AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014323.t1 MTR_5g024340 65.278 360 118 3 24 382 23 376 5.81e-173 487
MS.gene014323.t1 MTR_1g086350 51.989 352 138 5 57 383 24 369 3.06e-121 355
MS.gene014323.t1 MTR_1g086350 52.161 347 135 5 62 383 45 385 9.88e-121 355
MS.gene014323.t1 MTR_3g107880 53.216 342 149 4 45 383 44 377 1.49e-120 354
MS.gene014323.t1 MTR_3g107880 53.509 342 147 5 45 383 44 376 1.02e-119 352
MS.gene014323.t1 MTR_3g107880 54.430 316 141 2 71 383 4 319 1.19e-119 350
MS.gene014323.t1 MTR_4g116420 52.500 320 143 4 70 383 67 383 4.32e-114 338
MS.gene014323.t1 MTR_2g033000 52.733 311 134 3 86 383 56 366 2.56e-110 328
MS.gene014323.t1 MTR_4g123080 52.733 311 134 2 86 383 51 361 1.48e-109 325
MS.gene014323.t1 MTR_4g123080 52.733 311 134 2 86 383 69 379 2.15e-109 326
MS.gene014323.t1 MTR_1g086350 53.285 274 102 4 130 383 16 283 1.86e-96 289
MS.gene014323.t1 MTR_4g123080 54.140 157 69 1 230 383 110 266 8.54e-51 171
MS.gene014323.t1 MTR_1g115570 40.435 230 121 7 129 355 125 341 5.45e-44 155
MS.gene014323.t1 MTR_1g014640 37.828 267 142 8 90 351 76 323 3.47e-43 153
MS.gene014323.t1 MTR_1g013400 37.828 267 142 8 90 351 76 323 3.47e-43 153
MS.gene014323.t1 MTR_3g105730 39.648 227 123 5 129 351 64 280 7.35e-43 151
MS.gene014323.t1 MTR_3g105730 39.648 227 123 5 129 351 42 258 1.02e-42 150
MS.gene014323.t1 MTR_1g050520 34.629 283 152 8 86 353 382 646 3.99e-40 150
MS.gene014323.t1 MTR_2g008850 37.008 254 134 7 104 351 1 234 6.82e-40 142
MS.gene014323.t1 MTR_5g071550 35.094 265 139 7 97 349 129 372 7.38e-40 145
MS.gene014323.t1 MTR_2g008850 36.059 269 145 8 90 351 32 280 2.53e-39 142
MS.gene014323.t1 MTR_4g094208 33.333 282 158 7 78 351 17 276 1.24e-38 140
MS.gene014323.t1 MTR_5g063940 35.039 254 139 7 104 351 1 234 3.34e-38 137
MS.gene014323.t1 MTR_3g074610 36.245 229 128 5 129 351 65 281 8.61e-38 137
MS.gene014323.t1 MTR_5g063940 35.039 254 139 7 104 351 48 281 2.20e-37 136
MS.gene014323.t1 MTR_6g081850 33.333 330 175 12 52 354 10 321 9.78e-37 136
MS.gene014323.t1 MTR_3g091060 36.364 231 131 6 130 355 125 344 4.15e-36 135
MS.gene014323.t1 MTR_1g014190 27.987 318 163 8 90 351 22 329 4.82e-36 135
MS.gene014323.t1 MTR_1g014190 27.987 318 163 8 90 351 60 367 9.87e-36 135
MS.gene014323.t1 MTR_3g464700 36.161 224 120 6 97 314 93 299 2.28e-35 132
MS.gene014323.t1 MTR_3g464650 32.950 261 150 7 97 349 69 312 5.68e-35 131
MS.gene014323.t1 MTR_3g105880 28.302 318 162 8 90 351 22 329 2.96e-34 130
MS.gene014323.t1 MTR_4g125810 29.296 355 181 11 36 349 176 501 2.82e-33 130
MS.gene014323.t1 MTR_8g463130 35.371 229 130 7 129 351 65 281 5.41e-33 125
MS.gene014323.t1 MTR_8g463130 34.934 229 131 6 129 351 37 253 6.37e-33 124
MS.gene014323.t1 MTR_5g071550 35.683 227 115 6 97 313 129 334 9.80e-33 126
MS.gene014323.t1 MTR_4g007440 27.673 318 165 7 89 351 21 328 1.97e-32 125
MS.gene014323.t1 MTR_2g078760 35.776 232 121 8 129 349 37 251 4.46e-32 122
MS.gene014323.t1 MTR_3g105880 28.214 280 140 6 90 318 22 291 6.04e-32 123
MS.gene014323.t1 MTR_2g078760 35.776 232 121 8 129 349 116 330 2.16e-31 122
MS.gene014323.t1 MTR_1g015110 33.588 262 130 9 130 353 290 545 2.76e-31 125
MS.gene014323.t1 MTR_2g040500 30.351 313 149 10 99 349 228 533 8.47e-30 120
MS.gene014323.t1 MTR_3g104710 34.884 258 124 9 130 349 286 537 1.20e-29 120
MS.gene014323.t1 MTR_3g491830 28.402 338 180 10 52 348 30 346 1.89e-29 117
MS.gene014323.t1 MTR_4g094542 31.878 229 137 6 129 351 149 364 1.08e-28 115
MS.gene014323.t1 MTR_3g115900 95.652 69 3 0 1 69 9 77 9.33e-28 105
MS.gene014323.t1 MTR_1g028300 33.213 277 152 9 93 349 114 377 3.59e-27 111
MS.gene014323.t1 MTR_3g068200 32.308 260 133 9 127 349 120 373 2.39e-26 109
MS.gene014323.t1 MTR_8g102550 29.524 315 177 9 73 364 108 400 4.13e-26 108
MS.gene014323.t1 MTR_5g009370 33.473 239 130 8 99 321 60 285 6.86e-25 104
MS.gene014323.t1 MTR_2g078760 34.066 182 106 5 129 304 116 289 1.01e-22 97.4
MS.gene014323.t1 MTR_1g067210 30.000 290 136 8 120 349 66 348 2.21e-22 97.8
MS.gene014323.t1 MTR_3g032700 30.000 230 112 9 130 316 68 291 2.65e-21 95.1
MS.gene014323.t1 MTR_7g100240 28.322 286 136 9 128 352 69 346 2.96e-21 94.4
MS.gene014323.t1 MTR_5g080680 32.353 204 114 5 130 315 132 329 7.11e-21 93.6
MS.gene014323.t1 MTR_1g116260 28.028 289 141 9 128 356 78 359 9.23e-21 93.2
MS.gene014323.t1 MTR_3g032660 29.310 232 115 9 128 316 66 291 1.01e-20 93.6
MS.gene014323.t1 MTR_4g118340 29.008 262 135 10 130 349 86 338 1.50e-20 92.8
MS.gene014323.t1 MTR_3g105730 40.336 119 70 1 129 246 64 182 1.90e-20 89.4
MS.gene014323.t1 MTR_5g071550 36.184 152 76 4 97 242 129 265 1.56e-19 88.2
MS.gene014323.t1 MTR_7g090530 27.922 308 127 14 130 362 69 356 1.67e-19 90.1
MS.gene014323.t1 MTR_7g090550 28.736 261 131 12 130 343 70 322 3.15e-19 89.4
MS.gene014323.t1 MTR_2g033910 26.471 306 157 10 128 371 73 372 3.60e-19 88.6
MS.gene014323.t1 MTR_0015s0140 28.049 246 134 8 128 336 77 316 1.87e-18 86.7
MS.gene014323.t1 MTR_8g074930 26.299 308 147 12 128 367 77 372 2.57e-18 86.3
MS.gene014323.t1 MTR_2g020970 29.181 281 155 11 130 373 87 360 3.40e-18 85.5
MS.gene014323.t1 MTR_4g120410 28.467 274 146 9 130 358 91 359 4.60e-18 85.1
MS.gene014323.t1 MTR_7g080170 34.545 165 84 4 166 311 74 233 5.90e-18 85.1
MS.gene014323.t1 MTR_1g016620 30.702 228 112 8 128 314 66 288 6.18e-18 84.3
MS.gene014323.t1 MTR_2g020970 29.961 257 139 9 130 349 87 339 1.16e-17 84.7
MS.gene014323.t1 MTR_7g080170 34.545 165 84 4 166 311 182 341 1.55e-17 84.3
MS.gene014323.t1 MTR_6g087000 26.038 265 142 8 130 349 124 379 2.76e-17 84.3
MS.gene014323.t1 MTR_6g087000 26.038 265 142 8 130 349 124 379 3.00e-17 84.3
MS.gene014323.t1 MTR_2g435550 30.000 280 132 13 132 359 94 361 5.13e-17 82.0
MS.gene014323.t1 MTR_7g081020 26.897 290 147 9 128 358 74 357 5.71e-17 82.0
MS.gene014323.t1 MTR_2g435550 30.000 280 132 13 132 359 80 347 6.04e-17 81.6
MS.gene014323.t1 MTR_1g106855 28.873 284 136 14 127 349 57 335 1.47e-16 80.9
MS.gene014323.t1 MTR_1g112840 26.014 296 163 9 128 367 79 374 1.50e-16 80.9
MS.gene014323.t1 MTR_1g106855 30.472 233 116 9 127 316 57 286 4.69e-16 78.6
MS.gene014323.t1 MTR_2g435550 32.743 226 103 11 132 314 94 313 1.20e-15 78.2
MS.gene014323.t1 MTR_7g021530 32.749 171 87 6 167 314 113 278 4.23e-15 76.3
MS.gene014323.t1 MTR_7g081020 27.234 235 128 7 128 325 74 302 1.23e-14 74.7
MS.gene014323.t1 MTR_7g021530 32.558 172 84 6 167 313 163 327 1.32e-14 75.1
MS.gene014323.t1 MTR_7g021530 32.558 172 84 6 167 313 204 368 1.91e-14 74.7
MS.gene014323.t1 MTR_3g032590 32.278 158 73 7 190 316 143 297 4.18e-14 73.9
MS.gene014323.t1 MTR_2g090190 28.333 240 109 9 130 313 90 322 7.59e-14 73.2
MS.gene014323.t1 MTR_4g113480 24.803 254 142 8 130 345 74 316 8.31e-14 73.2
MS.gene014323.t1 MTR_7g060770 24.597 248 143 6 129 334 262 507 8.95e-14 73.2
MS.gene014323.t1 MTR_1g110210 27.206 272 146 14 129 370 67 316 1.31e-13 71.6
MS.gene014323.t1 MTR_4g037470 27.698 278 130 12 93 313 66 329 2.22e-13 71.6
MS.gene014323.t1 MTR_8g074930 28.205 234 104 9 190 367 35 260 2.32e-13 70.1
MS.gene014323.t1 MTR_4g013295 26.596 282 139 13 130 355 78 347 2.69e-13 70.9
MS.gene014323.t1 MTR_5g005810 27.309 249 155 9 125 351 327 571 4.23e-13 71.2
MS.gene014323.t1 MTR_4g037470 28.750 240 111 10 130 314 105 339 4.42e-13 70.9
MS.gene014323.t1 MTR_0015s0140 29.545 176 89 6 190 336 93 262 5.09e-13 69.7
MS.gene014323.t1 MTR_1g083690 31.383 188 95 6 189 351 172 350 6.31e-13 69.7
MS.gene014323.t1 MTR_5g080680 32.237 152 85 4 130 263 132 283 1.43e-12 67.8
MS.gene014323.t1 MTR_4g094208 29.070 172 107 4 78 246 17 176 3.10e-12 65.9
MS.gene014323.t1 MTR_2g078760 33.065 124 70 4 129 246 116 232 9.58e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014323.t1 AT2G33700 71.094 384 97 6 5 383 3 377 0.0 553
MS.gene014323.t1 AT3G51470 65.730 356 107 3 27 382 18 358 9.41e-170 478
MS.gene014323.t1 AT3G51470 70.740 311 86 1 72 382 9 314 2.06e-164 463
MS.gene014323.t1 AT2G25620 52.450 347 151 5 44 383 49 388 1.30e-117 347
MS.gene014323.t1 AT2G25620 52.450 347 151 5 44 383 49 388 1.30e-117 347
MS.gene014323.t1 AT3G62260 47.765 358 165 4 48 383 26 383 3.67e-109 325
MS.gene014323.t1 AT3G62260 47.899 357 165 4 48 383 26 382 7.35e-109 324
MS.gene014323.t1 AT1G48040 46.628 341 155 4 68 382 41 380 4.08e-101 305
MS.gene014323.t1 AT3G62260 51.877 293 128 3 104 383 1 293 2.12e-100 300
MS.gene014323.t1 AT3G17250 49.062 320 141 8 81 383 107 421 1.64e-97 297
MS.gene014323.t1 AT5G10740 39.326 267 138 8 90 351 32 279 1.00e-46 163
MS.gene014323.t1 AT5G10740 39.326 267 138 8 90 351 32 279 1.00e-46 163
MS.gene014323.t1 AT4G31750 37.288 295 155 9 70 359 18 287 9.62e-45 157
MS.gene014323.t1 AT4G31750 37.288 295 155 9 70 359 18 287 9.62e-45 157
MS.gene014323.t1 AT4G31750 37.288 295 155 9 70 359 18 287 1.20e-44 156
MS.gene014323.t1 AT1G43900 37.407 270 138 10 90 351 122 368 3.65e-43 154
MS.gene014323.t1 AT5G24940 40.708 226 120 6 130 351 64 279 5.56e-43 155
MS.gene014323.t1 AT1G78200 36.471 255 137 7 104 351 1 237 1.55e-41 146
MS.gene014323.t1 AT1G78200 36.471 255 137 7 104 351 1 237 1.55e-41 146
MS.gene014323.t1 AT5G53140 33.835 266 154 6 93 354 103 350 3.04e-41 150
MS.gene014323.t1 AT5G53140 33.835 266 154 6 93 354 103 350 3.04e-41 150
MS.gene014323.t1 AT1G78200 36.471 255 137 7 104 351 46 282 1.33e-40 145
MS.gene014323.t1 AT1G78200 36.471 255 137 7 104 351 46 282 1.33e-40 145
MS.gene014323.t1 AT1G78200 36.471 255 137 7 104 351 46 282 1.33e-40 145
MS.gene014323.t1 AT2G40860 33.553 304 168 8 65 353 268 552 1.29e-39 148
MS.gene014323.t1 AT2G40860 33.553 304 168 8 65 353 366 650 1.32e-39 149
MS.gene014323.t1 AT1G67820 37.247 247 127 8 93 330 86 313 4.06e-39 144
MS.gene014323.t1 AT1G67820 37.247 247 127 8 93 330 122 349 6.25e-39 144
MS.gene014323.t1 AT1G22280 34.766 256 137 7 104 351 47 280 2.16e-37 137
MS.gene014323.t1 AT1G34750 34.118 255 136 7 104 349 48 279 2.21e-37 137
MS.gene014323.t1 AT1G34750 34.118 255 136 7 104 349 48 279 2.21e-37 137
MS.gene014323.t1 AT1G34750 34.118 255 136 7 104 349 48 279 2.21e-37 137
MS.gene014323.t1 AT4G31860 27.879 330 172 6 90 363 22 341 2.25e-37 139
MS.gene014323.t1 AT2G20630 34.498 229 132 5 129 351 62 278 5.50e-37 135
MS.gene014323.t1 AT2G20630 34.498 229 132 5 129 351 62 278 1.06e-36 135
MS.gene014323.t1 AT2G25070 28.313 332 172 6 90 365 22 343 2.93e-36 135
MS.gene014323.t1 AT2G25070 28.313 332 172 6 90 365 22 343 2.93e-36 135
MS.gene014323.t1 AT2G30020 35.496 262 144 8 97 349 145 390 3.91e-36 136
MS.gene014323.t1 AT1G18030 32.372 312 163 10 74 351 51 348 5.57e-36 134
MS.gene014323.t1 AT1G22280 35.115 262 134 9 104 351 47 286 2.89e-35 131
MS.gene014323.t1 AT4G28400 34.498 229 132 6 129 351 44 260 6.81e-35 129
MS.gene014323.t1 AT4G28400 34.498 229 132 6 129 351 66 282 1.89e-34 129
MS.gene014323.t1 AT2G40860 32.180 289 162 8 65 338 366 635 5.01e-34 133
MS.gene014323.t1 AT1G07160 33.712 264 147 8 97 349 128 374 1.00e-33 129
MS.gene014323.t1 AT2G40180 33.208 265 150 7 97 349 134 383 2.69e-32 125
MS.gene014323.t1 AT4G31860 28.214 280 140 5 90 318 22 291 5.56e-32 122
MS.gene014323.t1 AT3G15260 34.649 228 131 6 130 351 73 288 8.57e-31 119
MS.gene014323.t1 AT3G15260 34.649 228 131 6 130 351 73 288 8.57e-31 119
MS.gene014323.t1 AT5G57050 29.752 363 177 14 54 349 58 409 9.98e-31 122
MS.gene014323.t1 AT5G57050 30.556 324 164 13 76 349 57 369 1.40e-29 118
MS.gene014323.t1 AT4G26080 30.145 345 171 15 66 353 93 424 1.62e-29 119
MS.gene014323.t1 AT4G31860 28.030 264 129 5 90 302 22 275 1.06e-28 113
MS.gene014323.t1 AT1G18030 31.439 264 134 9 74 304 51 300 3.52e-28 112
MS.gene014323.t1 AT2G29380 31.930 285 149 11 99 349 85 358 9.66e-28 112
MS.gene014323.t1 AT1G07430 33.171 205 112 5 130 315 157 355 2.18e-26 110
MS.gene014323.t1 AT2G34740 30.870 230 139 7 129 351 118 334 3.49e-26 107
MS.gene014323.t1 AT1G72770 29.762 336 160 12 77 349 177 499 9.11e-26 108
MS.gene014323.t1 AT1G72770 29.762 336 160 12 77 349 177 499 9.11e-26 108
MS.gene014323.t1 AT1G72770 29.762 336 160 12 77 349 177 499 9.11e-26 108
MS.gene014323.t1 AT1G34750 33.516 182 107 4 129 304 65 238 5.28e-25 102
MS.gene014323.t1 AT4G27800 27.869 305 168 7 84 348 53 345 1.08e-24 104
MS.gene014323.t1 AT5G51760 30.714 280 134 8 123 349 137 409 1.09e-24 105
MS.gene014323.t1 AT5G51760 30.714 280 134 8 123 349 107 379 1.12e-24 104
MS.gene014323.t1 AT4G28400 32.418 182 109 4 129 304 66 239 7.45e-24 99.8
MS.gene014323.t1 AT2G40860 31.301 246 138 7 65 295 366 595 1.58e-23 102
MS.gene014323.t1 AT3G11410 29.259 270 152 7 73 315 86 343 2.26e-23 100
MS.gene014323.t1 AT5G02760 29.553 291 142 10 122 355 64 348 2.43e-23 100
MS.gene014323.t1 AT1G17550 28.521 284 145 7 117 349 223 499 4.59e-23 100
MS.gene014323.t1 AT1G17550 28.521 284 145 7 117 349 223 499 4.59e-23 100
MS.gene014323.t1 AT5G59220 31.330 233 136 8 99 315 119 343 1.33e-22 99.0
MS.gene014323.t1 AT3G06270 28.137 263 136 8 130 349 88 340 1.58e-21 95.1
MS.gene014323.t1 AT3G16800 30.818 318 155 14 79 353 55 350 8.72e-21 92.8
MS.gene014323.t1 AT3G16800 30.818 318 155 14 79 353 55 350 8.72e-21 92.8
MS.gene014323.t1 AT3G16800 30.818 318 155 14 79 353 55 350 8.72e-21 92.8
MS.gene014323.t1 AT4G27800 27.304 293 161 7 84 336 53 333 1.10e-20 92.4
MS.gene014323.t1 AT3G17090 29.010 293 143 11 128 361 82 368 1.47e-20 92.8
MS.gene014323.t1 AT4G27800 27.305 282 153 7 84 325 53 322 7.03e-20 90.1
MS.gene014323.t1 AT3G16800 34.419 215 105 8 166 353 50 255 8.64e-20 88.6
MS.gene014323.t1 AT3G16800 34.419 215 105 8 166 353 50 255 8.64e-20 88.6
MS.gene014323.t1 AT2G34740 31.016 187 113 6 129 308 114 291 9.89e-20 89.4
MS.gene014323.t1 AT2G34740 31.694 183 109 6 129 304 132 305 1.11e-19 89.4
MS.gene014323.t1 AT2G20050 27.757 263 137 8 130 349 143 395 2.39e-19 90.5
MS.gene014323.t1 AT2G20050 27.757 263 137 8 130 349 143 395 2.79e-19 90.5
MS.gene014323.t1 AT4G08260 29.956 227 115 6 129 349 18 206 3.99e-19 85.5
MS.gene014323.t1 AT3G51370 25.753 299 157 8 128 367 77 369 6.15e-19 87.8
MS.gene014323.t1 AT3G51370 25.753 299 157 8 128 367 77 369 6.15e-19 87.8
MS.gene014323.t1 AT5G06750 28.514 249 133 8 128 336 80 323 8.94e-19 87.4
MS.gene014323.t1 AT5G06750 28.514 249 133 8 128 336 80 323 8.94e-19 87.4
MS.gene014323.t1 AT5G26010 28.620 297 162 11 87 347 38 320 3.76e-18 85.1
MS.gene014323.t1 AT3G27140 31.624 234 101 8 129 360 18 194 4.43e-18 83.2
MS.gene014323.t1 AT4G38520 26.298 289 150 8 128 358 79 362 5.19e-18 85.5
MS.gene014323.t1 AT4G38520 26.298 289 150 8 128 358 79 362 5.19e-18 85.5
MS.gene014323.t1 AT3G17090 29.289 239 126 9 128 329 82 314 5.41e-18 84.3
MS.gene014323.t1 AT1G68410 28.053 303 167 13 88 364 37 314 1.18e-17 84.7
MS.gene014323.t1 AT1G68410 28.053 303 167 13 88 364 37 314 1.18e-17 84.7
MS.gene014323.t1 AT1G68410 28.053 303 167 13 88 364 37 314 1.18e-17 84.7
MS.gene014323.t1 AT1G68410 28.053 303 167 13 88 364 37 314 1.18e-17 84.7
MS.gene014323.t1 AT5G57050 29.688 256 130 10 54 264 58 308 1.72e-17 82.8
MS.gene014323.t1 AT3G12620 28.571 294 137 10 128 358 81 364 1.85e-17 83.6
MS.gene014323.t1 AT3G12620 28.571 294 137 10 128 358 81 364 1.85e-17 83.6
MS.gene014323.t1 AT5G19280 31.496 254 139 11 125 351 332 577 2.74e-16 80.9
MS.gene014323.t1 AT4G32950 29.279 222 111 8 128 316 70 278 7.85e-16 78.2
MS.gene014323.t1 AT3G55050 26.950 282 139 9 128 349 82 356 1.15e-15 78.2
MS.gene014323.t1 AT3G55050 26.950 282 139 9 128 349 82 356 1.15e-15 78.2
MS.gene014323.t1 AT3G02750 32.934 167 88 5 166 313 191 352 4.11e-15 77.0
MS.gene014323.t1 AT3G02750 32.934 167 88 5 166 313 191 352 4.11e-15 77.0
MS.gene014323.t1 AT5G36250 28.922 204 113 6 155 337 171 363 6.02e-15 76.6
MS.gene014323.t1 AT5G66080 25.166 302 158 10 128 367 80 375 7.36e-15 75.9
MS.gene014323.t1 AT5G27930 29.057 265 135 11 130 347 92 350 8.11e-15 75.5
MS.gene014323.t1 AT5G27930 29.057 265 135 11 130 347 92 350 8.11e-15 75.5
MS.gene014323.t1 AT1G47380 27.203 261 150 10 129 365 63 307 1.23e-14 75.5
MS.gene014323.t1 AT5G19280 30.303 264 139 12 125 351 332 587 1.91e-14 75.5
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 151 352 2.82e-14 74.3
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 151 352 2.82e-14 74.3
MS.gene014323.t1 AT1G09160 25.703 249 145 10 129 353 67 299 3.41e-14 73.9
MS.gene014323.t1 AT1G09160 25.703 249 145 10 129 353 67 299 3.41e-14 73.9
MS.gene014323.t1 AT3G51370 27.074 229 110 6 190 367 62 284 3.61e-14 72.8
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 111 312 3.77e-14 73.9
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 111 312 3.77e-14 73.9
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 111 312 3.77e-14 73.9
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 111 312 3.77e-14 73.9
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 217 418 4.51e-14 73.9
MS.gene014323.t1 AT1G79630 30.986 213 110 8 189 375 221 422 5.20e-14 73.9
MS.gene014323.t1 AT1G16220 34.043 141 70 4 189 311 198 333 5.91e-14 73.6
MS.gene014323.t1 AT5G59220 30.000 180 108 6 99 262 119 296 4.56e-13 69.7
MS.gene014323.t1 AT4G33920 25.079 315 151 12 111 357 47 344 4.85e-13 70.5
MS.gene014323.t1 AT1G22280 32.877 146 83 4 104 246 47 180 4.93e-13 67.8
MS.gene014323.t1 AT4G03415 28.994 169 96 4 165 314 169 332 7.41e-13 70.1
MS.gene014323.t1 AT4G03415 28.994 169 96 4 165 314 169 332 7.41e-13 70.1
MS.gene014323.t1 AT4G03415 28.994 169 96 4 165 314 169 332 7.41e-13 70.1
MS.gene014323.t1 AT3G05640 29.150 247 125 12 130 337 93 328 1.01e-12 69.3
MS.gene014323.t1 AT3G05640 29.150 247 125 12 130 337 93 328 1.01e-12 69.3
MS.gene014323.t1 AT3G05640 29.150 247 125 12 130 337 93 328 1.01e-12 69.3
MS.gene014323.t1 AT5G01700 27.393 303 158 12 130 384 29 317 1.51e-12 68.6
MS.gene014323.t1 AT1G72770 28.017 232 114 7 77 262 177 401 1.63e-12 68.9
MS.gene014323.t1 AT1G72770 28.017 232 114 7 77 262 177 401 1.63e-12 68.9
MS.gene014323.t1 AT5G01700 27.393 303 158 12 130 384 78 366 2.61e-12 68.2
MS.gene014323.t1 AT5G06750 30.726 179 87 6 190 336 68 241 6.17e-12 66.2
MS.gene014323.t1 AT5G36250 27.064 218 113 7 155 337 171 377 1.05e-11 66.6
MS.gene014323.t1 AT1G03590 28.571 168 96 5 166 314 160 322 1.42e-11 66.2

Find 112 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATACAATTTGGTTTC+TGG 0.063429 3.4:+98863294 None:intergenic
GCTTTAACTGCACTTGTATT+TGG 0.106810 3.4:-98863740 MS.gene014323:CDS
GGATGATGAATTCTTGATTA+TGG 0.180271 3.4:-98863108 MS.gene014323:CDS
CCTCTTCCCGGAGCTTTCTA+TGG 0.196448 3.4:-98864450 MS.gene014323:CDS
AGTCTTTCTGAAATACAATT+TGG 0.227111 3.4:+98863287 None:intergenic
AGTCCTCAACAATGAGTTTA+AGG 0.235742 3.4:+98863867 None:intergenic
TCGCCTTCTAGTATTGTAAT+TGG 0.239407 3.4:+98865364 None:intergenic
GATAATGATGATGACAAATT+AGG 0.274200 3.4:-98865322 MS.gene014323:CDS
TGCAGCCAGTTTCAATCTAT+TGG 0.280570 3.4:+98865222 None:intergenic
AAGAGGACCTAAACAATATA+TGG 0.314058 3.4:-98864532 MS.gene014323:CDS
ACTTCAAATGTTCCTCTTCC+CGG 0.314733 3.4:-98864462 MS.gene014323:CDS
CTTTAACTGCACTTGTATTT+GGG 0.315593 3.4:-98863739 MS.gene014323:CDS
CTCATTGTTCAGGTGTTTGA+TGG 0.330417 3.4:-98863932 MS.gene014323:intron
AGAAAGCCTTACTTTACTTA+AGG 0.331641 3.4:-98862859 MS.gene014323:CDS
CTCTTCCCGGAGCTTTCTAT+GGG 0.334929 3.4:-98864449 MS.gene014323:CDS
TCATCTTCCATATATTGTTT+AGG 0.337678 3.4:+98864525 None:intergenic
TCTCCCCAGATCCTCCTTCC+AGG 0.343292 3.4:-98862923 MS.gene014323:CDS
GAGTGCCGAGCCAGAGTTGC+AGG 0.350375 3.4:-98863147 MS.gene014323:CDS
TCTATCCTGGAAGGAGGATC+TGG 0.353595 3.4:+98862918 None:intergenic
GAAACTGGCTGCATCAGATT+TGG 0.357220 3.4:-98865212 MS.gene014323:intron
GATTGTAATGCATGTGGATA+TGG 0.378523 3.4:-98865398 None:intergenic
AGGCACGTGAAACAGATAAT+TGG 0.379392 3.4:+98863216 None:intergenic
GAAAGCCTTACTTTACTTAA+GGG 0.380886 3.4:-98862858 MS.gene014323:CDS
GATGATGAATTCTTGATTAT+GGG 0.388378 3.4:-98863107 MS.gene014323:CDS
TTATCTGTTTCACGTGCCTT+AGG 0.408033 3.4:-98863212 MS.gene014323:CDS
ATTGTATTTCAGAAAGACTA+AGG 0.408240 3.4:-98863283 MS.gene014323:CDS
AATCTTAAACCAACCACAAT+TGG 0.411304 3.4:-98865289 MS.gene014323:CDS
AATAAGATTTCCTGCAACTC+TGG 0.414668 3.4:+98863137 None:intergenic
TAGCTCCAATAGATTGAAAC+TGG 0.425800 3.4:-98865227 MS.gene014323:CDS
CAACTTCCTGATCGAAATAT+CGG 0.427335 3.4:+98864561 None:intergenic
AGTGTGGATGCAGAGGTTAC+TGG 0.429225 3.4:-98864621 MS.gene014323:CDS
TAACTCATGTGATAATTTAA+CGG 0.431939 3.4:-98862961 MS.gene014323:CDS
TGCTGTGACCATGGCAAGAA+AGG 0.436779 3.4:-98863048 MS.gene014323:CDS
TTTCACGTGCCTTAGGTGAC+TGG 0.440786 3.4:-98863205 MS.gene014323:CDS
CTCAAACTGGAAGCATGTCT+TGG 0.449022 3.4:+98865259 None:intergenic
AGATACCTCCTTCTCGAGTC+AGG 0.452138 3.4:-98862896 MS.gene014323:CDS
AACTCTCTCGAACACCTTTG+AGG 0.459406 3.4:+98863005 None:intergenic
CCTCCAATTACAATACTAGA+AGG 0.459410 3.4:-98865367 MS.gene014323:CDS
CAAAGGACAGGCAGAACCCT+TGG 0.469942 3.4:+98863169 None:intergenic
AGAAGGAGGTATCTCTATCC+TGG 0.471146 3.4:+98862905 None:intergenic
ATACACCCTTAAGTAAAGTA+AGG 0.471953 3.4:+98862853 None:intergenic
AGAGGAGATATCAAGCGAAC+TGG 0.473514 3.4:+98863772 None:intergenic
CCATAGAAAGCTCCGGGAAG+AGG 0.477635 3.4:+98864450 None:intergenic
GCTAAGGCTATGTCTCAAAC+TGG 0.485089 3.4:+98865246 None:intergenic
GTTCAGGTGTTTGATGGCCA+TGG 0.485255 3.4:-98863926 MS.gene014323:intron
TTCTTGATTATGGGCTGTGA+TGG 0.488636 3.4:-98863098 MS.gene014323:CDS
AGTTCGCTTGATATCTCCTC+TGG 0.489115 3.4:-98863770 MS.gene014323:CDS
CTATCCTGGAAGGAGGATCT+GGG 0.492994 3.4:+98862919 None:intergenic
AAACTGGAAGCATGTCTTGG+AGG 0.497115 3.4:+98865262 None:intergenic
AACATGGTAATTGCAAATGC+GGG 0.500584 3.4:-98863371 MS.gene014323:CDS
TCTTGGAGGTTTACCAATTG+TGG 0.502037 3.4:+98865276 None:intergenic
CCTTCTAGTATTGTAATTGG+AGG 0.506725 3.4:+98865367 None:intergenic
TCTCAGTTTCCAACTTGTGT+GGG 0.508801 3.4:-98863845 MS.gene014323:CDS
GTTTCCAACTTGTGTGGGGA+AGG 0.512554 3.4:-98863840 MS.gene014323:CDS
CTCTCAGTTTCCAACTTGTG+TGG 0.515279 3.4:-98863846 MS.gene014323:CDS
GGAGGTTTACCAATTGTGGT+TGG 0.517867 3.4:+98865280 None:intergenic
TGATAATTTAACGGTTATTG+TGG 0.519496 3.4:-98862952 MS.gene014323:CDS
GTTTCAATCTATTGGAGCTA+AGG 0.520235 3.4:+98865230 None:intergenic
CATCAACTCCTTTCTTGCCA+TGG 0.520543 3.4:+98863040 None:intergenic
ACGAACCCCATAGAAAGCTC+CGG 0.522866 3.4:+98864443 None:intergenic
ATTGCCTTCCCCACACAAGT+TGG 0.523655 3.4:+98863836 None:intergenic
TTTGTTCCGATATTTCGATC+AGG 0.526490 3.4:-98864567 MS.gene014323:CDS
CTTAGGTGACTGGCACATGA+AGG 0.537656 3.4:-98863195 MS.gene014323:CDS
CTTGGTGGGGTGGTATATGA+TGG 0.541375 3.4:-98863251 MS.gene014323:CDS
TTGCCATGGTCACAGCACCT+TGG 0.547224 3.4:+98863054 None:intergenic
AAAGGACAGGCAGAACCCTT+GGG 0.548931 3.4:+98863170 None:intergenic
GGGGATTGTCGAGCTGTACT+GGG 0.549473 3.4:-98863350 MS.gene014323:CDS
TCTTACAAACAAAGCAGCAT+CGG 0.551613 3.4:+98863898 None:intergenic
GATTTCCTGCAACTCTGGCT+CGG 0.555836 3.4:+98863142 None:intergenic
AACTCTGGCTCGGCACTCAA+AGG 0.558498 3.4:+98863152 None:intergenic
CTTCATGTGCCAGTCACCTA+AGG 0.565352 3.4:+98863196 None:intergenic
CTGGCACATGAAGGGTCCCA+AGG 0.566388 3.4:-98863186 MS.gene014323:CDS
CGAGCTGTACTGGGAAGGCG+AGG 0.567777 3.4:-98863341 MS.gene014323:CDS
TCAGGAAGTTGTGCTGAAAG+AGG 0.568890 3.4:-98864549 MS.gene014323:CDS
CTCAGTTTCCAACTTGTGTG+GGG 0.570395 3.4:-98863844 MS.gene014323:CDS
CGAACCCCATAGAAAGCTCC+GGG 0.570787 3.4:+98864444 None:intergenic
AATCAAGAATTCATCATCCT+CGG 0.573522 3.4:+98863112 None:intergenic
TTAGGTGACTGGCACATGAA+GGG 0.574484 3.4:-98863194 MS.gene014323:CDS
TCAAAGGTGTTCGAGAGAGT+TGG 0.583518 3.4:-98863003 MS.gene014323:CDS
TTATGGGCTGTGATGGCCTG+TGG 0.583612 3.4:-98863091 MS.gene014323:CDS
TGGCTCGGCACTCAAAGGAC+AGG 0.584284 3.4:+98863157 None:intergenic
GAACATGGTAATTGCAAATG+CGG 0.589776 3.4:-98863372 MS.gene014323:CDS
GTATATGATGGATACTTGAA+TGG 0.591854 3.4:-98863239 MS.gene014323:CDS
TTTCATCATTGACAGGAACA+TGG 0.594549 3.4:-98863387 MS.gene014323:intron
TATGGGCTGTGATGGCCTGT+GGG 0.595224 3.4:-98863090 MS.gene014323:CDS
AAGCAGCATCGGTTCCTCCA+TGG 0.595456 3.4:+98863909 None:intergenic
ATACTCCTCCTGACTCGAGA+AGG 0.595732 3.4:+98862888 None:intergenic
TAACCAAGGTGCTGTGACCA+TGG 0.601204 3.4:-98863057 MS.gene014323:CDS
TAACTGCACTTGTATTTGGG+AGG 0.603179 3.4:-98863736 MS.gene014323:intron
TGGCACATGAAGGGTCCCAA+GGG 0.607482 3.4:-98863185 MS.gene014323:CDS
ATTGTCGAGCTGTACTGGGA+AGG 0.608398 3.4:-98863346 MS.gene014323:CDS
CATCCTTAAACTCATTGTTG+AGG 0.608747 3.4:-98863870 MS.gene014323:CDS
GGTTACTCATTACATCCCAC+AGG 0.609793 3.4:+98863075 None:intergenic
TTCGAGAGAGTTGGTCAGAG+AGG 0.616595 3.4:-98862994 MS.gene014323:CDS
TACAAGTGCAGTTAAAGCGG+TGG 0.621319 3.4:+98863745 None:intergenic
GATGATCTTACTCAACACAT+AGG 0.621620 3.4:-98864489 MS.gene014323:CDS
CTCCTCCTGACTCGAGAAGG+AGG 0.623337 3.4:+98862891 None:intergenic
GGAGGTATCTCTATCCTGGA+AGG 0.623574 3.4:+98862909 None:intergenic
AGTTAAAGCGGTGGTGCCAG+AGG 0.623929 3.4:+98863754 None:intergenic
ACATGGTAATTGCAAATGCG+GGG 0.624191 3.4:-98863370 MS.gene014323:CDS
TGATACATAATGATCCTCAA+AGG 0.634106 3.4:-98863019 MS.gene014323:CDS
AAATACAAGTGCAGTTAAAG+CGG 0.641797 3.4:+98863742 None:intergenic
GGAAGAGATTGTAATGCATG+TGG 0.649641 3.4:-98865404 None:intergenic
GAGCTGTACTGGGAAGGCGA+GGG 0.651369 3.4:-98863340 MS.gene014323:CDS
TACCTCCTTCTCGAGTCAGG+AGG 0.654982 3.4:-98862893 MS.gene014323:CDS
CATGGTAATTGCAAATGCGG+GGG 0.660694 3.4:-98863369 MS.gene014323:CDS
GCAGGAAATCTTATTGACCG+AGG 0.667282 3.4:-98863129 MS.gene014323:CDS
TATCCTGGAAGGAGGATCTG+GGG 0.673089 3.4:+98862920 None:intergenic
GGTATCTCTATCCTGGAAGG+AGG 0.683404 3.4:+98862912 None:intergenic
CAGGTGTTTGATGGCCATGG+AGG 0.686582 3.4:-98863923 MS.gene014323:CDS
TCTTCCCGGAGCTTTCTATG+GGG 0.694705 3.4:-98864448 MS.gene014323:intron
TGGGATGTAATGAGTAACCA+AGG 0.735826 3.4:-98863071 MS.gene014323:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATATTTTGACATTT+TGG - chr3.4:98863108-98863127 MS.gene014323:CDS 10.0%
!!! CATAAAATATATTGTTTTAA+TGG - chr3.4:98864195-98864214 MS.gene014323:intron 10.0%
!! AAAATTAATGAAAAGAATCA+TGG + chr3.4:98864544-98864563 None:intergenic 15.0%
!! AATGTTTGGAAACAATATAA+TGG - chr3.4:98864651-98864670 MS.gene014323:intron 20.0%
!! AGTAAAGTATAAAGTAGTAT+TGG + chr3.4:98863520-98863539 None:intergenic 20.0%
!! GATGAAATTTCACAAATTTA+GGG + chr3.4:98864833-98864852 None:intergenic 20.0%
!! TAACATGCAAACAAAAATAA+AGG + chr3.4:98864254-98864273 None:intergenic 20.0%
!! TAACTCATGTGATAATTTAA+CGG - chr3.4:98865272-98865291 MS.gene014323:CDS 20.0%
!! TGATGAAATTTCACAAATTT+AGG + chr3.4:98864834-98864853 None:intergenic 20.0%
!! TTTGGTTAAGGAATAAAAAA+AGG - chr3.4:98863277-98863296 MS.gene014323:CDS 20.0%
!!! AGATCCTATTATTTTTAAGT+GGG - chr3.4:98864605-98864624 MS.gene014323:CDS 20.0%
!!! CATTAATTTTAGCAAGTTTT+AGG - chr3.4:98864554-98864573 MS.gene014323:CDS 20.0%
!!! TAAGATAAACTTTCCTTTTA+TGG - chr3.4:98863347-98863366 MS.gene014323:CDS 20.0%
!!! TAGATCCTATTATTTTTAAG+TGG - chr3.4:98864604-98864623 MS.gene014323:CDS 20.0%
! AAACAACCAATAAAATCTGA+AGG + chr3.4:98864582-98864601 None:intergenic 25.0%
! AACACCCACTTAAAAATAAT+AGG + chr3.4:98864612-98864631 None:intergenic 25.0%
! ATTGTATTTCAGAAAGACTA+AGG - chr3.4:98864950-98864969 MS.gene014323:intron 25.0%
! CATTTGTTTACTTTGCTTAA+AGG - chr3.4:98863924-98863943 MS.gene014323:intron 25.0%
! CTAACTAGTAATCTAAACAT+TGG + chr3.4:98863382-98863401 None:intergenic 25.0%
! GATGATGAATTCTTGATTAT+GGG - chr3.4:98865126-98865145 MS.gene014323:intron 25.0%
! TAAAAAAAGGCAAGTTTGTA+TGG - chr3.4:98863290-98863309 MS.gene014323:CDS 25.0%
! TCATCTTCCATATATTGTTT+AGG + chr3.4:98863711-98863730 None:intergenic 25.0%
! TGATAATTTAACGGTTATTG+TGG - chr3.4:98865281-98865300 MS.gene014323:CDS 25.0%
! TTCTGATGGAAATTAAACAT+CGG + chr3.4:98864109-98864128 None:intergenic 25.0%
! TTGGTTAATGAATCCATAAA+AGG + chr3.4:98863363-98863382 None:intergenic 25.0%
!! GATAATGATGATGACAAATT+AGG - chr3.4:98862911-98862930 MS.gene014323:CDS 25.0%
!! TTTTATTCCTTAACCAAATG+TGG + chr3.4:98863275-98863294 None:intergenic 25.0%
!!! AGTCTTTCTGAAATACAATT+TGG + chr3.4:98864949-98864968 None:intergenic 25.0%
AAATACAAGTGCAGTTAAAG+CGG + chr3.4:98864494-98864513 None:intergenic 30.0%
AAGAGGACCTAAACAATATA+TGG - chr3.4:98863701-98863720 MS.gene014323:intron 30.0%
AATCAAGAATTCATCATCCT+CGG + chr3.4:98865124-98865143 None:intergenic 30.0%
AATCATGGAATCATAATGCA+AGG + chr3.4:98864529-98864548 None:intergenic 30.0%
AATCTTAAACCAACCACAAT+TGG - chr3.4:98862944-98862963 MS.gene014323:CDS 30.0%
AGAAAGCCTTACTTTACTTA+AGG - chr3.4:98865374-98865393 MS.gene014323:CDS 30.0%
AGACTAAGGATTGAAAAACT+TGG - chr3.4:98864964-98864983 MS.gene014323:intron 30.0%
ATACACCCTTAAGTAAAGTA+AGG + chr3.4:98865383-98865402 None:intergenic 30.0%
CATGCAAACAAAAATAAAGG+TGG + chr3.4:98864251-98864270 None:intergenic 30.0%
CTGTTAAGAATAGTAATGCA+TGG + chr3.4:98864078-98864097 None:intergenic 30.0%
CTTTAACTGCACTTGTATTT+GGG - chr3.4:98864494-98864513 MS.gene014323:CDS 30.0%
GAAAGCCTTACTTTACTTAA+GGG - chr3.4:98865375-98865394 MS.gene014323:CDS 30.0%
GATTAGGACAAATGAGTAAT+AGG - chr3.4:98864144-98864163 MS.gene014323:intron 30.0%
GGATGATGAATTCTTGATTA+TGG - chr3.4:98865125-98865144 MS.gene014323:intron 30.0%
GTATTTATGTCTCATCTCAT+TGG - chr3.4:98864727-98864746 MS.gene014323:intron 30.0%
TAAGGATTGAAAAACTTGGT+GGG - chr3.4:98864968-98864987 MS.gene014323:intron 30.0%
TACAACGAATATGACAACAT+AGG + chr3.4:98863544-98863563 None:intergenic 30.0%
TACTATTCTTAACAGAATCG+TGG - chr3.4:98864083-98864102 MS.gene014323:intron 30.0%
TCATATTCGTTGTAAAGCTT+AGG - chr3.4:98863550-98863569 MS.gene014323:intron 30.0%
TGATACATAATGATCCTCAA+AGG - chr3.4:98865214-98865233 MS.gene014323:CDS 30.0%
TGTGAAATTTCATCATTGAC+AGG - chr3.4:98864839-98864858 MS.gene014323:intron 30.0%
TTCTTCAACCGTAATTTATC+CGG - chr3.4:98864681-98864700 MS.gene014323:intron 30.0%
! CTGAAATACAATTTGGTTTC+TGG + chr3.4:98864942-98864961 None:intergenic 30.0%
! TGTTTTTCCCGGATAAATTA+CGG + chr3.4:98864692-98864711 None:intergenic 30.0%
!! GTATATGATGGATACTTGAA+TGG - chr3.4:98864994-98865013 MS.gene014323:intron 30.0%
AAACACCTGAACAATGAGTA+TGG + chr3.4:98864299-98864318 None:intergenic 35.0%
AAATGAGTAATAGGCTAGAG+AGG - chr3.4:98864153-98864172 MS.gene014323:intron 35.0%
AACACCTGAACAATGAGTAT+GGG + chr3.4:98864298-98864317 None:intergenic 35.0%
AACATGGTAATTGCAAATGC+GGG - chr3.4:98864862-98864881 MS.gene014323:intron 35.0%
AATAAGATTTCCTGCAACTC+TGG + chr3.4:98865099-98865118 None:intergenic 35.0%
AATAGTAATGCATGGAGAAG+AGG + chr3.4:98864070-98864089 None:intergenic 35.0%
ACAAGTTCCACATTTGGTTA+AGG - chr3.4:98863265-98863284 MS.gene014323:CDS 35.0%
AGTCCTCAACAATGAGTTTA+AGG + chr3.4:98864369-98864388 None:intergenic 35.0%
AGTTGACATTGCTGAAGATT+AGG - chr3.4:98864128-98864147 MS.gene014323:intron 35.0%
ATATGCAGTACGATCAATGA+TGG + chr3.4:98864006-98864025 None:intergenic 35.0%
ATGGGAAATACAAAGAGTAG+TGG + chr3.4:98863987-98864006 None:intergenic 35.0%
ATGTGTGTATCAGTTTAGCA+AGG + chr3.4:98863468-98863487 None:intergenic 35.0%
CAACTTCCTGATCGAAATAT+CGG + chr3.4:98863675-98863694 None:intergenic 35.0%
CAAGTAACAAGTTCCACATT+TGG - chr3.4:98863259-98863278 MS.gene014323:CDS 35.0%
CATCCTTAAACTCATTGTTG+AGG - chr3.4:98864363-98864382 MS.gene014323:intron 35.0%
CCTCCAATTACAATACTAGA+AGG - chr3.4:98862866-98862885 MS.gene014323:CDS 35.0%
CCTTCTAGTATTGTAATTGG+AGG + chr3.4:98862869-98862888 None:intergenic 35.0%
CGGGAAAAACATAAGATTCT+GGG - chr3.4:98864701-98864720 MS.gene014323:intron 35.0%
CTAAGGATTGAAAAACTTGG+TGG - chr3.4:98864967-98864986 MS.gene014323:intron 35.0%
GAACATGGTAATTGCAAATG+CGG - chr3.4:98864861-98864880 MS.gene014323:intron 35.0%
GATGATCTTACTCAACACAT+AGG - chr3.4:98863744-98863763 MS.gene014323:CDS 35.0%
GCTTTAACTGCACTTGTATT+TGG - chr3.4:98864493-98864512 MS.gene014323:CDS 35.0%
GTTTCAATCTATTGGAGCTA+AGG + chr3.4:98863006-98863025 None:intergenic 35.0%
TAGCTCCAATAGATTGAAAC+TGG - chr3.4:98863006-98863025 MS.gene014323:CDS 35.0%
TATGCAGTACGATCAATGAT+GGG + chr3.4:98864005-98864024 None:intergenic 35.0%
TCGCCTTCTAGTATTGTAAT+TGG + chr3.4:98862872-98862891 None:intergenic 35.0%
TCTTACAAACAAAGCAGCAT+CGG + chr3.4:98864338-98864357 None:intergenic 35.0%
TCTTCAACCGTAATTTATCC+GGG - chr3.4:98864682-98864701 MS.gene014323:intron 35.0%
TTTAAGTGGGTGTTAGAACA+CGG - chr3.4:98864618-98864637 MS.gene014323:CDS 35.0%
TTTCATCATTGACAGGAACA+TGG - chr3.4:98864846-98864865 MS.gene014323:intron 35.0%
TTTGTTCCGATATTTCGATC+AGG - chr3.4:98863666-98863685 MS.gene014323:intron 35.0%
! AAGGATTGAAAAACTTGGTG+GGG - chr3.4:98864969-98864988 MS.gene014323:intron 35.0%
! CCAGAATCTTATGTTTTTCC+CGG + chr3.4:98864703-98864722 None:intergenic 35.0%
! TAGGTGCCTTCAGATTTTAT+TGG - chr3.4:98864573-98864592 MS.gene014323:CDS 35.0%
!! CAAATGTGGAACTTGTTACT+TGG + chr3.4:98863261-98863280 None:intergenic 35.0%
!! CACAAAGCTTGTTATCTAAC+AGG + chr3.4:98863900-98863919 None:intergenic 35.0%
!!! CTCTCTCTTTTTTAAGAGTG+TGG - chr3.4:98863596-98863615 MS.gene014323:intron 35.0%
ACATGGTAATTGCAAATGCG+GGG - chr3.4:98864863-98864882 MS.gene014323:intron 40.0%
ACTTCAAATGTTCCTCTTCC+CGG - chr3.4:98863771-98863790 MS.gene014323:CDS 40.0%
AGGCACGTGAAACAGATAAT+TGG + chr3.4:98865020-98865039 None:intergenic 40.0%
ATGTCTCATCTCATTGGAGA+TGG - chr3.4:98864733-98864752 MS.gene014323:intron 40.0%
CCGGGAAAAACATAAGATTC+TGG - chr3.4:98864700-98864719 MS.gene014323:intron 40.0%
CTCATTGTTCAGGTGTTTGA+TGG - chr3.4:98864301-98864320 MS.gene014323:intron 40.0%
GTAACCCATACTCATTGTTC+AGG - chr3.4:98864291-98864310 MS.gene014323:intron 40.0%
GTTTCCAAACATTGACAGAG+CGG + chr3.4:98864644-98864663 None:intergenic 40.0%
TAACTGCACTTGTATTTGGG+AGG - chr3.4:98864497-98864516 MS.gene014323:CDS 40.0%
TCAGCAATGTCAACTTCTGA+TGG + chr3.4:98864123-98864142 None:intergenic 40.0%
TCTCAGTTTCCAACTTGTGT+GGG - chr3.4:98864388-98864407 MS.gene014323:intron 40.0%
TCTTGGAGGTTTACCAATTG+TGG + chr3.4:98862960-98862979 None:intergenic 40.0%
TGCAGCCAGTTTCAATCTAT+TGG + chr3.4:98863014-98863033 None:intergenic 40.0%
TGGGATGTAATGAGTAACCA+AGG - chr3.4:98865162-98865181 MS.gene014323:intron 40.0%
TTATCTGTTTCACGTGCCTT+AGG - chr3.4:98865021-98865040 MS.gene014323:intron 40.0%
! AGTATGGGTTACTGAACTGT+TGG + chr3.4:98864283-98864302 None:intergenic 40.0%
! TTCTTGATTATGGGCTGTGA+TGG - chr3.4:98865135-98865154 MS.gene014323:intron 40.0%
!! GCTTGTTATCTAACAGGTAC+AGG + chr3.4:98863894-98863913 None:intergenic 40.0%
!! TTTTAAGAGTGTGGATGCAG+AGG - chr3.4:98863605-98863624 MS.gene014323:intron 40.0%
AAAGGGGAAGAAACTCTGCT+AGG + chr3.4:98864034-98864053 None:intergenic 45.0%
AACTCTCTCGAACACCTTTG+AGG + chr3.4:98865231-98865250 None:intergenic 45.0%
AAGGGGAAGAAACTCTGCTA+GGG + chr3.4:98864033-98864052 None:intergenic 45.0%
AGAGGAGATATCAAGCGAAC+TGG + chr3.4:98864464-98864483 None:intergenic 45.0%
AGTTCGCTTGATATCTCCTC+TGG - chr3.4:98864463-98864482 MS.gene014323:CDS 45.0%
CATCAACTCCTTTCTTGCCA+TGG + chr3.4:98865196-98865215 None:intergenic 45.0%
CATGGTAATTGCAAATGCGG+GGG - chr3.4:98864864-98864883 MS.gene014323:intron 45.0%
CTCAGTTTCCAACTTGTGTG+GGG - chr3.4:98864389-98864408 MS.gene014323:intron 45.0%
CTCTCAGTTTCCAACTTGTG+TGG - chr3.4:98864387-98864406 MS.gene014323:intron 45.0%
GAAACTGGCTGCATCAGATT+TGG - chr3.4:98863021-98863040 MS.gene014323:CDS 45.0%
GCAGGAAATCTTATTGACCG+AGG - chr3.4:98865104-98865123 MS.gene014323:intron 45.0%
GCTAAGGCTATGTCTCAAAC+TGG + chr3.4:98862990-98863009 None:intergenic 45.0%
GGAGGTTTACCAATTGTGGT+TGG + chr3.4:98862956-98862975 None:intergenic 45.0%
GGTTACTCATTACATCCCAC+AGG + chr3.4:98865161-98865180 None:intergenic 45.0%
TACAAGTGCAGTTAAAGCGG+TGG + chr3.4:98864491-98864510 None:intergenic 45.0%
TCAGGAAGTTGTGCTGAAAG+AGG - chr3.4:98863684-98863703 MS.gene014323:intron 45.0%
TTAGGTGACTGGCACATGAA+GGG - chr3.4:98865039-98865058 MS.gene014323:intron 45.0%
! AAACTGGAAGCATGTCTTGG+AGG + chr3.4:98862974-98862993 None:intergenic 45.0%
! CTCAAACTGGAAGCATGTCT+TGG + chr3.4:98862977-98862996 None:intergenic 45.0%
! GATTGAAAAACTTGGTGGGG+TGG - chr3.4:98864972-98864991 MS.gene014323:intron 45.0%
!! AGAAGGAGGTATCTCTATCC+TGG + chr3.4:98865331-98865350 None:intergenic 45.0%
!! TCAAAGGTGTTCGAGAGAGT+TGG - chr3.4:98865230-98865249 MS.gene014323:CDS 45.0%
AAAGGACAGGCAGAACCCTT+GGG + chr3.4:98865066-98865085 None:intergenic 50.0%
ACGAACCCCATAGAAAGCTC+CGG + chr3.4:98863793-98863812 None:intergenic 50.0%
AGAGGCGAAAGAGGGAACAA+AGG + chr3.4:98864052-98864071 None:intergenic 50.0%
AGATACCTCCTTCTCGAGTC+AGG - chr3.4:98865337-98865356 MS.gene014323:CDS 50.0%
AGGCGAAAGAGGGAACAAAG+GGG + chr3.4:98864050-98864069 None:intergenic 50.0%
AGTGTGGATGCAGAGGTTAC+TGG - chr3.4:98863612-98863631 MS.gene014323:intron 50.0%
ATTGCCTTCCCCACACAAGT+TGG + chr3.4:98864400-98864419 None:intergenic 50.0%
ATTGTCGAGCTGTACTGGGA+AGG - chr3.4:98864887-98864906 MS.gene014323:intron 50.0%
CATGGAGAAGAGGCGAAAGA+GGG + chr3.4:98864060-98864079 None:intergenic 50.0%
CTATCCTGGAAGGAGGATCT+GGG + chr3.4:98865317-98865336 None:intergenic 50.0%
CTCTTCCCGGAGCTTTCTAT+GGG - chr3.4:98863784-98863803 MS.gene014323:CDS 50.0%
CTTAGGTGACTGGCACATGA+AGG - chr3.4:98865038-98865057 MS.gene014323:intron 50.0%
CTTCATGTGCCAGTCACCTA+AGG + chr3.4:98865040-98865059 None:intergenic 50.0%
CTTGGTGGGGTGGTATATGA+TGG - chr3.4:98864982-98865001 MS.gene014323:intron 50.0%
GAGATGGAAGAGAGAAGCTG+CGG - chr3.4:98864749-98864768 MS.gene014323:intron 50.0%
GAGGCGAAAGAGGGAACAAA+GGG + chr3.4:98864051-98864070 None:intergenic 50.0%
GATTTCCTGCAACTCTGGCT+CGG + chr3.4:98865094-98865113 None:intergenic 50.0%
GGTATCTCTATCCTGGAAGG+AGG + chr3.4:98865324-98865343 None:intergenic 50.0%
GTTTCCAACTTGTGTGGGGA+AGG - chr3.4:98864393-98864412 MS.gene014323:intron 50.0%
TATCCTGGAAGGAGGATCTG+GGG + chr3.4:98865316-98865335 None:intergenic 50.0%
TCTATCCTGGAAGGAGGATC+TGG + chr3.4:98865318-98865337 None:intergenic 50.0%
TCTTCCCGGAGCTTTCTATG+GGG - chr3.4:98863785-98863804 MS.gene014323:CDS 50.0%
TGCTGTGACCATGGCAAGAA+AGG - chr3.4:98865185-98865204 MS.gene014323:intron 50.0%
TTTCACGTGCCTTAGGTGAC+TGG - chr3.4:98865028-98865047 MS.gene014323:intron 50.0%
! ATACTCCTCCTGACTCGAGA+AGG + chr3.4:98865348-98865367 None:intergenic 50.0%
! GTTCAGGTGTTTGATGGCCA+TGG - chr3.4:98864307-98864326 MS.gene014323:intron 50.0%
! TTCGAGAGAGTTGGTCAGAG+AGG - chr3.4:98865239-98865258 MS.gene014323:CDS 50.0%
!! GGAGGTATCTCTATCCTGGA+AGG + chr3.4:98865327-98865346 None:intergenic 50.0%
!! TAACCAAGGTGCTGTGACCA+TGG - chr3.4:98865176-98865195 MS.gene014323:intron 50.0%
ACGGCCGCTCTGTCAATGTT+TGG - chr3.4:98864637-98864656 MS.gene014323:intron 55.0%
CAAAGGACAGGCAGAACCCT+TGG + chr3.4:98865067-98865086 None:intergenic 55.0%
CCATAGAAAGCTCCGGGAAG+AGG + chr3.4:98863786-98863805 None:intergenic 55.0%
CCTCTTCCCGGAGCTTTCTA+TGG - chr3.4:98863783-98863802 MS.gene014323:CDS 55.0%
CGAACCCCATAGAAAGCTCC+GGG + chr3.4:98863792-98863811 None:intergenic 55.0%
GCATGGAGAAGAGGCGAAAG+AGG + chr3.4:98864061-98864080 None:intergenic 55.0%
GGGGATTGTCGAGCTGTACT+GGG - chr3.4:98864883-98864902 MS.gene014323:intron 55.0%
TACCTCCTTCTCGAGTCAGG+AGG - chr3.4:98865340-98865359 MS.gene014323:CDS 55.0%
TGGCACATGAAGGGTCCCAA+GGG - chr3.4:98865048-98865067 MS.gene014323:intron 55.0%
TTGCCATGGTCACAGCACCT+TGG + chr3.4:98865182-98865201 None:intergenic 55.0%
! AGTTAAAGCGGTGGTGCCAG+AGG + chr3.4:98864482-98864501 None:intergenic 55.0%
! CAGGTGTTTGATGGCCATGG+AGG - chr3.4:98864310-98864329 MS.gene014323:intron 55.0%
! TATGGGCTGTGATGGCCTGT+GGG - chr3.4:98865143-98865162 MS.gene014323:intron 55.0%
! TTATGGGCTGTGATGGCCTG+TGG - chr3.4:98865142-98865161 MS.gene014323:intron 55.0%
!! AACTCTGGCTCGGCACTCAA+AGG + chr3.4:98865084-98865103 None:intergenic 55.0%
!! AAGCAGCATCGGTTCCTCCA+TGG + chr3.4:98864327-98864346 None:intergenic 55.0%
CTGGCACATGAAGGGTCCCA+AGG - chr3.4:98865047-98865066 MS.gene014323:intron 60.0%
GAGCTGTACTGGGAAGGCGA+GGG - chr3.4:98864893-98864912 MS.gene014323:intron 60.0%
GGGGGATTGTCGAGCTGTAC+TGG - chr3.4:98864882-98864901 MS.gene014323:intron 60.0%
TCTCCCCAGATCCTCCTTCC+AGG - chr3.4:98865310-98865329 MS.gene014323:CDS 60.0%
! CTCCTCCTGACTCGAGAAGG+AGG + chr3.4:98865345-98865364 None:intergenic 60.0%
! TGGCTCGGCACTCAAAGGAC+AGG + chr3.4:98865079-98865098 None:intergenic 60.0%
CGAGCTGTACTGGGAAGGCG+AGG - chr3.4:98864892-98864911 MS.gene014323:intron 65.0%
!! GAGTGCCGAGCCAGAGTTGC+AGG - chr3.4:98865086-98865105 MS.gene014323:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 98862842 98865413 98862842 ID=MS.gene014323
chr3.4 mRNA 98862842 98865413 98862842 ID=MS.gene014323.t1;Parent=MS.gene014323
chr3.4 exon 98865213 98865413 98865213 ID=MS.gene014323.t1.exon1;Parent=MS.gene014323.t1
chr3.4 CDS 98865213 98865413 98865213 ID=cds.MS.gene014323.t1;Parent=MS.gene014323.t1
chr3.4 exon 98864449 98864643 98864449 ID=MS.gene014323.t1.exon2;Parent=MS.gene014323.t1
chr3.4 CDS 98864449 98864643 98864449 ID=cds.MS.gene014323.t1;Parent=MS.gene014323.t1
chr3.4 exon 98863737 98863942 98863737 ID=MS.gene014323.t1.exon3;Parent=MS.gene014323.t1
chr3.4 CDS 98863737 98863942 98863737 ID=cds.MS.gene014323.t1;Parent=MS.gene014323.t1
chr3.4 exon 98862842 98863394 98862842 ID=MS.gene014323.t1.exon4;Parent=MS.gene014323.t1
chr3.4 CDS 98862842 98863394 98862842 ID=cds.MS.gene014323.t1;Parent=MS.gene014323.t1
Gene Sequence

>MS.gene014323

ATGCATGTGGATATGGATTATTCTCCTCCAATTACAATACTAGAAGGCGATGATTACAACAAAGACAATGATAATGATGATGACAAATTAGGAGATTTCAATAATCTTAAACCAACCACAATTGGTAAACCTCCAAGACATGCTTCCAGTTTGAGACATAGCCTTAGCTCCAATAGATTGAAACTGGCTGCATCAGATTTGGTATGTTATTCAACTTTTTCATAAACTTTGATTTTTTTGCTAATATTTTTTTTTTTTTTTGTAATAATTATATATTTTGACATTTTGGTTCATGTCATGTTTTGTGTCTTTGTTGTTCTTACTTTGTAGTATTAATTTCTTTTGTTGCTTTGCTTGCTATAATTTTCAGATAATTTTAAATTTTCGTTTATGTTTTTATTACAAAGAAAATGCTACCAAGTAACAAGTTCCACATTTGGTTAAGGAATAAAAAAAGGCAAGTTTGTATGGAAGATGATGTATTTATTACATTAACTTGTATTGTTAAGATAAACTTTCCTTTTATGGATTCATTAACCAATGTTTAGATTACTAGTTAGCAAGATACTGCTTGTTAGTTTTTTTTAGCAAGCTTTAATGCTCTTGTTAGTCTTCATAATTCACCTTGCTAAACTGATACACACATAAATGCTGTGAACTTCATTTCAATTTTTACCAATACTACTTTATACTTTACTTCCTATGTTGTCATATTCGTTGTAAAGCTTAGGTTATCTGATTTGTCTGTTTCTCTCTCTCTCTTTTTTAAGAGTGTGGATGCAGAGGTTACTGGAAGTAAGTCATCTTCTGAAAACAAGACAGATTTTGTTCCGATATTTCGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACGTATGTATAGATGATCTTACTCAACACATAGGTTCTACTTCAAATGTTCCTCTTCCCGGAGCTTTCTATGGGGTTCGTATGTTATTCTTACTCGAGATTACAGTTTATATACATTTGATATGATATAAAGCTTCATATTTACATTCACATGTTGAACCTGTACCTGTTAGATAACAAGCTTTGTGTTTTCATTTGTTTACTTTGCTTAAAGGTAGTTTAGTCTTTTGTTACTTTTTGTTCATACATTTACCACTACTCTTTGTATTTCCCATCATTGATCGTACTGCATATTGTACCCTAGCAGAGTTTCTTCCCCTTTGTTCCCTCTTTCGCCTCTTCTCCATGCATTACTATTCTTAACAGAATCGTGGCCGATGTTTAATTTCCATCAGAAGTTGACATTGCTGAAGATTAGGACAAATGAGTAATAGGCTAGAGAGGTCTTTACTTTTGATATTTTCATAAAATATATTGTTTTAATGGATTGAAGTTTGTTGCTCATACAATGAGTTTCCACCTTTATTTTTGTTTGCATGTTAAAAAATCCAACAGTTCAGTAACCCATACTCATTGTTCAGGTGTTTGATGGCCATGGAGGAACCGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAAACTCATTGTTGAGGACTCTCAGTTTCCAACTTGTGTGGGGAAGGCAATTACAAGTGCGTTTATGAAAGCTGATTATACATTTGCAGATTCCAGTTCGCTTGATATCTCCTCTGGCACCACCGCTTTAACTGCACTTGTATTTGGGAGGTAATGACCTTGCATTATGATTCCATGATTCTTTTCATTAATTTTAGCAAGTTTTAGGTGCCTTCAGATTTTATTGGTTGTTTGTTAGATCCTATTATTTTTAAGTGGGTGTTAGAACACGGCCGCTCTGTCAATGTTTGGAAACAATATAATGGCATTTGCTTCTTCAACCGTAATTTATCCGGGAAAAACATAAGATTCTGGGATAGTATTTATGTCTCATCTCATTGGAGATGGAAGAGAGAAGCTGCGGAAAGAAAACTTATATGCATTGTGTTCTCTGTTGTTGCATGATTTCTTATGAGCTCTCTCCCTAAATTTGTGAAATTTCATCATTGACAGGAACATGGTAATTGCAAATGCGGGGGATTGTCGAGCTGTACTGGGAAGGCGAGGGAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGTATTTCAGAAAGACTAAGGATTGAAAAACTTGGTGGGGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCACGTGCCTTAGGTGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCTTTGAGTGCCGAGCCAGAGTTGCAGGAAATCTTATTGACCGAGGATGATGAATTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAAGGTGCTGTGACCATGGCAAGAAAGGAGTTGATGATACATAATGATCCTCAAAGGTGTTCGAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCATGTGATAATTTAACGGTTATTGTGGTATGTTTCTCCCCAGATCCTCCTTCCAGGATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGCCTTACTTTACTTAAGGGTGTATTAGAGTGTTAG
Protein sequence

>MS.gene014323.t1

MHVDMDYSPPITILEGDDYNKDNDNDDDKLGDFNNLKPTTIGKPPRHASSLRHSLSSNRLKLAASDLSVDAEVTGSKSSSENKTDFVPIFRSGSCAERGPKQYMEDEHVCIDDLTQHIGSTSNVPLPGAFYGVFDGHGGTDAALFVRNNILKLIVEDSQFPTCVGKAITSAFMKADYTFADSSSLDISSGTTALTALVFGRNMVIANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQGAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSPDPPSRIEIPPSRVRRSISAESLTLLKGVLEC