.4:+70916991 | None:intergenic |
ATCAAGGCCTTGAAGATCAA+TGG | 0.540205 | 8.4:+70916898 | None:intergenic |
CTTATGATTGCATCTGGTGA+TGG | 0.559599 | 8.4:+70915052 | None:intergenic |
CATGATTAAGGGTGGAAACA+AGG | 0.560953 | 8.4:+70916999 | None:intergenic |
AGATCTGGACGATCACCAAT+GGG | 0.565354 | 8.4:+70916956 | None:intergenic |
GGTCTTCACATTGAAACTAG+TGG | 0.574098 | 8.4:+70916262 | None:intergenic |
AGGCCTTGAAGATCAATGGT+AGG | 0.575623 | 8.4:+70916902 | None:intergenic |
TGATCTTTGTCTATGAGTTG+TGG | 0.576761 | 8.4:+70915022 | None:intergenic |
TATGGCCACAATGAAGCCAT+TGG | 0.577357 | 8.4:-70917029 | MS.gene81083:CDS |
GGCCTTGAAGATCAATGGTA+GGG | 0.578631 | 8.4:+70916903 | None:intergenic |
GTACCTGAAAGAAGGTGGGT+TGG | 0.586591 | 8.4:+70916163 | None:intergenic |
GAAACAAGGTCGGTTACCAA+TGG | 0.597873 | 8.4:+70917013 | None:intergenic |
AATGGTAGGGATAGAATCTG+TGG | 0.604412 | 8.4:+70916916 | None:intergenic |
GGTTACCAATGGCTTCATTG+TGG | 0.612010 | 8.4:+70917024 | None:intergenic |
TCATGAACATAATCTTCAAG+AGG | 0.623180 | 8.4:+70916194 | None:intergenic |
TGGGTCTGATGAAATTTGAA+GGG | 0.624020 | 8.4:+70916975 | None:intergenic |
AACCTTGAACATGTCCACAC+AGG | 0.626453 | 8.4:+70914925 | None:intergenic |
GAGTGTGCTACATCGAGCAT+TGG | 0.627506 | 8.4:-70915119 | MS.gene81083:CDS |
ATTAAGGGTGGAAACAAGGT+CGG | 0.632454 | 8.4:+70917003 | None:intergenic |
TGGACAGTAGAACGTTGGAA+TGG | 0.641192 | 8.4:+70915072 | None:intergenic |
GGTGATGGACAGTAGAACGT+TGG | 0.656999 | 8.4:+70915067 | None:intergenic |
TGTGAATCATGGAGTTCCAG+AGG | 0.659619 | 8.4:-70916390 | MS.gene81083:CDS |
GAATCATGGAGTTCCAGAGG+AGG | 0.684834 | 8.4:-70916387 | MS.gene81083:CDS |
ACTTTCAAAAGAAACCTGTG+TGG | 0.752553 | 8.4:-70914939 | MS.gene81083:CDS |
GGTAGGGATAGAATCTGTGG+TGG | 0.754752 | 8.4:+70916919 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATAGTTCTTATAATATA+CGG | + | chr8.4:70916700-70916719 | None:intergenic | 10.0% |
!!! | TTTTATTTGTAAGAATAATT+TGG | + | chr8.4:70916609-70916628 | None:intergenic | 10.0% |
!! | AATCGAAAATAATATATTTC+CGG | - | chr8.4:70915913-70915932 | MS.gene81083:intron | 15.0% |
!! | TATTAAATTTAACGTAACAT+CGG | - | chr8.4:70916634-70916653 | MS.gene81083:intron | 15.0% |
!!! | AATTTGAAATTAAACTAATG+TGG | + | chr8.4:70915435-70915454 | None:intergenic | 15.0% |
!!! | ATATAATTCTTTTTATACGA+CGG | + | chr8.4:70915956-70915975 | None:intergenic | 15.0% |
!! | AATACCTTTATTGTCAATAT+TGG | - | chr8.4:70916386-70916405 | MS.gene81083:CDS | 20.0% |
!! | ACAATGAAAAGATTATCATA+AGG | + | chr8.4:70916012-70916031 | None:intergenic | 20.0% |
!! | CATAAAAAACCTATATTTCA+CGG | + | chr8.4:70915892-70915911 | None:intergenic | 20.0% |
!! | CTCATAATAAAATAAACAAG+TGG | + | chr8.4:70915299-70915318 | None:intergenic | 20.0% |
!! | TTGTAAACATTTCATATGTT+GGG | + | chr8.4:70915253-70915272 | None:intergenic | 20.0% |
!! | TTTATCTATGATATTTAGAG+AGG | - | chr8.4:70916082-70916101 | MS.gene81083:intron | 20.0% |
!!! | ATATTGACAATAAAGGTATT+AGG | + | chr8.4:70916386-70916405 | None:intergenic | 20.0% |
!!! | TATCATAAGGATTTAAGTTA+TGG | + | chr8.4:70915999-70916018 | None:intergenic | 20.0% |
!!! | TTTTTTAAGATTGTGAATCA+TGG | - | chr8.4:70915549-70915568 | MS.gene81083:intron | 20.0% |
! | ACATAAACGTTACAGTTTAT+AGG | + | chr8.4:70916511-70916530 | None:intergenic | 25.0% |
! | ATGAATACTACAACAAATTC+TGG | - | chr8.4:70916980-70916999 | MS.gene81083:CDS | 25.0% |
! | GTTGTAAACATTTCATATGT+TGG | + | chr8.4:70915254-70915273 | None:intergenic | 25.0% |
! | TGTAAACATTTCATATGTTG+GGG | + | chr8.4:70915252-70915271 | None:intergenic | 25.0% |
! | TTGAAGATTATGTTCATGAA+TGG | - | chr8.4:70915760-70915779 | MS.gene81083:intron | 25.0% |
!! | AACAAAATGGTAATGACATT+TGG | + | chr8.4:70916299-70916318 | None:intergenic | 25.0% |
!! | AATATCAGAAAGTTTAGGTT+TGG | - | chr8.4:70916160-70916179 | MS.gene81083:intron | 25.0% |
!! | ACAAAATGGTAATGACATTT+GGG | + | chr8.4:70916298-70916317 | None:intergenic | 25.0% |
!! | TCGAGTGTATAGTTTTTAAT+GGG | - | chr8.4:70916555-70916574 | MS.gene81083:intron | 25.0% |
!!! | ATATTTTTGTACCTGAAAGA+AGG | + | chr8.4:70915798-70915817 | None:intergenic | 25.0% |
!!! | TTTTTTAGTTCTTAATAGCC+TGG | - | chr8.4:70915170-70915189 | MS.gene81083:intron | 25.0% |
AAGTACTTAAGGATGGTAAA+TGG | - | chr8.4:70916342-70916361 | MS.gene81083:CDS | 30.0% | |
AATTTAACGTAACATCGGAA+AGG | - | chr8.4:70916639-70916658 | MS.gene81083:intron | 30.0% | |
AATTTGAAGGGACATGATTA+AGG | + | chr8.4:70914966-70914985 | None:intergenic | 30.0% | |
AGTACTTAAGGATGGTAAAT+GGG | - | chr8.4:70916343-70916362 | MS.gene81083:CDS | 30.0% | |
ATTTGAAGGGACATGATTAA+GGG | + | chr8.4:70914965-70914984 | None:intergenic | 30.0% | |
CAATTAGATCCGTGAAATAT+AGG | - | chr8.4:70915880-70915899 | MS.gene81083:intron | 30.0% | |
GAAAGTCTAGTTGTCTTTAA+TGG | + | chr8.4:70915669-70915688 | None:intergenic | 30.0% | |
GATGCAATATCAGAAAGTTT+AGG | - | chr8.4:70916155-70916174 | MS.gene81083:intron | 30.0% | |
GGTATAGATTGTATAAATGC+CGG | + | chr8.4:70915935-70915954 | None:intergenic | 30.0% | |
GTCACCAATATTGACAATAA+AGG | + | chr8.4:70916393-70916412 | None:intergenic | 30.0% | |
TCATGAACATAATCTTCAAG+AGG | + | chr8.4:70915759-70915778 | None:intergenic | 30.0% | |
TGTCAACTGAGTTATGTTTA+CGG | - | chr8.4:70916528-70916547 | MS.gene81083:intron | 30.0% | |
TTCTTCATTCTTTCACTTTC+TGG | + | chr8.4:70915633-70915652 | None:intergenic | 30.0% | |
TTGACTGAAATACCTGAATT+TGG | + | chr8.4:70916415-70916434 | None:intergenic | 30.0% | |
! | ATGTTATTTATAACCTCCTC+TGG | + | chr8.4:70915579-70915598 | None:intergenic | 30.0% |
! | CTCGAGTGTATAGTTTTTAA+TGG | - | chr8.4:70916554-70916573 | MS.gene81083:intron | 30.0% |
! | GATTACATAAACAAAGCACT+TGG | - | chr8.4:70916188-70916207 | MS.gene81083:CDS | 30.0% |
! | TCTCCAATTTGAAACTTTCT+CGG | + | chr8.4:70915712-70915731 | None:intergenic | 30.0% |
! | TGTTGATGTGGATTTGAAAT+AGG | - | chr8.4:70916786-70916805 | MS.gene81083:intron | 30.0% |
! | TTTAAGTTATGGTCGAAATG+TGG | + | chr8.4:70915988-70916007 | None:intergenic | 30.0% |
!! | ACAATAAAGGTATTAGGAAC+AGG | + | chr8.4:70916380-70916399 | None:intergenic | 30.0% |
!! | CAATAAAGGTATTAGGAACA+GGG | + | chr8.4:70916379-70916398 | None:intergenic | 30.0% |
!! | TACAACAAATTCTGGAATAG+AGG | - | chr8.4:70916988-70917007 | MS.gene81083:CDS | 30.0% |
ACTTTCAAAAGAAACCTGTG+TGG | - | chr8.4:70917011-70917030 | MS.gene81083:CDS | 35.0% | |
AGACCGAGAAAGTTTCAAAT+TGG | - | chr8.4:70915706-70915725 | MS.gene81083:intron | 35.0% | |
AGTATAGCAGACAATTGAGA+AGG | - | chr8.4:70916114-70916133 | MS.gene81083:intron | 35.0% | |
ATGGGTCTGATGAAATTTGA+AGG | + | chr8.4:70914979-70914998 | None:intergenic | 35.0% | |
GCACATGCATGTCAAAATTA+TGG | - | chr8.4:70915108-70915127 | MS.gene81083:CDS | 35.0% | |
GTCAACTGAGTTATGTTTAC+GGG | - | chr8.4:70916529-70916548 | MS.gene81083:intron | 35.0% | |
GTGAATTGAAGTTGAAGATC+TGG | + | chr8.4:70915012-70915031 | None:intergenic | 35.0% | |
TATATGCATGCATGTTGATG+TGG | - | chr8.4:70916774-70916793 | MS.gene81083:intron | 35.0% | |
TCAAATTTCATCAGACCCAT+TGG | - | chr8.4:70914979-70914998 | MS.gene81083:CDS | 35.0% | |
TGATCTTTGTCTATGAGTTG+TGG | + | chr8.4:70916931-70916950 | None:intergenic | 35.0% | |
TGGGTCTGATGAAATTTGAA+GGG | + | chr8.4:70914978-70914997 | None:intergenic | 35.0% | |
TTAGATCACCTACAACTTCA+TGG | + | chr8.4:70915485-70915504 | None:intergenic | 35.0% | |
! | CAATATTGGTGACCAAATTC+AGG | - | chr8.4:70916400-70916419 | MS.gene81083:intron | 35.0% |
! | CATTTTGTTGCAAAATGACG+TGG | - | chr8.4:70916310-70916329 | MS.gene81083:CDS | 35.0% |
! | TTTTGTACCTGAAAGAAGGT+GGG | + | chr8.4:70915794-70915813 | None:intergenic | 35.0% |
! | TTTTTGTACCTGAAAGAAGG+TGG | + | chr8.4:70915795-70915814 | None:intergenic | 35.0% |
!! | CACGTCATTTTGCAACAAAA+TGG | + | chr8.4:70916312-70916331 | None:intergenic | 35.0% |
!! | TTTAGTTCTTAATAGCCTGG+CGG | - | chr8.4:70915173-70915192 | MS.gene81083:intron | 35.0% |
AATATCACGTGAATCTGAGG+CGG | + | chr8.4:70916675-70916694 | None:intergenic | 40.0% | |
AATGGTAGGGATAGAATCTG+TGG | + | chr8.4:70915037-70915056 | None:intergenic | 40.0% | |
ATCAAGGCCTTGAAGATCAA+TGG | + | chr8.4:70915055-70915074 | None:intergenic | 40.0% | |
ATCCCTACCATTGATCTTCA+AGG | - | chr8.4:70915045-70915064 | MS.gene81083:CDS | 40.0% | |
ATTAAGGGTGGAAACAAGGT+CGG | + | chr8.4:70914950-70914969 | None:intergenic | 40.0% | |
CATGATTAAGGGTGGAAACA+AGG | + | chr8.4:70914954-70914973 | None:intergenic | 40.0% | |
CGTTACAGTTTATAGGTGTG+CGG | + | chr8.4:70916504-70916523 | None:intergenic | 40.0% | |
CTGAACGATTTGATGCATCA+AGG | + | chr8.4:70915071-70915090 | None:intergenic | 40.0% | |
CTTATGATTGCATCTGGTGA+TGG | + | chr8.4:70916901-70916920 | None:intergenic | 40.0% | |
GCAAATATCACGTGAATCTG+AGG | + | chr8.4:70916678-70916697 | None:intergenic | 40.0% | |
GGTCTTCACATTGAAACTAG+TGG | + | chr8.4:70915691-70915710 | None:intergenic | 40.0% | |
GGTTTGCAAGTACTTAAGGA+TGG | - | chr8.4:70916335-70916354 | MS.gene81083:CDS | 40.0% | |
TGGTGAATAGTGAGAAAGAG+AGG | - | chr8.4:70916851-70916870 | MS.gene81083:CDS | 40.0% | |
TTGTTGCAAAATGACGTGGT+TGG | - | chr8.4:70916314-70916333 | MS.gene81083:CDS | 40.0% | |
TTGTTGCACCATGAAGTTGT+AGG | - | chr8.4:70915474-70915493 | MS.gene81083:intron | 40.0% | |
! | AACAAAGCACTTGGCAAACA+TGG | - | chr8.4:70916197-70916216 | MS.gene81083:CDS | 40.0% |
! | GACATGCATGTGCAATCTTT+TGG | + | chr8.4:70915101-70915120 | None:intergenic | 40.0% |
!! | GGTTGGTTTGCAAGTACTTA+AGG | - | chr8.4:70916331-70916350 | MS.gene81083:CDS | 40.0% |
AACCTGTGTGGACATGTTCA+AGG | - | chr8.4:70917023-70917042 | MS.gene81083:CDS | 45.0% | |
AACCTTGAACATGTCCACAC+AGG | + | chr8.4:70917028-70917047 | None:intergenic | 45.0% | |
AAGATCTGGACGATCACCAA+TGG | + | chr8.4:70914998-70915017 | None:intergenic | 45.0% | |
AGATCTGGACGATCACCAAT+GGG | + | chr8.4:70914997-70915016 | None:intergenic | 45.0% | |
AGGCCTTGAAGATCAATGGT+AGG | + | chr8.4:70915051-70915070 | None:intergenic | 45.0% | |
CCTGAACCAGACCTAACATA+TGG | - | chr8.4:70916254-70916273 | MS.gene81083:CDS | 45.0% | |
GAAACAAGGTCGGTTACCAA+TGG | + | chr8.4:70914940-70914959 | None:intergenic | 45.0% | |
GGCAAACCATATGTTAGGTC+TGG | + | chr8.4:70916263-70916282 | None:intergenic | 45.0% | |
GGCCTTGAAGATCAATGGTA+GGG | + | chr8.4:70915050-70915069 | None:intergenic | 45.0% | |
GGTTACCAATGGCTTCATTG+TGG | + | chr8.4:70914929-70914948 | None:intergenic | 45.0% | |
TAGCCTGGCGGAAAATTCAT+AGG | - | chr8.4:70915185-70915204 | MS.gene81083:intron | 45.0% | |
TGAAGGGACATGATTAAGGG+TGG | + | chr8.4:70914962-70914981 | None:intergenic | 45.0% | |
TGGACAGTAGAACGTTGGAA+TGG | + | chr8.4:70916881-70916900 | None:intergenic | 45.0% | |
TGGCAAACATGGACAACACA+TGG | - | chr8.4:70916208-70916227 | MS.gene81083:CDS | 45.0% | |
TGTGAATCATGGAGTTCCAG+AGG | - | chr8.4:70915560-70915579 | MS.gene81083:intron | 45.0% | |
TGTGCGGCGTTCAATGAATA+TGG | + | chr8.4:70916488-70916507 | None:intergenic | 45.0% | |
TTGTCTATGAGTTGTGGAGC+TGG | + | chr8.4:70916925-70916944 | None:intergenic | 45.0% | |
! | ATGCCTATGAATTTTCCGCC+AGG | + | chr8.4:70915191-70915210 | None:intergenic | 45.0% |
! | CCATATGTTAGGTCTGGTTC+AGG | + | chr8.4:70916257-70916276 | None:intergenic | 45.0% |
! | GTGCTGGCAAACCATATGTT+AGG | + | chr8.4:70916268-70916287 | None:intergenic | 45.0% |
!! | GCTGGTCTTATGATTGCATC+TGG | + | chr8.4:70916907-70916926 | None:intergenic | 45.0% |
!!! | TTTATTTTTTCTTTTAAAAT+AGG | - | chr8.4:70916459-70916478 | MS.gene81083:intron | 5.0% |
ACATTTGGGTCAGCATGTGC+TGG | + | chr8.4:70916284-70916303 | None:intergenic | 50.0% | |
GAATCATGGAGTTCCAGAGG+AGG | - | chr8.4:70915563-70915582 | MS.gene81083:intron | 50.0% | |
GAGTGTGCTACATCGAGCAT+TGG | - | chr8.4:70916831-70916850 | MS.gene81083:intron | 50.0% | |
GGTAGGGATAGAATCTGTGG+TGG | + | chr8.4:70915034-70915053 | None:intergenic | 50.0% | |
GTACCTGAAAGAAGGTGGGT+TGG | + | chr8.4:70915790-70915809 | None:intergenic | 50.0% | |
! | GTTAGGTCTGGTTCAGGACA+TGG | + | chr8.4:70916251-70916270 | None:intergenic | 50.0% |
!! | GGTGATGGACAGTAGAACGT+TGG | + | chr8.4:70916886-70916905 | None:intergenic | 50.0% |
CTGCCAACCCACCTTCTTTC+AGG | - | chr8.4:70915784-70915803 | MS.gene81083:intron | 55.0% | |
! | AGGTCTGGTTCAGGACATGG+TGG | + | chr8.4:70916248-70916267 | None:intergenic | 55.0% |
! | GGTCTGGTTCAGGACATGGT+GGG | + | chr8.4:70916247-70916266 | None:intergenic | 55.0% |
!! | CTGAAAGAAGGTGGGTTGGC+AGG | + | chr8.4:70915786-70915805 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 70914922 | 70917050 | 70914922 | ID=MS.gene81083 |
chr8.4 | mRNA | 70914922 | 70917050 | 70914922 | ID=MS.gene81083.t1;Parent=MS.gene81083 |
chr8.4 | exon | 70916832 | 70917050 | 70916832 | ID=MS.gene81083.t1.exon1;Parent=MS.gene81083.t1 |
chr8.4 | CDS | 70916832 | 70917050 | 70916832 | ID=cds.MS.gene81083.t1;Parent=MS.gene81083.t1 |
chr8.4 | exon | 70916167 | 70916414 | 70916167 | ID=MS.gene81083.t1.exon2;Parent=MS.gene81083.t1 |
chr8.4 | CDS | 70916167 | 70916414 | 70916167 | ID=cds.MS.gene81083.t1;Parent=MS.gene81083.t1 |
chr8.4 | exon | 70914922 | 70915156 | 70914922 | ID=MS.gene81083.t1.exon3;Parent=MS.gene81083.t1 |
chr8.4 | CDS | 70914922 | 70915156 | 70914922 | ID=cds.MS.gene81083.t1;Parent=MS.gene81083.t1 |
Gene Sequence |
Protein sequence |