Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034033.t1 | PNY17407.1 | 88 | 642 | 46 | 4 | 11 | 650 | 3 | 615 | 0.00E+00 | 1113.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034033.t1 | Q9XI23 | 71.2 | 659 | 180 | 4 | 5 | 654 | 10 | 667 | 4.4e-275 | 948.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034033.t1 | A0A2K3PQ58 | 88.0 | 642 | 46 | 4 | 11 | 650 | 3 | 615 | 0.0e+00 | 1113.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81615 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene39051 | PPI |
| MS.gene51559 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene070503 | PPI |
| MS.gene034033 | MS.gene057884 | PPI |
| MS.gene034033 | MS.gene057883 | PPI |
| MS.gene016742 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene42533 | PPI |
| MS.gene034033 | MS.gene016758 | PPI |
| MS.gene034033 | MS.gene61680 | PPI |
| MS.gene070510 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene070492 | PPI |
| MS.gene81622 | MS.gene034033 | PPI |
| MS.gene016743 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene070511 | PPI |
| MS.gene014805 | MS.gene034033 | PPI |
| MS.gene37911 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene67840 | PPI |
| MS.gene81620 | MS.gene034033 | PPI |
| MS.gene070505 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene017877 | PPI |
| MS.gene057886 | MS.gene034033 | PPI |
| MS.gene070509 | MS.gene034033 | PPI |
| MS.gene32602 | MS.gene034033 | PPI |
| MS.gene015968 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene60262 | PPI |
| MS.gene072928 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene014107 | PPI |
| MS.gene070507 | MS.gene034033 | PPI |
| MS.gene034033 | MS.gene81617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034033.t1 | MTR_0459s0020 | 78.086 | 648 | 135 | 4 | 1 | 641 | 9 | 656 | 0.0 | 1029 |
| MS.gene034033.t1 | MTR_3g107730 | 66.865 | 673 | 211 | 5 | 4 | 668 | 1 | 669 | 0.0 | 915 |
| MS.gene034033.t1 | MTR_0366s0020 | 69.922 | 645 | 109 | 3 | 1 | 641 | 9 | 572 | 0.0 | 887 |
| MS.gene034033.t1 | MTR_1g011840 | 65.997 | 647 | 211 | 3 | 7 | 647 | 3 | 646 | 0.0 | 883 |
| MS.gene034033.t1 | MTR_3g107730 | 70.349 | 516 | 150 | 1 | 4 | 519 | 1 | 513 | 0.0 | 773 |
| MS.gene034033.t1 | MTR_7g110000 | 58.269 | 647 | 258 | 4 | 7 | 642 | 7 | 652 | 0.0 | 753 |
| MS.gene034033.t1 | MTR_3g077670 | 58.476 | 643 | 254 | 7 | 7 | 637 | 7 | 648 | 0.0 | 727 |
| MS.gene034033.t1 | MTR_2g032690 | 54.493 | 690 | 280 | 7 | 7 | 664 | 7 | 694 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034033.t1 | AT1G15460 | 71.061 | 660 | 181 | 4 | 5 | 655 | 10 | 668 | 0.0 | 981 |
| MS.gene034033.t1 | AT1G15460 | 71.061 | 660 | 181 | 4 | 5 | 655 | 10 | 668 | 0.0 | 981 |
| MS.gene034033.t1 | AT1G74810 | 68.333 | 660 | 199 | 5 | 5 | 655 | 10 | 668 | 0.0 | 942 |
| MS.gene034033.t1 | AT1G74810 | 68.333 | 660 | 199 | 5 | 5 | 655 | 10 | 668 | 0.0 | 942 |
| MS.gene034033.t1 | AT1G74810 | 68.333 | 660 | 199 | 5 | 5 | 655 | 10 | 668 | 0.0 | 942 |
| MS.gene034033.t1 | AT1G15460 | 72.330 | 618 | 162 | 3 | 5 | 613 | 10 | 627 | 0.0 | 936 |
| MS.gene034033.t1 | AT1G74810 | 68.680 | 629 | 187 | 5 | 36 | 655 | 9 | 636 | 0.0 | 898 |
| MS.gene034033.t1 | AT1G74810 | 68.680 | 629 | 187 | 5 | 36 | 655 | 9 | 636 | 0.0 | 898 |
| MS.gene034033.t1 | AT4G32510 | 64.978 | 671 | 218 | 6 | 1 | 655 | 1 | 670 | 0.0 | 892 |
| MS.gene034033.t1 | AT4G32510 | 65.309 | 663 | 214 | 5 | 1 | 647 | 1 | 663 | 0.0 | 890 |
| MS.gene034033.t1 | AT5G25430 | 64.448 | 661 | 220 | 3 | 7 | 658 | 9 | 663 | 0.0 | 886 |
| MS.gene034033.t1 | AT1G15460 | 69.982 | 563 | 159 | 4 | 102 | 655 | 1 | 562 | 0.0 | 819 |
| MS.gene034033.t1 | AT1G74810 | 67.318 | 563 | 174 | 5 | 102 | 655 | 1 | 562 | 0.0 | 786 |
| MS.gene034033.t1 | AT3G62270 | 59.624 | 639 | 249 | 4 | 7 | 637 | 7 | 644 | 0.0 | 770 |
| MS.gene034033.t1 | AT2G47160 | 59.531 | 640 | 247 | 4 | 7 | 637 | 7 | 643 | 0.0 | 767 |
| MS.gene034033.t1 | AT2G47160 | 57.293 | 665 | 247 | 5 | 7 | 637 | 7 | 668 | 0.0 | 755 |
| MS.gene034033.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene034033.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene034033.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene034033.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene034033.t1 | AT1G74810 | 67.300 | 526 | 162 | 5 | 139 | 655 | 1 | 525 | 0.0 | 730 |
Find 129 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTGCATCTAGTTCTTTA+AGG | 0.119813 | 4.3:-85561531 | None:intergenic |
| GGAATCATACATTCAATTAT+TGG | 0.192328 | 4.3:+85557683 | MS.gene034033:CDS |
| TCTCCAAGTTCTTAGCTATT+TGG | 0.206601 | 4.3:-85562281 | None:intergenic |
| GTCTTCCTGGTAATCAATTC+TGG | 0.223462 | 4.3:+85561055 | MS.gene034033:CDS |
| TTTGATCATAGTGTTGCTTC+TGG | 0.240147 | 4.3:+85559319 | MS.gene034033:CDS |
| TTTCCAATGTGTCTATTTCT+TGG | 0.240352 | 4.3:+85561396 | MS.gene034033:CDS |
| GTCTATTTCTTGGTTTGTTT+TGG | 0.242089 | 4.3:+85561406 | MS.gene034033:CDS |
| GTTCATTCAAGAGGCTATTA+AGG | 0.247348 | 4.3:+85558331 | MS.gene034033:CDS |
| CTTTGCTCATTTACTCTAAC+AGG | 0.255775 | 4.3:-85560916 | None:intergenic |
| TGTGCTTTCCGTTCTGGTAT+TGG | 0.264166 | 4.3:+85556529 | MS.gene034033:CDS |
| TGGACTTGTGCTTTCCGTTC+TGG | 0.268770 | 4.3:+85556523 | MS.gene034033:CDS |
| CTTTGTTAATGATAGGATAT+TGG | 0.271262 | 4.3:+85556654 | MS.gene034033:intron |
| AGAGCAAGATCTTGGTTATA+TGG | 0.279601 | 4.3:+85558593 | MS.gene034033:CDS |
| CATGTTATTTCATTAGGATT+AGG | 0.286490 | 4.3:-85562245 | None:intergenic |
| TCACTGATAATTCCCTTAAA+TGG | 0.290715 | 4.3:-85556466 | None:intergenic |
| TTAAAAGAGGTAATCTTAAA+AGG | 0.294451 | 4.3:+85560832 | MS.gene034033:CDS |
| TCACATAAAGCCAGTGAAAT+TGG | 0.305810 | 4.3:-85558511 | None:intergenic |
| GTGCTTTCCGTTCTGGTATT+GGG | 0.307157 | 4.3:+85556530 | MS.gene034033:CDS |
| CATTATGACATATTCTTACT+AGG | 0.307870 | 4.3:+85559388 | MS.gene034033:CDS |
| GTGGTTAAAATCACCATTTA+AGG | 0.325877 | 4.3:+85556453 | MS.gene034033:CDS |
| CTTTATGTGAATGGTTTACT+AGG | 0.330252 | 4.3:+85558524 | MS.gene034033:CDS |
| GCTTTGCCTGTTATTGCCTT+TGG | 0.333578 | 4.3:+85556706 | MS.gene034033:CDS |
| AAGAAGACTATGTATCTAAT+TGG | 0.335535 | 4.3:-85561367 | None:intergenic |
| TTCACCTAGCTTTGGATCAA+TGG | 0.338378 | 4.3:+85561763 | MS.gene034033:CDS |
| GCTAGCAACTCTGAAATCTA+TGG | 0.346046 | 4.3:+85560307 | MS.gene034033:CDS |
| GGAAACAAGATTCCAGCTAT+TGG | 0.355801 | 4.3:-85561442 | None:intergenic |
| ATGGCCATTGATAGTCTTCC+TGG | 0.358761 | 4.3:+85561042 | MS.gene034033:CDS |
| CTAGGTATTATATTCACATT+TGG | 0.359706 | 4.3:+85558542 | MS.gene034033:CDS |
| GCAAGCAGTGTTTGTGGAAA+TGG | 0.365305 | 4.3:+85560336 | MS.gene034033:CDS |
| ATTCCTGCCTTGATGGTAGC+AGG | 0.375523 | 4.3:+85559286 | MS.gene034033:CDS |
| TGCTCACCAAAGGCAATAAC+AGG | 0.379306 | 4.3:-85556712 | None:intergenic |
| AGAAGCTTTATTGCAGACTA+TGG | 0.379594 | 4.3:+85558894 | MS.gene034033:CDS |
| TTTCACTGGCTTTATGTGAA+TGG | 0.387832 | 4.3:+85558515 | MS.gene034033:CDS |
| TTGATCATAGTGTTGCTTCT+GGG | 0.397693 | 4.3:+85559320 | MS.gene034033:CDS |
| AGAGGAGCAACTAGTCTTCT+TGG | 0.398425 | 4.3:-85558987 | None:intergenic |
| GTGGGGATACTTTGCATACA+TGG | 0.407230 | 4.3:+85561023 | MS.gene034033:CDS |
| CACAATGTTATAAAGATGAT+TGG | 0.423839 | 4.3:+85556503 | MS.gene034033:CDS |
| ACTTTGATTTGTGGACTACT+TGG | 0.426646 | 4.3:+85559538 | MS.gene034033:CDS |
| AATCTCCATCTTTGCACCAT+TGG | 0.428946 | 4.3:+85559018 | MS.gene034033:CDS |
| GGGTCATCATGCTTCCTTTG+TGG | 0.430230 | 4.3:+85561336 | MS.gene034033:CDS |
| CAAATGGATTCACCTAGCTT+TGG | 0.430914 | 4.3:+85561755 | MS.gene034033:CDS |
| CTGGCTTCTACAGCCATTTG+TGG | 0.431750 | 4.3:+85557662 | MS.gene034033:CDS |
| ATTTCAGACTTCTGTGGAAA+GGG | 0.431944 | 4.3:+85560798 | MS.gene034033:intron |
| ATATCGTCAACAGATTTACT+AGG | 0.432276 | 4.3:+85558270 | MS.gene034033:CDS |
| CATGCATCAATATGCTTCTC+AGG | 0.433291 | 4.3:-85560889 | None:intergenic |
| GACTAGTTGCTCCTCTAGCT+TGG | 0.433751 | 4.3:+85558994 | MS.gene034033:CDS |
| AGAGCAGAAGAGCAAGATCT+TGG | 0.434649 | 4.3:+85558585 | MS.gene034033:CDS |
| ACTTACTTGAACCACCTACT+AGG | 0.441604 | 4.3:-85561105 | None:intergenic |
| GAGCAAGATCTTGGTTATAT+GGG | 0.443047 | 4.3:+85558594 | MS.gene034033:CDS |
| ATCTTAAAAGGTGAAGATAA+AGG | 0.446293 | 4.3:+85560844 | MS.gene034033:CDS |
| TTCTCTTTGTGTCACCTAGT+AGG | 0.452706 | 4.3:+85561091 | MS.gene034033:CDS |
| GCAAAGAAAATATAGGTAGT+TGG | 0.454754 | 4.3:-85556679 | None:intergenic |
| CTCCTAGCAATATTTAATGT+TGG | 0.457606 | 4.3:+85558245 | MS.gene034033:CDS |
| ACATTTCAGACTTTGATTTG+TGG | 0.458488 | 4.3:+85559529 | MS.gene034033:intron |
| AGATCTTGGTTATATGGGAC+AGG | 0.463073 | 4.3:+85558599 | MS.gene034033:CDS |
| TCTTCCTGGTAATCAATTCT+GGG | 0.464011 | 4.3:+85561056 | MS.gene034033:CDS |
| TAGAGAGGAAAGACATGGTC+AGG | 0.466319 | 4.3:+85561859 | MS.gene034033:CDS |
| CTCCTACAATGAGGAGTGGT+TGG | 0.469360 | 4.3:-85557709 | None:intergenic |
| TATCCCCACAAAACAGAAGT+TGG | 0.470017 | 4.3:-85561009 | None:intergenic |
| TTTAGCAAAGTTGTACAAGT+AGG | 0.472082 | 4.3:-85557759 | None:intergenic |
| TGAATGTATGATTCCACAAA+TGG | 0.480302 | 4.3:-85557675 | None:intergenic |
| AGCAGAAGCAAAGAAAATAT+AGG | 0.482036 | 4.3:-85556686 | None:intergenic |
| TTCAGTCTTGTTCATTCAAG+AGG | 0.482368 | 4.3:+85558322 | MS.gene034033:CDS |
| ACTGTCCAATGGTGCAAAGA+TGG | 0.487827 | 4.3:-85559023 | None:intergenic |
| CTTTCCCAGAATTGATTACC+AGG | 0.490212 | 4.3:-85561060 | None:intergenic |
| CCTCTCAGTTCTCAAGGGTC+TGG | 0.490548 | 4.3:+85559612 | MS.gene034033:CDS |
| GGAATTATCAGTGATATAAG+AGG | 0.491020 | 4.3:+85556475 | MS.gene034033:CDS |
| CTTGGCTTACCTCCTTCAAA+TGG | 0.497540 | 4.3:+85559556 | MS.gene034033:CDS |
| TGGTTAAAATCACCATTTAA+GGG | 0.497603 | 4.3:+85556454 | MS.gene034033:CDS |
| TTCCTGCCTTGATGGTAGCA+GGG | 0.499828 | 4.3:+85559287 | MS.gene034033:CDS |
| GTGGTGAGGACTAAAGAACT+TGG | 0.503779 | 4.3:-85561509 | None:intergenic |
| ACTAGTTGCTCCTCTAGCTT+GGG | 0.506471 | 4.3:+85558995 | MS.gene034033:CDS |
| GCTGAATATGAAGAAATTGC+TGG | 0.508359 | 4.3:+85561550 | MS.gene034033:CDS |
| TAAGAGCCTCTCAGTTCTCA+AGG | 0.513791 | 4.3:+85559606 | MS.gene034033:CDS |
| TGAGGAAGAACACCATTTGA+AGG | 0.516885 | 4.3:-85559568 | None:intergenic |
| AAAGATGCAAGCAGTGTTTG+TGG | 0.516975 | 4.3:+85560330 | MS.gene034033:CDS |
| GGCCAACCACTCCTCATTGT+AGG | 0.517222 | 4.3:+85557707 | MS.gene034033:CDS |
| GTGACATGGATTCCAATAGC+TGG | 0.521942 | 4.3:+85561430 | MS.gene034033:CDS |
| GATTAAATTTCAGACTTCTG+TGG | 0.522445 | 4.3:+85560792 | MS.gene034033:intron |
| CAGAACAGTACCAATTTCAC+TGG | 0.525064 | 4.3:+85558501 | MS.gene034033:CDS |
| AATTTCAGACTTCTGTGGAA+AGG | 0.526786 | 4.3:+85560797 | MS.gene034033:intron |
| ATTTCCATTGATCCAAAGCT+AGG | 0.528239 | 4.3:-85561767 | None:intergenic |
| CTGGTAATCAATTCTGGGAA+AGG | 0.528888 | 4.3:+85561061 | MS.gene034033:CDS |
| AGTCTTCTTGGAATTTCAGA+AGG | 0.536248 | 4.3:-85558975 | None:intergenic |
| GTAGATGATCAGAAGAAAGA+TGG | 0.537686 | 4.3:+85560252 | MS.gene034033:intron |
| TTCTGGGATGGCACAACAGA+AGG | 0.538374 | 4.3:+85559336 | MS.gene034033:CDS |
| ATTACCAGGAAGACTATCAA+TGG | 0.540612 | 4.3:-85561046 | None:intergenic |
| TTATGCTGCAGGACATGGGA+AGG | 0.542317 | 4.3:+85559233 | MS.gene034033:intron |
| TATTTATGCTTGAAATGAGG+TGG | 0.551216 | 4.3:+85556434 | None:intergenic |
| TCTTTGTGTCACCTAGTAGG+TGG | 0.553721 | 4.3:+85561094 | MS.gene034033:CDS |
| TGGTGAGGACTAAAGAACTT+GGG | 0.554627 | 4.3:-85561508 | None:intergenic |
| TGCCAACATTAAATATTGCT+AGG | 0.555211 | 4.3:-85558247 | None:intergenic |
| CATACACTCAAAGAGAGTCT+TGG | 0.555643 | 4.3:-85561577 | None:intergenic |
| AGCCCTGCTACCATCAAGGC+AGG | 0.556589 | 4.3:-85559289 | None:intergenic |
| AAACCAAGAAATAGACACAT+TGG | 0.559958 | 4.3:-85561399 | None:intergenic |
| CAGAACTTTAAGCTTTAGAG+AGG | 0.561772 | 4.3:+85561844 | MS.gene034033:CDS |
| TAGGTATACATGATGATGGT+GGG | 0.568391 | 4.3:-85557740 | None:intergenic |
| TCGATTCAGCTGCTCACCAA+AGG | 0.568516 | 4.3:-85556722 | None:intergenic |
| CAATTTATGCTGCAGGACAT+GGG | 0.573504 | 4.3:+85559229 | MS.gene034033:intron |
| GTAAAGCCCTGCTACCATCA+AGG | 0.579565 | 4.3:-85559293 | None:intergenic |
| ATCATACATTCAATTATTGG+AGG | 0.587308 | 4.3:+85557686 | MS.gene034033:CDS |
| GGAACTAGAGAACTTAAAAG+AGG | 0.588872 | 4.3:+85560819 | MS.gene034033:CDS |
| TCTAGTTCTTTAAGGTGGTG+AGG | 0.589908 | 4.3:-85561523 | None:intergenic |
| TATCGTCAACAGATTTACTA+GGG | 0.593342 | 4.3:+85558271 | MS.gene034033:CDS |
| TATGCTGCAGGACATGGGAA+GGG | 0.598343 | 4.3:+85559234 | MS.gene034033:intron |
| TCATAGTGTTGCTTCTGGGA+TGG | 0.600477 | 4.3:+85559324 | MS.gene034033:CDS |
| AAAGATGGTTGAAACTGCCA+AGG | 0.602722 | 4.3:+85560267 | MS.gene034033:CDS |
| TCTTCAATGTTGTATAGAGA+AGG | 0.603043 | 4.3:-85558565 | None:intergenic |
| CTGCATCTAGTTCTTTAAGG+TGG | 0.609386 | 4.3:-85561528 | None:intergenic |
| TTAGTATGCATAGGAGATTG+AGG | 0.610628 | 4.3:-85559586 | None:intergenic |
| GAGAGGCTCTTAGTATGCAT+AGG | 0.616506 | 4.3:-85559595 | None:intergenic |
| AAGAGCCTCTCAGTTCTCAA+GGG | 0.616777 | 4.3:+85559607 | MS.gene034033:CDS |
| CAAGTAGGTATACATGATGA+TGG | 0.617804 | 4.3:-85557744 | None:intergenic |
| AATTGGTACTGTTTCCACAA+AGG | 0.619899 | 4.3:-85561350 | None:intergenic |
| GATGAATTAACTACAAGCAG+AGG | 0.625445 | 4.3:+85561809 | MS.gene034033:CDS |
| GTAGGTATACATGATGATGG+TGG | 0.632071 | 4.3:-85557741 | None:intergenic |
| TTACTTTGATAACTGTCCAA+TGG | 0.633020 | 4.3:-85559034 | None:intergenic |
| ATGTCATAATGATATGCAGA+AGG | 0.635380 | 4.3:-85559376 | None:intergenic |
| AGCTTTAGAGAGGAAAGACA+TGG | 0.645374 | 4.3:+85561854 | MS.gene034033:CDS |
| GATGGAGATTCCCAAGCTAG+AGG | 0.645592 | 4.3:-85559005 | None:intergenic |
| ATTGAGCACAGTAGAAACAC+TGG | 0.647913 | 4.3:+85557643 | MS.gene034033:CDS |
| GGAAGAACACCATTTGAAGG+AGG | 0.648209 | 4.3:-85559565 | None:intergenic |
| GGTGAGGACTAAAGAACTTG+GGG | 0.660807 | 4.3:-85561507 | None:intergenic |
| AAACTTACCCAATACCAGAA+CGG | 0.665316 | 4.3:-85556537 | None:intergenic |
| GAGGACTAAAGAACTTGGGG+AGG | 0.669482 | 4.3:-85561504 | None:intergenic |
| GAGCAGCTGAATCGAGACAC+AGG | 0.681742 | 4.3:+85556730 | MS.gene034033:CDS |
| GCAACTCCTACAATGAGGAG+TGG | 0.695067 | 4.3:-85557713 | None:intergenic |
| GTTCTGCAACTCCTACAATG+AGG | 0.722737 | 4.3:-85557718 | None:intergenic |
| CCAGACCCTTGAGAACTGAG+AGG | 0.733266 | 4.3:-85559612 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTCTTTATTATTATAA+TGG | + | chr4.3:85557844-85557863 | MS.gene034033:intron | 10.0% |
| !! | GTATTAATGATTAAATTAAA+TGG | + | chr4.3:85560199-85560218 | MS.gene034033:intron | 10.0% |
| !! | TAATAATTAGAGAAAAAAAA+TGG | + | chr4.3:85560669-85560688 | MS.gene034033:intron | 10.0% |
| !! | TAGATGTATAATTATAATTA+AGG | + | chr4.3:85557082-85557101 | MS.gene034033:intron | 10.0% |
| !! | TATTTGAAAAAAAAAAAAAC+TGG | + | chr4.3:85562173-85562192 | MS.gene034033:intron | 10.0% |
| !!! | AAAACTTTGTTTAAATATTA+CGG | - | chr4.3:85559804-85559823 | None:intergenic | 10.0% |
| !!! | TTTTCAAATAAAAAAAACAT+TGG | - | chr4.3:85562163-85562182 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTCTAATTATTAT+AGG | - | chr4.3:85560668-85560687 | None:intergenic | 10.0% |
| !! | AATTATAATTATACATCTAG+AGG | - | chr4.3:85557081-85557100 | None:intergenic | 15.0% |
| !! | TATAATTATAATTAAGGATG+AGG | + | chr4.3:85557088-85557107 | MS.gene034033:intron | 15.0% |
| !! | TTAAGCTTATAAAATAACTT+TGG | - | chr4.3:85557187-85557206 | None:intergenic | 15.0% |
| !! | TTTCTAATAGTATTTACAAA+GGG | - | chr4.3:85559444-85559463 | None:intergenic | 15.0% |
| !!! | AAATATAATTTTGCTTGAAA+AGG | + | chr4.3:85558401-85558420 | MS.gene034033:intron | 15.0% |
| !!! | ACAAAATTTTGTTTAAATAC+CGG | - | chr4.3:85560047-85560066 | None:intergenic | 15.0% |
| !!! | TAGGTTTTAAAGATAATTTA+TGG | + | chr4.3:85562077-85562096 | MS.gene034033:intron | 15.0% |
| !!! | TTATAGTTTTTATAAAGCAT+AGG | + | chr4.3:85559649-85559668 | MS.gene034033:intron | 15.0% |
| !! | AAAAAAAACATTGGTCATTA+AGG | - | chr4.3:85562154-85562173 | None:intergenic | 20.0% |
| !! | AAAGTTTACTAAAATTATGC+AGG | + | chr4.3:85558433-85558452 | MS.gene034033:intron | 20.0% |
| !! | AAGTTTACTAAAATTATGCA+GGG | + | chr4.3:85558434-85558453 | MS.gene034033:intron | 20.0% |
| !! | AATATGACAAAGACTAAATT+TGG | + | chr4.3:85556975-85556994 | MS.gene034033:intron | 20.0% |
| !! | CAAATAGTAAAGTTATGTAT+CGG | + | chr4.3:85560436-85560455 | MS.gene034033:intron | 20.0% |
| !! | CTTTCTAATAGTATTTACAA+AGG | - | chr4.3:85559445-85559464 | None:intergenic | 20.0% |
| !! | TGAATCTCATTATTAATTAG+TGG | + | chr4.3:85559476-85559495 | MS.gene034033:intron | 20.0% |
| !! | TTAAAAGAGGTAATCTTAAA+AGG | + | chr4.3:85560832-85560851 | MS.gene034033:CDS | 20.0% |
| !! | TTATAGAAACAATTTATGAC+AGG | + | chr4.3:85562012-85562031 | MS.gene034033:intron | 20.0% |
| !! | TTTGAAAAAAGATCTTAGTT+TGG | + | chr4.3:85559682-85559701 | MS.gene034033:intron | 20.0% |
| !!! | ACTTATCTATATATTTTCTC+AGG | + | chr4.3:85558192-85558211 | MS.gene034033:intron | 20.0% |
| !!! | ACTTGCACTTTTTTTTTTTT+TGG | + | chr4.3:85556615-85556634 | MS.gene034033:intron | 20.0% |
| !!! | ATTATCTTTAAAACCTATTC+CGG | - | chr4.3:85562074-85562093 | None:intergenic | 20.0% |
| !!! | ATTTGCTGAAAAAAAAGTAA+AGG | - | chr4.3:85561740-85561759 | None:intergenic | 20.0% |
| !!! | CTTATCTATATATTTTCTCA+GGG | + | chr4.3:85558193-85558212 | MS.gene034033:intron | 20.0% |
| !!! | TATGTGATAAGTGTTTTATT+AGG | + | chr4.3:85562108-85562127 | MS.gene034033:intron | 20.0% |
| !!! | TCTGAAATTTAATCATGTTT+GGG | - | chr4.3:85560786-85560805 | None:intergenic | 20.0% |
| !!! | TTCAATCTAAAGTTACTTAT+TGG | + | chr4.3:85560583-85560602 | MS.gene034033:intron | 20.0% |
| !!! | TTGTTTATTTTGTTCATAGA+TGG | + | chr4.3:85557617-85557636 | MS.gene034033:intron | 20.0% |
| !!! | TTTACTTTTTTTTCAGCAAA+TGG | + | chr4.3:85561739-85561758 | MS.gene034033:intron | 20.0% |
| !!! | TTTAGTCTTTGTCATATTAT+TGG | - | chr4.3:85556973-85556992 | None:intergenic | 20.0% |
| !!! | TTTTCACATGTTATTTCATT+AGG | - | chr4.3:85562254-85562273 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGCGTAAACT+AGG | + | chr4.3:85556784-85556803 | MS.gene034033:intron | 20.0% |
| ! | AAAGCAGCAAAAATATATGT+TGG | - | chr4.3:85559265-85559284 | None:intergenic | 25.0% |
| ! | AAATAAAACGGTCTACATAT+AGG | - | chr4.3:85558103-85558122 | None:intergenic | 25.0% |
| ! | AACTTTGCTAAAAATAAGGA+TGG | + | chr4.3:85557770-85557789 | MS.gene034033:CDS | 25.0% |
| ! | AAGAAGACTATGTATCTAAT+TGG | - | chr4.3:85561370-85561389 | None:intergenic | 25.0% |
| ! | AATTATAATTAAGGATGAGG+TGG | + | chr4.3:85557091-85557110 | MS.gene034033:intron | 25.0% |
| ! | ACTAAACCATTATAACAGTT+CGG | - | chr4.3:85561201-85561220 | None:intergenic | 25.0% |
| ! | ACTATTATAAGACTTACAAC+TGG | - | chr4.3:85560370-85560389 | None:intergenic | 25.0% |
| ! | AGCAATTCAATTGTAATCTT+TGG | - | chr4.3:85561895-85561914 | None:intergenic | 25.0% |
| ! | ATCATACATTCAATTATTGG+AGG | + | chr4.3:85557686-85557705 | MS.gene034033:CDS | 25.0% |
| ! | ATCTTAAAAGGTGAAGATAA+AGG | + | chr4.3:85560844-85560863 | MS.gene034033:CDS | 25.0% |
| ! | ATGGTGAAATTAGATAAAAG+AGG | + | chr4.3:85559096-85559115 | MS.gene034033:intron | 25.0% |
| ! | CACAATGTTATAAAGATGAT+TGG | + | chr4.3:85556503-85556522 | MS.gene034033:CDS | 25.0% |
| ! | CATTATGACATATTCTTACT+AGG | + | chr4.3:85559388-85559407 | MS.gene034033:CDS | 25.0% |
| ! | CTAGGTATTATATTCACATT+TGG | + | chr4.3:85558542-85558561 | MS.gene034033:CDS | 25.0% |
| ! | CTATTATAAGACTTACAACT+GGG | - | chr4.3:85560369-85560388 | None:intergenic | 25.0% |
| ! | CTCCTTCCTTAAAAAAAAAA+TGG | - | chr4.3:85558047-85558066 | None:intergenic | 25.0% |
| ! | CTTTGTTAATGATAGGATAT+TGG | + | chr4.3:85556654-85556673 | MS.gene034033:intron | 25.0% |
| ! | GGAATCATACATTCAATTAT+TGG | + | chr4.3:85557683-85557702 | MS.gene034033:CDS | 25.0% |
| ! | GTACAACTTTGCTAAAAATA+AGG | + | chr4.3:85557766-85557785 | MS.gene034033:CDS | 25.0% |
| ! | TAAGTTAGATAATCCAAACA+AGG | - | chr4.3:85559077-85559096 | None:intergenic | 25.0% |
| ! | TACGTAATACGATATTATAG+TGG | + | chr4.3:85559724-85559743 | MS.gene034033:intron | 25.0% |
| ! | TGGTTAAAATCACCATTTAA+GGG | + | chr4.3:85556454-85556473 | MS.gene034033:CDS | 25.0% |
| ! | TGTAGATATCGGTAATAATA+TGG | + | chr4.3:85561700-85561719 | MS.gene034033:intron | 25.0% |
| ! | TGTTTGGATTATCTAACTTA+TGG | + | chr4.3:85559077-85559096 | MS.gene034033:intron | 25.0% |
| ! | TTAAGTGCTTATAACATAAG+AGG | + | chr4.3:85558156-85558175 | MS.gene034033:intron | 25.0% |
| ! | TTAGAATTGAGATCAAATAG+TGG | - | chr4.3:85561622-85561641 | None:intergenic | 25.0% |
| ! | TTATAGAAAAGATGCAAGTT+TGG | + | chr4.3:85559912-85559931 | MS.gene034033:intron | 25.0% |
| ! | TTCTTGAATCTTGAATTCAT+AGG | + | chr4.3:85558663-85558682 | MS.gene034033:intron | 25.0% |
| !! | AACTGCAAAAAGTATAACTT+AGG | - | chr4.3:85559192-85559211 | None:intergenic | 25.0% |
| !! | ACTGCAAAAAGTATAACTTA+GGG | - | chr4.3:85559191-85559210 | None:intergenic | 25.0% |
| !! | AGTTGTTAAAGGTATATTTG+AGG | + | chr4.3:85558828-85558847 | MS.gene034033:intron | 25.0% |
| !! | GTCTGAAATTTAATCATGTT+TGG | - | chr4.3:85560787-85560806 | None:intergenic | 25.0% |
| !! | GTTAACATGATTTTAAATCG+CGG | - | chr4.3:85561282-85561301 | None:intergenic | 25.0% |
| !! | TAAATGGGATACTTTTGATA+AGG | + | chr4.3:85560215-85560234 | MS.gene034033:intron | 25.0% |
| !! | TTAGGTTGTTTATCCAAATA+TGG | + | chr4.3:85562126-85562145 | MS.gene034033:intron | 25.0% |
| !!! | AAAAACCTAATGCTTTGTTT+TGG | + | chr4.3:85559501-85559520 | MS.gene034033:intron | 25.0% |
| !!! | ATTTCAGAAGGTATTTTTCT+TGG | - | chr4.3:85558966-85558985 | None:intergenic | 25.0% |
| !!! | CATGTTATTTCATTAGGATT+AGG | - | chr4.3:85562248-85562267 | None:intergenic | 25.0% |
| !!! | GAAGTTGAGTTTTCATTTTT+AGG | - | chr4.3:85558482-85558501 | None:intergenic | 25.0% |
| !!! | GACCATTTTTTTTTTAAGGA+AGG | + | chr4.3:85558042-85558061 | MS.gene034033:intron | 25.0% |
| !!! | GCAAGACCATTTTTTTTTTA+AGG | + | chr4.3:85558038-85558057 | MS.gene034033:intron | 25.0% |
| !!! | TATGACATGGTCTTATTTAT+TGG | + | chr4.3:85558859-85558878 | MS.gene034033:intron | 25.0% |
| !!! | TTTCTTTTTTATGCTTTCCT+TGG | - | chr4.3:85560287-85560306 | None:intergenic | 25.0% |
| AAACCAAGAAATAGACACAT+TGG | - | chr4.3:85561402-85561421 | None:intergenic | 30.0% | |
| ACCAAGATCAGTAAAAAGAA+TGG | - | chr4.3:85561472-85561491 | None:intergenic | 30.0% | |
| ACTTGCACTTTGTTAATGAT+AGG | + | chr4.3:85556647-85556666 | MS.gene034033:intron | 30.0% | |
| AGCAGAAGCAAAGAAAATAT+AGG | - | chr4.3:85556689-85556708 | None:intergenic | 30.0% | |
| AGTGTATCTAGTGTCTAATA+CGG | - | chr4.3:85560563-85560582 | None:intergenic | 30.0% | |
| ATATCATTTCCTCGTCAATT+TGG | + | chr4.3:85561144-85561163 | MS.gene034033:intron | 30.0% | |
| ATATCGTCAACAGATTTACT+AGG | + | chr4.3:85558270-85558289 | MS.gene034033:CDS | 30.0% | |
| ATCAGTAAAAAGAATGGCAA+GGG | - | chr4.3:85561466-85561485 | None:intergenic | 30.0% | |
| ATGTCATAATGATATGCAGA+AGG | - | chr4.3:85559379-85559398 | None:intergenic | 30.0% | |
| CAACAATAGATCACATAGTT+CGG | - | chr4.3:85560156-85560175 | None:intergenic | 30.0% | |
| CAATGTGTCATAGTTGTTAA+AGG | + | chr4.3:85558817-85558836 | MS.gene034033:intron | 30.0% | |
| CTCCTAGCAATATTTAATGT+TGG | + | chr4.3:85558245-85558264 | MS.gene034033:CDS | 30.0% | |
| CTTTATGTGAATGGTTTACT+AGG | + | chr4.3:85558524-85558543 | MS.gene034033:CDS | 30.0% | |
| GATTAAATTTCAGACTTCTG+TGG | + | chr4.3:85560792-85560811 | MS.gene034033:intron | 30.0% | |
| GCAAAGAAAATATAGGTAGT+TGG | - | chr4.3:85556682-85556701 | None:intergenic | 30.0% | |
| GGAATTATCAGTGATATAAG+AGG | + | chr4.3:85556475-85556494 | MS.gene034033:CDS | 30.0% | |
| GTGGTTAAAATCACCATTTA+AGG | + | chr4.3:85556453-85556472 | MS.gene034033:CDS | 30.0% | |
| TATCGTCAACAGATTTACTA+GGG | + | chr4.3:85558271-85558290 | MS.gene034033:CDS | 30.0% | |
| TCACTGATAATTCCCTTAAA+TGG | - | chr4.3:85556469-85556488 | None:intergenic | 30.0% | |
| TCTTCAATGTTGTATAGAGA+AGG | - | chr4.3:85558568-85558587 | None:intergenic | 30.0% | |
| TGAATGTATGATTCCACAAA+TGG | - | chr4.3:85557678-85557697 | None:intergenic | 30.0% | |
| TGAGATCAAATAGTGGTATA+GGG | - | chr4.3:85561615-85561634 | None:intergenic | 30.0% | |
| TGAGGAATAGTTATATGACA+TGG | + | chr4.3:85558846-85558865 | MS.gene034033:intron | 30.0% | |
| TGCCAACATTAAATATTGCT+AGG | - | chr4.3:85558250-85558269 | None:intergenic | 30.0% | |
| TTCAGTATCATATCAATGTC+AGG | - | chr4.3:85558697-85558716 | None:intergenic | 30.0% | |
| TTGAGATCAAATAGTGGTAT+AGG | - | chr4.3:85561616-85561635 | None:intergenic | 30.0% | |
| TTTAGCAAAGTTGTACAAGT+AGG | - | chr4.3:85557762-85557781 | None:intergenic | 30.0% | |
| ! | AAATTCCAACTTCTGTTTTG+TGG | + | chr4.3:85561004-85561023 | MS.gene034033:CDS | 30.0% |
| ! | AATTCCAACTTCTGTTTTGT+GGG | + | chr4.3:85561005-85561024 | MS.gene034033:CDS | 30.0% |
| ! | AATTTTCTTAATGACAGGCA+TGG | - | chr4.3:85560989-85561008 | None:intergenic | 30.0% |
| ! | AGCGTCTATTTTCACTATTT+GGG | - | chr4.3:85559771-85559790 | None:intergenic | 30.0% |
| ! | CATATTCTTACTAGGTTTTG+TGG | + | chr4.3:85559396-85559415 | MS.gene034033:CDS | 30.0% |
| ! | CTTATGAAGAGTTTGTTTGA+GGG | - | chr4.3:85556840-85556859 | None:intergenic | 30.0% |
| ! | CTTTTACAATCACTCTTTGT+TGG | + | chr4.3:85560949-85560968 | MS.gene034033:CDS | 30.0% |
| ! | GTTGGAATTTTCTTAATGAC+AGG | - | chr4.3:85560994-85561013 | None:intergenic | 30.0% |
| ! | TCTTATGAAGAGTTTGTTTG+AGG | - | chr4.3:85556841-85556860 | None:intergenic | 30.0% |
| ! | TTACTTTGATAACTGTCCAA+TGG | - | chr4.3:85559037-85559056 | None:intergenic | 30.0% |
| ! | TTTCCAATGTGTCTATTTCT+TGG | + | chr4.3:85561396-85561415 | MS.gene034033:CDS | 30.0% |
| ! | TTTGTAAAGCATTAGAGAGA+AGG | + | chr4.3:85559889-85559908 | MS.gene034033:intron | 30.0% |
| !! | ACATTTCAGACTTTGATTTG+TGG | + | chr4.3:85559529-85559548 | MS.gene034033:intron | 30.0% |
| !! | AGTTATACTTTTTGCAGTTG+TGG | + | chr4.3:85559193-85559212 | MS.gene034033:intron | 30.0% |
| !! | CATGGTCTTATTTATTGGAT+AGG | + | chr4.3:85558864-85558883 | MS.gene034033:intron | 30.0% |
| !! | GTCTTATTTATTGGATAGGT+TGG | + | chr4.3:85558868-85558887 | MS.gene034033:intron | 30.0% |
| !! | GTTATACTTTTTGCAGTTGT+GGG | + | chr4.3:85559194-85559213 | MS.gene034033:intron | 30.0% |
| !! | TATAAGCATTGCATTTTGCA+CGG | + | chr4.3:85559836-85559855 | MS.gene034033:intron | 30.0% |
| !! | TATTTTTGCAGGTTATTGGA+GGG | + | chr4.3:85561316-85561335 | MS.gene034033:intron | 30.0% |
| !! | TGTTAAACTAAAGCCTTGTT+TGG | + | chr4.3:85559061-85559080 | MS.gene034033:intron | 30.0% |
| !! | TGTTAGAATTTAGCTTGATG+TGG | - | chr4.3:85557133-85557152 | None:intergenic | 30.0% |
| !! | TTTTGCCAAAACAAAGCATT+AGG | - | chr4.3:85559509-85559528 | None:intergenic | 30.0% |
| !!! | AACCTATTTTTGCAGGTTAT+TGG | + | chr4.3:85561312-85561331 | MS.gene034033:intron | 30.0% |
| !!! | GTCTATTTCTTGGTTTGTTT+TGG | + | chr4.3:85561406-85561425 | MS.gene034033:CDS | 30.0% |
| AAACCATTATAACAGTTCGG+TGG | - | chr4.3:85561198-85561217 | None:intergenic | 35.0% | |
| AAACTTACCCAATACCAGAA+CGG | - | chr4.3:85556540-85556559 | None:intergenic | 35.0% | |
| AATTGGTACTGTTTCCACAA+AGG | - | chr4.3:85561353-85561372 | None:intergenic | 35.0% | |
| AATTTCAGACTTCTGTGGAA+AGG | + | chr4.3:85560797-85560816 | MS.gene034033:intron | 35.0% | |
| ACAACCTAATGCAACTATGA+TGG | - | chr4.3:85559944-85559963 | None:intergenic | 35.0% | |
| AGAGCAAGATCTTGGTTATA+TGG | + | chr4.3:85558593-85558612 | MS.gene034033:CDS | 35.0% | |
| AGTCTTCTTGGAATTTCAGA+AGG | - | chr4.3:85558978-85558997 | None:intergenic | 35.0% | |
| AGTTACAACTGTTCATGGTT+CGG | - | chr4.3:85561249-85561268 | None:intergenic | 35.0% | |
| ATTACCAGGAAGACTATCAA+TGG | - | chr4.3:85561049-85561068 | None:intergenic | 35.0% | |
| ATTCTCTGATAAGTGGATAC+CGG | + | chr4.3:85560025-85560044 | MS.gene034033:intron | 35.0% | |
| ATTTCAGACTTCTGTGGAAA+GGG | + | chr4.3:85560798-85560817 | MS.gene034033:intron | 35.0% | |
| ATTTCCATTGATCCAAAGCT+AGG | - | chr4.3:85561770-85561789 | None:intergenic | 35.0% | |
| CAAGTAGGTATACATGATGA+TGG | - | chr4.3:85557747-85557766 | None:intergenic | 35.0% | |
| CTCCAATAACCTGCAAAAAT+AGG | - | chr4.3:85561317-85561336 | None:intergenic | 35.0% | |
| CTTTGCTCATTTACTCTAAC+AGG | - | chr4.3:85560919-85560938 | None:intergenic | 35.0% | |
| GAGCAAGATCTTGGTTATAT+GGG | + | chr4.3:85558594-85558613 | MS.gene034033:CDS | 35.0% | |
| GATCAGTAAAAAGAATGGCA+AGG | - | chr4.3:85561467-85561486 | None:intergenic | 35.0% | |
| GATGAATTAACTACAAGCAG+AGG | + | chr4.3:85561809-85561828 | MS.gene034033:CDS | 35.0% | |
| GCTAAAAATAAGGATGGCTT+GGG | + | chr4.3:85557776-85557795 | MS.gene034033:CDS | 35.0% | |
| GCTGAATATGAAGAAATTGC+TGG | + | chr4.3:85561550-85561569 | MS.gene034033:CDS | 35.0% | |
| GGAACTAGAGAACTTAAAAG+AGG | + | chr4.3:85560819-85560838 | MS.gene034033:CDS | 35.0% | |
| GGTCATTAAGGTTCCATATT+TGG | - | chr4.3:85562142-85562161 | None:intergenic | 35.0% | |
| GTAGATGATCAGAAGAAAGA+TGG | + | chr4.3:85560252-85560271 | MS.gene034033:intron | 35.0% | |
| GTTCATTCAAGAGGCTATTA+AGG | + | chr4.3:85558331-85558350 | MS.gene034033:CDS | 35.0% | |
| TCACATAAAGCCAGTGAAAT+TGG | - | chr4.3:85558514-85558533 | None:intergenic | 35.0% | |
| TCTTCCTGGTAATCAATTCT+GGG | + | chr4.3:85561056-85561075 | MS.gene034033:CDS | 35.0% | |
| TGCTAAAAATAAGGATGGCT+TGG | + | chr4.3:85557775-85557794 | MS.gene034033:CDS | 35.0% | |
| TGTCTATGAAACGTAGACAT+CGG | + | chr4.3:85561657-85561676 | MS.gene034033:intron | 35.0% | |
| TTAGTATGCATAGGAGATTG+AGG | - | chr4.3:85559589-85559608 | None:intergenic | 35.0% | |
| TTGAGTTCAATTTATGCTGC+AGG | + | chr4.3:85559222-85559241 | MS.gene034033:intron | 35.0% | |
| ! | AATGATTTGCATTGCATGCA+GGG | + | chr4.3:85562215-85562234 | MS.gene034033:intron | 35.0% |
| ! | ACTATTTGGGATCAGTTACA+TGG | - | chr4.3:85559758-85559777 | None:intergenic | 35.0% |
| ! | ATGATTTTAAATCGCGGTTG+TGG | - | chr4.3:85561276-85561295 | None:intergenic | 35.0% |
| ! | ATTCCAACTTCTGTTTTGTG+GGG | + | chr4.3:85561006-85561025 | MS.gene034033:CDS | 35.0% |
| ! | ATTTTCTCAGGGTTTGTGTA+TGG | + | chr4.3:85558204-85558223 | MS.gene034033:intron | 35.0% |
| ! | CAGCGTCTATTTTCACTATT+TGG | - | chr4.3:85559772-85559791 | None:intergenic | 35.0% |
| ! | GAGATTCTGAAAATTCGAGA+TGG | + | chr4.3:85557221-85557240 | MS.gene034033:intron | 35.0% |
| ! | GATGTTTGACCACCAATTTT+TGG | + | chr4.3:85557020-85557039 | MS.gene034033:intron | 35.0% |
| ! | GCCATTCTTTTTACTGATCT+TGG | + | chr4.3:85561468-85561487 | MS.gene034033:CDS | 35.0% |
| ! | TCTTTTTACTGATCTTGGTG+AGG | + | chr4.3:85561473-85561492 | MS.gene034033:CDS | 35.0% |
| !! | AATACACGAGGTTTGTTACA+TGG | - | chr4.3:85560008-85560027 | None:intergenic | 35.0% |
| !! | ACTTTGATTTGTGGACTACT+TGG | + | chr4.3:85559538-85559557 | MS.gene034033:CDS | 35.0% |
| !! | AGAAGCTTTATTGCAGACTA+TGG | + | chr4.3:85558894-85558913 | MS.gene034033:CDS | 35.0% |
| !! | CAGAACTTTAAGCTTTAGAG+AGG | + | chr4.3:85561844-85561863 | MS.gene034033:CDS | 35.0% |
| !! | TAGGTATACATGATGATGGT+GGG | - | chr4.3:85557743-85557762 | None:intergenic | 35.0% |
| !! | TTCAGTCTTGTTCATTCAAG+AGG | + | chr4.3:85558322-85558341 | MS.gene034033:CDS | 35.0% |
| !! | TTGATCATAGTGTTGCTTCT+GGG | + | chr4.3:85559320-85559339 | MS.gene034033:CDS | 35.0% |
| !! | TTTCACTGGCTTTATGTGAA+TGG | + | chr4.3:85558515-85558534 | MS.gene034033:CDS | 35.0% |
| !! | TTTGATCATAGTGTTGCTTC+TGG | + | chr4.3:85559319-85559338 | MS.gene034033:CDS | 35.0% |
| !!! | AAGACTTTTTCACTTGTGCA+CGG | - | chr4.3:85557935-85557954 | None:intergenic | 35.0% |
| !!! | ACAAGAACTCTTTTTGGCTT+GGG | + | chr4.3:85557799-85557818 | MS.gene034033:CDS | 35.0% |
| !!! | CTATTTTTGCAGGTTATTGG+AGG | + | chr4.3:85561315-85561334 | MS.gene034033:intron | 35.0% |
| !!! | TCAAGTCAACCTATTTTTGC+AGG | + | chr4.3:85561305-85561324 | MS.gene034033:intron | 35.0% |
| AAAGATGCAAGCAGTGTTTG+TGG | + | chr4.3:85560330-85560349 | MS.gene034033:CDS | 40.0% | |
| AAAGATGGTTGAAACTGCCA+AGG | + | chr4.3:85560267-85560286 | MS.gene034033:CDS | 40.0% | |
| AATCTCCATCTTTGCACCAT+TGG | + | chr4.3:85559018-85559037 | MS.gene034033:CDS | 40.0% | |
| ACGTCACATAAGTCACGTAA+TGG | - | chr4.3:85557982-85558001 | None:intergenic | 40.0% | |
| ACTTACTTGAACCACCTACT+AGG | - | chr4.3:85561108-85561127 | None:intergenic | 40.0% | |
| AGATCTTGGTTATATGGGAC+AGG | + | chr4.3:85558599-85558618 | MS.gene034033:CDS | 40.0% | |
| ATATGCGGTGGTCCAAAAAT+TGG | - | chr4.3:85557035-85557054 | None:intergenic | 40.0% | |
| ATGAAAAAGACACGTGTGCA+TGG | + | chr4.3:85558014-85558033 | MS.gene034033:intron | 40.0% | |
| ATTGAGCACAGTAGAAACAC+TGG | + | chr4.3:85557643-85557662 | MS.gene034033:CDS | 40.0% | |
| CAATTTATGCTGCAGGACAT+GGG | + | chr4.3:85559229-85559248 | MS.gene034033:intron | 40.0% | |
| CACTTATCAGAGAATACACG+AGG | - | chr4.3:85560020-85560039 | None:intergenic | 40.0% | |
| CAGAACAGTACCAATTTCAC+TGG | + | chr4.3:85558501-85558520 | MS.gene034033:CDS | 40.0% | |
| CAGACACAACACTACACTAT+CGG | + | chr4.3:85560482-85560501 | MS.gene034033:intron | 40.0% | |
| CATACACTCAAAGAGAGTCT+TGG | - | chr4.3:85561580-85561599 | None:intergenic | 40.0% | |
| CATCTAGAGGTGAAGTGTAT+TGG | - | chr4.3:85557068-85557087 | None:intergenic | 40.0% | |
| CATGCATCAATATGCTTCTC+AGG | - | chr4.3:85560892-85560911 | None:intergenic | 40.0% | |
| CGACACTGACATGTAGATAT+CGG | + | chr4.3:85561689-85561708 | MS.gene034033:intron | 40.0% | |
| CTCGTGTATTCTCTGATAAG+TGG | + | chr4.3:85560018-85560037 | MS.gene034033:intron | 40.0% | |
| CTGAAAATTCGAGATGGAGA+AGG | + | chr4.3:85557227-85557246 | MS.gene034033:intron | 40.0% | |
| CTTTCCCAGAATTGATTACC+AGG | - | chr4.3:85561063-85561082 | None:intergenic | 40.0% | |
| GAACTGAACCTGACTGTTAA+TGG | - | chr4.3:85561176-85561195 | None:intergenic | 40.0% | |
| GAGTCCATCATAGTTGCATT+AGG | + | chr4.3:85559937-85559956 | MS.gene034033:intron | 40.0% | |
| GGAAACAAGATTCCAGCTAT+TGG | - | chr4.3:85561445-85561464 | None:intergenic | 40.0% | |
| GGAATGAACCATTAACAGTC+AGG | + | chr4.3:85561165-85561184 | MS.gene034033:intron | 40.0% | |
| GTCCATACTACCACCAAAAA+AGG | - | chr4.3:85558924-85558943 | None:intergenic | 40.0% | |
| GTCTTCCTGGTAATCAATTC+TGG | + | chr4.3:85561055-85561074 | MS.gene034033:CDS | 40.0% | |
| GTTCCACCGAACTGTTATAA+TGG | + | chr4.3:85561192-85561211 | MS.gene034033:intron | 40.0% | |
| GTTGCAGTTACAACTGTTCA+TGG | - | chr4.3:85561254-85561273 | None:intergenic | 40.0% | |
| TATCCCCACAAAACAGAAGT+TGG | - | chr4.3:85561012-85561031 | None:intergenic | 40.0% | |
| TCAATTTATGCTGCAGGACA+TGG | + | chr4.3:85559228-85559247 | MS.gene034033:intron | 40.0% | |
| TGAGGAAGAACACCATTTGA+AGG | - | chr4.3:85559571-85559590 | None:intergenic | 40.0% | |
| TGGTGAGGACTAAAGAACTT+GGG | - | chr4.3:85561511-85561530 | None:intergenic | 40.0% | |
| TGGTTCATTCCAAATTGACG+AGG | - | chr4.3:85561156-85561175 | None:intergenic | 40.0% | |
| TGTCAACGTCTCTTTCAGAT+CGG | - | chr4.3:85560126-85560145 | None:intergenic | 40.0% | |
| TGTCTAATACGGACATGACA+CGG | - | chr4.3:85560552-85560571 | None:intergenic | 40.0% | |
| TTCTCTTTGTGTCACCTAGT+AGG | + | chr4.3:85561091-85561110 | MS.gene034033:CDS | 40.0% | |
| ! | AGGGTTGCTGAAGAACTTTT+TGG | + | chr4.3:85558290-85558309 | MS.gene034033:CDS | 40.0% |
| ! | CAAATGGATTCACCTAGCTT+TGG | + | chr4.3:85561755-85561774 | MS.gene034033:CDS | 40.0% |
| ! | CAATGATTTGCATTGCATGC+AGG | + | chr4.3:85562214-85562233 | MS.gene034033:intron | 40.0% |
| ! | CCTTATTTCCATACACTCTC+CGG | + | chr4.3:85562052-85562071 | MS.gene034033:intron | 40.0% |
| ! | CTGGTAATCAATTCTGGGAA+AGG | + | chr4.3:85561061-85561080 | MS.gene034033:CDS | 40.0% |
| ! | CTTGGGACAAGAACTCTTTT+TGG | + | chr4.3:85557793-85557812 | MS.gene034033:CDS | 40.0% |
| ! | TAGAGGTGAAGTGTATTGGT+GGG | - | chr4.3:85557064-85557083 | None:intergenic | 40.0% |
| ! | TGCTTTTATTCCTGCCTTGA+TGG | + | chr4.3:85559279-85559298 | MS.gene034033:CDS | 40.0% |
| !! | AGCTTTAGAGAGGAAAGACA+TGG | + | chr4.3:85561854-85561873 | MS.gene034033:CDS | 40.0% |
| !! | CAGCTGCATCTAGTTCTTTA+AGG | - | chr4.3:85561534-85561553 | None:intergenic | 40.0% |
| !! | CTGCATCTAGTTCTTTAAGG+TGG | - | chr4.3:85561531-85561550 | None:intergenic | 40.0% |
| !! | GCTAGCAACTCTGAAATCTA+TGG | + | chr4.3:85560307-85560326 | MS.gene034033:CDS | 40.0% |
| !! | GTAGGTATACATGATGATGG+TGG | - | chr4.3:85557744-85557763 | None:intergenic | 40.0% |
| !! | TCTAGTTCTTTAAGGTGGTG+AGG | - | chr4.3:85561526-85561545 | None:intergenic | 40.0% |
| !! | TTCACCTAGCTTTGGATCAA+TGG | + | chr4.3:85561763-85561782 | MS.gene034033:CDS | 40.0% |
| !!! | AGACTATGGTGTGCCTTTTT+TGG | + | chr4.3:85558908-85558927 | MS.gene034033:CDS | 40.0% |
| !!! | GACAAGAACTCTTTTTGGCT+TGG | + | chr4.3:85557798-85557817 | MS.gene034033:CDS | 40.0% |
| !!! | TGCCTTTTTTGGTGGTAGTA+TGG | + | chr4.3:85558919-85558938 | MS.gene034033:CDS | 40.0% |
| !!! | TGGTTTGTTTTGGAGTGACA+TGG | + | chr4.3:85561416-85561435 | MS.gene034033:CDS | 40.0% |
| AAGAGCCTCTCAGTTCTCAA+GGG | + | chr4.3:85559607-85559626 | MS.gene034033:CDS | 45.0% | |
| ACACAGACACGACACAATCA+TGG | + | chr4.3:85560634-85560653 | MS.gene034033:intron | 45.0% | |
| ACTGTCCAATGGTGCAAAGA+TGG | - | chr4.3:85559026-85559045 | None:intergenic | 45.0% | |
| AGAGCAGAAGAGCAAGATCT+TGG | + | chr4.3:85558585-85558604 | MS.gene034033:CDS | 45.0% | |
| ATGATTGTGTCGTGTCTGTG+TGG | - | chr4.3:85560635-85560654 | None:intergenic | 45.0% | |
| ATGCAGCAGCAGAAGCAAAA+AGG | - | chr4.3:85556908-85556927 | None:intergenic | 45.0% | |
| CTAGAGGTGAAGTGTATTGG+TGG | - | chr4.3:85557065-85557084 | None:intergenic | 45.0% | |
| CTTGGCTTACCTCCTTCAAA+TGG | + | chr4.3:85559556-85559575 | MS.gene034033:CDS | 45.0% | |
| GAAAGACATGGTCAGGTAAG+TGG | + | chr4.3:85561866-85561885 | MS.gene034033:intron | 45.0% | |
| GAGAGGCTCTTAGTATGCAT+AGG | - | chr4.3:85559598-85559617 | None:intergenic | 45.0% | |
| GCAAGCAGTGTTTGTGGAAA+TGG | + | chr4.3:85560336-85560355 | MS.gene034033:CDS | 45.0% | |
| GCTTTGCCTGTTATTGCCTT+TGG | + | chr4.3:85556706-85556725 | MS.gene034033:CDS | 45.0% | |
| GGAAGAACACCATTTGAAGG+AGG | - | chr4.3:85559568-85559587 | None:intergenic | 45.0% | |
| GGTGAGGACTAAAGAACTTG+GGG | - | chr4.3:85561510-85561529 | None:intergenic | 45.0% | |
| GTGACATGGATTCCAATAGC+TGG | + | chr4.3:85561430-85561449 | MS.gene034033:CDS | 45.0% | |
| GTGCTTTCCGTTCTGGTATT+GGG | + | chr4.3:85556530-85556549 | MS.gene034033:CDS | 45.0% | |
| GTGGGGATACTTTGCATACA+TGG | + | chr4.3:85561023-85561042 | MS.gene034033:CDS | 45.0% | |
| GTGGTGAGGACTAAAGAACT+TGG | - | chr4.3:85561512-85561531 | None:intergenic | 45.0% | |
| GTTCTGCAACTCCTACAATG+AGG | - | chr4.3:85557721-85557740 | None:intergenic | 45.0% | |
| TAAGAGCCTCTCAGTTCTCA+AGG | + | chr4.3:85559606-85559625 | MS.gene034033:CDS | 45.0% | |
| TAGAGAGGAAAGACATGGTC+AGG | + | chr4.3:85561859-85561878 | MS.gene034033:CDS | 45.0% | |
| TCTTTGTGTCACCTAGTAGG+TGG | + | chr4.3:85561094-85561113 | MS.gene034033:CDS | 45.0% | |
| TGCTCACCAAAGGCAATAAC+AGG | - | chr4.3:85556715-85556734 | None:intergenic | 45.0% | |
| TGTGCTTTCCGTTCTGGTAT+TGG | + | chr4.3:85556529-85556548 | MS.gene034033:CDS | 45.0% | |
| TTCCATACACTCTCCGGAAT+AGG | + | chr4.3:85562058-85562077 | MS.gene034033:intron | 45.0% | |
| ! | AACCTATTCCGGAGAGTGTA+TGG | - | chr4.3:85562063-85562082 | None:intergenic | 45.0% |
| ! | ACTAGTTGCTCCTCTAGCTT+GGG | + | chr4.3:85558995-85559014 | MS.gene034033:CDS | 45.0% |
| ! | ACTGTTCATGGTTCGGACTT+CGG | - | chr4.3:85561242-85561261 | None:intergenic | 45.0% |
| ! | ATGGCCATTGATAGTCTTCC+TGG | + | chr4.3:85561042-85561061 | MS.gene034033:CDS | 45.0% |
| ! | CCGGAGAGTGTATGGAAATA+AGG | - | chr4.3:85562055-85562074 | None:intergenic | 45.0% |
| !! | AGAGGAGCAACTAGTCTTCT+TGG | - | chr4.3:85558990-85559009 | None:intergenic | 45.0% |
| !! | ATTGGTGGGCTAGACATATG+CGG | - | chr4.3:85557050-85557069 | None:intergenic | 45.0% |
| !! | TCATAGTGTTGCTTCTGGGA+TGG | + | chr4.3:85559324-85559343 | MS.gene034033:CDS | 45.0% |
| !!! | CTATGGTGTGCCTTTTTTGG+TGG | + | chr4.3:85558911-85558930 | MS.gene034033:CDS | 45.0% |
| !! | AAAAAAAAATTCAAATAAAA+CGG | - | chr4.3:85558115-85558134 | None:intergenic | 5.0% |
| !! | TATTAATGATTAAATTAAAT+GGG | + | chr4.3:85560200-85560219 | MS.gene034033:intron | 5.0% |
| CAACACGACACTGACACATG+TGG | - | chr4.3:85560711-85560730 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCGTGT+TGG | + | chr4.3:85560709-85560728 | MS.gene034033:intron | 50.0% | |
| CTCCTACAATGAGGAGTGGT+TGG | - | chr4.3:85557712-85557731 | None:intergenic | 50.0% | |
| CTGGCTTCTACAGCCATTTG+TGG | + | chr4.3:85557662-85557681 | MS.gene034033:CDS | 50.0% | |
| GAGGACTAAAGAACTTGGGG+AGG | - | chr4.3:85561507-85561526 | None:intergenic | 50.0% | |
| GATGGAGATTCCCAAGCTAG+AGG | - | chr4.3:85559008-85559027 | None:intergenic | 50.0% | |
| GCAACTCCTACAATGAGGAG+TGG | - | chr4.3:85557716-85557735 | None:intergenic | 50.0% | |
| GGGTCATCATGCTTCCTTTG+TGG | + | chr4.3:85561336-85561355 | MS.gene034033:CDS | 50.0% | |
| GTAAAGCCCTGCTACCATCA+AGG | - | chr4.3:85559296-85559315 | None:intergenic | 50.0% | |
| TATGCTGCAGGACATGGGAA+GGG | + | chr4.3:85559234-85559253 | MS.gene034033:intron | 50.0% | |
| TCAGTTCTCAAGGGTCTGGT+AGG | + | chr4.3:85559616-85559635 | MS.gene034033:intron | 50.0% | |
| TCGATTCAGCTGCTCACCAA+AGG | - | chr4.3:85556725-85556744 | None:intergenic | 50.0% | |
| TCTCTTTCAGATCGGCAGCA+GGG | - | chr4.3:85560118-85560137 | None:intergenic | 50.0% | |
| TGCGGTGGTCCAAAAATTGG+TGG | - | chr4.3:85557032-85557051 | None:intergenic | 50.0% | |
| TGGACTTGTGCTTTCCGTTC+TGG | + | chr4.3:85556523-85556542 | MS.gene034033:CDS | 50.0% | |
| TTAGTCTCCACAGTTACGCG+CGG | - | chr4.3:85556816-85556835 | None:intergenic | 50.0% | |
| TTATGCTGCAGGACATGGGA+AGG | + | chr4.3:85559233-85559252 | MS.gene034033:intron | 50.0% | |
| ! | ATTCCTGCCTTGATGGTAGC+AGG | + | chr4.3:85559286-85559305 | MS.gene034033:CDS | 50.0% |
| ! | GACTAGTTGCTCCTCTAGCT+TGG | + | chr4.3:85558994-85559013 | MS.gene034033:CDS | 50.0% |
| ! | TTCCTGCCTTGATGGTAGCA+GGG | + | chr4.3:85559287-85559306 | MS.gene034033:CDS | 50.0% |
| !! | TTCTGGGATGGCACAACAGA+AGG | + | chr4.3:85559336-85559355 | MS.gene034033:CDS | 50.0% |
| !!! | GAACTCTTTTTGGCTTGGGC+TGG | + | chr4.3:85557803-85557822 | MS.gene034033:CDS | 50.0% |
| !!! | TCTTTTTGGCTTGGGCTGGA+TGG | + | chr4.3:85557807-85557826 | MS.gene034033:CDS | 50.0% |
| CCAGACCCTTGAGAACTGAG+AGG | - | chr4.3:85559615-85559634 | None:intergenic | 55.0% | |
| CCTCTCAGTTCTCAAGGGTC+TGG | + | chr4.3:85559612-85559631 | MS.gene034033:CDS | 55.0% | |
| GAGCAGCTGAATCGAGACAC+AGG | + | chr4.3:85556730-85556749 | MS.gene034033:CDS | 55.0% | |
| GGCCAACCACTCCTCATTGT+AGG | + | chr4.3:85557707-85557726 | MS.gene034033:CDS | 55.0% | |
| GTATCATCCGCGCGTAACTG+TGG | + | chr4.3:85556806-85556825 | MS.gene034033:intron | 55.0% | |
| GTCTCTTTCAGATCGGCAGC+AGG | - | chr4.3:85560119-85560138 | None:intergenic | 55.0% | |
| AGCCCTGCTACCATCAAGGC+AGG | - | chr4.3:85559292-85559311 | None:intergenic | 60.0% | |
| CTTTCAGATCGGCAGCAGGG+TGG | - | chr4.3:85560115-85560134 | None:intergenic | 60.0% | |
| !! | GGTGGGCTAGACATATGCGG+TGG | - | chr4.3:85557047-85557066 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 85556448 | 85562292 | 85556448 | ID=MS.gene034033 |
| chr4.3 | mRNA | 85556448 | 85562292 | 85556448 | ID=MS.gene034033.t1;Parent=MS.gene034033 |
| chr4.3 | exon | 85556448 | 85556551 | 85556448 | ID=MS.gene034033.t1.exon1;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85556448 | 85556551 | 85556448 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85556669 | 85556751 | 85556669 | ID=MS.gene034033.t1.exon2;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85556669 | 85556751 | 85556669 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85557636 | 85557828 | 85557636 | ID=MS.gene034033.t1.exon3;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85557636 | 85557828 | 85557636 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85558214 | 85558352 | 85558214 | ID=MS.gene034033.t1.exon4;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85558214 | 85558352 | 85558214 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85558455 | 85558620 | 85558455 | ID=MS.gene034033.t1.exon5;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85558455 | 85558620 | 85558455 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85558886 | 85559052 | 85558886 | ID=MS.gene034033.t1.exon6;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85558886 | 85559052 | 85558886 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85559244 | 85559417 | 85559244 | ID=MS.gene034033.t1.exon7;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85559244 | 85559417 | 85559244 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85559538 | 85559633 | 85559538 | ID=MS.gene034033.t1.exon8;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85559538 | 85559633 | 85559538 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85560256 | 85560372 | 85560256 | ID=MS.gene034033.t1.exon9;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85560256 | 85560372 | 85560256 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85560805 | 85561121 | 85560805 | ID=MS.gene034033.t1.exon10;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85560805 | 85561121 | 85560805 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85561327 | 85561594 | 85561327 | ID=MS.gene034033.t1.exon11;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85561327 | 85561594 | 85561327 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85561755 | 85561880 | 85561755 | ID=MS.gene034033.t1.exon12;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85561755 | 85561880 | 85561755 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| chr4.3 | exon | 85562236 | 85562292 | 85562236 | ID=MS.gene034033.t1.exon13;Parent=MS.gene034033.t1 |
| chr4.3 | CDS | 85562236 | 85562292 | 85562236 | ID=cds.MS.gene034033.t1;Parent=MS.gene034033.t1 |
| Gene Sequence |
| Protein sequence |
