Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014805.t1 | XP_024633382.1 | 98.8 | 648 | 8 | 0 | 1 | 648 | 1 | 648 | 0.00E+00 | 1275.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014805.t1 | Q9SUU1 | 67.8 | 659 | 193 | 5 | 4 | 647 | 7 | 661 | 4.3e-262 | 905.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014805.t1 | G7JBM4 | 98.8 | 648 | 8 | 0 | 1 | 648 | 1 | 648 | 0.0e+00 | 1275.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014805 | MS.gene37317 | PPI |
| MS.gene014805 | MS.gene026799 | PPI |
| MS.gene014805 | MS.gene89068 | PPI |
| MS.gene79489 | MS.gene014805 | PPI |
| MS.gene014805 | MS.gene034033 | PPI |
| MS.gene86346 | MS.gene014805 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014805.t1 | MTR_3g107730 | 97.493 | 678 | 8 | 1 | 1 | 669 | 1 | 678 | 0.0 | 1363 |
| MS.gene014805.t1 | MTR_3g107730 | 98.635 | 513 | 7 | 0 | 1 | 513 | 1 | 513 | 0.0 | 1047 |
| MS.gene014805.t1 | MTR_1g011840 | 76.471 | 646 | 148 | 2 | 3 | 647 | 2 | 644 | 0.0 | 1015 |
| MS.gene014805.t1 | MTR_0459s0020 | 69.040 | 646 | 190 | 5 | 4 | 643 | 15 | 656 | 0.0 | 897 |
| MS.gene014805.t1 | MTR_0366s0020 | 62.187 | 640 | 160 | 4 | 4 | 643 | 15 | 572 | 0.0 | 774 |
| MS.gene014805.t1 | MTR_7g110000 | 59.542 | 655 | 242 | 5 | 4 | 644 | 7 | 652 | 0.0 | 765 |
| MS.gene014805.t1 | MTR_2g032690 | 57.562 | 648 | 254 | 4 | 4 | 639 | 7 | 645 | 0.0 | 762 |
| MS.gene014805.t1 | MTR_3g077670 | 58.923 | 650 | 245 | 7 | 4 | 639 | 7 | 648 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014805.t1 | AT4G32510 | 67.265 | 669 | 205 | 5 | 4 | 660 | 7 | 673 | 0.0 | 934 |
| MS.gene014805.t1 | AT4G32510 | 66.915 | 671 | 208 | 5 | 4 | 662 | 7 | 675 | 0.0 | 931 |
| MS.gene014805.t1 | AT5G25430 | 66.462 | 650 | 212 | 2 | 3 | 647 | 8 | 656 | 0.0 | 923 |
| MS.gene014805.t1 | AT1G15460 | 64.732 | 672 | 220 | 4 | 5 | 666 | 13 | 677 | 0.0 | 911 |
| MS.gene014805.t1 | AT1G15460 | 64.732 | 672 | 220 | 4 | 5 | 666 | 13 | 677 | 0.0 | 911 |
| MS.gene014805.t1 | AT1G74810 | 65.443 | 654 | 210 | 4 | 4 | 647 | 12 | 659 | 0.0 | 884 |
| MS.gene014805.t1 | AT1G74810 | 65.443 | 654 | 210 | 4 | 4 | 647 | 12 | 659 | 0.0 | 884 |
| MS.gene014805.t1 | AT1G74810 | 65.443 | 654 | 210 | 4 | 4 | 647 | 12 | 659 | 0.0 | 884 |
| MS.gene014805.t1 | AT1G15460 | 67.810 | 612 | 187 | 2 | 5 | 606 | 13 | 624 | 0.0 | 872 |
| MS.gene014805.t1 | AT1G74810 | 65.600 | 625 | 199 | 4 | 33 | 647 | 9 | 627 | 0.0 | 842 |
| MS.gene014805.t1 | AT1G74810 | 65.600 | 625 | 199 | 4 | 33 | 647 | 9 | 627 | 0.0 | 842 |
| MS.gene014805.t1 | AT3G62270 | 58.185 | 672 | 261 | 6 | 4 | 664 | 7 | 669 | 0.0 | 787 |
| MS.gene014805.t1 | AT2G47160 | 58.780 | 672 | 256 | 6 | 4 | 664 | 7 | 668 | 0.0 | 783 |
| MS.gene014805.t1 | AT2G47160 | 56.671 | 697 | 256 | 7 | 4 | 664 | 7 | 693 | 0.0 | 770 |
| MS.gene014805.t1 | AT1G15460 | 62.630 | 578 | 199 | 4 | 99 | 666 | 1 | 571 | 0.0 | 756 |
| MS.gene014805.t1 | AT3G06450 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 752 |
| MS.gene014805.t1 | AT3G06450 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 752 |
| MS.gene014805.t1 | AT3G06450 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 752 |
| MS.gene014805.t1 | AT3G06450 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 752 |
| MS.gene014805.t1 | AT1G74810 | 63.327 | 559 | 189 | 4 | 99 | 647 | 1 | 553 | 0.0 | 729 |
| MS.gene014805.t1 | AT1G74810 | 63.218 | 522 | 176 | 4 | 136 | 647 | 1 | 516 | 0.0 | 675 |
Find 171 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCCGTGATTTATATATT+TGG | 0.189461 | 3.3:-88070197 | MS.gene014805:CDS |
| CGAGGCTTTATTGCAGATTA+TGG | 0.224792 | 3.3:-88070618 | MS.gene014805:CDS |
| TACCCGTGATTTATATATTT+GGG | 0.228711 | 3.3:-88070196 | MS.gene014805:CDS |
| AGAATTGCAGGGGAGTTATT+TGG | 0.243689 | 3.3:-88071069 | MS.gene014805:CDS |
| GGAATTATTCACTCAATTAT+AGG | 0.251240 | 3.3:-88071395 | MS.gene014805:CDS |
| CTGATTGGTTTATCGATAAT+AGG | 0.284857 | 3.3:-88069368 | MS.gene014805:CDS |
| ATTATAACAGGTTAAAGAAT+TGG | 0.285654 | 3.3:-88069528 | MS.gene014805:intron |
| ATGGCAATTGATAGTCTTCC+TGG | 0.286687 | 3.3:-88069290 | MS.gene014805:CDS |
| CAAAGAGTTTGGCAGTTCTT+AGG | 0.288036 | 3.3:-88069871 | MS.gene014805:CDS |
| GTCTTCCTGGGAATCAGTTC+TGG | 0.288459 | 3.3:-88069277 | MS.gene014805:CDS |
| TTTCTTTCAAGAGGCTATAA+AGG | 0.293379 | 3.3:-88071028 | MS.gene014805:intron |
| TGGTTAGGCTTGAATATCTT+TGG | 0.316056 | 3.3:+88068938 | None:intergenic |
| ATTACTTGTAACGCCGGCTT+GGG | 0.319641 | 3.3:+88069228 | None:intergenic |
| TCTGAGTATGAGGAAATTAT+TGG | 0.320418 | 3.3:-88068896 | MS.gene014805:CDS |
| TTACTATGATGCAGAGATAT+TGG | 0.337001 | 3.3:-88068578 | MS.gene014805:CDS |
| CTTTCGGAGAACAACTTAGT+AGG | 0.339784 | 3.3:-88071472 | MS.gene014805:CDS |
| GCGCTTCCTGTCATTGCTTT+CGG | 0.340497 | 3.3:-88071488 | MS.gene014805:CDS |
| AAAGCAAGATCATGGCGATA+TGG | 0.342725 | 3.3:-88070774 | MS.gene014805:CDS |
| AGTACCAGCTCTGAATTATA+TGG | 0.352987 | 3.3:-88069693 | MS.gene014805:CDS |
| CTTGGCCTTCCTCCTTCAAA+TGG | 0.362198 | 3.3:-88069920 | MS.gene014805:CDS |
| TACCAAGCTCTTTCTAGCTT+GGG | 0.365109 | 3.3:-88071279 | MS.gene014805:CDS |
| AGTGGACAAAACAGCCTTCT+AGG | 0.365772 | 3.3:+88070525 | None:intergenic |
| ACTAGATTTACAAGAATTGC+AGG | 0.384496 | 3.3:-88071081 | MS.gene014805:CDS |
| TCCCATGCATACAAAGAGTT+TGG | 0.386041 | 3.3:-88069882 | MS.gene014805:CDS |
| GTACCAAGCTCTTTCTAGCT+TGG | 0.391627 | 3.3:-88071280 | MS.gene014805:CDS |
| GCAAGCTGTGTTCATTGAAA+TGG | 0.395458 | 3.3:-88069664 | MS.gene014805:CDS |
| TGGGTCTGCGCAATCTGTTC+CGG | 0.400996 | 3.3:-88071633 | MS.gene014805:CDS |
| ATTCAAGCCTAACCATCTTC+AGG | 0.402816 | 3.3:-88068930 | MS.gene014805:CDS |
| CAATCAGGAGGGACTGCAAT+AGG | 0.410300 | 3.3:+88069384 | None:intergenic |
| TAATAATAATGACAGCATAT+TGG | 0.412439 | 3.3:-88071540 | MS.gene014805:intron |
| CTATTGCAGTCCCTCCTGAT+TGG | 0.417106 | 3.3:-88069383 | MS.gene014805:CDS |
| TTCCAAGTGGTGTTCCTAGA+AGG | 0.420451 | 3.3:-88070539 | MS.gene014805:CDS |
| TTAAATGCTATAAACAAGAT+TGG | 0.422231 | 3.3:-88071653 | MS.gene014805:CDS |
| TGTGTTGCAGGGTTTGTGTT+TGG | 0.424941 | 3.3:-88071155 | MS.gene014805:intron |
| GCGCAATCTGTTCCGGCGTT+AGG | 0.439948 | 3.3:-88071626 | MS.gene014805:intron |
| TTTGGCAGTTCTTAGGAGGC+AGG | 0.441887 | 3.3:-88069864 | MS.gene014805:intron |
| TGTAATGAAATCTGATACCA+AGG | 0.445347 | 3.3:-88069489 | MS.gene014805:CDS |
| TGGATGAGATGACAACCAAC+AGG | 0.447214 | 3.3:-88068558 | MS.gene014805:CDS |
| ACACCACTTGGAACGTCGTC+AGG | 0.447750 | 3.3:+88070549 | None:intergenic |
| ACTCTGATATGTGGTCTCCT+TGG | 0.450753 | 3.3:-88069938 | MS.gene014805:CDS |
| TTGTTGTTCCATGCATTCCT+TGG | 0.452125 | 3.3:+88069716 | None:intergenic |
| TTGGCATCTACTGCCATTTG+TGG | 0.452678 | 3.3:-88071416 | MS.gene014805:CDS |
| CTTTGTTCATTAACTCGGAC+TGG | 0.459027 | 3.3:+88069416 | None:intergenic |
| GCAAAGAATATGTAGAAAGT+TGG | 0.461025 | 3.3:+88071515 | None:intergenic |
| AATTACTTGTAACGCCGGCT+TGG | 0.462717 | 3.3:+88069227 | None:intergenic |
| TGAGTGAATAATTCCACAAA+TGG | 0.463157 | 3.3:+88071403 | None:intergenic |
| AGATACACATGCCTCATTTG+TGG | 0.466869 | 3.3:-88069110 | MS.gene014805:CDS |
| ACTTGATGCTTCTGAGTATG+AGG | 0.470967 | 3.3:-88068906 | MS.gene014805:CDS |
| TAAGTATCTATGTATTTCTC+AGG | 0.471983 | 3.3:+88069443 | None:intergenic |
| TGCCAAACTCTTTGTATGCA+TGG | 0.474151 | 3.3:+88069880 | None:intergenic |
| AGAATTATGAGAAGGAAGAA+TGG | 0.475173 | 3.3:+88068977 | None:intergenic |
| AAGCTCTTTCTAGCTTGGGC+TGG | 0.476446 | 3.3:-88071275 | MS.gene014805:CDS |
| TCTTTCTAGCTTGGGCTGGT+TGG | 0.476758 | 3.3:-88071271 | MS.gene014805:intron |
| ATCCATTGGTATACCGCCAT+TGG | 0.477208 | 3.3:+88070850 | None:intergenic |
| ATTCCAGCTTTGATGATAGC+AGG | 0.478040 | 3.3:-88070167 | MS.gene014805:CDS |
| AAGCAAGATCATGGCGATAT+GGG | 0.478179 | 3.3:-88070773 | MS.gene014805:CDS |
| ATGTATTTCTCAGGATCAAA+AGG | 0.479705 | 3.3:+88069452 | None:intergenic |
| TAAATGCTATAAACAAGATT+GGG | 0.483293 | 3.3:-88071652 | MS.gene014805:CDS |
| ATAAAGAGATGCAGGTTCCC+AGG | 0.487430 | 3.3:+88070500 | None:intergenic |
| CAGAAAATATGCCAACTGTA+AGG | 0.487488 | 3.3:+88069051 | None:intergenic |
| TCTTGAATGATTCCCTCAAA+TGG | 0.488582 | 3.3:+88071690 | None:intergenic |
| AATCCAGCTATGGTCTTGAA+TGG | 0.492132 | 3.3:+88069079 | None:intergenic |
| CTCCTAAAATCAACAAAGGT+TGG | 0.498920 | 3.3:+88071369 | None:intergenic |
| TCTTCCTGGGAATCAGTTCT+GGG | 0.500146 | 3.3:-88069276 | MS.gene014805:CDS |
| TAGGCATCTCCGTTATCAAA+AGG | 0.509147 | 3.3:-88069349 | MS.gene014805:CDS |
| GTCCAGTGATAAAGAGATGC+AGG | 0.510174 | 3.3:+88070492 | None:intergenic |
| TAACATGGGAGCACCATTTG+AGG | 0.510206 | 3.3:-88071703 | None:intergenic |
| AACATGGGAGCACCATTTGA+GGG | 0.512969 | 3.3:-88071702 | MS.gene014805:CDS |
| TGTTCTGTTTCGGGGTCACA+TGG | 0.513903 | 3.3:-88069030 | MS.gene014805:CDS |
| GATGCAGGTTCCCAGGGAAG+TGG | 0.514690 | 3.3:+88070507 | None:intergenic |
| TCATTCTTTGTTCATTAACT+CGG | 0.516096 | 3.3:+88069411 | None:intergenic |
| AAACCTGCTATCATCAAAGC+TGG | 0.519396 | 3.3:+88070164 | None:intergenic |
| TTTCGGAGAACAACTTAGTA+GGG | 0.520810 | 3.3:-88071471 | MS.gene014805:CDS |
| AAGCATCAAGTTCCTGAAGA+TGG | 0.521659 | 3.3:+88068918 | None:intergenic |
| GTACCATTCAAGACCATAGC+TGG | 0.525744 | 3.3:-88069082 | MS.gene014805:CDS |
| CAGTACGTAGTATGTCACTC+AGG | 0.526268 | 3.3:-88068862 | MS.gene014805:CDS |
| TCTACAAACTGCAGGATATG+TGG | 0.526801 | 3.3:-88070223 | MS.gene014805:intron |
| AACCTGCATCTCTTTATCAC+TGG | 0.527373 | 3.3:-88070494 | MS.gene014805:CDS |
| CTTCATTGAAGCTGTTACTG+TGG | 0.527596 | 3.3:+88068467 | None:intergenic |
| GTCCACAACACTACCATCAC+TGG | 0.527804 | 3.3:+88070591 | None:intergenic |
| AGGTTCCATTGCACAACCCT+TGG | 0.529505 | 3.3:+88069472 | None:intergenic |
| TCAAGTTCCTGAAGATGGTT+AGG | 0.529736 | 3.3:+88068923 | None:intergenic |
| CTATTATCGATAAACCAATC+AGG | 0.530355 | 3.3:+88069369 | None:intergenic |
| TGCCCCAAATATATAAATCA+CGG | 0.532143 | 3.3:+88070193 | None:intergenic |
| GCCAAACTCTTTGTATGCAT+GGG | 0.535179 | 3.3:+88069881 | None:intergenic |
| AAGTTTCAACTCTCCCCTGT+TGG | 0.535774 | 3.3:+88068543 | None:intergenic |
| ATTTGCAGCTGATCCGAAAG+AGG | 0.538031 | 3.3:-88069752 | MS.gene014805:intron |
| CTTTCCCAGAACTGATTCCC+AGG | 0.538850 | 3.3:+88069272 | None:intergenic |
| TGTGGAAGGACTCCATTTGA+AGG | 0.542425 | 3.3:+88069908 | None:intergenic |
| AGCCCAAGCTAGAAAGAGCT+TGG | 0.543809 | 3.3:+88071277 | None:intergenic |
| TTCCAGTGATGGTAGTGTTG+TGG | 0.547605 | 3.3:-88070593 | MS.gene014805:CDS |
| TAAGTGTACATTATAACAGT+TGG | 0.548681 | 3.3:+88071338 | None:intergenic |
| TTGCAGGGTTTGTGTTTGGA+CGG | 0.549975 | 3.3:-88071151 | MS.gene014805:intron |
| TCCTCTTCGTCACCCCAAGC+CGG | 0.550263 | 3.3:-88069241 | MS.gene014805:CDS |
| GCCCCAAATATATAAATCAC+GGG | 0.551841 | 3.3:+88070194 | None:intergenic |
| ACCCGTGATTTATATATTTG+GGG | 0.552067 | 3.3:-88070195 | MS.gene014805:CDS |
| TTCCAATGGCGGTATACCAA+TGG | 0.553783 | 3.3:-88070852 | MS.gene014805:CDS |
| TCATAGCGTGGCTTCTCAGA+TGG | 0.555026 | 3.3:-88070129 | MS.gene014805:CDS |
| AGAGTTTGGCAGTTCTTAGG+AGG | 0.556567 | 3.3:-88069868 | MS.gene014805:CDS |
| AGCCTTCTAGGAACACCACT+TGG | 0.556893 | 3.3:+88070537 | None:intergenic |
| TAGGCTTGAATATCTTTGGA+AGG | 0.557117 | 3.3:+88068942 | None:intergenic |
| AAAGCAGAAAAGCAAGATCA+TGG | 0.557963 | 3.3:-88070782 | MS.gene014805:CDS |
| AAGAGCTTGGTACCCAATTG+AGG | 0.560363 | 3.3:+88071290 | None:intergenic |
| GACATACTACGTACTGCAGA+TGG | 0.563507 | 3.3:+88068869 | None:intergenic |
| TGGATTTACAGCCTTACAGT+TGG | 0.564075 | 3.3:-88069062 | MS.gene014805:CDS |
| CCACGTGATAGTGATAATGA+TGG | 0.565884 | 3.3:-88068613 | MS.gene014805:CDS |
| ATGAGAAGGAAGAATGGTAG+CGG | 0.566015 | 3.3:+88068983 | None:intergenic |
| AATTGCAATTCCTCCGACGA+AGG | 0.567377 | 3.3:+88070873 | None:intergenic |
| TGTTCTCCGAAAGCAATGAC+AGG | 0.569284 | 3.3:+88071482 | None:intergenic |
| CTGGGAATCAGTTCTGGGAA+AGG | 0.571040 | 3.3:-88069271 | MS.gene014805:CDS |
| CTTGAGCACTGTAGAAACAT+TGG | 0.571302 | 3.3:-88071435 | MS.gene014805:CDS |
| AATGACTGCGAGTAATCCAT+TGG | 0.572971 | 3.3:+88070836 | None:intergenic |
| TAGGAAAACATCATAGTGGT+AGG | 0.575777 | 3.3:+88070070 | None:intergenic |
| TGATACCAAGGGTTGTGCAA+TGG | 0.575807 | 3.3:-88069477 | MS.gene014805:CDS |
| TGGTACTGTCTCCACAAATG+AGG | 0.576656 | 3.3:+88069099 | None:intergenic |
| CAGGAGGGACTGCAATAGGT+TGG | 0.576763 | 3.3:+88069388 | None:intergenic |
| ACATCATAGTGGTAGGCAGA+TGG | 0.583942 | 3.3:+88070077 | None:intergenic |
| GGAATCATTCAAGATGTCAA+AGG | 0.583983 | 3.3:-88071681 | MS.gene014805:CDS |
| TATCCCCATAAAACCGAGGT+AGG | 0.584080 | 3.3:+88069323 | None:intergenic |
| AGATTATGGTGTTCCAGTGA+TGG | 0.584710 | 3.3:-88070604 | MS.gene014805:CDS |
| CGGAGGAATTGCAATTCCAA+TGG | 0.585619 | 3.3:-88070866 | MS.gene014805:CDS |
| GCCGGCTTGGGGTGACGAAG+AGG | 0.586471 | 3.3:+88069240 | None:intergenic |
| GGACTCCATTTGAAGGAGGA+AGG | 0.587102 | 3.3:+88069915 | None:intergenic |
| CTAGATTTACAAGAATTGCA+GGG | 0.588173 | 3.3:-88071080 | MS.gene014805:CDS |
| AGTCTTTAGACTCTGATATG+TGG | 0.592532 | 3.3:-88069947 | MS.gene014805:intron |
| TGGCAATTGATAGTCTTCCT+GGG | 0.593727 | 3.3:-88069289 | MS.gene014805:CDS |
| GAAAAGCGCCAAGGAATGCA+TGG | 0.594390 | 3.3:-88069724 | MS.gene014805:CDS |
| TTTGCAGCTGATCCGAAAGA+GGG | 0.595342 | 3.3:-88069751 | MS.gene014805:intron |
| TAAGGCTGTAAATCCAGCTA+TGG | 0.595564 | 3.3:+88069069 | None:intergenic |
| TAGTGATAATGATGGAAGCT+CGG | 0.596596 | 3.3:-88068605 | MS.gene014805:CDS |
| TACTCAATTACTTGTAACGC+CGG | 0.600590 | 3.3:+88069222 | None:intergenic |
| GCTTGAATATCTTTGGAAGG+AGG | 0.601711 | 3.3:+88068945 | None:intergenic |
| AGGCGAGTTCAGCACTCCCA+AGG | 0.604329 | 3.3:-88070904 | MS.gene014805:CDS |
| TTTGAACCACAGGGACTGGT+AGG | 0.604416 | 3.3:-88070924 | MS.gene014805:intron |
| GGAAACAATATTCCACCTAT+CGG | 0.607030 | 3.3:+88069004 | None:intergenic |
| GATCATTGAAGCTGTTACTG+CGG | 0.608964 | 3.3:+88068494 | None:intergenic |
| ATTATTCACTCAATTATAGG+TGG | 0.609337 | 3.3:-88071392 | MS.gene014805:CDS |
| CAAGGTTGAAAATCCTTCGT+CGG | 0.611167 | 3.3:-88070886 | MS.gene014805:CDS |
| TGAATTAAATTACCTAACGC+CGG | 0.611783 | 3.3:+88071614 | None:intergenic |
| GGATGAGATGACAACCAACA+GGG | 0.624263 | 3.3:-88068557 | MS.gene014805:CDS |
| TAAAGAGATGCAGGTTCCCA+GGG | 0.625123 | 3.3:+88070501 | None:intergenic |
| GTTCTCTGAGAATTATGAGA+AGG | 0.627074 | 3.3:+88068969 | None:intergenic |
| TTATCACTGGACAGTAGTGA+AGG | 0.627297 | 3.3:-88070481 | MS.gene014805:intron |
| CAAGTAGGAAAACATCATAG+TGG | 0.629656 | 3.3:+88070066 | None:intergenic |
| CAACTTAGTAGGGATACAGA+TGG | 0.633505 | 3.3:-88071461 | MS.gene014805:CDS |
| TAGATTTACAAGAATTGCAG+GGG | 0.635506 | 3.3:-88071079 | MS.gene014805:CDS |
| GGTTGAAAATCCTTCGTCGG+AGG | 0.639194 | 3.3:-88070883 | MS.gene014805:CDS |
| GGGGTCACATGGATACCGAT+AGG | 0.640094 | 3.3:-88069019 | MS.gene014805:CDS |
| TTTGTATGCATGGGAGACTG+TGG | 0.640494 | 3.3:+88069890 | None:intergenic |
| TTCAATTCAGGGAGGCTACG+AGG | 0.640834 | 3.3:-88070636 | MS.gene014805:intron |
| TATCAAAAGGATACCTACCT+CGG | 0.648218 | 3.3:-88069336 | MS.gene014805:CDS |
| TTATCGATAAACCAATCAGG+AGG | 0.649930 | 3.3:+88069372 | None:intergenic |
| TTACTTGTAACGCCGGCTTG+GGG | 0.651277 | 3.3:+88069229 | None:intergenic |
| CAAACTGCAGGATATGTGGA+AGG | 0.653071 | 3.3:-88070219 | MS.gene014805:intron |
| GCAACTCCTAAAATCAACAA+AGG | 0.653603 | 3.3:+88071365 | None:intergenic |
| CATTTGAAGGAGGAAGGCCA+AGG | 0.657670 | 3.3:+88069921 | None:intergenic |
| GTCACATGGATACCGATAGG+TGG | 0.659868 | 3.3:-88069016 | MS.gene014805:CDS |
| AACAGACCATTATTCCAAGT+AGG | 0.662683 | 3.3:+88070051 | None:intergenic |
| TATCGATAAACCAATCAGGA+GGG | 0.666981 | 3.3:+88069373 | None:intergenic |
| GAAAGCAATGACAGGAAGCG+CGG | 0.670114 | 3.3:+88071490 | None:intergenic |
| ATGCCTGACGACGTTCCAAG+TGG | 0.671559 | 3.3:-88070552 | MS.gene014805:CDS |
| AGGAATTGCAATTCCAATGG+CGG | 0.673504 | 3.3:-88070863 | MS.gene014805:CDS |
| AGTACGTAGTATGTCACTCA+GGG | 0.676575 | 3.3:-88068861 | MS.gene014805:intron |
| GGAAGGACTCCATTTGAAGG+AGG | 0.676893 | 3.3:+88069911 | None:intergenic |
| TATGCATGGGAGACTGTGGA+AGG | 0.677272 | 3.3:+88069894 | None:intergenic |
| GTAATGAAATCTGATACCAA+GGG | 0.682765 | 3.3:-88069488 | MS.gene014805:CDS |
| AAAATATCCCCATAAAACCG+AGG | 0.688473 | 3.3:+88069319 | None:intergenic |
| GAGGGTTGTGAAAAGCGCCA+AGG | 0.688617 | 3.3:-88069733 | MS.gene014805:CDS |
| CCTAACAATACATACAGTAG+GGG | 0.689459 | 3.3:+88069635 | None:intergenic |
| CCATCATTATCACTATCACG+TGG | 0.692316 | 3.3:+88068613 | None:intergenic |
| GATGAGATGACAACCAACAG+GGG | 0.715278 | 3.3:-88068556 | MS.gene014805:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATGCTTAAATATATTTT+TGG | + | chr3.3:88071444-88071463 | None:intergenic | 10.0% |
| !! | AAATACATTGTGTATTTAAT+TGG | - | chr3.3:88069184-88069203 | MS.gene014805:intron | 15.0% |
| !! | ATTCTTTAAATTTCTGTTTA+AGG | - | chr3.3:88068923-88068942 | MS.gene014805:CDS | 15.0% |
| !! | TTCTTTAAATTTCTGTTTAA+GGG | - | chr3.3:88068924-88068943 | MS.gene014805:CDS | 15.0% |
| !!! | ATGTATAAAAAAAAGCATTT+TGG | + | chr3.3:88069734-88069753 | None:intergenic | 15.0% |
| !!! | TTCTTATTTTTGTTAGAAAA+AGG | + | chr3.3:88069165-88069184 | None:intergenic | 15.0% |
| !! | ATAACATAAATCCAAATTCT+AGG | + | chr3.3:88070140-88070159 | None:intergenic | 20.0% |
| !! | ATTATAACAGGTTAAAGAAT+TGG | - | chr3.3:88070624-88070643 | MS.gene014805:CDS | 20.0% |
| !! | CTACATTGAAAAAAAAGTTT+AGG | + | chr3.3:88070964-88070983 | None:intergenic | 20.0% |
| !! | TAAATGCTATAAACAAGATT+GGG | - | chr3.3:88068500-88068519 | MS.gene014805:CDS | 20.0% |
| !! | TAATAATAATGACAGCATAT+TGG | - | chr3.3:88068612-88068631 | MS.gene014805:CDS | 20.0% |
| !! | TTAAATGCTATAAACAAGAT+TGG | - | chr3.3:88068499-88068518 | MS.gene014805:CDS | 20.0% |
| !!! | ACGTTAAGCAATTTTTTTTT+TGG | - | chr3.3:88069439-88069458 | MS.gene014805:CDS | 20.0% |
| !!! | CGTTAAGCAATTTTTTTTTT+GGG | - | chr3.3:88069440-88069459 | MS.gene014805:CDS | 20.0% |
| !!! | GTTGGTTTTTAAATTATAAC+AGG | - | chr3.3:88070612-88070631 | MS.gene014805:CDS | 20.0% |
| ! | AATGCAAGAATAAAGATCAT+TGG | + | chr3.3:88069497-88069516 | None:intergenic | 25.0% |
| ! | ATTATTCACTCAATTATAGG+TGG | - | chr3.3:88068760-88068779 | MS.gene014805:intron | 25.0% |
| ! | GATTGACATAATTATCTCTA+TGG | - | chr3.3:88070180-88070199 | MS.gene014805:CDS | 25.0% |
| ! | GGAATTATTCACTCAATTAT+AGG | - | chr3.3:88068757-88068776 | MS.gene014805:intron | 25.0% |
| ! | GTTAGACTTATATGGATATT+AGG | + | chr3.3:88069905-88069924 | None:intergenic | 25.0% |
| ! | TAAGTATCTATGTATTTCTC+AGG | + | chr3.3:88070712-88070731 | None:intergenic | 25.0% |
| ! | TAAGTGTACATTATAACAGT+TGG | + | chr3.3:88068817-88068836 | None:intergenic | 25.0% |
| ! | TACCCGTGATTTATATATTT+GGG | - | chr3.3:88069956-88069975 | MS.gene014805:intron | 25.0% |
| ! | TATTCTTGCATTTCAATTCA+GGG | - | chr3.3:88069505-88069524 | MS.gene014805:CDS | 25.0% |
| ! | TCATTCTTTGTTCATTAACT+CGG | + | chr3.3:88070744-88070763 | None:intergenic | 25.0% |
| ! | TTATTCTTGCATTTCAATTC+AGG | - | chr3.3:88069504-88069523 | MS.gene014805:CDS | 25.0% |
| !! | CTAATGTGATATTGGATTTT+TGG | + | chr3.3:88069419-88069438 | None:intergenic | 25.0% |
| !!! | AGTCGTGATCATTTTAATTT+AGG | - | chr3.3:88069874-88069893 | MS.gene014805:CDS | 25.0% |
| !!! | TTTGTTTTCTTCCTAGAATT+TGG | - | chr3.3:88070126-88070145 | MS.gene014805:CDS | 25.0% |
| AACCTAACAATACATACAGT+AGG | + | chr3.3:88070522-88070541 | None:intergenic | 30.0% | |
| ACAAAAATTGTTTGAACCAC+AGG | - | chr3.3:88069218-88069237 | MS.gene014805:intron | 30.0% | |
| ACACCTTGAATATTAAGTGT+TGG | + | chr3.3:88069810-88069829 | None:intergenic | 30.0% | |
| ACCAAATTCAAATCCTAAGT+TGG | + | chr3.3:88071503-88071522 | None:intergenic | 30.0% | |
| ACCCGTGATTTATATATTTG+GGG | - | chr3.3:88069957-88069976 | MS.gene014805:intron | 30.0% | |
| ACCTAACAATACATACAGTA+GGG | + | chr3.3:88070521-88070540 | None:intergenic | 30.0% | |
| ACTAGATTTACAAGAATTGC+AGG | - | chr3.3:88069071-88069090 | MS.gene014805:CDS | 30.0% | |
| AGAATTATGAGAAGGAAGAA+TGG | + | chr3.3:88071178-88071197 | None:intergenic | 30.0% | |
| ATGTATTTCTCAGGATCAAA+AGG | + | chr3.3:88070703-88070722 | None:intergenic | 30.0% | |
| CAAAAATTGTTTGAACCACA+GGG | - | chr3.3:88069219-88069238 | MS.gene014805:intron | 30.0% | |
| CTAGATTTACAAGAATTGCA+GGG | - | chr3.3:88069072-88069091 | MS.gene014805:CDS | 30.0% | |
| CTATTATCGATAAACCAATC+AGG | + | chr3.3:88070786-88070805 | None:intergenic | 30.0% | |
| CTTAACGTCTAATGTGATAT+TGG | + | chr3.3:88069427-88069446 | None:intergenic | 30.0% | |
| GAAAAAAAAGTTTAGGCACA+AGG | + | chr3.3:88070957-88070976 | None:intergenic | 30.0% | |
| GATACTAATACACATAGTGT+TGG | - | chr3.3:88070594-88070613 | MS.gene014805:CDS | 30.0% | |
| GCAAAGAATATGTAGAAAGT+TGG | + | chr3.3:88068640-88068659 | None:intergenic | 30.0% | |
| GTAATGAAATCTGATACCAA+GGG | - | chr3.3:88070664-88070683 | MS.gene014805:intron | 30.0% | |
| GTACCCGTGATTTATATATT+TGG | - | chr3.3:88069955-88069974 | MS.gene014805:intron | 30.0% | |
| TAAAGATCATTGGAGTGATA+AGG | + | chr3.3:88069487-88069506 | None:intergenic | 30.0% | |
| TAGAAGCTGTTAGACTTATA+TGG | + | chr3.3:88069913-88069932 | None:intergenic | 30.0% | |
| TAGATTTACAAGAATTGCAG+GGG | - | chr3.3:88069073-88069092 | MS.gene014805:CDS | 30.0% | |
| TCCAACTTAGGATTTGAATT+TGG | - | chr3.3:88071499-88071518 | MS.gene014805:CDS | 30.0% | |
| TCTGAGTATGAGGAAATTAT+TGG | - | chr3.3:88071256-88071275 | MS.gene014805:intron | 30.0% | |
| TGAATTAAATTACCTAACGC+CGG | + | chr3.3:88068541-88068560 | None:intergenic | 30.0% | |
| TGAGTGAATAATTCCACAAA+TGG | + | chr3.3:88068752-88068771 | None:intergenic | 30.0% | |
| TGCAAAAATACACCTCAATT+GGG | - | chr3.3:88068850-88068869 | MS.gene014805:intron | 30.0% | |
| TGCCCCAAATATATAAATCA+CGG | + | chr3.3:88069962-88069981 | None:intergenic | 30.0% | |
| TGTAATGAAATCTGATACCA+AGG | - | chr3.3:88070663-88070682 | MS.gene014805:intron | 30.0% | |
| TTACTATGATGCAGAGATAT+TGG | - | chr3.3:88071574-88071593 | MS.gene014805:intron | 30.0% | |
| TTGAGAAGAAATTAAGAACC+AGG | + | chr3.3:88070343-88070362 | None:intergenic | 30.0% | |
| TTTCTTTCAAGAGGCTATAA+AGG | - | chr3.3:88069124-88069143 | MS.gene014805:intron | 30.0% | |
| ! | ACGAACATTTTAGATCGATA+CGG | + | chr3.3:88068974-88068993 | None:intergenic | 30.0% |
| ! | ATATTTTCTGTTCTGTTTCG+GGG | - | chr3.3:88071114-88071133 | MS.gene014805:CDS | 30.0% |
| ! | CATATTTTCTGTTCTGTTTC+GGG | - | chr3.3:88071113-88071132 | MS.gene014805:CDS | 30.0% |
| ! | CATCGATATATTTTGCATCA+AGG | - | chr3.3:88070315-88070334 | MS.gene014805:intron | 30.0% |
| ! | GCATATTTTCTGTTCTGTTT+CGG | - | chr3.3:88071112-88071131 | MS.gene014805:CDS | 30.0% |
| ! | GTCATTGTCTTGTATGTTTT+GGG | - | chr3.3:88071007-88071026 | MS.gene014805:intron | 30.0% |
| ! | TGTCATTGTCTTGTATGTTT+TGG | - | chr3.3:88071006-88071025 | MS.gene014805:intron | 30.0% |
| ! | TGTTTTCCTACTTGGAATAA+TGG | - | chr3.3:88070095-88070114 | MS.gene014805:CDS | 30.0% |
| ! | TTTTCCATATAATTCAGAGC+TGG | + | chr3.3:88070466-88070485 | None:intergenic | 30.0% |
| !! | CTGATTGGTTTATCGATAAT+AGG | - | chr3.3:88070784-88070803 | MS.gene014805:CDS | 30.0% |
| AAAATATCCCCATAAAACCG+AGG | + | chr3.3:88070836-88070855 | None:intergenic | 35.0% | |
| AAAGCAGAAAAGCAAGATCA+TGG | - | chr3.3:88069370-88069389 | MS.gene014805:CDS | 35.0% | |
| AACAGACCATTATTCCAAGT+AGG | + | chr3.3:88070104-88070123 | None:intergenic | 35.0% | |
| AATGTTCGTATTTGTGTTGC+AGG | - | chr3.3:88068985-88069004 | MS.gene014805:CDS | 35.0% | |
| AGTCTTTAGACTCTGATATG+TGG | - | chr3.3:88070205-88070224 | MS.gene014805:CDS | 35.0% | |
| ATGTTCGTATTTGTGTTGCA+GGG | - | chr3.3:88068986-88069005 | MS.gene014805:CDS | 35.0% | |
| CAAGTAGGAAAACATCATAG+TGG | + | chr3.3:88070089-88070108 | None:intergenic | 35.0% | |
| CAGAAAATATGCCAACTGTA+AGG | + | chr3.3:88071104-88071123 | None:intergenic | 35.0% | |
| CCTAACAATACATACAGTAG+GGG | + | chr3.3:88070520-88070539 | None:intergenic | 35.0% | |
| CTCCTAAAATCAACAAAGGT+TGG | + | chr3.3:88068786-88068805 | None:intergenic | 35.0% | |
| CTCTACAGACATACATTACA+TGG | + | chr3.3:88069785-88069804 | None:intergenic | 35.0% | |
| CTGCAAAAATACACCTCAAT+TGG | - | chr3.3:88068849-88068868 | MS.gene014805:intron | 35.0% | |
| GAATTTGGTTGATCAGGATA+GGG | - | chr3.3:88071514-88071533 | MS.gene014805:CDS | 35.0% | |
| GCAACTCCTAAAATCAACAA+AGG | + | chr3.3:88068790-88068809 | None:intergenic | 35.0% | |
| GCACCAACACTTAATATTCA+AGG | - | chr3.3:88069804-88069823 | MS.gene014805:intron | 35.0% | |
| GCCCCAAATATATAAATCAC+GGG | + | chr3.3:88069961-88069980 | None:intergenic | 35.0% | |
| GGAAACAATATTCCACCTAT+CGG | + | chr3.3:88071151-88071170 | None:intergenic | 35.0% | |
| GGAATCATTCAAGATGTCAA+AGG | - | chr3.3:88068471-88068490 | MS.gene014805:CDS | 35.0% | |
| GGATTTGAATTTGGTTGATC+AGG | - | chr3.3:88071508-88071527 | MS.gene014805:CDS | 35.0% | |
| TACTCAATTACTTGTAACGC+CGG | + | chr3.3:88070933-88070952 | None:intergenic | 35.0% | |
| TAGGAAAACATCATAGTGGT+AGG | + | chr3.3:88070085-88070104 | None:intergenic | 35.0% | |
| TAGGCTTGAATATCTTTGGA+AGG | + | chr3.3:88071213-88071232 | None:intergenic | 35.0% | |
| TATCAAAAGGATACCTACCT+CGG | - | chr3.3:88070816-88070835 | MS.gene014805:CDS | 35.0% | |
| TATCGATAAACCAATCAGGA+GGG | + | chr3.3:88070782-88070801 | None:intergenic | 35.0% | |
| TCTTGAATGATTCCCTCAAA+TGG | + | chr3.3:88068465-88068484 | None:intergenic | 35.0% | |
| TGAATTTGGTTGATCAGGAT+AGG | - | chr3.3:88071513-88071532 | MS.gene014805:CDS | 35.0% | |
| TGGTTAGGCTTGAATATCTT+TGG | + | chr3.3:88071217-88071236 | None:intergenic | 35.0% | |
| TTATCGATAAACCAATCAGG+AGG | + | chr3.3:88070783-88070802 | None:intergenic | 35.0% | |
| TTTCGGAGAACAACTTAGTA+GGG | - | chr3.3:88068681-88068700 | MS.gene014805:intron | 35.0% | |
| ! | AAATCCTAAGTTGGAAAGCT+TGG | + | chr3.3:88071494-88071513 | None:intergenic | 35.0% |
| ! | ATGGGGATATTTTGCTTACA+TGG | - | chr3.3:88070843-88070862 | MS.gene014805:CDS | 35.0% |
| ! | CACTATGATGTTTTCCTACT+TGG | - | chr3.3:88070087-88070106 | MS.gene014805:CDS | 35.0% |
| ! | CACTGTTCTTTTCTTTCAAG+AGG | - | chr3.3:88069115-88069134 | MS.gene014805:CDS | 35.0% |
| ! | GGTAGGTATCCTTTTGATAA+CGG | + | chr3.3:88070815-88070834 | None:intergenic | 35.0% |
| ! | GTTCTCTGAGAATTATGAGA+AGG | + | chr3.3:88071186-88071205 | None:intergenic | 35.0% |
| ! | TAGTGATAATGATGGAAGCT+CGG | - | chr3.3:88071547-88071566 | MS.gene014805:intron | 35.0% |
| !! | AGTACCAGCTCTGAATTATA+TGG | - | chr3.3:88070459-88070478 | MS.gene014805:intron | 35.0% |
| !! | TCGCAGTCATTTTCTCTTTT+GGG | - | chr3.3:88069328-88069347 | MS.gene014805:CDS | 35.0% |
| !!! | ATACTTTTTCGATCATAGCG+TGG | - | chr3.3:88070011-88070030 | MS.gene014805:intron | 35.0% |
| AAACCTGCTATCATCAAAGC+TGG | + | chr3.3:88069991-88070010 | None:intergenic | 40.0% | |
| AAAGCAAGATCATGGCGATA+TGG | - | chr3.3:88069378-88069397 | MS.gene014805:CDS | 40.0% | |
| AACCTGCATCTCTTTATCAC+TGG | - | chr3.3:88069658-88069677 | MS.gene014805:CDS | 40.0% | |
| AAGCAAGATCATGGCGATAT+GGG | - | chr3.3:88069379-88069398 | MS.gene014805:CDS | 40.0% | |
| AAGCATCAAGTTCCTGAAGA+TGG | + | chr3.3:88071237-88071256 | None:intergenic | 40.0% | |
| AATGACTGCGAGTAATCCAT+TGG | + | chr3.3:88069319-88069338 | None:intergenic | 40.0% | |
| ACTTGATGCTTCTGAGTATG+AGG | - | chr3.3:88071246-88071265 | MS.gene014805:intron | 40.0% | |
| AGAATTGCAGGGGAGTTATT+TGG | - | chr3.3:88069083-88069102 | MS.gene014805:CDS | 40.0% | |
| AGATACACATGCCTCATTTG+TGG | - | chr3.3:88071042-88071061 | MS.gene014805:CDS | 40.0% | |
| AGATTATGGTGTTCCAGTGA+TGG | - | chr3.3:88069548-88069567 | MS.gene014805:intron | 40.0% | |
| AGGAATTGCAATTCCAATGG+CGG | - | chr3.3:88069289-88069308 | MS.gene014805:CDS | 40.0% | |
| AGTACGTAGTATGTCACTCA+GGG | - | chr3.3:88071291-88071310 | MS.gene014805:CDS | 40.0% | |
| ATGAGAAGGAAGAATGGTAG+CGG | + | chr3.3:88071172-88071191 | None:intergenic | 40.0% | |
| ATTCAAGCCTAACCATCTTC+AGG | - | chr3.3:88071222-88071241 | MS.gene014805:intron | 40.0% | |
| CAAAGAGTTTGGCAGTTCTT+AGG | - | chr3.3:88070281-88070300 | MS.gene014805:intron | 40.0% | |
| CAAATCAATGGTGCAACACA+AGG | + | chr3.3:88070385-88070404 | None:intergenic | 40.0% | |
| CAACTTAGTAGGGATACAGA+TGG | - | chr3.3:88068691-88068710 | MS.gene014805:intron | 40.0% | |
| CAAGGTTGAAAATCCTTCGT+CGG | - | chr3.3:88069266-88069285 | MS.gene014805:CDS | 40.0% | |
| CACTAACACGTGTCATACAT+CGG | + | chr3.3:88069835-88069854 | None:intergenic | 40.0% | |
| CCATCATTATCACTATCACG+TGG | + | chr3.3:88071542-88071561 | None:intergenic | 40.0% | |
| CCCCTACTGTATGTATTGTT+AGG | - | chr3.3:88070517-88070536 | MS.gene014805:CDS | 40.0% | |
| CTTCATTGAAGCTGTTACTG+TGG | + | chr3.3:88071688-88071707 | None:intergenic | 40.0% | |
| CTTTCGGAGAACAACTTAGT+AGG | - | chr3.3:88068680-88068699 | MS.gene014805:intron | 40.0% | |
| CTTTGTTCATTAACTCGGAC+TGG | + | chr3.3:88070739-88070758 | None:intergenic | 40.0% | |
| GATCATTGAAGCTGTTACTG+CGG | + | chr3.3:88071661-88071680 | None:intergenic | 40.0% | |
| GCAAGCTGTGTTCATTGAAA+TGG | - | chr3.3:88070488-88070507 | MS.gene014805:CDS | 40.0% | |
| GCCAAACTCTTTGTATGCAT+GGG | + | chr3.3:88070274-88070293 | None:intergenic | 40.0% | |
| TAACAGCTTCTACAAACTGC+AGG | - | chr3.3:88069921-88069940 | MS.gene014805:CDS | 40.0% | |
| TAAGGCTGTAAATCCAGCTA+TGG | + | chr3.3:88071086-88071105 | None:intergenic | 40.0% | |
| TACTCCAAGCTTTCCAACTT+AGG | - | chr3.3:88071487-88071506 | MS.gene014805:CDS | 40.0% | |
| TAGGCATCTCCGTTATCAAA+AGG | - | chr3.3:88070803-88070822 | MS.gene014805:CDS | 40.0% | |
| TCAAGTTCCTGAAGATGGTT+AGG | + | chr3.3:88071232-88071251 | None:intergenic | 40.0% | |
| TCCCATGCATACAAAGAGTT+TGG | - | chr3.3:88070270-88070289 | MS.gene014805:intron | 40.0% | |
| TCTACAAACTGCAGGATATG+TGG | - | chr3.3:88069929-88069948 | MS.gene014805:CDS | 40.0% | |
| TCTTGCATTTCAATTCAGGG+AGG | - | chr3.3:88069508-88069527 | MS.gene014805:CDS | 40.0% | |
| TGCCAAACTCTTTGTATGCA+TGG | + | chr3.3:88070275-88070294 | None:intergenic | 40.0% | |
| TGGATTTACAGCCTTACAGT+TGG | - | chr3.3:88071090-88071109 | MS.gene014805:CDS | 40.0% | |
| TTATCACTGGACAGTAGTGA+AGG | - | chr3.3:88069671-88069690 | MS.gene014805:CDS | 40.0% | |
| ! | AATCCAGCTATGGTCTTGAA+TGG | + | chr3.3:88071076-88071095 | None:intergenic | 40.0% |
| ! | ATATTTTGCATCAAGGCTCC+TGG | - | chr3.3:88070322-88070341 | MS.gene014805:intron | 40.0% |
| ! | ATGGCAATTGATAGTCTTCC+TGG | - | chr3.3:88070862-88070881 | MS.gene014805:CDS | 40.0% |
| ! | ATTCCAGCTTTGATGATAGC+AGG | - | chr3.3:88069985-88070004 | MS.gene014805:intron | 40.0% |
| ! | CCACGTGATAGTGATAATGA+TGG | - | chr3.3:88071539-88071558 | MS.gene014805:intron | 40.0% |
| ! | CTTGAGCACTGTAGAAACAT+TGG | - | chr3.3:88068717-88068736 | MS.gene014805:intron | 40.0% |
| ! | GACGAAGGATTTTCAACCTT+GGG | + | chr3.3:88069267-88069286 | None:intergenic | 40.0% |
| ! | GCTTGAATATCTTTGGAAGG+AGG | + | chr3.3:88071210-88071229 | None:intergenic | 40.0% |
| ! | TGGCAATTGATAGTCTTCCT+GGG | - | chr3.3:88070863-88070882 | MS.gene014805:CDS | 40.0% |
| ! | TTGTTGTTCCATGCATTCCT+TGG | + | chr3.3:88070439-88070458 | None:intergenic | 40.0% |
| !! | ATACCTACCTCGGTTTTATG+GGG | - | chr3.3:88070826-88070845 | MS.gene014805:CDS | 40.0% |
| !! | CGAGGCTTTATTGCAGATTA+TGG | - | chr3.3:88069534-88069553 | MS.gene014805:intron | 40.0% |
| !! | CTCGCAGTCATTTTCTCTTT+TGG | - | chr3.3:88069327-88069346 | MS.gene014805:CDS | 40.0% |
| !! | GATACCTACCTCGGTTTTAT+GGG | - | chr3.3:88070825-88070844 | MS.gene014805:CDS | 40.0% |
| !! | TACCAAGCTCTTTCTAGCTT+GGG | - | chr3.3:88068873-88068892 | MS.gene014805:CDS | 40.0% |
| !!! | GGCCAACCTTTGTTGATTTT+AGG | - | chr3.3:88068781-88068800 | MS.gene014805:intron | 40.0% |
| AAGAGCTTGGTACCCAATTG+AGG | + | chr3.3:88068865-88068884 | None:intergenic | 45.0% | |
| AAGTTTCAACTCTCCCCTGT+TGG | + | chr3.3:88071612-88071631 | None:intergenic | 45.0% | |
| AATTGCAATTCCTCCGACGA+AGG | + | chr3.3:88069282-88069301 | None:intergenic | 45.0% | |
| ACATCATAGTGGTAGGCAGA+TGG | + | chr3.3:88070078-88070097 | None:intergenic | 45.0% | |
| ACTCTGATATGTGGTCTCCT+TGG | - | chr3.3:88070214-88070233 | MS.gene014805:intron | 45.0% | |
| AGAGTTTGGCAGTTCTTAGG+AGG | - | chr3.3:88070284-88070303 | MS.gene014805:intron | 45.0% | |
| AGTGGACAAAACAGCCTTCT+AGG | + | chr3.3:88069630-88069649 | None:intergenic | 45.0% | |
| ATAAAGAGATGCAGGTTCCC+AGG | + | chr3.3:88069655-88069674 | None:intergenic | 45.0% | |
| ATCCATTGGTATACCGCCAT+TGG | + | chr3.3:88069305-88069324 | None:intergenic | 45.0% | |
| ATTGTTTGAACCACAGGGAC+TGG | - | chr3.3:88069224-88069243 | MS.gene014805:intron | 45.0% | |
| ATTTGCAGCTGATCCGAAAG+AGG | - | chr3.3:88070400-88070419 | MS.gene014805:intron | 45.0% | |
| CAAACTGCAGGATATGTGGA+AGG | - | chr3.3:88069933-88069952 | MS.gene014805:CDS | 45.0% | |
| CAGTACGTAGTATGTCACTC+AGG | - | chr3.3:88071290-88071309 | MS.gene014805:CDS | 45.0% | |
| CGGAGGAATTGCAATTCCAA+TGG | - | chr3.3:88069286-88069305 | MS.gene014805:CDS | 45.0% | |
| GACATACTACGTACTGCAGA+TGG | + | chr3.3:88071286-88071305 | None:intergenic | 45.0% | |
| GATGAGATGACAACCAACAG+GGG | - | chr3.3:88071596-88071615 | MS.gene014805:intron | 45.0% | |
| GGATGAGATGACAACCAACA+GGG | - | chr3.3:88071595-88071614 | MS.gene014805:intron | 45.0% | |
| GTACCATTCAAGACCATAGC+TGG | - | chr3.3:88071070-88071089 | MS.gene014805:CDS | 45.0% | |
| GTCCAGTGATAAAGAGATGC+AGG | + | chr3.3:88069663-88069682 | None:intergenic | 45.0% | |
| TAAAGAGATGCAGGTTCCCA+GGG | + | chr3.3:88069654-88069673 | None:intergenic | 45.0% | |
| TATCCCCATAAAACCGAGGT+AGG | + | chr3.3:88070832-88070851 | None:intergenic | 45.0% | |
| TCGGATCAGCTGCAAATCAA+TGG | + | chr3.3:88070397-88070416 | None:intergenic | 45.0% | |
| TCTTCCTGGGAATCAGTTCT+GGG | - | chr3.3:88070876-88070895 | MS.gene014805:CDS | 45.0% | |
| TCTTGAACAAGTCTCGTGTC+TGG | + | chr3.3:88070572-88070591 | None:intergenic | 45.0% | |
| TGATACCAAGGGTTGTGCAA+TGG | - | chr3.3:88070675-88070694 | MS.gene014805:intron | 45.0% | |
| TGGATGAGATGACAACCAAC+AGG | - | chr3.3:88071594-88071613 | MS.gene014805:intron | 45.0% | |
| TGGTACTGTCTCCACAAATG+AGG | + | chr3.3:88071056-88071075 | None:intergenic | 45.0% | |
| TGTGGAAGGACTCCATTTGA+AGG | + | chr3.3:88070247-88070266 | None:intergenic | 45.0% | |
| TGTGTTGCAGGGTTTGTGTT+TGG | - | chr3.3:88068997-88069016 | MS.gene014805:CDS | 45.0% | |
| TGTTCTCCGAAAGCAATGAC+AGG | + | chr3.3:88068673-88068692 | None:intergenic | 45.0% | |
| TTCCAAGTGGTGTTCCTAGA+AGG | - | chr3.3:88069613-88069632 | MS.gene014805:intron | 45.0% | |
| TTCCAATGGCGGTATACCAA+TGG | - | chr3.3:88069300-88069319 | MS.gene014805:CDS | 45.0% | |
| TTGCAGGGTTTGTGTTTGGA+CGG | - | chr3.3:88069001-88069020 | MS.gene014805:CDS | 45.0% | |
| TTTGCAGCTGATCCGAAAGA+GGG | - | chr3.3:88070401-88070420 | MS.gene014805:intron | 45.0% | |
| TTTGTATGCATGGGAGACTG+TGG | + | chr3.3:88070265-88070284 | None:intergenic | 45.0% | |
| ! | AATTACTTGTAACGCCGGCT+TGG | + | chr3.3:88070928-88070947 | None:intergenic | 45.0% |
| ! | CGACGAAGGATTTTCAACCT+TGG | + | chr3.3:88069268-88069287 | None:intergenic | 45.0% |
| ! | CGCTTTTCACAACCCTCTTT+CGG | + | chr3.3:88070416-88070435 | None:intergenic | 45.0% |
| ! | GGATACCTACCTCGGTTTTA+TGG | - | chr3.3:88070824-88070843 | MS.gene014805:CDS | 45.0% |
| ! | TTCCAGTGATGGTAGTGTTG+TGG | - | chr3.3:88069559-88069578 | MS.gene014805:intron | 45.0% |
| ! | TTGGCATCTACTGCCATTTG+TGG | - | chr3.3:88068736-88068755 | MS.gene014805:intron | 45.0% |
| !! | ATTACTTGTAACGCCGGCTT+GGG | + | chr3.3:88070927-88070946 | None:intergenic | 45.0% |
| !! | GTACCAAGCTCTTTCTAGCT+TGG | - | chr3.3:88068872-88068891 | MS.gene014805:CDS | 45.0% |
| AGCCCAAGCTAGAAAGAGCT+TGG | + | chr3.3:88068878-88068897 | None:intergenic | 50.0% | |
| AGGTTCCATTGCACAACCCT+TGG | + | chr3.3:88070683-88070702 | None:intergenic | 50.0% | |
| CAATCAGGAGGGACTGCAAT+AGG | + | chr3.3:88070771-88070790 | None:intergenic | 50.0% | |
| CATTTGAAGGAGGAAGGCCA+AGG | + | chr3.3:88070234-88070253 | None:intergenic | 50.0% | |
| CTATTGCAGTCCCTCCTGAT+TGG | - | chr3.3:88070769-88070788 | MS.gene014805:CDS | 50.0% | |
| GAAAGCAATGACAGGAAGCG+CGG | + | chr3.3:88068665-88068684 | None:intergenic | 50.0% | |
| GCGCTTCCTGTCATTGCTTT+CGG | - | chr3.3:88068664-88068683 | MS.gene014805:intron | 50.0% | |
| GGAAGGACTCCATTTGAAGG+AGG | + | chr3.3:88070244-88070263 | None:intergenic | 50.0% | |
| GGACTCCATTTGAAGGAGGA+AGG | + | chr3.3:88070240-88070259 | None:intergenic | 50.0% | |
| GGTTGAAAATCCTTCGTCGG+AGG | - | chr3.3:88069269-88069288 | MS.gene014805:CDS | 50.0% | |
| GTCACATGGATACCGATAGG+TGG | - | chr3.3:88071136-88071155 | MS.gene014805:CDS | 50.0% | |
| GTCCACAACACTACCATCAC+TGG | + | chr3.3:88069564-88069583 | None:intergenic | 50.0% | |
| GTCTTCCTGGGAATCAGTTC+TGG | - | chr3.3:88070875-88070894 | MS.gene014805:CDS | 50.0% | |
| TATGCATGGGAGACTGTGGA+AGG | + | chr3.3:88070261-88070280 | None:intergenic | 50.0% | |
| TCATAGCGTGGCTTCTCAGA+TGG | - | chr3.3:88070023-88070042 | MS.gene014805:intron | 50.0% | |
| TGTTCTGTTTCGGGGTCACA+TGG | - | chr3.3:88071122-88071141 | MS.gene014805:CDS | 50.0% | |
| TTCAATTCAGGGAGGCTACG+AGG | - | chr3.3:88069516-88069535 | MS.gene014805:CDS | 50.0% | |
| TTTGGCAGTTCTTAGGAGGC+AGG | - | chr3.3:88070288-88070307 | MS.gene014805:intron | 50.0% | |
| ! | AGCCTTCTAGGAACACCACT+TGG | + | chr3.3:88069618-88069637 | None:intergenic | 50.0% |
| ! | CTTGGCCTTCCTCCTTCAAA+TGG | - | chr3.3:88070232-88070251 | MS.gene014805:intron | 50.0% |
| ! | CTTTCCCAGAACTGATTCCC+AGG | + | chr3.3:88070883-88070902 | None:intergenic | 50.0% |
| ! | GGTAGGCAGATGGCTTTTGA+AGG | + | chr3.3:88070068-88070087 | None:intergenic | 50.0% |
| ! | TTTGAACCACAGGGACTGGT+AGG | - | chr3.3:88069228-88069247 | MS.gene014805:intron | 50.0% |
| !! | AAGCTCTTTCTAGCTTGGGC+TGG | - | chr3.3:88068877-88068896 | MS.gene014805:CDS | 50.0% |
| !! | CTGGGAATCAGTTCTGGGAA+AGG | - | chr3.3:88070881-88070900 | MS.gene014805:CDS | 50.0% |
| !! | GAAAAGCGCCAAGGAATGCA+TGG | - | chr3.3:88070428-88070447 | MS.gene014805:intron | 50.0% |
| !! | GCTGTTTTGTCCACTTCCCT+GGG | - | chr3.3:88069635-88069654 | MS.gene014805:intron | 50.0% |
| !! | TCTTTCTAGCTTGGGCTGGT+TGG | - | chr3.3:88068881-88068900 | MS.gene014805:CDS | 50.0% |
| !! | TTACTTGTAACGCCGGCTTG+GGG | + | chr3.3:88070926-88070945 | None:intergenic | 50.0% |
| ACACCACTTGGAACGTCGTC+AGG | + | chr3.3:88069606-88069625 | None:intergenic | 55.0% | |
| ATGCCTGACGACGTTCCAAG+TGG | - | chr3.3:88069600-88069619 | MS.gene014805:intron | 55.0% | |
| CAGGAGGGACTGCAATAGGT+TGG | + | chr3.3:88070767-88070786 | None:intergenic | 55.0% | |
| GGGGTCACATGGATACCGAT+AGG | - | chr3.3:88071133-88071152 | MS.gene014805:CDS | 55.0% | |
| TGGGTCTGCGCAATCTGTTC+CGG | - | chr3.3:88068519-88068538 | MS.gene014805:CDS | 55.0% | |
| !! | GAGGGTTGTGAAAAGCGCCA+AGG | - | chr3.3:88070419-88070438 | MS.gene014805:intron | 55.0% |
| !! | GGCTGTTTTGTCCACTTCCC+TGG | - | chr3.3:88069634-88069653 | MS.gene014805:intron | 55.0% |
| AACTCGCCTACCAGTCCCTG+TGG | + | chr3.3:88069237-88069256 | None:intergenic | 60.0% | |
| AGGCGAGTTCAGCACTCCCA+AGG | - | chr3.3:88069248-88069267 | MS.gene014805:CDS | 60.0% | |
| GATGCAGGTTCCCAGGGAAG+TGG | + | chr3.3:88069648-88069667 | None:intergenic | 60.0% | |
| GCGCAATCTGTTCCGGCGTT+AGG | - | chr3.3:88068526-88068545 | MS.gene014805:CDS | 60.0% | |
| TCCTCTTCGTCACCCCAAGC+CGG | - | chr3.3:88070911-88070930 | MS.gene014805:CDS | 60.0% | |
| !! | GCCGGCTTGGGGTGACGAAG+AGG | + | chr3.3:88070915-88070934 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88068453 | 88071721 | 88068453 | ID=MS.gene014805 |
| chr3.3 | mRNA | 88068453 | 88071721 | 88068453 | ID=MS.gene014805.t1;Parent=MS.gene014805 |
| chr3.3 | exon | 88071627 | 88071721 | 88071627 | ID=MS.gene014805.t1.exon1;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88071627 | 88071721 | 88071627 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88071272 | 88071547 | 88071272 | ID=MS.gene014805.t1.exon2;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88071272 | 88071547 | 88071272 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88071029 | 88071167 | 88071029 | ID=MS.gene014805.t1.exon3;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88071029 | 88071167 | 88071029 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88070769 | 88070934 | 88070769 | ID=MS.gene014805.t1.exon4;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88070769 | 88070934 | 88070769 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88070482 | 88070648 | 88070482 | ID=MS.gene014805.t1.exon5;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88070482 | 88070648 | 88070482 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88070058 | 88070231 | 88070058 | ID=MS.gene014805.t1.exon6;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88070058 | 88070231 | 88070058 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88069865 | 88069960 | 88069865 | ID=MS.gene014805.t1.exon7;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88069865 | 88069960 | 88069865 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88069650 | 88069766 | 88069650 | ID=MS.gene014805.t1.exon8;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88069650 | 88069766 | 88069650 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88069233 | 88069540 | 88069233 | ID=MS.gene014805.t1.exon9;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88069233 | 88069540 | 88069233 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88068862 | 88069141 | 88068862 | ID=MS.gene014805.t1.exon10;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88068862 | 88069141 | 88068862 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| chr3.3 | exon | 88068453 | 88068644 | 88068453 | ID=MS.gene014805.t1.exon11;Parent=MS.gene014805.t1 |
| chr3.3 | CDS | 88068453 | 88068644 | 88068453 | ID=cds.MS.gene014805.t1;Parent=MS.gene014805.t1 |
| Gene Sequence |
| Protein sequence |
