Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76824.t1 | XP_013469999.1 | 99.2 | 379 | 3 | 0 | 1 | 379 | 1 | 379 | 2.70E-212 | 747.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76824.t1 | O81760 | 70.7 | 379 | 109 | 2 | 1 | 378 | 1 | 378 | 4.8e-149 | 528.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76824.t1 | A0A072VQG3 | 99.2 | 379 | 3 | 0 | 1 | 379 | 1 | 379 | 2.0e-212 | 747.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050363 | MS.gene76824 | 0.823035 | 1.72E-53 | -1.69E-46 |
MS.gene050651 | MS.gene76824 | 0.818794 | 1.63E-52 | -1.69E-46 |
MS.gene060286 | MS.gene76824 | 0.934322 | 4.83E-96 | -1.69E-46 |
MS.gene060964 | MS.gene76824 | 0.801461 | 8.91E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene76824 | MS.gene014323 | PPI |
MS.gene76824 | MS.gene012148 | PPI |
MS.gene76824 | MS.gene017596 | PPI |
MS.gene76824 | MS.gene28884 | PPI |
MS.gene064433 | MS.gene76824 | PPI |
MS.gene76824 | MS.gene28886 | PPI |
MS.gene76824 | MS.gene50189 | PPI |
MS.gene76824 | MS.gene54188 | PPI |
MS.gene76824 | MS.gene009825 | PPI |
MS.gene76824 | MS.gene069997 | PPI |
MS.gene76824 | MS.gene57009 | PPI |
MS.gene76824 | MS.gene064860 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76824.t1 | MTR_1g106855 | 99.208 | 379 | 3 | 0 | 1 | 379 | 1 | 379 | 0.0 | 771 |
MS.gene76824.t1 | MTR_1g106855 | 98.966 | 290 | 3 | 0 | 1 | 290 | 1 | 290 | 0.0 | 592 |
MS.gene76824.t1 | MTR_1g116260 | 58.735 | 332 | 127 | 2 | 17 | 340 | 28 | 357 | 2.80e-138 | 399 |
MS.gene76824.t1 | MTR_1g112840 | 53.743 | 374 | 158 | 3 | 2 | 362 | 9 | 380 | 2.06e-137 | 397 |
MS.gene76824.t1 | MTR_7g081020 | 51.459 | 377 | 161 | 3 | 6 | 362 | 1 | 375 | 1.05e-134 | 390 |
MS.gene76824.t1 | MTR_8g074930 | 55.455 | 330 | 137 | 2 | 17 | 338 | 27 | 354 | 5.78e-130 | 378 |
MS.gene76824.t1 | MTR_0015s0140 | 54.969 | 322 | 142 | 1 | 18 | 339 | 36 | 354 | 6.19e-129 | 375 |
MS.gene76824.t1 | MTR_2g033910 | 53.538 | 325 | 148 | 2 | 16 | 339 | 30 | 352 | 1.69e-123 | 361 |
MS.gene76824.t1 | MTR_1g067210 | 55.183 | 328 | 137 | 2 | 20 | 339 | 27 | 352 | 2.64e-122 | 358 |
MS.gene76824.t1 | MTR_7g100240 | 54.683 | 331 | 140 | 2 | 16 | 338 | 18 | 346 | 2.81e-118 | 348 |
MS.gene76824.t1 | MTR_7g081020 | 50.492 | 305 | 129 | 3 | 6 | 290 | 1 | 303 | 2.41e-102 | 305 |
MS.gene76824.t1 | MTR_8g074930 | 53.704 | 270 | 123 | 1 | 95 | 364 | 1 | 268 | 6.53e-99 | 295 |
MS.gene76824.t1 | MTR_0015s0140 | 54.297 | 256 | 114 | 1 | 84 | 339 | 48 | 300 | 6.55e-98 | 295 |
MS.gene76824.t1 | MTR_3g032660 | 46.875 | 320 | 159 | 5 | 27 | 339 | 33 | 348 | 1.92e-93 | 286 |
MS.gene76824.t1 | MTR_3g032700 | 44.868 | 341 | 177 | 5 | 27 | 360 | 33 | 369 | 3.23e-93 | 286 |
MS.gene76824.t1 | MTR_7g090550 | 47.516 | 322 | 156 | 6 | 27 | 339 | 35 | 352 | 9.83e-90 | 277 |
MS.gene76824.t1 | MTR_7g090530 | 47.040 | 321 | 157 | 6 | 27 | 339 | 34 | 349 | 3.23e-86 | 268 |
MS.gene76824.t1 | MTR_3g032590 | 43.571 | 280 | 148 | 4 | 87 | 360 | 100 | 375 | 2.86e-69 | 224 |
MS.gene76824.t1 | MTR_4g113480 | 37.126 | 334 | 193 | 7 | 20 | 347 | 34 | 356 | 5.79e-62 | 208 |
MS.gene76824.t1 | MTR_4g113345 | 33.127 | 323 | 177 | 9 | 23 | 339 | 22 | 311 | 1.06e-45 | 160 |
MS.gene76824.t1 | MTR_7g090540 | 44.444 | 180 | 79 | 4 | 163 | 337 | 17 | 180 | 1.75e-38 | 139 |
MS.gene76824.t1 | MTR_7g060770 | 31.208 | 298 | 172 | 10 | 61 | 338 | 263 | 547 | 1.20e-36 | 140 |
MS.gene76824.t1 | MTR_4g113210 | 32.463 | 268 | 139 | 8 | 20 | 271 | 16 | 257 | 1.41e-36 | 134 |
MS.gene76824.t1 | MTR_4g119830 | 31.274 | 259 | 156 | 7 | 98 | 344 | 246 | 494 | 1.71e-31 | 125 |
MS.gene76824.t1 | MTR_4g076560 | 30.137 | 292 | 180 | 7 | 61 | 338 | 202 | 483 | 4.07e-31 | 124 |
MS.gene76824.t1 | MTR_1g085530 | 29.085 | 306 | 154 | 5 | 99 | 346 | 592 | 892 | 1.51e-30 | 124 |
MS.gene76824.t1 | MTR_4g063905 | 31.769 | 277 | 147 | 7 | 98 | 338 | 426 | 696 | 6.02e-29 | 119 |
MS.gene76824.t1 | MTR_4g098650 | 29.412 | 306 | 159 | 6 | 95 | 348 | 478 | 778 | 2.04e-28 | 117 |
MS.gene76824.t1 | MTR_3g464650 | 29.930 | 284 | 135 | 9 | 61 | 340 | 94 | 317 | 5.42e-26 | 106 |
MS.gene76824.t1 | MTR_1g115570 | 29.412 | 289 | 133 | 9 | 61 | 346 | 126 | 346 | 1.53e-24 | 103 |
MS.gene76824.t1 | MTR_3g464700 | 32.301 | 226 | 105 | 6 | 61 | 283 | 118 | 298 | 2.69e-24 | 102 |
MS.gene76824.t1 | MTR_5g071550 | 28.269 | 283 | 141 | 8 | 61 | 340 | 154 | 377 | 1.92e-23 | 100 |
MS.gene76824.t1 | MTR_1g014640 | 29.617 | 287 | 133 | 9 | 63 | 344 | 110 | 332 | 3.33e-21 | 93.6 |
MS.gene76824.t1 | MTR_1g013400 | 29.617 | 287 | 133 | 9 | 63 | 344 | 110 | 332 | 3.33e-21 | 93.6 |
MS.gene76824.t1 | MTR_3g068200 | 26.453 | 344 | 190 | 13 | 29 | 345 | 78 | 385 | 1.41e-20 | 92.8 |
MS.gene76824.t1 | MTR_4g125810 | 30.453 | 243 | 113 | 8 | 57 | 286 | 249 | 448 | 1.79e-20 | 93.2 |
MS.gene76824.t1 | MTR_3g091060 | 28.163 | 245 | 125 | 7 | 46 | 283 | 106 | 306 | 2.03e-20 | 92.0 |
MS.gene76824.t1 | MTR_3g104710 | 28.947 | 304 | 153 | 12 | 54 | 337 | 279 | 539 | 4.88e-20 | 92.0 |
MS.gene76824.t1 | MTR_3g105730 | 29.252 | 294 | 140 | 10 | 63 | 352 | 67 | 296 | 5.91e-20 | 89.7 |
MS.gene76824.t1 | MTR_3g105730 | 29.252 | 294 | 140 | 10 | 63 | 352 | 45 | 274 | 6.12e-20 | 89.0 |
MS.gene76824.t1 | MTR_5g071550 | 30.093 | 216 | 107 | 5 | 61 | 275 | 154 | 326 | 1.05e-19 | 89.7 |
MS.gene76824.t1 | MTR_1g086350 | 29.316 | 307 | 139 | 11 | 54 | 343 | 112 | 357 | 1.86e-19 | 89.4 |
MS.gene76824.t1 | MTR_1g086350 | 29.316 | 307 | 139 | 11 | 54 | 343 | 96 | 341 | 1.94e-19 | 89.4 |
MS.gene76824.t1 | MTR_2g033000 | 28.819 | 288 | 151 | 9 | 54 | 337 | 94 | 331 | 4.38e-19 | 88.2 |
MS.gene76824.t1 | MTR_5g024340 | 27.986 | 293 | 135 | 13 | 57 | 339 | 121 | 347 | 1.96e-17 | 83.2 |
MS.gene76824.t1 | MTR_1g086350 | 28.283 | 297 | 136 | 10 | 64 | 343 | 19 | 255 | 1.99e-17 | 82.0 |
MS.gene76824.t1 | MTR_4g094208 | 28.322 | 286 | 139 | 10 | 36 | 306 | 32 | 266 | 4.29e-17 | 80.9 |
MS.gene76824.t1 | MTR_3g105880 | 26.316 | 285 | 132 | 9 | 46 | 284 | 35 | 287 | 4.72e-17 | 81.6 |
MS.gene76824.t1 | MTR_4g007440 | 27.113 | 284 | 131 | 9 | 46 | 284 | 35 | 287 | 4.97e-17 | 82.0 |
MS.gene76824.t1 | MTR_3g105880 | 26.316 | 285 | 132 | 9 | 46 | 284 | 35 | 287 | 8.28e-17 | 81.3 |
MS.gene76824.t1 | MTR_5g080680 | 28.017 | 232 | 124 | 6 | 61 | 284 | 132 | 328 | 1.02e-16 | 81.3 |
MS.gene76824.t1 | MTR_4g123080 | 30.068 | 296 | 137 | 15 | 54 | 337 | 89 | 326 | 1.83e-16 | 80.5 |
MS.gene76824.t1 | MTR_4g123080 | 30.068 | 296 | 137 | 15 | 54 | 337 | 107 | 344 | 2.55e-16 | 80.1 |
MS.gene76824.t1 | MTR_2g078760 | 27.500 | 280 | 130 | 10 | 64 | 337 | 41 | 253 | 1.94e-15 | 75.9 |
MS.gene76824.t1 | MTR_2g078760 | 27.500 | 280 | 130 | 10 | 64 | 337 | 120 | 332 | 2.24e-15 | 76.6 |
MS.gene76824.t1 | MTR_1g014190 | 27.341 | 267 | 126 | 7 | 58 | 284 | 49 | 287 | 3.40e-15 | 76.6 |
MS.gene76824.t1 | MTR_1g014190 | 27.715 | 267 | 125 | 7 | 58 | 284 | 87 | 325 | 4.85e-15 | 76.3 |
MS.gene76824.t1 | MTR_7g093240 | 28.378 | 148 | 72 | 3 | 142 | 289 | 6 | 119 | 4.97e-15 | 71.6 |
MS.gene76824.t1 | MTR_5g063940 | 25.974 | 308 | 155 | 11 | 36 | 335 | 37 | 279 | 5.94e-15 | 74.7 |
MS.gene76824.t1 | MTR_1g050520 | 27.273 | 297 | 144 | 11 | 52 | 337 | 409 | 644 | 7.08e-15 | 76.6 |
MS.gene76824.t1 | MTR_1g028300 | 28.390 | 236 | 127 | 5 | 61 | 294 | 145 | 340 | 9.45e-15 | 75.5 |
MS.gene76824.t1 | MTR_2g008850 | 26.667 | 285 | 142 | 11 | 54 | 335 | 12 | 232 | 1.66e-14 | 72.8 |
MS.gene76824.t1 | MTR_4g094542 | 25.952 | 289 | 139 | 11 | 31 | 300 | 116 | 348 | 2.19e-14 | 74.3 |
MS.gene76824.t1 | MTR_2g008850 | 25.733 | 307 | 157 | 12 | 36 | 335 | 36 | 278 | 2.36e-14 | 73.2 |
MS.gene76824.t1 | MTR_8g463130 | 25.965 | 285 | 155 | 11 | 28 | 302 | 1 | 239 | 9.68e-14 | 70.9 |
MS.gene76824.t1 | MTR_8g463130 | 25.965 | 285 | 155 | 11 | 28 | 302 | 29 | 267 | 1.19e-13 | 71.2 |
MS.gene76824.t1 | MTR_5g063940 | 26.374 | 273 | 138 | 8 | 64 | 335 | 22 | 232 | 1.59e-13 | 70.1 |
MS.gene76824.t1 | MTR_3g491830 | 27.755 | 245 | 137 | 7 | 60 | 284 | 88 | 312 | 2.70e-13 | 70.9 |
MS.gene76824.t1 | MTR_3g074610 | 26.433 | 314 | 146 | 13 | 36 | 335 | 37 | 279 | 7.70e-13 | 68.6 |
MS.gene76824.t1 | MTR_4g037470 | 24.405 | 336 | 191 | 13 | 54 | 360 | 89 | 390 | 3.18e-12 | 68.2 |
MS.gene76824.t1 | MTR_4g037470 | 24.405 | 336 | 191 | 13 | 54 | 360 | 98 | 399 | 3.33e-12 | 68.2 |
MS.gene76824.t1 | MTR_8g102550 | 26.222 | 225 | 118 | 6 | 61 | 278 | 152 | 335 | 3.80e-12 | 67.8 |
MS.gene76824.t1 | MTR_6g081850 | 24.138 | 319 | 165 | 11 | 46 | 340 | 56 | 321 | 1.06e-11 | 65.9 |
MS.gene76824.t1 | MTR_2g435550 | 26.073 | 303 | 155 | 13 | 62 | 337 | 79 | 339 | 1.40e-11 | 65.5 |
MS.gene76824.t1 | MTR_2g435550 | 26.073 | 303 | 155 | 13 | 62 | 337 | 93 | 353 | 1.45e-11 | 65.5 |
MS.gene76824.t1 | MTR_7g021530 | 33.129 | 163 | 85 | 6 | 142 | 301 | 204 | 345 | 1.57e-11 | 65.9 |
MS.gene76824.t1 | MTR_7g021530 | 33.129 | 163 | 85 | 6 | 142 | 301 | 154 | 295 | 1.70e-11 | 65.5 |
MS.gene76824.t1 | MTR_7g021530 | 33.129 | 163 | 85 | 6 | 142 | 301 | 245 | 386 | 1.70e-11 | 65.9 |
MS.gene76824.t1 | MTR_7g112490 | 25.949 | 316 | 150 | 16 | 61 | 337 | 91 | 361 | 6.39e-11 | 63.5 |
MS.gene76824.t1 | MTR_7g112490 | 25.949 | 316 | 150 | 16 | 61 | 337 | 109 | 379 | 8.44e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76824.t1 | AT4G33920 | 70.712 | 379 | 109 | 2 | 1 | 378 | 1 | 378 | 0.0 | 549 |
MS.gene76824.t1 | AT4G33920 | 70.169 | 295 | 86 | 2 | 85 | 378 | 2 | 295 | 2.90e-147 | 419 |
MS.gene76824.t1 | AT3G51370 | 54.648 | 355 | 148 | 3 | 1 | 344 | 8 | 360 | 4.49e-140 | 404 |
MS.gene76824.t1 | AT3G51370 | 54.648 | 355 | 148 | 3 | 1 | 344 | 8 | 360 | 4.49e-140 | 404 |
MS.gene76824.t1 | AT5G66080 | 56.196 | 347 | 141 | 2 | 16 | 353 | 28 | 372 | 1.06e-139 | 403 |
MS.gene76824.t1 | AT3G12620 | 57.270 | 337 | 134 | 2 | 17 | 345 | 31 | 365 | 2.29e-135 | 392 |
MS.gene76824.t1 | AT3G12620 | 57.270 | 337 | 134 | 2 | 17 | 345 | 31 | 365 | 2.29e-135 | 392 |
MS.gene76824.t1 | AT4G33920 | 71.053 | 266 | 75 | 2 | 114 | 378 | 1 | 265 | 9.04e-134 | 383 |
MS.gene76824.t1 | AT3G55050 | 57.447 | 329 | 130 | 2 | 17 | 337 | 32 | 358 | 2.62e-133 | 387 |
MS.gene76824.t1 | AT3G55050 | 57.447 | 329 | 130 | 2 | 17 | 337 | 32 | 358 | 2.62e-133 | 387 |
MS.gene76824.t1 | AT4G38520 | 53.955 | 354 | 153 | 2 | 17 | 362 | 29 | 380 | 1.26e-131 | 383 |
MS.gene76824.t1 | AT4G38520 | 53.955 | 354 | 153 | 2 | 17 | 362 | 29 | 380 | 1.26e-131 | 383 |
MS.gene76824.t1 | AT5G06750 | 57.053 | 319 | 136 | 1 | 22 | 339 | 43 | 361 | 3.70e-129 | 376 |
MS.gene76824.t1 | AT5G06750 | 57.053 | 319 | 136 | 1 | 22 | 339 | 43 | 361 | 3.70e-129 | 376 |
MS.gene76824.t1 | AT3G17090 | 54.985 | 331 | 144 | 3 | 22 | 351 | 45 | 371 | 5.36e-128 | 373 |
MS.gene76824.t1 | AT5G02760 | 53.799 | 329 | 140 | 3 | 20 | 340 | 23 | 347 | 3.75e-117 | 345 |
MS.gene76824.t1 | AT3G51370 | 55.797 | 276 | 114 | 3 | 74 | 344 | 3 | 275 | 2.56e-109 | 322 |
MS.gene76824.t1 | AT5G66080 | 56.767 | 266 | 113 | 1 | 88 | 353 | 5 | 268 | 6.03e-109 | 321 |
MS.gene76824.t1 | AT5G06750 | 57.200 | 250 | 106 | 1 | 91 | 339 | 30 | 279 | 3.25e-98 | 295 |
MS.gene76824.t1 | AT3G17090 | 52.963 | 270 | 123 | 2 | 22 | 290 | 45 | 311 | 3.62e-98 | 295 |
MS.gene76824.t1 | AT3G16560 | 33.858 | 254 | 154 | 5 | 98 | 345 | 245 | 490 | 2.62e-34 | 132 |
MS.gene76824.t1 | AT3G16560 | 33.858 | 254 | 154 | 5 | 98 | 345 | 245 | 490 | 2.62e-34 | 132 |
MS.gene76824.t1 | AT3G16560 | 33.858 | 254 | 154 | 5 | 98 | 345 | 245 | 490 | 2.62e-34 | 132 |
MS.gene76824.t1 | AT5G02400 | 31.884 | 276 | 148 | 6 | 98 | 338 | 396 | 666 | 5.79e-33 | 130 |
MS.gene76824.t1 | AT2G46920 | 28.479 | 309 | 157 | 5 | 99 | 348 | 543 | 846 | 2.78e-32 | 129 |
MS.gene76824.t1 | AT2G46920 | 28.479 | 309 | 157 | 5 | 99 | 348 | 543 | 846 | 2.78e-32 | 129 |
MS.gene76824.t1 | AT2G46920 | 28.479 | 309 | 157 | 5 | 99 | 348 | 543 | 846 | 2.78e-32 | 129 |
MS.gene76824.t1 | AT2G46920 | 28.479 | 309 | 157 | 5 | 99 | 348 | 543 | 846 | 2.78e-32 | 129 |
MS.gene76824.t1 | AT2G35350 | 28.328 | 293 | 157 | 5 | 93 | 337 | 483 | 770 | 8.94e-32 | 127 |
MS.gene76824.t1 | AT2G28890 | 31.317 | 281 | 150 | 6 | 96 | 338 | 371 | 646 | 3.54e-31 | 125 |
MS.gene76824.t1 | AT3G09400 | 32.090 | 268 | 144 | 7 | 100 | 338 | 384 | 642 | 1.23e-30 | 124 |
MS.gene76824.t1 | AT1G07630 | 31.159 | 276 | 150 | 5 | 98 | 338 | 384 | 654 | 1.37e-30 | 123 |
MS.gene76824.t1 | AT2G40180 | 30.142 | 282 | 135 | 9 | 61 | 337 | 161 | 385 | 4.15e-28 | 114 |
MS.gene76824.t1 | AT1G67820 | 31.461 | 267 | 128 | 7 | 60 | 316 | 114 | 335 | 6.90e-28 | 113 |
MS.gene76824.t1 | AT1G67820 | 31.461 | 267 | 128 | 7 | 60 | 316 | 150 | 371 | 9.81e-28 | 114 |
MS.gene76824.t1 | AT3G16560 | 33.641 | 217 | 128 | 4 | 98 | 306 | 245 | 453 | 5.48e-26 | 108 |
MS.gene76824.t1 | AT1G07160 | 29.000 | 300 | 148 | 9 | 46 | 337 | 134 | 376 | 9.08e-26 | 107 |
MS.gene76824.t1 | AT2G30020 | 30.605 | 281 | 133 | 8 | 63 | 339 | 172 | 394 | 4.30e-23 | 100 |
MS.gene76824.t1 | AT3G09400 | 29.851 | 268 | 145 | 10 | 100 | 337 | 384 | 638 | 7.09e-22 | 97.8 |
MS.gene76824.t1 | AT4G31750 | 31.048 | 248 | 121 | 8 | 63 | 305 | 66 | 268 | 1.60e-21 | 94.4 |
MS.gene76824.t1 | AT4G31750 | 31.048 | 248 | 121 | 8 | 63 | 305 | 66 | 268 | 1.61e-21 | 94.4 |
MS.gene76824.t1 | AT4G31750 | 31.048 | 248 | 121 | 8 | 63 | 305 | 66 | 268 | 1.61e-21 | 94.4 |
MS.gene76824.t1 | AT1G43900 | 29.893 | 281 | 129 | 10 | 61 | 338 | 154 | 369 | 9.44e-21 | 93.2 |
MS.gene76824.t1 | AT1G07430 | 28.520 | 277 | 145 | 9 | 25 | 284 | 114 | 354 | 3.56e-20 | 92.0 |
MS.gene76824.t1 | AT2G33700 | 28.767 | 292 | 139 | 11 | 51 | 335 | 113 | 342 | 4.68e-19 | 88.2 |
MS.gene76824.t1 | AT2G29380 | 27.124 | 306 | 156 | 12 | 54 | 337 | 100 | 360 | 3.44e-18 | 85.5 |
MS.gene76824.t1 | AT5G10740 | 27.536 | 276 | 133 | 8 | 63 | 335 | 66 | 277 | 9.01e-18 | 84.3 |
MS.gene76824.t1 | AT5G10740 | 27.536 | 276 | 133 | 8 | 63 | 335 | 66 | 277 | 9.01e-18 | 84.3 |
MS.gene76824.t1 | AT1G48040 | 29.730 | 296 | 152 | 10 | 54 | 343 | 110 | 355 | 2.33e-17 | 83.2 |
MS.gene76824.t1 | AT3G62260 | 30.315 | 254 | 137 | 10 | 57 | 304 | 24 | 243 | 3.12e-17 | 81.6 |
MS.gene76824.t1 | AT5G53140 | 26.531 | 294 | 148 | 10 | 63 | 353 | 134 | 362 | 5.67e-17 | 82.4 |
MS.gene76824.t1 | AT5G53140 | 26.531 | 294 | 148 | 10 | 63 | 353 | 134 | 362 | 5.67e-17 | 82.4 |
MS.gene76824.t1 | AT2G25620 | 26.408 | 284 | 154 | 11 | 57 | 337 | 125 | 356 | 6.17e-17 | 82.0 |
MS.gene76824.t1 | AT2G25620 | 26.408 | 284 | 154 | 11 | 57 | 337 | 125 | 356 | 6.17e-17 | 82.0 |
MS.gene76824.t1 | AT4G26080 | 29.153 | 295 | 153 | 13 | 58 | 337 | 169 | 422 | 8.06e-17 | 82.0 |
MS.gene76824.t1 | AT3G62260 | 30.315 | 254 | 137 | 10 | 57 | 304 | 113 | 332 | 1.00e-16 | 81.3 |
MS.gene76824.t1 | AT5G51760 | 28.099 | 242 | 121 | 9 | 61 | 283 | 114 | 321 | 1.06e-16 | 81.3 |
MS.gene76824.t1 | AT3G62260 | 30.315 | 254 | 137 | 10 | 57 | 304 | 114 | 333 | 1.19e-16 | 81.3 |
MS.gene76824.t1 | AT5G24940 | 27.536 | 276 | 133 | 8 | 63 | 335 | 66 | 277 | 1.32e-16 | 81.3 |
MS.gene76824.t1 | AT5G51760 | 28.099 | 242 | 121 | 9 | 61 | 283 | 144 | 351 | 1.36e-16 | 81.3 |
MS.gene76824.t1 | AT5G59220 | 28.333 | 240 | 125 | 8 | 54 | 284 | 141 | 342 | 1.51e-16 | 80.9 |
MS.gene76824.t1 | AT1G18030 | 26.990 | 289 | 146 | 10 | 43 | 303 | 83 | 334 | 2.13e-15 | 77.0 |
MS.gene76824.t1 | AT4G31860 | 25.818 | 275 | 120 | 11 | 58 | 284 | 49 | 287 | 3.52e-15 | 75.9 |
MS.gene76824.t1 | AT4G31860 | 25.818 | 275 | 120 | 11 | 58 | 284 | 49 | 287 | 6.72e-15 | 75.9 |
MS.gene76824.t1 | AT3G51470 | 25.168 | 298 | 150 | 10 | 47 | 335 | 48 | 281 | 7.33e-15 | 75.1 |
MS.gene76824.t1 | AT3G51470 | 25.168 | 298 | 150 | 10 | 47 | 335 | 92 | 325 | 1.11e-14 | 75.1 |
MS.gene76824.t1 | AT1G78200 | 25.649 | 308 | 159 | 10 | 36 | 335 | 35 | 280 | 1.89e-14 | 73.6 |
MS.gene76824.t1 | AT1G78200 | 25.649 | 308 | 159 | 10 | 36 | 335 | 35 | 280 | 1.89e-14 | 73.6 |
MS.gene76824.t1 | AT1G78200 | 25.649 | 308 | 159 | 10 | 36 | 335 | 35 | 280 | 1.89e-14 | 73.6 |
MS.gene76824.t1 | AT3G16800 | 27.483 | 302 | 150 | 14 | 60 | 337 | 92 | 348 | 2.11e-14 | 74.3 |
MS.gene76824.t1 | AT3G16800 | 27.483 | 302 | 150 | 14 | 60 | 337 | 92 | 348 | 2.11e-14 | 74.3 |
MS.gene76824.t1 | AT3G16800 | 27.483 | 302 | 150 | 14 | 60 | 337 | 92 | 348 | 2.11e-14 | 74.3 |
MS.gene76824.t1 | AT5G57050 | 25.597 | 293 | 167 | 11 | 58 | 337 | 157 | 411 | 2.93e-14 | 74.3 |
MS.gene76824.t1 | AT5G57050 | 25.597 | 293 | 167 | 11 | 58 | 337 | 117 | 371 | 3.07e-14 | 73.9 |
MS.gene76824.t1 | AT4G08260 | 26.715 | 277 | 116 | 8 | 63 | 339 | 21 | 210 | 4.59e-14 | 71.2 |
MS.gene76824.t1 | AT2G40860 | 28.369 | 282 | 137 | 10 | 63 | 337 | 425 | 648 | 9.86e-14 | 73.2 |
MS.gene76824.t1 | AT2G40860 | 28.369 | 282 | 137 | 10 | 63 | 337 | 327 | 550 | 9.88e-14 | 73.2 |
MS.gene76824.t1 | AT4G28400 | 27.309 | 249 | 129 | 10 | 64 | 306 | 48 | 250 | 1.82e-13 | 70.5 |
MS.gene76824.t1 | AT3G16800 | 28.571 | 252 | 124 | 11 | 98 | 337 | 46 | 253 | 1.86e-13 | 70.1 |
MS.gene76824.t1 | AT3G16800 | 28.571 | 252 | 124 | 11 | 98 | 337 | 46 | 253 | 1.86e-13 | 70.1 |
MS.gene76824.t1 | AT4G31860 | 26.236 | 263 | 110 | 11 | 58 | 272 | 49 | 275 | 2.59e-13 | 70.1 |
MS.gene76824.t1 | AT4G28400 | 27.309 | 249 | 129 | 10 | 64 | 306 | 70 | 272 | 2.67e-13 | 70.1 |
MS.gene76824.t1 | AT2G25070 | 26.277 | 274 | 118 | 12 | 59 | 284 | 50 | 287 | 3.82e-13 | 70.5 |
MS.gene76824.t1 | AT2G25070 | 26.277 | 274 | 118 | 12 | 59 | 284 | 50 | 287 | 3.82e-13 | 70.5 |
MS.gene76824.t1 | AT2G40860 | 27.823 | 248 | 136 | 7 | 63 | 303 | 425 | 636 | 4.69e-13 | 70.9 |
MS.gene76824.t1 | AT5G26010 | 26.441 | 295 | 174 | 10 | 52 | 337 | 64 | 324 | 5.09e-13 | 69.7 |
MS.gene76824.t1 | AT1G22280 | 26.855 | 283 | 153 | 11 | 36 | 306 | 36 | 276 | 9.31e-13 | 68.6 |
MS.gene76824.t1 | AT1G03590 | 26.361 | 349 | 186 | 14 | 54 | 371 | 83 | 391 | 2.11e-12 | 68.6 |
MS.gene76824.t1 | AT1G18030 | 27.200 | 250 | 130 | 9 | 43 | 273 | 83 | 299 | 2.18e-12 | 67.8 |
MS.gene76824.t1 | AT5G01700 | 26.531 | 294 | 169 | 11 | 61 | 339 | 29 | 290 | 2.36e-12 | 67.8 |
MS.gene76824.t1 | AT5G01700 | 26.531 | 294 | 169 | 11 | 61 | 339 | 78 | 339 | 2.57e-12 | 68.2 |
MS.gene76824.t1 | AT1G78200 | 26.996 | 263 | 138 | 11 | 54 | 306 | 9 | 227 | 3.34e-12 | 66.2 |
MS.gene76824.t1 | AT1G78200 | 26.996 | 263 | 138 | 11 | 54 | 306 | 9 | 227 | 3.34e-12 | 66.2 |
MS.gene76824.t1 | AT1G17550 | 25.472 | 318 | 158 | 13 | 56 | 337 | 227 | 501 | 8.19e-12 | 67.0 |
MS.gene76824.t1 | AT1G17550 | 25.472 | 318 | 158 | 13 | 56 | 337 | 227 | 501 | 8.19e-12 | 67.0 |
MS.gene76824.t1 | AT4G27800 | 27.711 | 249 | 136 | 9 | 58 | 284 | 85 | 311 | 1.08e-11 | 65.9 |
MS.gene76824.t1 | AT4G27800 | 27.711 | 249 | 136 | 9 | 58 | 284 | 85 | 311 | 1.23e-11 | 65.9 |
MS.gene76824.t1 | AT1G72770 | 25.472 | 318 | 168 | 10 | 48 | 337 | 225 | 501 | 1.38e-11 | 66.2 |
MS.gene76824.t1 | AT1G72770 | 25.472 | 318 | 168 | 10 | 48 | 337 | 225 | 501 | 1.38e-11 | 66.2 |
MS.gene76824.t1 | AT1G72770 | 25.472 | 318 | 168 | 10 | 48 | 337 | 225 | 501 | 1.38e-11 | 66.2 |
MS.gene76824.t1 | AT2G34740 | 23.642 | 313 | 156 | 10 | 36 | 335 | 90 | 332 | 1.59e-11 | 65.5 |
MS.gene76824.t1 | AT4G27800 | 27.106 | 273 | 155 | 9 | 58 | 308 | 85 | 335 | 1.93e-11 | 65.5 |
Find 83 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGGATCATGTTGTCTTCT+TGG | 0.195703 | 1.1:+76621968 | MS.gene76824:CDS |
AGATACTGACTGTGTAAATA+AGG | 0.264924 | 1.1:-76621360 | None:intergenic |
ACTAGTAAGAGCTGCTCTTC+AGG | 0.291775 | 1.1:+76622923 | MS.gene76824:CDS |
GATGGTTCAGCTGTCATTAC+TGG | 0.293354 | 1.1:-76622675 | None:intergenic |
CTGAACCATCAATCATCATT+AGG | 0.315695 | 1.1:+76622688 | MS.gene76824:CDS |
GACGCAATCTGAGGACTAAT+TGG | 0.330240 | 1.1:-76621944 | None:intergenic |
GGTGACTCTAGAGTTGTTCT+TGG | 0.332422 | 1.1:+76622028 | MS.gene76824:CDS |
TATTTGCATCAGATGGCCTT+TGG | 0.354565 | 1.1:+76622739 | MS.gene76824:CDS |
TTGACAAATCTAGAAGCTTC+AGG | 0.361584 | 1.1:-76621324 | None:intergenic |
TTTAGAGAAAATATATCAAC+AGG | 0.367089 | 1.1:-76623113 | None:intergenic |
ATTTGCATCAGATGGCCTTT+GGG | 0.407098 | 1.1:+76622740 | MS.gene76824:CDS |
ACTGGACGCTTCAAAGGAAT+AGG | 0.409207 | 1.1:-76622657 | None:intergenic |
ATGGGATCTCTGTAGAAATC+TGG | 0.417500 | 1.1:-76622615 | None:intergenic |
ACCACAATGTGTGAATCATC+AGG | 0.421762 | 1.1:-76622157 | None:intergenic |
AGCTCCCTAATGATGATTGA+TGG | 0.423360 | 1.1:-76622693 | None:intergenic |
TGGTTTATAGCCGTGGTGTT+TGG | 0.426614 | 1.1:+76622176 | MS.gene76824:CDS |
TGAACCATCAATCATCATTA+GGG | 0.429934 | 1.1:+76622689 | MS.gene76824:CDS |
CATAAGATACTCACAGCTCT+TGG | 0.439024 | 1.1:-76622807 | None:intergenic |
TTCTTAATATTTGCATCAGA+TGG | 0.445890 | 1.1:+76622732 | MS.gene76824:CDS |
TTTCTCAATTGCCGTTGCTC+AGG | 0.469493 | 1.1:+76621218 | MS.gene76824:CDS |
TTGCAGGTGTCTAGATCTAT+TGG | 0.477815 | 1.1:+76622573 | MS.gene76824:intron |
GATACTGACTGTGTAAATAA+GGG | 0.479550 | 1.1:-76621359 | None:intergenic |
AAGAGCATGCTTGGTTCAGT+TGG | 0.486918 | 1.1:+76623152 | MS.gene76824:CDS |
GAATCTGAGAAGAGCATGCT+TGG | 0.489881 | 1.1:+76623143 | MS.gene76824:CDS |
AGCAGCTCTTACTAGTCTCT+TGG | 0.490227 | 1.1:-76622916 | None:intergenic |
TGTGTTGTATGTTGCCAACC+TGG | 0.492259 | 1.1:+76622006 | MS.gene76824:CDS |
GACTTGAAACCTCACGCCTC+CGG | 0.498145 | 1.1:+76621192 | MS.gene76824:CDS |
TTTATAGCCGTGGTGTTTGG+AGG | 0.501496 | 1.1:+76622179 | MS.gene76824:CDS |
CCGTGGTGTTTGGAGGATCA+AGG | 0.503122 | 1.1:+76622186 | MS.gene76824:CDS |
GTCATTACTGGACGCTTCAA+AGG | 0.503992 | 1.1:-76622663 | None:intergenic |
CACATTGTGGTTTATAGCCG+TGG | 0.506241 | 1.1:+76622169 | MS.gene76824:CDS |
GAGGATCAAGGGCATCATAC+AGG | 0.507950 | 1.1:+76622198 | MS.gene76824:CDS |
GTGCCTCTGACTTTCTCCTC+TGG | 0.508030 | 1.1:+76621163 | MS.gene76824:CDS |
CCCTGATGATTCACACATTG+TGG | 0.513642 | 1.1:+76622156 | MS.gene76824:CDS |
ACTCTAGAGTTGTTCTTGGT+AGG | 0.521401 | 1.1:+76622032 | MS.gene76824:CDS |
ACCTATGTCGGTGTTTATGA+TGG | 0.523773 | 1.1:+76621291 | MS.gene76824:CDS |
GTAGAATTTGCCTCTGAACA+AGG | 0.528771 | 1.1:+76621842 | MS.gene76824:intron |
TAGTCCTCAGATTGCGTCTG+TGG | 0.530528 | 1.1:+76621949 | MS.gene76824:CDS |
CATGCTCTTCTCAGATTCAT+CGG | 0.531284 | 1.1:-76623138 | None:intergenic |
TCTCCTTCCGCCACCTATGT+CGG | 0.544351 | 1.1:+76621279 | MS.gene76824:CDS |
GGAGGCTGTGCGCTTGTCAA+CGG | 0.547101 | 1.1:+76622084 | MS.gene76824:CDS |
TAGAATTTGCCTCTGAACAA+GGG | 0.551971 | 1.1:+76621843 | MS.gene76824:intron |
CGTGGTGTTTGGAGGATCAA+GGG | 0.557389 | 1.1:+76622187 | MS.gene76824:CDS |
AGTCAGAGGCACCACGGCGA+CGG | 0.560686 | 1.1:-76621152 | None:intergenic |
GAGTTTAAGCAAACTGCTGT+TGG | 0.576565 | 1.1:+76623077 | MS.gene76824:CDS |
GACATAGGTGGCGGAAGGAG+AGG | 0.580248 | 1.1:-76621277 | None:intergenic |
GAACAAGAATTCTTCTGTGG+AGG | 0.580777 | 1.1:+76622066 | MS.gene76824:CDS |
AACTCTAGAGTCACCCAGGT+TGG | 0.586854 | 1.1:-76622020 | None:intergenic |
CATCACTTAATTGTTCCCAA+AGG | 0.592457 | 1.1:-76622755 | None:intergenic |
GGATCATAATGTAGCTGATG+AGG | 0.594161 | 1.1:+76622105 | MS.gene76824:CDS |
TGAGAACAAGAATTCTTCTG+TGG | 0.594227 | 1.1:+76622063 | MS.gene76824:CDS |
TGTGTAAATAAGGGAAAAGA+CGG | 0.595113 | 1.1:-76621350 | None:intergenic |
GTGATCTATCTTGATCAGCA+TGG | 0.596846 | 1.1:+76623038 | MS.gene76824:CDS |
ACCATCATAAACACCGACAT+AGG | 0.601759 | 1.1:-76621292 | None:intergenic |
CGATAACAGTGATATCGTCA+TGG | 0.607261 | 1.1:-76623016 | None:intergenic |
GTCGGTGTTTATGATGGTCA+CGG | 0.608831 | 1.1:+76621297 | MS.gene76824:CDS |
GGAGAAAGTCAGAGGCACCA+CGG | 0.613215 | 1.1:-76621158 | None:intergenic |
GTTTCAAGTCTGTGTGCCAG+AGG | 0.616689 | 1.1:-76621179 | None:intergenic |
ATCATAAACACCGACATAGG+TGG | 0.616793 | 1.1:-76621289 | None:intergenic |
AACGGCAATTGAGAAATCAC+CGG | 0.616907 | 1.1:-76621211 | None:intergenic |
CCACAATGTGTGAATCATCA+GGG | 0.617006 | 1.1:-76622156 | None:intergenic |
AGTCCTCAGATTGCGTCTGT+GGG | 0.621414 | 1.1:+76621950 | MS.gene76824:CDS |
GAGAAATCACCGGAGGCGTG+AGG | 0.628233 | 1.1:-76621201 | None:intergenic |
GTGCCAGAGGAGAAAGTCAG+AGG | 0.628468 | 1.1:-76621166 | None:intergenic |
AGAATTTGCCTCTGAACAAG+GGG | 0.635083 | 1.1:+76621844 | MS.gene76824:intron |
GACATAAAGAAAATTGACAA+AGG | 0.637095 | 1.1:+76622978 | MS.gene76824:CDS |
ATGTAGCTGATGAGGAAGTG+AGG | 0.643026 | 1.1:+76622113 | MS.gene76824:CDS |
ATAAACACCGACATAGGTGG+CGG | 0.644245 | 1.1:-76621286 | None:intergenic |
ACACCGACATAGGTGGCGGA+AGG | 0.644257 | 1.1:-76621282 | None:intergenic |
GTGTTGTATGTTGCCAACCT+GGG | 0.647500 | 1.1:+76622007 | MS.gene76824:CDS |
AGAGTAATTAGCCTGAGCAA+CGG | 0.654865 | 1.1:-76621229 | None:intergenic |
GATCCCACAGACGCAATCTG+AGG | 0.664939 | 1.1:-76621953 | None:intergenic |
CAGCATGGAAGCTCTTCTAG+TGG | 0.667037 | 1.1:+76623053 | MS.gene76824:CDS |
TAGAGAAAATATATCAACAG+GGG | 0.669880 | 1.1:-76623111 | None:intergenic |
GAACAACTCTAGAGTCACCC+AGG | 0.676212 | 1.1:-76622024 | None:intergenic |
GGCAATTGAGAAATCACCGG+AGG | 0.706892 | 1.1:-76621208 | None:intergenic |
GGCGTTTAGTAAGACCGAGG+AGG | 0.718692 | 1.1:+76621892 | MS.gene76824:CDS |
TTAGAGAAAATATATCAACA+GGG | 0.731235 | 1.1:-76623112 | None:intergenic |
CAATGTGTGAATCATCAGGG+TGG | 0.738705 | 1.1:-76622153 | None:intergenic |
GAATTTGCCTCTGAACAAGG+GGG | 0.739786 | 1.1:+76621845 | MS.gene76824:intron |
AAAGGCGTTTAGTAAGACCG+AGG | 0.745268 | 1.1:+76621889 | MS.gene76824:CDS |
CCTTGATCCTCCAAACACCA+CGG | 0.748053 | 1.1:-76622186 | None:intergenic |
GGTGTTTATGATGGTCACGG+TGG | 0.807193 | 1.1:+76621300 | MS.gene76824:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAACATAGGTT+CGG | - | chr1.1:76621772-76621791 | None:intergenic | 15.0% |
!! | TAAATAATAACTACAAGTAA+TGG | - | chr1.1:76621391-76621410 | None:intergenic | 15.0% |
!! | TACCAAAAAAAAAAAAACAT+AGG | - | chr1.1:76621777-76621796 | None:intergenic | 15.0% |
!!! | AACCTATGTTTTTTTTTTTT+TGG | + | chr1.1:76621772-76621791 | MS.gene76824:intron | 15.0% |
!!! | CTAGTTTTTTTTTATTAGTT+TGG | + | chr1.1:76621425-76621444 | MS.gene76824:intron | 15.0% |
!! | ACAAAAAATGTACATAATGA+AGG | - | chr1.1:76622410-76622429 | None:intergenic | 20.0% |
!! | ACAAATATAATATATACCGT+TGG | + | chr1.1:76622222-76622241 | MS.gene76824:intron | 20.0% |
!! | TATTAAGATCCAATTTGATT+TGG | + | chr1.1:76621504-76621523 | MS.gene76824:intron | 20.0% |
!! | TCAAAAAATCCAAATCAAAT+TGG | - | chr1.1:76621516-76621535 | None:intergenic | 20.0% |
!! | TTAGAGAAAATATATCAACA+GGG | - | chr1.1:76623115-76623134 | None:intergenic | 20.0% |
!! | TTTAGAGAAAATATATCAAC+AGG | - | chr1.1:76623116-76623135 | None:intergenic | 20.0% |
! | ATTGACAGAAAATATAACGA+TGG | - | chr1.1:76621699-76621718 | None:intergenic | 25.0% |
! | GACATAAAGAAAATTGACAA+AGG | + | chr1.1:76622978-76622997 | MS.gene76824:CDS | 25.0% |
! | TAATTGCAAATAAAAACCAC+CGG | - | chr1.1:76622336-76622355 | None:intergenic | 25.0% |
! | TAGAGAAAATATATCAACAG+GGG | - | chr1.1:76623114-76623133 | None:intergenic | 25.0% |
! | TTCTTAATATTTGCATCAGA+TGG | + | chr1.1:76622732-76622751 | MS.gene76824:CDS | 25.0% |
!! | AGAGTTTCAATTTTCTTACA+TGG | + | chr1.1:76622855-76622874 | MS.gene76824:intron | 25.0% |
!! | TCGTTATATTTTCTGTCAAT+TGG | + | chr1.1:76621699-76621718 | MS.gene76824:intron | 25.0% |
!!! | GTTTATTTTTGCCGATAAAT+GGG | + | chr1.1:76622514-76622533 | MS.gene76824:intron | 25.0% |
!!! | TTTATTTTTGCCGATAAATG+GGG | + | chr1.1:76622515-76622534 | MS.gene76824:intron | 25.0% |
ATTTCCAAATTGCCGAAAAA+TGG | - | chr1.1:76622637-76622656 | None:intergenic | 30.0% | |
CTTTGTTAATAAGAGACCAA+CGG | - | chr1.1:76622241-76622260 | None:intergenic | 30.0% | |
TGAACCATCAATCATCATTA+GGG | + | chr1.1:76622689-76622708 | MS.gene76824:CDS | 30.0% | |
TGTGTAAATAAGGGAAAAGA+CGG | - | chr1.1:76621353-76621372 | None:intergenic | 30.0% | |
TTTCCAAATTGCCGAAAAAT+GGG | - | chr1.1:76622636-76622655 | None:intergenic | 30.0% | |
! | AGATACTGACTGTGTAAATA+AGG | - | chr1.1:76621363-76621382 | None:intergenic | 30.0% |
! | GATACTGACTGTGTAAATAA+GGG | - | chr1.1:76621362-76621381 | None:intergenic | 30.0% |
!!! | CAGTTTTTTGTTTATGTTGC+AGG | + | chr1.1:76622557-76622576 | MS.gene76824:intron | 30.0% |
!!! | GGTTTATTTTTGCCGATAAA+TGG | + | chr1.1:76622513-76622532 | MS.gene76824:intron | 30.0% |
CATCACTTAATTGTTCCCAA+AGG | - | chr1.1:76622758-76622777 | None:intergenic | 35.0% | |
CTGAACCATCAATCATCATT+AGG | + | chr1.1:76622688-76622707 | MS.gene76824:CDS | 35.0% | |
GTCAGCAGATGTGATAAAAA+AGG | + | chr1.1:76621871-76621890 | MS.gene76824:CDS | 35.0% | |
TAGAATTTGCCTCTGAACAA+GGG | + | chr1.1:76621843-76621862 | MS.gene76824:intron | 35.0% | |
TGAGAACAAGAATTCTTCTG+TGG | + | chr1.1:76622063-76622082 | MS.gene76824:CDS | 35.0% | |
TTGACAAATCTAGAAGCTTC+AGG | - | chr1.1:76621327-76621346 | None:intergenic | 35.0% | |
! | GATTGTGGTGTAATTTTGTC+CGG | + | chr1.1:76622314-76622333 | MS.gene76824:intron | 35.0% |
!! | ACATGTCGATGTGTTTTTGT+TGG | + | chr1.1:76621647-76621666 | MS.gene76824:intron | 35.0% |
!! | TCTACAGAGATCCCATTTTT+CGG | + | chr1.1:76622622-76622641 | MS.gene76824:CDS | 35.0% |
!! | TTATTAGTTTGGTGCAGCAT+TGG | + | chr1.1:76621436-76621455 | MS.gene76824:intron | 35.0% |
AACGGCAATTGAGAAATCAC+CGG | - | chr1.1:76621214-76621233 | None:intergenic | 40.0% | |
ACCACAATGTGTGAATCATC+AGG | - | chr1.1:76622160-76622179 | None:intergenic | 40.0% | |
ACCATCATAAACACCGACAT+AGG | - | chr1.1:76621295-76621314 | None:intergenic | 40.0% | |
AGAATTTGCCTCTGAACAAG+GGG | + | chr1.1:76621844-76621863 | MS.gene76824:intron | 40.0% | |
AGCTCCCTAATGATGATTGA+TGG | - | chr1.1:76622696-76622715 | None:intergenic | 40.0% | |
ATCATAAACACCGACATAGG+TGG | - | chr1.1:76621292-76621311 | None:intergenic | 40.0% | |
ATGGGATCTCTGTAGAAATC+TGG | - | chr1.1:76622618-76622637 | None:intergenic | 40.0% | |
ATTTGCATCAGATGGCCTTT+GGG | + | chr1.1:76622740-76622759 | MS.gene76824:CDS | 40.0% | |
CAAATGCAAAAAGTCCTCCT+CGG | - | chr1.1:76621909-76621928 | None:intergenic | 40.0% | |
CACATCGACATGTCAAACAT+TGG | - | chr1.1:76621640-76621659 | None:intergenic | 40.0% | |
CATAAGATACTCACAGCTCT+TGG | - | chr1.1:76622810-76622829 | None:intergenic | 40.0% | |
CATGCTCTTCTCAGATTCAT+CGG | - | chr1.1:76623141-76623160 | None:intergenic | 40.0% | |
CCACAATGTGTGAATCATCA+GGG | - | chr1.1:76622159-76622178 | None:intergenic | 40.0% | |
CGATAACAGTGATATCGTCA+TGG | - | chr1.1:76623019-76623038 | None:intergenic | 40.0% | |
GAACAAGAATTCTTCTGTGG+AGG | + | chr1.1:76622066-76622085 | MS.gene76824:CDS | 40.0% | |
GACGGAAGCAAAAATCAAGA+GGG | - | chr1.1:76621137-76621156 | None:intergenic | 40.0% | |
GAGTTTAAGCAAACTGCTGT+TGG | + | chr1.1:76623077-76623096 | MS.gene76824:CDS | 40.0% | |
GGATCATAATGTAGCTGATG+AGG | + | chr1.1:76622105-76622124 | MS.gene76824:CDS | 40.0% | |
GTAGAATTTGCCTCTGAACA+AGG | + | chr1.1:76621842-76621861 | MS.gene76824:intron | 40.0% | |
GTGATCTATCTTGATCAGCA+TGG | + | chr1.1:76623038-76623057 | MS.gene76824:CDS | 40.0% | |
TACCAACATGTCTGTGATTG+TGG | + | chr1.1:76622299-76622318 | MS.gene76824:intron | 40.0% | |
TATTTGCATCAGATGGCCTT+TGG | + | chr1.1:76622739-76622758 | MS.gene76824:CDS | 40.0% | |
TTGCAGGTGTCTAGATCTAT+TGG | + | chr1.1:76622573-76622592 | MS.gene76824:intron | 40.0% | |
TTTGCCGATAAATGGGGTAA+GGG | + | chr1.1:76622521-76622540 | MS.gene76824:intron | 40.0% | |
! | ACCTATGTCGGTGTTTATGA+TGG | + | chr1.1:76621291-76621310 | MS.gene76824:CDS | 40.0% |
! | AGAGTAATTAGCCTGAGCAA+CGG | - | chr1.1:76621232-76621251 | None:intergenic | 40.0% |
! | TTTTGCCGATAAATGGGGTA+AGG | + | chr1.1:76622520-76622539 | MS.gene76824:intron | 40.0% |
!! | ACTCTAGAGTTGTTCTTGGT+AGG | + | chr1.1:76622032-76622051 | MS.gene76824:CDS | 40.0% |
!! | GATCCCATTTTTCGGCAATT+TGG | + | chr1.1:76622630-76622649 | MS.gene76824:CDS | 40.0% |
!!! | TTGTTTTTGTTCCACGTGCA+GGG | + | chr1.1:76622888-76622907 | MS.gene76824:intron | 40.0% |
!!! | TTTGTTTTTGTTCCACGTGC+AGG | + | chr1.1:76622887-76622906 | MS.gene76824:intron | 40.0% |
ACACCAACACCTCTTATCCA+AGG | + | chr1.1:76621577-76621596 | MS.gene76824:intron | 45.0% | |
ACTAGTAAGAGCTGCTCTTC+AGG | + | chr1.1:76622923-76622942 | MS.gene76824:CDS | 45.0% | |
ACTGGACGCTTCAAAGGAAT+AGG | - | chr1.1:76622660-76622679 | None:intergenic | 45.0% | |
ATAAACACCGACATAGGTGG+CGG | - | chr1.1:76621289-76621308 | None:intergenic | 45.0% | |
ATGTAGCTGATGAGGAAGTG+AGG | + | chr1.1:76622113-76622132 | MS.gene76824:CDS | 45.0% | |
CAATGTGTGAATCATCAGGG+TGG | - | chr1.1:76622156-76622175 | None:intergenic | 45.0% | |
CACATTGTGGTTTATAGCCG+TGG | + | chr1.1:76622169-76622188 | MS.gene76824:CDS | 45.0% | |
CACCACAATCACAGACATGT+TGG | - | chr1.1:76622304-76622323 | None:intergenic | 45.0% | |
CCCTGATGATTCACACATTG+TGG | + | chr1.1:76622156-76622175 | MS.gene76824:CDS | 45.0% | |
CGACGGAAGCAAAAATCAAG+AGG | - | chr1.1:76621138-76621157 | None:intergenic | 45.0% | |
GAATTTGCCTCTGAACAAGG+GGG | + | chr1.1:76621845-76621864 | MS.gene76824:intron | 45.0% | |
GACGCAATCTGAGGACTAAT+TGG | - | chr1.1:76621947-76621966 | None:intergenic | 45.0% | |
GAGGCAAGCTTATACAATGC+TGG | - | chr1.1:76622455-76622474 | None:intergenic | 45.0% | |
GATGGTTCAGCTGTCATTAC+TGG | - | chr1.1:76622678-76622697 | None:intergenic | 45.0% | |
GCTACCCTTACCCCATTTAT+CGG | - | chr1.1:76622528-76622547 | None:intergenic | 45.0% | |
GTCATTACTGGACGCTTCAA+AGG | - | chr1.1:76622666-76622685 | None:intergenic | 45.0% | |
GTGGGATCATGTTGTCTTCT+TGG | + | chr1.1:76621968-76621987 | MS.gene76824:CDS | 45.0% | |
GTGTTGTATGTTGCCAACCT+GGG | + | chr1.1:76622007-76622026 | MS.gene76824:CDS | 45.0% | |
TGGTTTATAGCCGTGGTGTT+TGG | + | chr1.1:76622176-76622195 | MS.gene76824:CDS | 45.0% | |
TGTGTTGTATGTTGCCAACC+TGG | + | chr1.1:76622006-76622025 | MS.gene76824:CDS | 45.0% | |
TTGCCTCGCTTATCAGTTAG+AGG | + | chr1.1:76622468-76622487 | MS.gene76824:intron | 45.0% | |
TTTATAGCCGTGGTGTTTGG+AGG | + | chr1.1:76622179-76622198 | MS.gene76824:CDS | 45.0% | |
TTTCTCAATTGCCGTTGCTC+AGG | + | chr1.1:76621218-76621237 | MS.gene76824:CDS | 45.0% | |
! | AAGAGCATGCTTGGTTCAGT+TGG | + | chr1.1:76623152-76623171 | MS.gene76824:CDS | 45.0% |
! | AGCAGCTCTTACTAGTCTCT+TGG | - | chr1.1:76622919-76622938 | None:intergenic | 45.0% |
! | CGAGGAGGACTTTTTGCATT+TGG | + | chr1.1:76621907-76621926 | MS.gene76824:CDS | 45.0% |
! | GAATCTGAGAAGAGCATGCT+TGG | + | chr1.1:76623143-76623162 | MS.gene76824:CDS | 45.0% |
! | GTCGGTGTTTATGATGGTCA+CGG | + | chr1.1:76621297-76621316 | MS.gene76824:CDS | 45.0% |
! | TGTGGTGTAATTTTGTCCGG+TGG | + | chr1.1:76622317-76622336 | MS.gene76824:intron | 45.0% |
!! | AAAGGCGTTTAGTAAGACCG+AGG | + | chr1.1:76621889-76621908 | MS.gene76824:CDS | 45.0% |
!! | ATCAGTTAGAGGTGCTGCAA+GGG | + | chr1.1:76622479-76622498 | MS.gene76824:intron | 45.0% |
!! | GGTGACTCTAGAGTTGTTCT+TGG | + | chr1.1:76622028-76622047 | MS.gene76824:CDS | 45.0% |
!! | TATCAGTTAGAGGTGCTGCA+AGG | + | chr1.1:76622478-76622497 | MS.gene76824:intron | 45.0% |
AGTCCTCAGATTGCGTCTGT+GGG | + | chr1.1:76621950-76621969 | MS.gene76824:CDS | 50.0% | |
CAGCATGGAAGCTCTTCTAG+TGG | + | chr1.1:76623053-76623072 | MS.gene76824:CDS | 50.0% | |
CCTTGATCCTCCAAACACCA+CGG | - | chr1.1:76622189-76622208 | None:intergenic | 50.0% | |
CGTGGTGTTTGGAGGATCAA+GGG | + | chr1.1:76622187-76622206 | MS.gene76824:CDS | 50.0% | |
GCACCTCTAACTGATAAGCG+AGG | - | chr1.1:76622474-76622493 | None:intergenic | 50.0% | |
GGCAATTGAGAAATCACCGG+AGG | - | chr1.1:76621211-76621230 | None:intergenic | 50.0% | |
GGTGTTTATGATGGTCACGG+TGG | + | chr1.1:76621300-76621319 | MS.gene76824:CDS | 50.0% | |
TAGTCCTCAGATTGCGTCTG+TGG | + | chr1.1:76621949-76621968 | MS.gene76824:CDS | 50.0% | |
TGACAATCCCCCTTGTTCAG+AGG | - | chr1.1:76621855-76621874 | None:intergenic | 50.0% | |
! | ACGCCTTGGATAAGAGGTGT+TGG | - | chr1.1:76621583-76621602 | None:intergenic | 50.0% |
! | GTTTCAAGTCTGTGTGCCAG+AGG | - | chr1.1:76621182-76621201 | None:intergenic | 50.0% |
!! | AACTCTAGAGTCACCCAGGT+TGG | - | chr1.1:76622023-76622042 | None:intergenic | 50.0% |
!! | GAACAACTCTAGAGTCACCC+AGG | - | chr1.1:76622027-76622046 | None:intergenic | 50.0% |
!! | GAGGATCAAGGGCATCATAC+AGG | + | chr1.1:76622198-76622217 | MS.gene76824:CDS | 50.0% |
!! | TCAGTTAGAGGTGCTGCAAG+GGG | + | chr1.1:76622480-76622499 | MS.gene76824:intron | 50.0% |
CCAGACACGCCTTGGATAAG+AGG | - | chr1.1:76621589-76621608 | None:intergenic | 55.0% | |
CCGTGGTGTTTGGAGGATCA+AGG | + | chr1.1:76622186-76622205 | MS.gene76824:CDS | 55.0% | |
CCTCTTATCCAAGGCGTGTC+TGG | + | chr1.1:76621586-76621605 | MS.gene76824:intron | 55.0% | |
GACTTGAAACCTCACGCCTC+CGG | + | chr1.1:76621192-76621211 | MS.gene76824:CDS | 55.0% | |
GATCCCACAGACGCAATCTG+AGG | - | chr1.1:76621956-76621975 | None:intergenic | 55.0% | |
GGCGTTTAGTAAGACCGAGG+AGG | + | chr1.1:76621892-76621911 | MS.gene76824:CDS | 55.0% | |
GTGCCAGAGGAGAAAGTCAG+AGG | - | chr1.1:76621169-76621188 | None:intergenic | 55.0% | |
GTGCCTCTGACTTTCTCCTC+TGG | + | chr1.1:76621163-76621182 | MS.gene76824:CDS | 55.0% | |
TCCAAGGCGTGTCTGGTGTT+TGG | + | chr1.1:76621593-76621612 | MS.gene76824:intron | 55.0% | |
TCTCCTTCCGCCACCTATGT+CGG | + | chr1.1:76621279-76621298 | MS.gene76824:CDS | 55.0% | |
TCTTGGCAATTCCCTGCACG+TGG | - | chr1.1:76622902-76622921 | None:intergenic | 55.0% | |
! | GATTTTTGCTTCCGTCGCCG+TGG | + | chr1.1:76621141-76621160 | MS.gene76824:CDS | 55.0% |
!! | CAGTTAGAGGTGCTGCAAGG+GGG | + | chr1.1:76622481-76622500 | MS.gene76824:intron | 55.0% |
!! | GGAGAAAGTCAGAGGCACCA+CGG | - | chr1.1:76621161-76621180 | None:intergenic | 55.0% |
GCCAAACACCAGACACGCCT+TGG | - | chr1.1:76621597-76621616 | None:intergenic | 60.0% | |
GCTGCAAGGGGGAAATGGTC+TGG | + | chr1.1:76622492-76622511 | MS.gene76824:intron | 60.0% | |
GGAGGCTGTGCGCTTGTCAA+CGG | + | chr1.1:76622084-76622103 | MS.gene76824:CDS | 60.0% | |
! | GAGAAATCACCGGAGGCGTG+AGG | - | chr1.1:76621204-76621223 | None:intergenic | 60.0% |
!! | ACACCGACATAGGTGGCGGA+AGG | - | chr1.1:76621285-76621304 | None:intergenic | 60.0% |
!! | GACATAGGTGGCGGAAGGAG+AGG | - | chr1.1:76621280-76621299 | None:intergenic | 60.0% |
!! | GAGGTGCTGCAAGGGGGAAA+TGG | + | chr1.1:76622487-76622506 | MS.gene76824:intron | 60.0% |
!! | AGTCAGAGGCACCACGGCGA+CGG | - | chr1.1:76621155-76621174 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 76621114 | 76623178 | 76621114 | ID=MS.gene76824 |
chr1.1 | mRNA | 76621114 | 76623178 | 76621114 | ID=MS.gene76824.t1;Parent=MS.gene76824 |
chr1.1 | exon | 76621114 | 76621372 | 76621114 | ID=MS.gene76824.t1.exon1;Parent=MS.gene76824.t1 |
chr1.1 | CDS | 76621114 | 76621372 | 76621114 | ID=cds.MS.gene76824.t1;Parent=MS.gene76824.t1 |
chr1.1 | exon | 76621846 | 76622219 | 76621846 | ID=MS.gene76824.t1.exon2;Parent=MS.gene76824.t1 |
chr1.1 | CDS | 76621846 | 76622219 | 76621846 | ID=cds.MS.gene76824.t1;Parent=MS.gene76824.t1 |
chr1.1 | exon | 76622579 | 76622815 | 76622579 | ID=MS.gene76824.t1.exon3;Parent=MS.gene76824.t1 |
chr1.1 | CDS | 76622579 | 76622815 | 76622579 | ID=cds.MS.gene76824.t1;Parent=MS.gene76824.t1 |
chr1.1 | exon | 76622909 | 76623178 | 76622909 | ID=MS.gene76824.t1.exon4;Parent=MS.gene76824.t1 |
chr1.1 | CDS | 76622909 | 76623178 | 76622909 | ID=cds.MS.gene76824.t1;Parent=MS.gene76824.t1 |
Gene Sequence |
Protein sequence |