Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37317.t1 | PNY17407.1 | 88 | 642 | 46 | 4 | 11 | 650 | 3 | 615 | 0.00E+00 | 1112.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37317.t1 | Q9XI23 | 71.1 | 655 | 180 | 3 | 5 | 650 | 10 | 664 | 6.3e-274 | 944.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37317.t1 | A0A2K3PQ58 | 88.0 | 642 | 46 | 4 | 11 | 650 | 3 | 615 | 0.0e+00 | 1112.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene37317 | -0.828242 | 1.00E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene37317 | -0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene37317 | -0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene37317 | 0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene049549 | MS.gene37317 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene37317 | 0.802957 | 4.38E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene37317 | -0.821201 | 4.58E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene37317 | -0.811369 | 7.25E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene37317 | -0.811149 | 8.09E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene37317 | -0.815756 | 7.85E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene37317 | -0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene37317 | -0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene37317 | -0.8108 | 9.63E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene37317 | -0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene37317 | -0.809033 | 2.31E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene37317 | 0.81372 | 2.22E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene37317 | 0.80248 | 5.50E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene37317 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene37317 | 0.80034 | 1.51E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene37317 | 0.831871 | 1.31E-55 | -1.69E-46 |
| MS.gene05244 | MS.gene37317 | 0.808659 | 2.78E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene37317 | -0.821778 | 3.37E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene37317 | 0.811501 | 6.78E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene37317 | -0.820283 | 7.44E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene37317 | -0.81413 | 1.80E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene37317 | -0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene37317 | 0.802525 | 5.38E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene37317 | -0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene37317 | -0.805151 | 1.53E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene37317 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene37317 | -0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene37317 | 0.851443 | 8.85E-61 | -1.69E-46 |
| MS.gene05470 | MS.gene37317 | -0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene37317 | 0.822653 | 2.11E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene37317 | -0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene37317 | 0.80703 | 6.17E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene37317 | -0.800105 | 1.68E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene37317 | -0.825685 | 4.10E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene37317 | -0.809294 | 2.03E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene37317 | -0.826816 | 2.20E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene37317 | 0.819501 | 1.12E-52 | -1.69E-46 |
| MS.gene056359 | MS.gene37317 | 0.814369 | 1.60E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene37317 | -0.835664 | 1.47E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene37317 | 0.865487 | 5.70E-65 | -1.69E-46 |
| MS.gene056591 | MS.gene37317 | 0.865795 | 4.56E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene37317 | -0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene056694 | MS.gene37317 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene37317 | 0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene37317 | 0.819667 | 1.03E-52 | -1.69E-46 |
| MS.gene056857 | MS.gene37317 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene37317 | 0.804334 | 2.27E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene37317 | 0.800673 | 1.29E-48 | -1.69E-46 |
| MS.gene058099 | MS.gene37317 | 0.831429 | 1.68E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene37317 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene37317 | 0.806424 | 8.28E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene37317 | -0.817386 | 3.39E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene37317 | -0.842208 | 2.98E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene37317 | -0.809045 | 2.30E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene37317 | -0.803381 | 3.58E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene37317 | -0.818239 | 2.17E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene37317 | -0.812607 | 3.89E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene37317 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene37317 | -0.82358 | 1.28E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene37317 | 0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene37317 | 0.815325 | 9.79E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene37317 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene37317 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene37317 | -0.81099 | 8.76E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene37317 | -0.811118 | 8.21E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene37317 | 0.802329 | 5.91E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81622 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene81620 | PPI |
| MS.gene016743 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene057883 | PPI |
| MS.gene37317 | MS.gene42533 | PPI |
| MS.gene37317 | MS.gene016758 | PPI |
| MS.gene014805 | MS.gene37317 | PPI |
| MS.gene37911 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene61680 | PPI |
| MS.gene37317 | MS.gene070492 | PPI |
| MS.gene37317 | MS.gene070511 | PPI |
| MS.gene37317 | MS.gene057884 | PPI |
| MS.gene070505 | MS.gene37317 | PPI |
| MS.gene057886 | MS.gene37317 | PPI |
| MS.gene070509 | MS.gene37317 | PPI |
| MS.gene32602 | MS.gene37317 | PPI |
| MS.gene015968 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene070510 | PPI |
| MS.gene072928 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene60262 | PPI |
| MS.gene37317 | MS.gene67840 | PPI |
| MS.gene81615 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene81617 | PPI |
| MS.gene37317 | MS.gene017877 | PPI |
| MS.gene37317 | MS.gene39051 | PPI |
| MS.gene37317 | MS.gene014107 | PPI |
| MS.gene016742 | MS.gene37317 | PPI |
| MS.gene37317 | MS.gene070503 | PPI |
| MS.gene37317 | MS.gene070507 | PPI |
| MS.gene37317 | MS.gene51559 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37317.t1 | MTR_0459s0020 | 78.086 | 648 | 135 | 4 | 1 | 641 | 9 | 656 | 0.0 | 1027 |
| MS.gene37317.t1 | MTR_3g107730 | 68.092 | 655 | 198 | 4 | 4 | 650 | 1 | 652 | 0.0 | 915 |
| MS.gene37317.t1 | MTR_0366s0020 | 69.922 | 645 | 109 | 3 | 1 | 641 | 9 | 572 | 0.0 | 886 |
| MS.gene37317.t1 | MTR_1g011840 | 65.997 | 647 | 211 | 3 | 7 | 647 | 3 | 646 | 0.0 | 884 |
| MS.gene37317.t1 | MTR_3g107730 | 70.349 | 516 | 150 | 1 | 4 | 519 | 1 | 513 | 0.0 | 774 |
| MS.gene37317.t1 | MTR_7g110000 | 58.269 | 647 | 258 | 4 | 7 | 642 | 7 | 652 | 0.0 | 753 |
| MS.gene37317.t1 | MTR_3g077670 | 58.476 | 643 | 254 | 7 | 7 | 637 | 7 | 648 | 0.0 | 728 |
| MS.gene37317.t1 | MTR_2g032690 | 57.098 | 641 | 263 | 5 | 7 | 637 | 7 | 645 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37317.t1 | AT1G15460 | 71.145 | 655 | 180 | 3 | 5 | 650 | 10 | 664 | 0.0 | 979 |
| MS.gene37317.t1 | AT1G15460 | 71.145 | 655 | 180 | 3 | 5 | 650 | 10 | 664 | 0.0 | 979 |
| MS.gene37317.t1 | AT1G74810 | 68.397 | 655 | 198 | 4 | 5 | 650 | 10 | 664 | 0.0 | 940 |
| MS.gene37317.t1 | AT1G74810 | 68.397 | 655 | 198 | 4 | 5 | 650 | 10 | 664 | 0.0 | 940 |
| MS.gene37317.t1 | AT1G74810 | 68.397 | 655 | 198 | 4 | 5 | 650 | 10 | 664 | 0.0 | 940 |
| MS.gene37317.t1 | AT1G15460 | 72.330 | 618 | 162 | 3 | 5 | 613 | 10 | 627 | 0.0 | 937 |
| MS.gene37317.t1 | AT1G74810 | 68.750 | 624 | 186 | 4 | 36 | 650 | 9 | 632 | 0.0 | 895 |
| MS.gene37317.t1 | AT1G74810 | 68.750 | 624 | 186 | 4 | 36 | 650 | 9 | 632 | 0.0 | 895 |
| MS.gene37317.t1 | AT4G32510 | 65.309 | 663 | 214 | 5 | 1 | 647 | 1 | 663 | 0.0 | 890 |
| MS.gene37317.t1 | AT4G32510 | 65.309 | 663 | 214 | 5 | 1 | 647 | 1 | 663 | 0.0 | 890 |
| MS.gene37317.t1 | AT5G25430 | 65.278 | 648 | 216 | 2 | 7 | 645 | 9 | 656 | 0.0 | 883 |
| MS.gene37317.t1 | AT1G15460 | 70.072 | 558 | 158 | 3 | 102 | 650 | 1 | 558 | 0.0 | 816 |
| MS.gene37317.t1 | AT1G74810 | 67.384 | 558 | 173 | 4 | 102 | 650 | 1 | 558 | 0.0 | 782 |
| MS.gene37317.t1 | AT3G62270 | 59.624 | 639 | 249 | 4 | 7 | 637 | 7 | 644 | 0.0 | 771 |
| MS.gene37317.t1 | AT2G47160 | 59.531 | 640 | 247 | 4 | 7 | 637 | 7 | 643 | 0.0 | 768 |
| MS.gene37317.t1 | AT2G47160 | 57.293 | 665 | 247 | 5 | 7 | 637 | 7 | 668 | 0.0 | 755 |
| MS.gene37317.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene37317.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene37317.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene37317.t1 | AT3G06450 | 55.748 | 635 | 277 | 2 | 7 | 637 | 9 | 643 | 0.0 | 749 |
| MS.gene37317.t1 | AT1G74810 | 67.370 | 521 | 161 | 4 | 139 | 650 | 1 | 521 | 0.0 | 726 |
Find 126 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTGCATCTAGTTCTTTA+AGG | 0.119813 | 4.4:-88005072 | None:intergenic |
| GGAATCATACATTCAATTAT+TGG | 0.192328 | 4.4:+88001348 | MS.gene37317:CDS |
| GTCTTCCTGGTAATCAATTC+TGG | 0.223462 | 4.4:+88004596 | MS.gene37317:CDS |
| TTTGATCATAGTGTTGCTTC+TGG | 0.240147 | 4.4:+88002864 | MS.gene37317:CDS |
| TTTCCAATGTGTCTATTTCT+TGG | 0.240352 | 4.4:+88004937 | MS.gene37317:CDS |
| GTCTATTTCTTGGTTTGTTT+TGG | 0.242089 | 4.4:+88004947 | MS.gene37317:CDS |
| GTTCATTCAAGAGGCTATTA+AGG | 0.247348 | 4.4:+88002008 | MS.gene37317:CDS |
| CTTTGCTCATTTACTCTAAC+AGG | 0.255775 | 4.4:-88004457 | None:intergenic |
| TGTGCTTTCCGTTCTGGTAT+TGG | 0.264166 | 4.4:+87999607 | MS.gene37317:CDS |
| TGGACTTGTGCTTTCCGTTC+TGG | 0.268770 | 4.4:+87999601 | MS.gene37317:CDS |
| CTTTGTTAATGATAGGATAT+TGG | 0.271262 | 4.4:+87999731 | MS.gene37317:intron |
| AGAGCAAGATCTTGGTTATA+TGG | 0.279601 | 4.4:+88002270 | MS.gene37317:CDS |
| TCACTGATAATTCCCTTAAA+AGG | 0.289770 | 4.4:-87999544 | None:intergenic |
| TTAAAAGAGGTAATCTTAAA+AGG | 0.294451 | 4.4:+88004373 | MS.gene37317:CDS |
| CATTATGACATATTCTTACT+AGG | 0.298991 | 4.4:+88002933 | MS.gene37317:CDS |
| TCACATAAAGCCAGTGAAAT+TGG | 0.304348 | 4.4:-88002188 | None:intergenic |
| GTGCTTTCCGTTCTGGTATT+GGG | 0.307157 | 4.4:+87999608 | MS.gene37317:CDS |
| CTTTATGTGAATGGTTTACT+AGG | 0.330252 | 4.4:+88002201 | MS.gene37317:CDS |
| GCTTTGCCTGTTATTGCCTT+TGG | 0.333578 | 4.4:+87999783 | MS.gene37317:CDS |
| AAGAAGACTATGTATCTAAT+TGG | 0.335535 | 4.4:-88004908 | None:intergenic |
| TTCACCTAGCTTTGGATCAA+TGG | 0.338378 | 4.4:+88005305 | MS.gene37317:CDS |
| GCTAGCAACTCTGAAATCTA+TGG | 0.346046 | 4.4:+88003848 | MS.gene37317:CDS |
| GGAAACAAGATTCCAGCTAT+TGG | 0.355801 | 4.4:-88004983 | None:intergenic |
| ATGGCCATTGATAGTCTTCC+TGG | 0.358761 | 4.4:+88004583 | MS.gene37317:CDS |
| CTAGGTATTATATTCACATT+TGG | 0.359706 | 4.4:+88002219 | MS.gene37317:CDS |
| GCAAGCAGTGTTTGTGGAAA+TGG | 0.365305 | 4.4:+88003877 | MS.gene37317:CDS |
| ATTCCTGCCTTGATGGTAGC+AGG | 0.375523 | 4.4:+88002831 | MS.gene37317:CDS |
| TGCTCACCAAAGGCAATAAC+AGG | 0.379306 | 4.4:-87999789 | None:intergenic |
| AGAAGCTTTATTGCAGACTA+TGG | 0.379594 | 4.4:+88002438 | MS.gene37317:CDS |
| TTTCACTGGCTTTATGTGAA+TGG | 0.387832 | 4.4:+88002192 | MS.gene37317:CDS |
| CATATTCTTACTAGGATTTG+TGG | 0.394900 | 4.4:+88002941 | MS.gene37317:CDS |
| TTGATCATAGTGTTGCTTCT+GGG | 0.397693 | 4.4:+88002865 | MS.gene37317:CDS |
| AGAGGAGCAACTAGTCTTCT+TGG | 0.398425 | 4.4:-88002531 | None:intergenic |
| GTGGGGATACTTTGCATACA+TGG | 0.407230 | 4.4:+88004564 | MS.gene37317:CDS |
| CACAATGTTATAAAGATGAT+TGG | 0.423839 | 4.4:+87999581 | MS.gene37317:CDS |
| ACTTTGATTTGTGGACTACT+TGG | 0.426646 | 4.4:+88003083 | MS.gene37317:CDS |
| AATCTCCATCTTTGCACCAT+TGG | 0.428946 | 4.4:+88002562 | MS.gene37317:CDS |
| GGGTCATCATGCTTCCTTTG+TGG | 0.430230 | 4.4:+88004877 | MS.gene37317:CDS |
| CAAATGGATTCACCTAGCTT+TGG | 0.430914 | 4.4:+88005297 | MS.gene37317:CDS |
| CTGGCTTCTACAGCCATTTG+TGG | 0.431750 | 4.4:+88001327 | MS.gene37317:CDS |
| ATTTCAGACTTCTGTGGAAA+GGG | 0.431944 | 4.4:+88004339 | MS.gene37317:intron |
| ATATCGTCAACAGATTTACT+AGG | 0.432276 | 4.4:+88001947 | MS.gene37317:CDS |
| CATGCATCAATATGCTTCTC+AGG | 0.433291 | 4.4:-88004430 | None:intergenic |
| GACTAGTTGCTCCTCTAGCT+TGG | 0.433751 | 4.4:+88002538 | MS.gene37317:CDS |
| AGAGCAGAAGAGCAAGATCT+TGG | 0.434649 | 4.4:+88002262 | MS.gene37317:CDS |
| ACTTACTTGAACCACCTACT+AGG | 0.441604 | 4.4:-88004646 | None:intergenic |
| GAGCAAGATCTTGGTTATAT+GGG | 0.443047 | 4.4:+88002271 | MS.gene37317:CDS |
| ATCTTAAAAGGTGAAGATAA+AGG | 0.446293 | 4.4:+88004385 | MS.gene37317:CDS |
| TTCTCTTTGTGTCACCTAGT+AGG | 0.452706 | 4.4:+88004632 | MS.gene37317:CDS |
| GCAAAGAAAATATAGGTAGT+TGG | 0.454754 | 4.4:-87999756 | None:intergenic |
| CTCCTAGCAATATTTAATGT+TGG | 0.457606 | 4.4:+88001922 | MS.gene37317:CDS |
| ACATTTCAGACTTTGATTTG+TGG | 0.458488 | 4.4:+88003074 | MS.gene37317:intron |
| AGATCTTGGTTATATGGGAC+AGG | 0.463073 | 4.4:+88002276 | MS.gene37317:CDS |
| TCTTCCTGGTAATCAATTCT+GGG | 0.464011 | 4.4:+88004597 | MS.gene37317:CDS |
| TAGAGAGGAAAGACATGGTC+AGG | 0.466319 | 4.4:+88005401 | MS.gene37317:CDS |
| CTCCTACAATGAGGAGTGGT+TGG | 0.469360 | 4.4:-88001374 | None:intergenic |
| TATCCCCACAAAACTGAAGT+TGG | 0.470017 | 4.4:-88004550 | None:intergenic |
| TTTAGCAAAGTTGTACAAGT+AGG | 0.472082 | 4.4:-88001424 | None:intergenic |
| TGAATGTATGATTCCACAAA+TGG | 0.480302 | 4.4:-88001340 | None:intergenic |
| AGCAGAAGCAAAGAAAATAT+AGG | 0.482036 | 4.4:-87999763 | None:intergenic |
| TTCAGTCTTGTTCATTCAAG+AGG | 0.482368 | 4.4:+88001999 | MS.gene37317:CDS |
| ACTGTCCAATGGTGCAAAGA+TGG | 0.487827 | 4.4:-88002567 | None:intergenic |
| CTTTCCCAGAATTGATTACC+AGG | 0.490212 | 4.4:-88004601 | None:intergenic |
| CCTCTCAGTTCTCAAGGGTC+TGG | 0.490548 | 4.4:+88003157 | MS.gene37317:CDS |
| GGAATTATCAGTGATATAAG+AGG | 0.491020 | 4.4:+87999553 | MS.gene37317:CDS |
| CTTGGCTTACCTCCTTCAAA+TGG | 0.497540 | 4.4:+88003101 | MS.gene37317:CDS |
| TTCCTGCCTTGATGGTAGCA+GGG | 0.499828 | 4.4:+88002832 | MS.gene37317:CDS |
| GTGGTGAGGACTAAAGAACT+TGG | 0.503779 | 4.4:-88005050 | None:intergenic |
| CAGAACAATACCAATTTCAC+TGG | 0.503913 | 4.4:+88002178 | MS.gene37317:CDS |
| ACTAGTTGCTCCTCTAGCTT+GGG | 0.506471 | 4.4:+88002539 | MS.gene37317:CDS |
| GCTGAATATGAAGAAATTGC+TGG | 0.508359 | 4.4:+88005091 | MS.gene37317:CDS |
| TAAGAGCCTCTCAGTTCTCA+AGG | 0.513791 | 4.4:+88003151 | MS.gene37317:CDS |
| TGAGGAAGAACACCATTTGA+AGG | 0.516885 | 4.4:-88003113 | None:intergenic |
| AAAGATGCAAGCAGTGTTTG+TGG | 0.516975 | 4.4:+88003871 | MS.gene37317:CDS |
| GGCCAACCACTCCTCATTGT+AGG | 0.517222 | 4.4:+88001372 | MS.gene37317:CDS |
| GTGACATGGATTCCAATAGC+TGG | 0.521942 | 4.4:+88004971 | MS.gene37317:CDS |
| GATTAAATTTCAGACTTCTG+TGG | 0.522445 | 4.4:+88004333 | MS.gene37317:intron |
| AATTTCAGACTTCTGTGGAA+AGG | 0.526786 | 4.4:+88004338 | MS.gene37317:intron |
| ATTTCCATTGATCCAAAGCT+AGG | 0.528239 | 4.4:-88005309 | None:intergenic |
| CTGGTAATCAATTCTGGGAA+AGG | 0.528888 | 4.4:+88004602 | MS.gene37317:CDS |
| AGTCTTCTTGGAATTTCAGA+AGG | 0.536248 | 4.4:-88002519 | None:intergenic |
| GTAGATGATCAGAAGAAAGA+TGG | 0.537686 | 4.4:+88003793 | MS.gene37317:intron |
| TTCTGGGATGGCACAACAGA+AGG | 0.538374 | 4.4:+88002881 | MS.gene37317:CDS |
| ATTACCAGGAAGACTATCAA+TGG | 0.540612 | 4.4:-88004587 | None:intergenic |
| TTATGCTGCAGGACATGGGA+AGG | 0.542317 | 4.4:+88002778 | MS.gene37317:intron |
| TATTTATGCTTGAAATGGGG+TGG | 0.553496 | 4.4:+87999512 | None:intergenic |
| TCTTTGTGTCACCTAGTAGG+TGG | 0.553721 | 4.4:+88004635 | MS.gene37317:CDS |
| TGGTGAGGACTAAAGAACTT+GGG | 0.554627 | 4.4:-88005049 | None:intergenic |
| TGCCAACATTAAATATTGCT+AGG | 0.555211 | 4.4:-88001924 | None:intergenic |
| CATACACTCAAAGAGAGTCT+TGG | 0.555643 | 4.4:-88005118 | None:intergenic |
| AGCCCTGCTACCATCAAGGC+AGG | 0.556589 | 4.4:-88002834 | None:intergenic |
| AAACCAAGAAATAGACACAT+TGG | 0.559958 | 4.4:-88004940 | None:intergenic |
| CAGAACTTTAAGCTTTAGAG+AGG | 0.561772 | 4.4:+88005386 | MS.gene37317:CDS |
| TAGGTATACATGATGATGGT+GGG | 0.568391 | 4.4:-88001405 | None:intergenic |
| TCGATTCAGCTGCTCACCAA+AGG | 0.568516 | 4.4:-87999799 | None:intergenic |
| CAATTTATGCTGCAGGACAT+GGG | 0.573504 | 4.4:+88002774 | MS.gene37317:intron |
| GTAAAGCCCTGCTACCATCA+AGG | 0.579565 | 4.4:-88002838 | None:intergenic |
| ATCATACATTCAATTATTGG+AGG | 0.587308 | 4.4:+88001351 | MS.gene37317:CDS |
| GGAACTAGAGAACTTAAAAG+AGG | 0.588872 | 4.4:+88004360 | MS.gene37317:CDS |
| TCTAGTTCTTTAAGGTGGTG+AGG | 0.589908 | 4.4:-88005064 | None:intergenic |
| TATCGTCAACAGATTTACTA+GGG | 0.593342 | 4.4:+88001948 | MS.gene37317:CDS |
| TATGCTGCAGGACATGGGAA+GGG | 0.598343 | 4.4:+88002779 | MS.gene37317:intron |
| TCATAGTGTTGCTTCTGGGA+TGG | 0.600477 | 4.4:+88002869 | MS.gene37317:CDS |
| AAAGATGGTTGAAACTGCCA+AGG | 0.602722 | 4.4:+88003808 | MS.gene37317:CDS |
| TCTTCAATGTTGTATAGAGA+AGG | 0.603043 | 4.4:-88002242 | None:intergenic |
| CTGCATCTAGTTCTTTAAGG+TGG | 0.609386 | 4.4:-88005069 | None:intergenic |
| TTAGTATGCATAGGAGATTG+AGG | 0.610628 | 4.4:-88003131 | None:intergenic |
| GAGAGGCTCTTAGTATGCAT+AGG | 0.616506 | 4.4:-88003140 | None:intergenic |
| AAGAGCCTCTCAGTTCTCAA+GGG | 0.616777 | 4.4:+88003152 | MS.gene37317:CDS |
| CAAGTAGGTATACATGATGA+TGG | 0.617804 | 4.4:-88001409 | None:intergenic |
| AATTGGTACTGTTTCCACAA+AGG | 0.619899 | 4.4:-88004891 | None:intergenic |
| GATGAATTAACTACAAGCAG+AGG | 0.625445 | 4.4:+88005351 | MS.gene37317:CDS |
| GTAGGTATACATGATGATGG+TGG | 0.632071 | 4.4:-88001406 | None:intergenic |
| TTACTTTGATAACTGTCCAA+TGG | 0.633020 | 4.4:-88002578 | None:intergenic |
| ATGTCATAATGATATGCAGA+AGG | 0.635380 | 4.4:-88002921 | None:intergenic |
| AGCTTTAGAGAGGAAAGACA+TGG | 0.645374 | 4.4:+88005396 | MS.gene37317:CDS |
| GATGGAGATTCCCAAGCTAG+AGG | 0.645592 | 4.4:-88002549 | None:intergenic |
| ATTGAGCACAGTAGAAACAC+TGG | 0.647913 | 4.4:+88001308 | MS.gene37317:CDS |
| GGAAGAACACCATTTGAAGG+AGG | 0.648209 | 4.4:-88003110 | None:intergenic |
| GGTGAGGACTAAAGAACTTG+GGG | 0.660807 | 4.4:-88005048 | None:intergenic |
| AAACTTACCCAATACCAGAA+CGG | 0.665316 | 4.4:-87999615 | None:intergenic |
| GAGGACTAAAGAACTTGGGG+AGG | 0.669482 | 4.4:-88005045 | None:intergenic |
| GAGCAGCTGAATCGAGACAC+AGG | 0.681742 | 4.4:+87999807 | MS.gene37317:CDS |
| GCAACTCCTACAATGAGGAG+TGG | 0.695067 | 4.4:-88001378 | None:intergenic |
| GTTCTGCAACTCCTACAATG+AGG | 0.722737 | 4.4:-88001383 | None:intergenic |
| CCAGACCCTTGAGAACTGAG+AGG | 0.733266 | 4.4:-88003157 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCATAAAAAAAATTC+GGG | - | chr4.4:88000290-88000309 | None:intergenic | 10.0% |
| !! | CAAATTCTTTATTATTATAA+TGG | + | chr4.4:88001509-88001528 | MS.gene37317:intron | 10.0% |
| !! | GAAAAAAAAAAAAAAAAAAG+AGG | + | chr4.4:88005708-88005727 | MS.gene37317:intron | 10.0% |
| !! | GTATTAATGATTAAATTAAA+TGG | + | chr4.4:88003740-88003759 | MS.gene37317:intron | 10.0% |
| !! | TAATAATTAGAGAAAAAAAA+TGG | + | chr4.4:88004210-88004229 | MS.gene37317:intron | 10.0% |
| !! | TAGATGTATAATTATAATTA+AGG | + | chr4.4:88000747-88000766 | MS.gene37317:intron | 10.0% |
| !! | TTAAAAGTCAAAAAAAATTT+CGG | - | chr4.4:88000352-88000371 | None:intergenic | 10.0% |
| !!! | AAAACTTTGTTTAAATATTA+CGG | - | chr4.4:88003349-88003368 | None:intergenic | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | chr4.4:88000315-88000334 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTGTTTAAATAC+CGG | - | chr4.4:88003592-88003611 | None:intergenic | 10.0% |
| !!! | TTGAAAAAAAAAAATTTTGA+AGG | + | chr4.4:88000417-88000436 | MS.gene37317:intron | 10.0% |
| !!! | TTTTTAATAGTATTTACAAA+GGG | - | chr4.4:88002989-88003008 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTCTAATTATTAT+AGG | - | chr4.4:88004209-88004228 | None:intergenic | 10.0% |
| !! | AAAACAAAAAAAAATAAGTC+AGG | - | chr4.4:88000239-88000258 | None:intergenic | 15.0% |
| !! | AAACAAAAAAAAATAAGTCA+GGG | - | chr4.4:88000238-88000257 | None:intergenic | 15.0% |
| !! | AATTATAATTATACATCTAG+AGG | - | chr4.4:88000746-88000765 | None:intergenic | 15.0% |
| !! | TATAATTATAATTAAGGATG+AGG | + | chr4.4:88000753-88000772 | MS.gene37317:intron | 15.0% |
| !! | TTAAGCTTATAAAATAACTT+TGG | - | chr4.4:88000852-88000871 | None:intergenic | 15.0% |
| !!! | AAAACTGAGTTTTTTTTTTA+AGG | - | chr4.4:88000265-88000284 | None:intergenic | 15.0% |
| !!! | AAATATAATTTTGCTTGAAA+AGG | + | chr4.4:88002078-88002097 | MS.gene37317:intron | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr4.4:88000314-88000333 | None:intergenic | 15.0% |
| !!! | CTTTTTAATAGTATTTACAA+AGG | - | chr4.4:88002990-88003009 | None:intergenic | 15.0% |
| !!! | TATTTCTATATATTTTCTCA+GGG | + | chr4.4:88001870-88001889 | MS.gene37317:intron | 15.0% |
| !!! | TTATAGTTTTTATAAAGCAT+AGG | + | chr4.4:88003194-88003213 | MS.gene37317:intron | 15.0% |
| !!! | TTATTTCTATATATTTTCTC+AGG | + | chr4.4:88001869-88001888 | MS.gene37317:intron | 15.0% |
| !!! | TTTTTATTGATGATAAAACA+TGG | + | chr4.4:88005877-88005896 | MS.gene37317:intron | 15.0% |
| !! | AAAGTTTACTAAAATTATGC+AGG | + | chr4.4:88002110-88002129 | MS.gene37317:intron | 20.0% |
| !! | AACAAAAAAAAATAAGTCAG+GGG | - | chr4.4:88000237-88000256 | None:intergenic | 20.0% |
| !! | AAGTTTACTAAAATTATGCA+GGG | + | chr4.4:88002111-88002130 | MS.gene37317:intron | 20.0% |
| !! | AATATGACAAAGACTAAATT+TGG | + | chr4.4:88000640-88000659 | MS.gene37317:intron | 20.0% |
| !! | TAAATGATTAAACTTTGCAA+GGG | - | chr4.4:88000138-88000157 | None:intergenic | 20.0% |
| !! | TGAATCTCATTATTAATTAG+TGG | + | chr4.4:88003021-88003040 | MS.gene37317:intron | 20.0% |
| !! | TTAAAAGAGGTAATCTTAAA+AGG | + | chr4.4:88004373-88004392 | MS.gene37317:CDS | 20.0% |
| !! | TTAAATGATTAAACTTTGCA+AGG | - | chr4.4:88000139-88000158 | None:intergenic | 20.0% |
| !! | TTAAATGATTAAACTTTGCT+GGG | + | chr4.4:88000536-88000555 | MS.gene37317:intron | 20.0% |
| !! | TTATAGAAACAATTTATGAC+AGG | + | chr4.4:88005554-88005573 | MS.gene37317:intron | 20.0% |
| !! | TTTAAATGATTAAACTTTGC+TGG | + | chr4.4:88000535-88000554 | MS.gene37317:intron | 20.0% |
| !! | TTTGAAAAAAGATCTTAGTT+TGG | + | chr4.4:88003227-88003246 | MS.gene37317:intron | 20.0% |
| !! | TTTGCTGAAAAAAAAAGTAA+AGG | - | chr4.4:88005281-88005300 | None:intergenic | 20.0% |
| !!! | AACTTGCACTTTTTTTTTTT+GGG | + | chr4.4:87999692-87999711 | MS.gene37317:intron | 20.0% |
| !!! | AATTTAGTCTTTGTCATATT+AGG | - | chr4.4:88000640-88000659 | None:intergenic | 20.0% |
| !!! | TCTGAAATTTAATCATGTTT+GGG | - | chr4.4:88004327-88004346 | None:intergenic | 20.0% |
| !!! | TTACTTTTTTTTTCAGCAAA+TGG | + | chr4.4:88005281-88005300 | MS.gene37317:intron | 20.0% |
| !!! | TTCAATCTAAAGTTACTTAT+TGG | + | chr4.4:88004124-88004143 | MS.gene37317:intron | 20.0% |
| !!! | TTGTTTATTTTGTTCATAGA+TGG | + | chr4.4:88001282-88001301 | MS.gene37317:intron | 20.0% |
| !!! | TTTTCACATGTTATTTCATT+AGG | - | chr4.4:88005625-88005644 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTAGAGATAGAAA+CGG | - | chr4.4:88005696-88005715 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGCGTAAACT+AGG | + | chr4.4:87999857-87999876 | MS.gene37317:intron | 20.0% |
| ! | AAAGCAGCAAAAATATATGT+TGG | - | chr4.4:88002810-88002829 | None:intergenic | 25.0% |
| ! | AAATAAAACGGTCTACATAT+AGG | - | chr4.4:88001768-88001787 | None:intergenic | 25.0% |
| ! | AACTTTGCTAAAAATAAGGA+TGG | + | chr4.4:88001435-88001454 | MS.gene37317:CDS | 25.0% |
| ! | AAGAAGACTATGTATCTAAT+TGG | - | chr4.4:88004911-88004930 | None:intergenic | 25.0% |
| ! | AATATAACCAAGATCAACTA+TGG | - | chr4.4:88002370-88002389 | None:intergenic | 25.0% |
| ! | AATTATAATTAAGGATGAGG+TGG | + | chr4.4:88000756-88000775 | MS.gene37317:intron | 25.0% |
| ! | ACGTCATCAAATTAACAAAA+TGG | + | chr4.4:88000191-88000210 | MS.gene37317:intron | 25.0% |
| ! | ACGTCATCAAATTAACAAAA+TGG | - | chr4.4:88000210-88000191 | None:intergenic | 25.0% |
| ! | ACTAAACCATTATAACAGTT+CGG | - | chr4.4:88004742-88004761 | None:intergenic | 25.0% |
| ! | ACTATTATAAGACTTACAAC+TGG | - | chr4.4:88003911-88003930 | None:intergenic | 25.0% |
| ! | AGCAATTCAATTGTAATCTT+TGG | - | chr4.4:88005437-88005456 | None:intergenic | 25.0% |
| ! | ATAATTTATTCATTGCATGC+AGG | + | chr4.4:88005585-88005604 | MS.gene37317:intron | 25.0% |
| ! | ATCAAATTAACAAAATGGCA+TGG | - | chr4.4:88000215-88000196 | None:intergenic | 25.0% |
| ! | ATCATACATTCAATTATTGG+AGG | + | chr4.4:88001351-88001370 | MS.gene37317:CDS | 25.0% |
| ! | ATCTTAAAAGGTGAAGATAA+AGG | + | chr4.4:88004385-88004404 | MS.gene37317:CDS | 25.0% |
| ! | ATGGAGAAATTAGATAAAAG+AGG | + | chr4.4:88002640-88002659 | MS.gene37317:intron | 25.0% |
| ! | CAAATAGTGAAGTTATGTAT+CGG | + | chr4.4:88003977-88003996 | MS.gene37317:intron | 25.0% |
| ! | CACAATGTTATAAAGATGAT+TGG | + | chr4.4:87999581-87999600 | MS.gene37317:CDS | 25.0% |
| ! | CATTATGACATATTCTTACT+AGG | + | chr4.4:88002933-88002952 | MS.gene37317:CDS | 25.0% |
| ! | CTAGGTATTATATTCACATT+TGG | + | chr4.4:88002219-88002238 | MS.gene37317:CDS | 25.0% |
| ! | CTATTATAAGACTTACAACT+GGG | - | chr4.4:88003910-88003929 | None:intergenic | 25.0% |
| ! | CTGAATTACCAATAATATGA+CGG | + | chr4.4:88000035-88000054 | MS.gene37317:intron | 25.0% |
| ! | CTTTGTTAATGATAGGATAT+TGG | + | chr4.4:87999731-87999750 | MS.gene37317:intron | 25.0% |
| ! | GGAATCATACATTCAATTAT+TGG | + | chr4.4:88001348-88001367 | MS.gene37317:CDS | 25.0% |
| ! | GTACAACTTTGCTAAAAATA+AGG | + | chr4.4:88001431-88001450 | MS.gene37317:CDS | 25.0% |
| ! | TAAATGATTAAACTTTGCTG+GGG | + | chr4.4:88000537-88000556 | MS.gene37317:intron | 25.0% |
| ! | TAAGTTAGATAATCCAAACA+AGG | - | chr4.4:88002621-88002640 | None:intergenic | 25.0% |
| ! | TAATTTATTCATTGCATGCA+GGG | + | chr4.4:88005586-88005605 | MS.gene37317:intron | 25.0% |
| ! | TACGTAATACGATATTATAG+TGG | + | chr4.4:88003269-88003288 | MS.gene37317:intron | 25.0% |
| ! | TCAAATTAACAAAATGGCAT+GGG | - | chr4.4:88000216-88000197 | None:intergenic | 25.0% |
| ! | TGTAGATATCGGTAATAATA+TGG | + | chr4.4:88005241-88005260 | MS.gene37317:intron | 25.0% |
| ! | TGTTTGGATTATCTAACTTA+TGG | + | chr4.4:88002621-88002640 | MS.gene37317:intron | 25.0% |
| ! | TTAAGTGCTTATAACATAAG+AGG | + | chr4.4:88001821-88001840 | MS.gene37317:intron | 25.0% |
| ! | TTAGAATTGAGATCAAATAG+TGG | - | chr4.4:88005163-88005182 | None:intergenic | 25.0% |
| ! | TTATAGAAAAGATGCAAGTT+TGG | + | chr4.4:88003457-88003476 | MS.gene37317:intron | 25.0% |
| !! | AATAGGGGCAATTTAAAATT+TGG | - | chr4.4:88000592-88000611 | None:intergenic | 25.0% |
| !! | GTCTGAAATTTAATCATGTT+TGG | - | chr4.4:88004328-88004347 | None:intergenic | 25.0% |
| !! | GTTAACATGATTTTAAATCG+CGG | - | chr4.4:88004823-88004842 | None:intergenic | 25.0% |
| !! | TAAATGGGATACTTTTGATA+AGG | + | chr4.4:88003756-88003775 | MS.gene37317:intron | 25.0% |
| !! | TACATGGACCAAATTTTAAA+TGG | - | chr4.4:88000094-88000113 | None:intergenic | 25.0% |
| !! | TCTGCAAAAAGTATAACTTA+GGG | - | chr4.4:88002735-88002754 | None:intergenic | 25.0% |
| !! | TGGTTAAAATCACCTTTTAA+GGG | + | chr4.4:87999532-87999551 | MS.gene37317:CDS | 25.0% |
| !! | TTCTGCAAAAAGTATAACTT+AGG | - | chr4.4:88002736-88002755 | None:intergenic | 25.0% |
| !!! | AAAAACCTAATGCTTTGTTT+TGG | + | chr4.4:88003046-88003065 | MS.gene37317:intron | 25.0% |
| !!! | ATTTCAGAAGGTATTTTTCT+TGG | - | chr4.4:88002510-88002529 | None:intergenic | 25.0% |
| !!! | ATTTTGTTAATTTGATGACG+TGG | + | chr4.4:88000483-88000502 | MS.gene37317:intron | 25.0% |
| !!! | ATTTTGTTAATTTGATGACG+TGG | - | chr4.4:88000502-88000483 | None:intergenic | 25.0% |
| !!! | CATGTTATTTCATTAGGATT+AGG | - | chr4.4:88005619-88005638 | None:intergenic | 25.0% |
| !!! | GAACTTGCACTTTTTTTTTT+TGG | + | chr4.4:87999691-87999710 | MS.gene37317:intron | 25.0% |
| !!! | GAAGTTGAGTTTTCATTTTT+AGG | - | chr4.4:88002159-88002178 | None:intergenic | 25.0% |
| !!! | TATGACATGGTCTTATTTAT+TGG | + | chr4.4:88002403-88002422 | MS.gene37317:intron | 25.0% |
| !!! | TTATACTTTTTGCAGAACAT+GGG | + | chr4.4:88002739-88002758 | MS.gene37317:intron | 25.0% |
| AAACCAAGAAATAGACACAT+TGG | - | chr4.4:88004943-88004962 | None:intergenic | 30.0% | |
| AAGGAAAAAAAAATTAGCCC+AGG | + | chr4.4:88000436-88000455 | MS.gene37317:intron | 30.0% | |
| ACCAAGATCAGTAAAAAGAA+TGG | - | chr4.4:88005013-88005032 | None:intergenic | 30.0% | |
| ACTTGCACTTTGTTAATGAT+AGG | + | chr4.4:87999724-87999743 | MS.gene37317:intron | 30.0% | |
| AGCAGAAGCAAAGAAAATAT+AGG | - | chr4.4:87999766-87999785 | None:intergenic | 30.0% | |
| AGGAAAAAAAAATTAGCCCA+GGG | + | chr4.4:88000437-88000456 | MS.gene37317:intron | 30.0% | |
| AGTGTATCTAGTGTCTAATA+CGG | - | chr4.4:88004104-88004123 | None:intergenic | 30.0% | |
| ATATCATTTCCTCGTCAATT+TGG | + | chr4.4:88004685-88004704 | MS.gene37317:intron | 30.0% | |
| ATATCGTCAACAGATTTACT+AGG | + | chr4.4:88001947-88001966 | MS.gene37317:CDS | 30.0% | |
| ATCAGTAAAAAGAATGGCAA+GGG | - | chr4.4:88005007-88005026 | None:intergenic | 30.0% | |
| ATGTCATAATGATATGCAGA+AGG | - | chr4.4:88002924-88002943 | None:intergenic | 30.0% | |
| CAACAATAGATCACATAGTT+CGG | - | chr4.4:88003697-88003716 | None:intergenic | 30.0% | |
| CATATTCTTACTAGGATTTG+TGG | + | chr4.4:88002941-88002960 | MS.gene37317:CDS | 30.0% | |
| CTAACACTTTAGATTGAAGA+CGG | - | chr4.4:88004285-88004304 | None:intergenic | 30.0% | |
| CTAAGAACTTGGAGAAAATA+TGG | + | chr4.4:88005660-88005679 | MS.gene37317:intron | 30.0% | |
| CTCCTAGCAATATTTAATGT+TGG | + | chr4.4:88001922-88001941 | MS.gene37317:CDS | 30.0% | |
| CTCCTTCCTTCAAAAAAAAA+TGG | - | chr4.4:88001712-88001731 | None:intergenic | 30.0% | |
| CTTTATGTGAATGGTTTACT+AGG | + | chr4.4:88002201-88002220 | MS.gene37317:CDS | 30.0% | |
| CTTTGTCATATTAGGCTTAA+TGG | - | chr4.4:88000632-88000651 | None:intergenic | 30.0% | |
| GATTAAATTTCAGACTTCTG+TGG | + | chr4.4:88004333-88004352 | MS.gene37317:intron | 30.0% | |
| GCAAAGAAAATATAGGTAGT+TGG | - | chr4.4:87999759-87999778 | None:intergenic | 30.0% | |
| GGAATTATCAGTGATATAAG+AGG | + | chr4.4:87999553-87999572 | MS.gene37317:CDS | 30.0% | |
| GTTGATCTTGGTTATATTTG+AGG | + | chr4.4:88002372-88002391 | MS.gene37317:intron | 30.0% | |
| TATCGTCAACAGATTTACTA+GGG | + | chr4.4:88001948-88001967 | MS.gene37317:CDS | 30.0% | |
| TCACTGATAATTCCCTTAAA+AGG | - | chr4.4:87999547-87999566 | None:intergenic | 30.0% | |
| TCTTCAATGTTGTATAGAGA+AGG | - | chr4.4:88002245-88002264 | None:intergenic | 30.0% | |
| TGAATGTATGATTCCACAAA+TGG | - | chr4.4:88001343-88001362 | None:intergenic | 30.0% | |
| TGAGATCAAATAGTGGTATA+GGG | - | chr4.4:88005156-88005175 | None:intergenic | 30.0% | |
| TGAGGAATAGTTATATGACA+TGG | + | chr4.4:88002390-88002409 | MS.gene37317:intron | 30.0% | |
| TGCCAACATTAAATATTGCT+AGG | - | chr4.4:88001927-88001946 | None:intergenic | 30.0% | |
| TTGAGATCAAATAGTGGTAT+AGG | - | chr4.4:88005157-88005176 | None:intergenic | 30.0% | |
| TTTAGCAAAGTTGTACAAGT+AGG | - | chr4.4:88001427-88001446 | None:intergenic | 30.0% | |
| ! | AAATTCCAACTTCAGTTTTG+TGG | + | chr4.4:88004545-88004564 | MS.gene37317:CDS | 30.0% |
| ! | AGCGTCTATTTTCACTATTT+GGG | - | chr4.4:88003316-88003335 | None:intergenic | 30.0% |
| ! | ATTAGGGGCCATTTAAAATT+TGG | + | chr4.4:88000083-88000102 | MS.gene37317:intron | 30.0% |
| ! | CTTATGAAGAGTTTGTTTGA+GGG | - | chr4.4:87999913-87999932 | None:intergenic | 30.0% |
| ! | CTTTTACAATCACTCTTTGT+TGG | + | chr4.4:88004490-88004509 | MS.gene37317:CDS | 30.0% |
| ! | GTGGTTAAAATCACCTTTTA+AGG | + | chr4.4:87999531-87999550 | MS.gene37317:CDS | 30.0% |
| ! | GTTGGAATTTTCTTAATGAC+AGG | - | chr4.4:88004535-88004554 | None:intergenic | 30.0% |
| ! | TCTTATGAAGAGTTTGTTTG+AGG | - | chr4.4:87999914-87999933 | None:intergenic | 30.0% |
| ! | TTACTTTGATAACTGTCCAA+TGG | - | chr4.4:88002581-88002600 | None:intergenic | 30.0% |
| ! | TTTCCAATGTGTCTATTTCT+TGG | + | chr4.4:88004937-88004956 | MS.gene37317:CDS | 30.0% |
| ! | TTTGTAAAGCATTAGAGAGA+AGG | + | chr4.4:88003434-88003453 | MS.gene37317:intron | 30.0% |
| !! | AATTCCAACTTCAGTTTTGT+GGG | + | chr4.4:88004546-88004565 | MS.gene37317:CDS | 30.0% |
| !! | ACATTTCAGACTTTGATTTG+TGG | + | chr4.4:88003074-88003093 | MS.gene37317:intron | 30.0% |
| !! | CATGGTCTTATTTATTGGAT+AGG | + | chr4.4:88002408-88002427 | MS.gene37317:intron | 30.0% |
| !! | GTCTTATTTATTGGATAGGT+TGG | + | chr4.4:88002412-88002431 | MS.gene37317:intron | 30.0% |
| !! | GTTATACTTTTTGCAGAACA+TGG | + | chr4.4:88002738-88002757 | MS.gene37317:intron | 30.0% |
| !! | TATAAGCATTGCATTTTGCA+CGG | + | chr4.4:88003381-88003400 | MS.gene37317:intron | 30.0% |
| !! | TATTTTTGCAGGTTATTGGA+GGG | + | chr4.4:88004857-88004876 | MS.gene37317:intron | 30.0% |
| !! | TGTTAAACTAAAGCCTTGTT+TGG | + | chr4.4:88002605-88002624 | MS.gene37317:intron | 30.0% |
| !! | TGTTAGAATTTAGCTTGATG+TGG | - | chr4.4:88000798-88000817 | None:intergenic | 30.0% |
| !! | TTTTGCCAAAACAAAGCATT+AGG | - | chr4.4:88003054-88003073 | None:intergenic | 30.0% |
| !!! | AACCTATTTTTGCAGGTTAT+TGG | + | chr4.4:88004853-88004872 | MS.gene37317:intron | 30.0% |
| !!! | GACCATTTTTTTTTGAAGGA+AGG | + | chr4.4:88001707-88001726 | MS.gene37317:intron | 30.0% |
| !!! | GCAAGACCATTTTTTTTTGA+AGG | + | chr4.4:88001703-88001722 | MS.gene37317:intron | 30.0% |
| !!! | GTCTATTTCTTGGTTTGTTT+TGG | + | chr4.4:88004947-88004966 | MS.gene37317:CDS | 30.0% |
| AAACCATTATAACAGTTCGG+TGG | - | chr4.4:88004739-88004758 | None:intergenic | 35.0% | |
| AAACTTACCCAATACCAGAA+CGG | - | chr4.4:87999618-87999637 | None:intergenic | 35.0% | |
| AATTGGTACTGTTTCCACAA+AGG | - | chr4.4:88004894-88004913 | None:intergenic | 35.0% | |
| AATTTCAGACTTCTGTGGAA+AGG | + | chr4.4:88004338-88004357 | MS.gene37317:intron | 35.0% | |
| ACAACCTAATGCAACTATGA+TGG | - | chr4.4:88003489-88003508 | None:intergenic | 35.0% | |
| AGAGCAAGATCTTGGTTATA+TGG | + | chr4.4:88002270-88002289 | MS.gene37317:CDS | 35.0% | |
| AGTACATGCACTATGATGTT+TGG | - | chr4.4:88005854-88005873 | None:intergenic | 35.0% | |
| AGTCTTCTTGGAATTTCAGA+AGG | - | chr4.4:88002522-88002541 | None:intergenic | 35.0% | |
| AGTTACAACTGTTCATGGTT+CGG | - | chr4.4:88004790-88004809 | None:intergenic | 35.0% | |
| ATGAAAAAGACACATGTGCA+TGG | + | chr4.4:88001679-88001698 | MS.gene37317:intron | 35.0% | |
| ATTACCAGGAAGACTATCAA+TGG | - | chr4.4:88004590-88004609 | None:intergenic | 35.0% | |
| ATTCTCTGATAAGTGGATAC+CGG | + | chr4.4:88003570-88003589 | MS.gene37317:intron | 35.0% | |
| ATTTCAGACTTCTGTGGAAA+GGG | + | chr4.4:88004339-88004358 | MS.gene37317:intron | 35.0% | |
| ATTTCCATTGATCCAAAGCT+AGG | - | chr4.4:88005312-88005331 | None:intergenic | 35.0% | |
| CAAGTAGGTATACATGATGA+TGG | - | chr4.4:88001412-88001431 | None:intergenic | 35.0% | |
| CAGAACAATACCAATTTCAC+TGG | + | chr4.4:88002178-88002197 | MS.gene37317:CDS | 35.0% | |
| CCAATAATATGACGGCTTAA+TGG | + | chr4.4:88000043-88000062 | MS.gene37317:intron | 35.0% | |
| CCATTAAGCCGTCATATTAT+TGG | - | chr4.4:88000046-88000065 | None:intergenic | 35.0% | |
| CTCCAATAACCTGCAAAAAT+AGG | - | chr4.4:88004858-88004877 | None:intergenic | 35.0% | |
| CTTGGAGAAAATATGGTAAG+TGG | + | chr4.4:88005667-88005686 | MS.gene37317:intron | 35.0% | |
| CTTTGCTCATTTACTCTAAC+AGG | - | chr4.4:88004460-88004479 | None:intergenic | 35.0% | |
| GAGCAAGATCTTGGTTATAT+GGG | + | chr4.4:88002271-88002290 | MS.gene37317:CDS | 35.0% | |
| GATCAGTAAAAAGAATGGCA+AGG | - | chr4.4:88005008-88005027 | None:intergenic | 35.0% | |
| GATGAATTAACTACAAGCAG+AGG | + | chr4.4:88005351-88005370 | MS.gene37317:CDS | 35.0% | |
| GCTAAAAATAAGGATGGCTT+GGG | + | chr4.4:88001441-88001460 | MS.gene37317:CDS | 35.0% | |
| GCTGAATATGAAGAAATTGC+TGG | + | chr4.4:88005091-88005110 | MS.gene37317:CDS | 35.0% | |
| GGAAAAAAAAATTAGCCCAG+GGG | + | chr4.4:88000438-88000457 | MS.gene37317:intron | 35.0% | |
| GGAACTAGAGAACTTAAAAG+AGG | + | chr4.4:88004360-88004379 | MS.gene37317:CDS | 35.0% | |
| GTAAATGCCATAGTTGATCT+TGG | + | chr4.4:88002360-88002379 | MS.gene37317:intron | 35.0% | |
| GTAGATGATCAGAAGAAAGA+TGG | + | chr4.4:88003793-88003812 | MS.gene37317:intron | 35.0% | |
| GTTCATTCAAGAGGCTATTA+AGG | + | chr4.4:88002008-88002027 | MS.gene37317:CDS | 35.0% | |
| TATTATAGGTAACGTGACCA+TGG | - | chr4.4:88004195-88004214 | None:intergenic | 35.0% | |
| TCACATAAAGCCAGTGAAAT+TGG | - | chr4.4:88002191-88002210 | None:intergenic | 35.0% | |
| TCACCAAATAGCTAAGAACT+TGG | + | chr4.4:88005649-88005668 | MS.gene37317:intron | 35.0% | |
| TCTCCAAGTTCTTAGCTATT+TGG | - | chr4.4:88005655-88005674 | None:intergenic | 35.0% | |
| TCTTCCTGGTAATCAATTCT+GGG | + | chr4.4:88004597-88004616 | MS.gene37317:CDS | 35.0% | |
| TGCTAAAAATAAGGATGGCT+TGG | + | chr4.4:88001440-88001459 | MS.gene37317:CDS | 35.0% | |
| TTAAATTGCCCCTATTTGCA+GGG | + | chr4.4:88000596-88000615 | MS.gene37317:intron | 35.0% | |
| TTAGTATGCATAGGAGATTG+AGG | - | chr4.4:88003134-88003153 | None:intergenic | 35.0% | |
| TTGAGTTCAATTTATGCTGC+AGG | + | chr4.4:88002767-88002786 | MS.gene37317:intron | 35.0% | |
| TTTAAATTGCCCCTATTTGC+AGG | + | chr4.4:88000595-88000614 | MS.gene37317:intron | 35.0% | |
| ! | ACTATTTGGGATCAGTTACA+TGG | - | chr4.4:88003303-88003322 | None:intergenic | 35.0% |
| ! | ATGATTTTAAATCGCGGTTG+TGG | - | chr4.4:88004817-88004836 | None:intergenic | 35.0% |
| ! | ATTTTCTCAGGGTTTGTGTA+TGG | + | chr4.4:88001881-88001900 | MS.gene37317:intron | 35.0% |
| ! | CAGCGTCTATTTTCACTATT+TGG | - | chr4.4:88003317-88003336 | None:intergenic | 35.0% |
| ! | GAGATTCTGAAAATTCGAGA+TGG | + | chr4.4:88000886-88000905 | MS.gene37317:intron | 35.0% |
| ! | GATGTTTGACCACCAATTTT+TGG | + | chr4.4:88000685-88000704 | MS.gene37317:intron | 35.0% |
| ! | GCCATTCTTTTTACTGATCT+TGG | + | chr4.4:88005009-88005028 | MS.gene37317:CDS | 35.0% |
| ! | TCTTTTTACTGATCTTGGTG+AGG | + | chr4.4:88005014-88005033 | MS.gene37317:CDS | 35.0% |
| !! | AATACACGAGGTTTGTTACA+TGG | - | chr4.4:88003553-88003572 | None:intergenic | 35.0% |
| !! | ACTTTGATTTGTGGACTACT+TGG | + | chr4.4:88003083-88003102 | MS.gene37317:CDS | 35.0% |
| !! | AGAAGCTTTATTGCAGACTA+TGG | + | chr4.4:88002438-88002457 | MS.gene37317:CDS | 35.0% |
| !! | ATTCCAACTTCAGTTTTGTG+GGG | + | chr4.4:88004547-88004566 | MS.gene37317:CDS | 35.0% |
| !! | CAGAACTTTAAGCTTTAGAG+AGG | + | chr4.4:88005386-88005405 | MS.gene37317:CDS | 35.0% |
| !! | TAGGTATACATGATGATGGT+GGG | - | chr4.4:88001408-88001427 | None:intergenic | 35.0% |
| !! | TTCAGTCTTGTTCATTCAAG+AGG | + | chr4.4:88001999-88002018 | MS.gene37317:CDS | 35.0% |
| !! | TTGATCATAGTGTTGCTTCT+GGG | + | chr4.4:88002865-88002884 | MS.gene37317:CDS | 35.0% |
| !! | TTTCACTGGCTTTATGTGAA+TGG | + | chr4.4:88002192-88002211 | MS.gene37317:CDS | 35.0% |
| !! | TTTGATCATAGTGTTGCTTC+TGG | + | chr4.4:88002864-88002883 | MS.gene37317:CDS | 35.0% |
| !!! | AAGACTTTTTCACTTGTGCA+CGG | - | chr4.4:88001600-88001619 | None:intergenic | 35.0% |
| !!! | ACAAGAACTCTTTTTGGCTT+GGG | + | chr4.4:88001464-88001483 | MS.gene37317:CDS | 35.0% |
| !!! | CTATTTTTGCAGGTTATTGG+AGG | + | chr4.4:88004856-88004875 | MS.gene37317:intron | 35.0% |
| !!! | TCAAGTCAACCTATTTTTGC+AGG | + | chr4.4:88004846-88004865 | MS.gene37317:intron | 35.0% |
| AAAGAGGGAGATATCAACCA+AGG | + | chr4.4:88005724-88005743 | MS.gene37317:intron | 40.0% | |
| AAAGATGCAAGCAGTGTTTG+TGG | + | chr4.4:88003871-88003890 | MS.gene37317:CDS | 40.0% | |
| AATCTCCATCTTTGCACCAT+TGG | + | chr4.4:88002562-88002581 | MS.gene37317:CDS | 40.0% | |
| ACGTCACATAAGTCACGTAA+TGG | - | chr4.4:88001647-88001666 | None:intergenic | 40.0% | |
| ACTTACTTGAACCACCTACT+AGG | - | chr4.4:88004649-88004668 | None:intergenic | 40.0% | |
| AGATCTTGGTTATATGGGAC+AGG | + | chr4.4:88002276-88002295 | MS.gene37317:CDS | 40.0% | |
| ATATGCGGTGGTCCAAAAAT+TGG | - | chr4.4:88000700-88000719 | None:intergenic | 40.0% | |
| ATTGAGCACAGTAGAAACAC+TGG | + | chr4.4:88001308-88001327 | MS.gene37317:CDS | 40.0% | |
| CAATTTATGCTGCAGGACAT+GGG | + | chr4.4:88002774-88002793 | MS.gene37317:intron | 40.0% | |
| CACTTATCAGAGAATACACG+AGG | - | chr4.4:88003565-88003584 | None:intergenic | 40.0% | |
| CAGACACAACACTACACTAT+CGG | + | chr4.4:88004023-88004042 | MS.gene37317:intron | 40.0% | |
| CATACACTCAAAGAGAGTCT+TGG | - | chr4.4:88005121-88005140 | None:intergenic | 40.0% | |
| CATCTAGAGGTGAAGTGTAT+TGG | - | chr4.4:88000733-88000752 | None:intergenic | 40.0% | |
| CATGCATCAATATGCTTCTC+AGG | - | chr4.4:88004433-88004452 | None:intergenic | 40.0% | |
| CGACACTGACATGTAGATAT+CGG | + | chr4.4:88005230-88005249 | MS.gene37317:intron | 40.0% | |
| CTCGTGTATTCTCTGATAAG+TGG | + | chr4.4:88003563-88003582 | MS.gene37317:intron | 40.0% | |
| CTGAAAATTCGAGATGGAGA+AGG | + | chr4.4:88000892-88000911 | MS.gene37317:intron | 40.0% | |
| CTTTCCCAGAATTGATTACC+AGG | - | chr4.4:88004604-88004623 | None:intergenic | 40.0% | |
| GAACTGAACCTGACTGTTAA+TGG | - | chr4.4:88004717-88004736 | None:intergenic | 40.0% | |
| GAATTGACCAAAATACCCCT+GGG | - | chr4.4:88000456-88000475 | None:intergenic | 40.0% | |
| GAGTCCATCATAGTTGCATT+AGG | + | chr4.4:88003482-88003501 | MS.gene37317:intron | 40.0% | |
| GGAAACAAGATTCCAGCTAT+TGG | - | chr4.4:88004986-88005005 | None:intergenic | 40.0% | |
| GGAATGAACCATTAACAGTC+AGG | + | chr4.4:88004706-88004725 | MS.gene37317:intron | 40.0% | |
| GTCCATACTACCACCAAAAA+AGG | - | chr4.4:88002468-88002487 | None:intergenic | 40.0% | |
| GTCTTCCTGGTAATCAATTC+TGG | + | chr4.4:88004596-88004615 | MS.gene37317:CDS | 40.0% | |
| GTCTTTCATCCCTGCAATTA+GGG | + | chr4.4:88000067-88000086 | MS.gene37317:intron | 40.0% | |
| GTTCCACCGAACTGTTATAA+TGG | + | chr4.4:88004733-88004752 | MS.gene37317:intron | 40.0% | |
| GTTGCAGTTACAACTGTTCA+TGG | - | chr4.4:88004795-88004814 | None:intergenic | 40.0% | |
| TAAATTGCCCCTATTTGCAG+GGG | + | chr4.4:88000597-88000616 | MS.gene37317:intron | 40.0% | |
| TATCCCCACAAAACTGAAGT+TGG | - | chr4.4:88004553-88004572 | None:intergenic | 40.0% | |
| TCAATTTATGCTGCAGGACA+TGG | + | chr4.4:88002773-88002792 | MS.gene37317:intron | 40.0% | |
| TCTTTCATCCCTGCAATTAG+GGG | + | chr4.4:88000068-88000087 | MS.gene37317:intron | 40.0% | |
| TGAGGAAGAACACCATTTGA+AGG | - | chr4.4:88003116-88003135 | None:intergenic | 40.0% | |
| TGGTGAGGACTAAAGAACTT+GGG | - | chr4.4:88005052-88005071 | None:intergenic | 40.0% | |
| TGGTTCATTCCAAATTGACG+AGG | - | chr4.4:88004697-88004716 | None:intergenic | 40.0% | |
| TGTCAACGTCTCTTTCAGAT+CGG | - | chr4.4:88003667-88003686 | None:intergenic | 40.0% | |
| TGTCTAATACGGACATGACA+CGG | - | chr4.4:88004093-88004112 | None:intergenic | 40.0% | |
| TGTCTTTCATCCCTGCAATT+AGG | + | chr4.4:88000066-88000085 | MS.gene37317:intron | 40.0% | |
| TTAAATGGCCCCTAATTGCA+GGG | - | chr4.4:88000079-88000098 | None:intergenic | 40.0% | |
| TTCTCTTTGTGTCACCTAGT+AGG | + | chr4.4:88004632-88004651 | MS.gene37317:CDS | 40.0% | |
| TTTAAATGGCCCCTAATTGC+AGG | - | chr4.4:88000080-88000099 | None:intergenic | 40.0% | |
| ! | AACCAAGGTCAAGTTTTGCA+TGG | + | chr4.4:88005739-88005758 | MS.gene37317:intron | 40.0% |
| ! | AGGGTTGCTGAAGAACTTTT+TGG | + | chr4.4:88001967-88001986 | MS.gene37317:CDS | 40.0% |
| ! | CAAATGGATTCACCTAGCTT+TGG | + | chr4.4:88005297-88005316 | MS.gene37317:CDS | 40.0% |
| ! | CTGGTAATCAATTCTGGGAA+AGG | + | chr4.4:88004602-88004621 | MS.gene37317:CDS | 40.0% |
| ! | CTTGGGACAAGAACTCTTTT+TGG | + | chr4.4:88001458-88001477 | MS.gene37317:CDS | 40.0% |
| ! | TAGAGGTGAAGTGTATTGGT+GGG | - | chr4.4:88000729-88000748 | None:intergenic | 40.0% |
| ! | TGCTTTTATTCCTGCCTTGA+TGG | + | chr4.4:88002824-88002843 | MS.gene37317:CDS | 40.0% |
| !! | AGCTTTAGAGAGGAAAGACA+TGG | + | chr4.4:88005396-88005415 | MS.gene37317:CDS | 40.0% |
| !! | CAGCTGCATCTAGTTCTTTA+AGG | - | chr4.4:88005075-88005094 | None:intergenic | 40.0% |
| !! | CTGCATCTAGTTCTTTAAGG+TGG | - | chr4.4:88005072-88005091 | None:intergenic | 40.0% |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | + | chr4.4:88000505-88000524 | MS.gene37317:intron | 40.0% |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | - | chr4.4:88000524-88000505 | None:intergenic | 40.0% |
| !! | GCTAGCAACTCTGAAATCTA+TGG | + | chr4.4:88003848-88003867 | MS.gene37317:CDS | 40.0% |
| !! | GTAGGTATACATGATGATGG+TGG | - | chr4.4:88001409-88001428 | None:intergenic | 40.0% |
| !! | TCTAGTTCTTTAAGGTGGTG+AGG | - | chr4.4:88005067-88005086 | None:intergenic | 40.0% |
| !! | TTCACCTAGCTTTGGATCAA+TGG | + | chr4.4:88005305-88005324 | MS.gene37317:CDS | 40.0% |
| !!! | AAATTAGCCCAGGGGTATTT+TGG | + | chr4.4:88000446-88000465 | MS.gene37317:intron | 40.0% |
| !!! | AGACTATGGTGTGCCTTTTT+TGG | + | chr4.4:88002452-88002471 | MS.gene37317:CDS | 40.0% |
| !!! | GACAAGAACTCTTTTTGGCT+TGG | + | chr4.4:88001463-88001482 | MS.gene37317:CDS | 40.0% |
| !!! | TGCCTTTTTTGGTGGTAGTA+TGG | + | chr4.4:88002463-88002482 | MS.gene37317:CDS | 40.0% |
| !!! | TGGTTTGTTTTGGAGTGACA+TGG | + | chr4.4:88004957-88004976 | MS.gene37317:CDS | 40.0% |
| AAGAGCCTCTCAGTTCTCAA+GGG | + | chr4.4:88003152-88003171 | MS.gene37317:CDS | 45.0% | |
| ACTGTCCAATGGTGCAAAGA+TGG | - | chr4.4:88002570-88002589 | None:intergenic | 45.0% | |
| AGAGCAGAAGAGCAAGATCT+TGG | + | chr4.4:88002262-88002281 | MS.gene37317:CDS | 45.0% | |
| ATGCAGCAGCAGAAGCAAAA+AGG | - | chr4.4:87999981-88000000 | None:intergenic | 45.0% | |
| CACCATGCAAAACTTGACCT+TGG | - | chr4.4:88005744-88005763 | None:intergenic | 45.0% | |
| CTAGAGGTGAAGTGTATTGG+TGG | - | chr4.4:88000730-88000749 | None:intergenic | 45.0% | |
| CTTGGCTTACCTCCTTCAAA+TGG | + | chr4.4:88003101-88003120 | MS.gene37317:CDS | 45.0% | |
| GAAAGACATGGTCAGGTAAG+TGG | + | chr4.4:88005408-88005427 | MS.gene37317:intron | 45.0% | |
| GAGAGGCTCTTAGTATGCAT+AGG | - | chr4.4:88003143-88003162 | None:intergenic | 45.0% | |
| GCAAGCAGTGTTTGTGGAAA+TGG | + | chr4.4:88003877-88003896 | MS.gene37317:CDS | 45.0% | |
| GCTTTGCCTGTTATTGCCTT+TGG | + | chr4.4:87999783-87999802 | MS.gene37317:CDS | 45.0% | |
| GGAAGAACACCATTTGAAGG+AGG | - | chr4.4:88003113-88003132 | None:intergenic | 45.0% | |
| GGAATTGACCAAAATACCCC+TGG | - | chr4.4:88000457-88000476 | None:intergenic | 45.0% | |
| GGTGAGGACTAAAGAACTTG+GGG | - | chr4.4:88005051-88005070 | None:intergenic | 45.0% | |
| GTCCATGTAATCGCTAATCC+TGG | + | chr4.4:88000105-88000124 | MS.gene37317:intron | 45.0% | |
| GTGACATGGATTCCAATAGC+TGG | + | chr4.4:88004971-88004990 | MS.gene37317:CDS | 45.0% | |
| GTGCTTTCCGTTCTGGTATT+GGG | + | chr4.4:87999608-87999627 | MS.gene37317:CDS | 45.0% | |
| GTGGGGATACTTTGCATACA+TGG | + | chr4.4:88004564-88004583 | MS.gene37317:CDS | 45.0% | |
| GTGGTGAGGACTAAAGAACT+TGG | - | chr4.4:88005053-88005072 | None:intergenic | 45.0% | |
| GTGTTTCACCCCTGCAAATA+GGG | - | chr4.4:88000608-88000627 | None:intergenic | 45.0% | |
| GTTCTGCAACTCCTACAATG+AGG | - | chr4.4:88001386-88001405 | None:intergenic | 45.0% | |
| TAAGAGCCTCTCAGTTCTCA+AGG | + | chr4.4:88003151-88003170 | MS.gene37317:CDS | 45.0% | |
| TAGAGAGGAAAGACATGGTC+AGG | + | chr4.4:88005401-88005420 | MS.gene37317:CDS | 45.0% | |
| TCTTTGTGTCACCTAGTAGG+TGG | + | chr4.4:88004635-88004654 | MS.gene37317:CDS | 45.0% | |
| TGACGTGGCAGTGATTAAGT+TGG | + | chr4.4:88000498-88000517 | MS.gene37317:intron | 45.0% | |
| TGACGTGGCAGTGATTAAGT+TGG | - | chr4.4:88000517-88000498 | None:intergenic | 45.0% | |
| TGCTCACCAAAGGCAATAAC+AGG | - | chr4.4:87999792-87999811 | None:intergenic | 45.0% | |
| TGTGCTTTCCGTTCTGGTAT+TGG | + | chr4.4:87999607-87999626 | MS.gene37317:CDS | 45.0% | |
| TGTGTTTCACCCCTGCAAAT+AGG | - | chr4.4:88000609-88000628 | None:intergenic | 45.0% | |
| TGTTTCACCCCTGCAAATAG+GGG | - | chr4.4:88000607-88000626 | None:intergenic | 45.0% | |
| ! | ACTAGTTGCTCCTCTAGCTT+GGG | + | chr4.4:88002539-88002558 | MS.gene37317:CDS | 45.0% |
| ! | ACTGTTCATGGTTCGGACTT+CGG | - | chr4.4:88004783-88004802 | None:intergenic | 45.0% |
| ! | ATGGCCATTGATAGTCTTCC+TGG | + | chr4.4:88004583-88004602 | MS.gene37317:CDS | 45.0% |
| ! | TGCCAGGATTAGCGATTACA+GGG | + | chr4.4:88000565-88000584 | MS.gene37317:intron | 45.0% |
| ! | TGCCAGGATTAGCGATTACA+TGG | - | chr4.4:88000584-88000565 | None:intergenic | 45.0% |
| ! | TTGCCAGGATTAGCGATTAC+AGG | + | chr4.4:88000564-88000583 | MS.gene37317:intron | 45.0% |
| !! | AGAGGAGCAACTAGTCTTCT+TGG | - | chr4.4:88002534-88002553 | None:intergenic | 45.0% |
| !! | ATTGGTGGGCTAGACATATG+CGG | - | chr4.4:88000715-88000734 | None:intergenic | 45.0% |
| !! | TCATAGTGTTGCTTCTGGGA+TGG | + | chr4.4:88002869-88002888 | MS.gene37317:CDS | 45.0% |
| !!! | CTATGGTGTGCCTTTTTTGG+TGG | + | chr4.4:88002455-88002474 | MS.gene37317:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+GGG | + | chr4.4:88005709-88005728 | MS.gene37317:intron | 5.0% |
| !! | AAAAAAAAATTCAAATAAAA+CGG | - | chr4.4:88001780-88001799 | None:intergenic | 5.0% |
| !! | AAAAAATCATAAAAAAAATT+CGG | - | chr4.4:88000291-88000310 | None:intergenic | 5.0% |
| !! | TATTAATGATTAAATTAAAT+GGG | + | chr4.4:88003741-88003760 | MS.gene37317:intron | 5.0% |
| ACACAGACACGACACAACCA+TGG | + | chr4.4:88004175-88004194 | MS.gene37317:intron | 50.0% | |
| ATGGTTGTGTCGTGTCTGTG+TGG | - | chr4.4:88004176-88004195 | None:intergenic | 50.0% | |
| CAACACGACACTGACACATG+TGG | - | chr4.4:88004252-88004271 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCGTGT+TGG | + | chr4.4:88004250-88004269 | MS.gene37317:intron | 50.0% | |
| CTCCTACAATGAGGAGTGGT+TGG | - | chr4.4:88001377-88001396 | None:intergenic | 50.0% | |
| CTGGCTTCTACAGCCATTTG+TGG | + | chr4.4:88001327-88001346 | MS.gene37317:CDS | 50.0% | |
| CTTTGCAAGGGCAATTTGCC+AGG | - | chr4.4:88000126-88000145 | None:intergenic | 50.0% | |
| GAGGACTAAAGAACTTGGGG+AGG | - | chr4.4:88005048-88005067 | None:intergenic | 50.0% | |
| GATGGAGATTCCCAAGCTAG+AGG | - | chr4.4:88002552-88002571 | None:intergenic | 50.0% | |
| GCAACTCCTACAATGAGGAG+TGG | - | chr4.4:88001381-88001400 | None:intergenic | 50.0% | |
| GGGTCATCATGCTTCCTTTG+TGG | + | chr4.4:88004877-88004896 | MS.gene37317:CDS | 50.0% | |
| GTAAAGCCCTGCTACCATCA+AGG | - | chr4.4:88002841-88002860 | None:intergenic | 50.0% | |
| GTCCCTGTAATCGCTAATCC+TGG | - | chr4.4:88000570-88000589 | None:intergenic | 50.0% | |
| TATGCTGCAGGACATGGGAA+GGG | + | chr4.4:88002779-88002798 | MS.gene37317:intron | 50.0% | |
| TCAGTTCTCAAGGGTCTGGT+AGG | + | chr4.4:88003161-88003180 | MS.gene37317:intron | 50.0% | |
| TCGATTCAGCTGCTCACCAA+AGG | - | chr4.4:87999802-87999821 | None:intergenic | 50.0% | |
| TCTCTTTCAGATCGGCAGCA+GGG | - | chr4.4:88003659-88003678 | None:intergenic | 50.0% | |
| TGCGGTGGTCCAAAAATTGG+TGG | - | chr4.4:88000697-88000716 | None:intergenic | 50.0% | |
| TGGACTTGTGCTTTCCGTTC+TGG | + | chr4.4:87999601-87999620 | MS.gene37317:CDS | 50.0% | |
| TTAGTCTCCACAGTTACGCG+CGG | - | chr4.4:87999889-87999908 | None:intergenic | 50.0% | |
| TTATGCTGCAGGACATGGGA+AGG | + | chr4.4:88002778-88002797 | MS.gene37317:intron | 50.0% | |
| ! | ATTCCTGCCTTGATGGTAGC+AGG | + | chr4.4:88002831-88002850 | MS.gene37317:CDS | 50.0% |
| ! | GACTAGTTGCTCCTCTAGCT+TGG | + | chr4.4:88002538-88002557 | MS.gene37317:CDS | 50.0% |
| ! | TTCCTGCCTTGATGGTAGCA+GGG | + | chr4.4:88002832-88002851 | MS.gene37317:CDS | 50.0% |
| !! | TTCTGGGATGGCACAACAGA+AGG | + | chr4.4:88002881-88002900 | MS.gene37317:CDS | 50.0% |
| !!! | GAACTCTTTTTGGCTTGGGC+TGG | + | chr4.4:88001468-88001487 | MS.gene37317:CDS | 50.0% |
| !!! | TCTTTTTGGCTTGGGCTGGA+TGG | + | chr4.4:88001472-88001491 | MS.gene37317:CDS | 50.0% |
| CCAGACCCTTGAGAACTGAG+AGG | - | chr4.4:88003160-88003179 | None:intergenic | 55.0% | |
| CCTCTCAGTTCTCAAGGGTC+TGG | + | chr4.4:88003157-88003176 | MS.gene37317:CDS | 55.0% | |
| CTTTGCTGGGGCAATTTGCC+AGG | + | chr4.4:88000549-88000568 | MS.gene37317:intron | 55.0% | |
| GAGCAGCTGAATCGAGACAC+AGG | + | chr4.4:87999807-87999826 | MS.gene37317:CDS | 55.0% | |
| GGCCAACCACTCCTCATTGT+AGG | + | chr4.4:88001372-88001391 | MS.gene37317:CDS | 55.0% | |
| GTATCATCCGCGCGTAACTG+TGG | + | chr4.4:87999879-87999898 | MS.gene37317:intron | 55.0% | |
| GTCTCTTTCAGATCGGCAGC+AGG | - | chr4.4:88003660-88003679 | None:intergenic | 55.0% | |
| AGCCCTGCTACCATCAAGGC+AGG | - | chr4.4:88002837-88002856 | None:intergenic | 60.0% | |
| CTTTCAGATCGGCAGCAGGG+TGG | - | chr4.4:88003656-88003675 | None:intergenic | 60.0% | |
| !! | GGTGGGCTAGACATATGCGG+TGG | - | chr4.4:88000712-88000731 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 87999526 | 88005972 | 87999526 | ID=MS.gene37317 |
| chr4.4 | mRNA | 87999526 | 88005972 | 87999526 | ID=MS.gene37317.t1;Parent=MS.gene37317 |
| chr4.4 | exon | 87999526 | 87999629 | 87999526 | ID=MS.gene37317.t1.exon1;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 87999526 | 87999629 | 87999526 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 87999746 | 87999828 | 87999746 | ID=MS.gene37317.t1.exon2;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 87999746 | 87999828 | 87999746 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88001301 | 88001493 | 88001301 | ID=MS.gene37317.t1.exon3;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88001301 | 88001493 | 88001301 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88001891 | 88002029 | 88001891 | ID=MS.gene37317.t1.exon4;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88001891 | 88002029 | 88001891 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88002132 | 88002297 | 88002132 | ID=MS.gene37317.t1.exon5;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88002132 | 88002297 | 88002132 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88002430 | 88002596 | 88002430 | ID=MS.gene37317.t1.exon6;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88002430 | 88002596 | 88002430 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88002789 | 88002962 | 88002789 | ID=MS.gene37317.t1.exon7;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88002789 | 88002962 | 88002789 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88003083 | 88003178 | 88003083 | ID=MS.gene37317.t1.exon8;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88003083 | 88003178 | 88003083 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88003797 | 88003913 | 88003797 | ID=MS.gene37317.t1.exon9;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88003797 | 88003913 | 88003797 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88004346 | 88004662 | 88004346 | ID=MS.gene37317.t1.exon10;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88004346 | 88004662 | 88004346 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88004868 | 88005135 | 88004868 | ID=MS.gene37317.t1.exon11;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88004868 | 88005135 | 88004868 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88005297 | 88005422 | 88005297 | ID=MS.gene37317.t1.exon12;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88005297 | 88005422 | 88005297 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| chr4.4 | exon | 88005964 | 88005972 | 88005964 | ID=MS.gene37317.t1.exon13;Parent=MS.gene37317.t1 |
| chr4.4 | CDS | 88005964 | 88005972 | 88005964 | ID=cds.MS.gene37317.t1;Parent=MS.gene37317.t1 |
| Gene Sequence |
| Protein sequence |
