AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86346

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86346.t1 MTR_0459s0020 97.063 647 19 0 5 651 9 655 0.0 1288
MS.gene86346.t1 MTR_0366s0020 84.853 647 14 2 5 651 9 571 0.0 1083
MS.gene86346.t1 MTR_3g107730 67.018 664 209 5 11 670 4 661 0.0 897
MS.gene86346.t1 MTR_1g011840 65.596 654 211 5 11 659 3 647 0.0 878
MS.gene86346.t1 MTR_7g110000 59.242 660 250 7 5 653 1 652 0.0 753
MS.gene86346.t1 MTR_3g107730 69.767 516 150 3 11 526 4 513 0.0 752
MS.gene86346.t1 MTR_3g077670 59.327 654 250 8 5 648 1 648 0.0 734
MS.gene86346.t1 MTR_2g032690 55.639 665 282 7 5 663 1 658 0.0 724
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86346.t1 AT1G15460 73.152 663 170 5 9 666 10 669 0.0 1001
MS.gene86346.t1 AT1G15460 73.152 663 170 5 9 666 10 669 0.0 1001
MS.gene86346.t1 AT1G74810 70.181 664 190 6 9 667 10 670 0.0 962
MS.gene86346.t1 AT1G74810 70.181 664 190 6 9 667 10 670 0.0 962
MS.gene86346.t1 AT1G74810 70.181 664 190 6 9 667 10 670 0.0 962
MS.gene86346.t1 AT1G15460 74.351 616 152 3 9 619 10 624 0.0 948
MS.gene86346.t1 AT1G74810 70.616 633 178 6 40 667 9 638 0.0 919
MS.gene86346.t1 AT1G74810 70.616 633 178 6 40 667 9 638 0.0 919
MS.gene86346.t1 AT4G32510 64.837 674 220 4 5 665 1 670 0.0 895
MS.gene86346.t1 AT4G32510 64.497 676 221 5 5 665 1 672 0.0 890
MS.gene86346.t1 AT5G25430 64.211 665 226 5 11 665 9 671 0.0 877
MS.gene86346.t1 AT1G15460 72.085 566 150 5 106 666 1 563 0.0 842
MS.gene86346.t1 AT1G74810 69.136 567 167 6 106 667 1 564 0.0 808
MS.gene86346.t1 AT3G62270 58.462 650 258 6 5 648 1 644 0.0 769
MS.gene86346.t1 AT2G47160 58.742 652 252 7 5 648 1 643 0.0 763
MS.gene86346.t1 AT2G47160 56.573 677 252 8 5 648 1 668 0.0 750
MS.gene86346.t1 AT1G74810 68.868 530 157 6 143 667 1 527 0.0 749
MS.gene86346.t1 AT3G06450 56.786 641 268 6 11 648 9 643 0.0 740
MS.gene86346.t1 AT3G06450 56.786 641 268 6 11 648 9 643 0.0 740
MS.gene86346.t1 AT3G06450 56.786 641 268 6 11 648 9 643 0.0 740
MS.gene86346.t1 AT3G06450 56.786 641 268 6 11 648 9 643 0.0 740

Find 150 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAAGATGATTGGATTTC+TGG 0.111845 2.3:-1800480 MS.gene86346:CDS
GTCTTCCAGGGAATCAATTT+TGG 0.134809 2.3:-1797241 MS.gene86346:CDS
CTTCCAATGTGTGTATTTCT+TGG 0.170065 2.3:-1796969 MS.gene86346:CDS
CTTTGCTCCTTTACTCTTAC+AGG 0.197580 2.3:+1797380 None:intergenic
CTCCTTTATCTTCACCATTT+AGG 0.206563 2.3:+1797453 None:intergenic
TTGCATACAACCAATGAAAT+TGG 0.241608 2.3:+1799244 None:intergenic
ATTTCCTTTGATCCAACTTT+AGG 0.269524 2.3:+1796410 None:intergenic
ACTTTGCTTTGTGGACTAAT+TGG 0.274971 2.3:-1798275 MS.gene86346:CDS
ATGGCTATTGATAGTCTTCC+AGG 0.288176 2.3:-1797254 MS.gene86346:CDS
TTTGGGAAGAGAACTCTATT+TGG 0.299541 2.3:-1799817 MS.gene86346:CDS
CAACAAAGAGTGATTGTAAA+AGG 0.321096 2.3:+1797348 None:intergenic
GCTAGCAACTCTGAAATATA+TGG 0.324871 2.3:-1797769 MS.gene86346:CDS
TCTGGTCTCACCTCGGGAAC+CGG 0.338415 2.3:-1800462 MS.gene86346:CDS
AAAGTTGGATCAAAGGAAAT+AGG 0.338981 2.3:-1796407 MS.gene86346:CDS
GTCCTAAATGGTGAAGATAA+AGG 0.340166 2.3:-1797455 MS.gene86346:CDS
CATATTGTTACTAGGATTCA+TGG 0.345583 2.3:-1798404 MS.gene86346:intron
GAACTTTAAAACACCTTTCA+AGG 0.350968 2.3:-1800538 MS.gene86346:CDS
CTAGGAATTATATTTACATT+TGG 0.352264 2.3:-1799213 MS.gene86346:CDS
AGAGCAAGGTCATGCTTATA+TGG 0.359024 2.3:-1799162 MS.gene86346:CDS
AAAGGTGCAATGAGTCTTCT+TGG 0.360459 2.3:+1798769 None:intergenic
TGTAAATCTATTGATGATAA+TGG 0.361270 2.3:+1799500 None:intergenic
AAGAAGACTCATTGCACCTT+TGG 0.363002 2.3:-1798767 MS.gene86346:CDS
AAGTTTCAATATATCCTTCC+AGG 0.363554 2.3:-1796780 MS.gene86346:intron
TTTCTTCCCTATGCTTTCCT+TGG 0.368598 2.3:+1797792 None:intergenic
CTTCAACTCCCCTCTATTAG+TGG 0.374928 2.3:+1796358 None:intergenic
TTTCATTGGTTGTATGCAAA+TGG 0.375839 2.3:-1799240 MS.gene86346:CDS
GTGTATTTCTTGGTTTGTTT+CGG 0.376715 2.3:-1796959 MS.gene86346:CDS
TGGATAAATACCAATTTCAT+TGG 0.376832 2.3:-1799254 MS.gene86346:CDS
GTTCAGTCCAAACCATCTTA+TGG 0.377113 2.3:-1796849 MS.gene86346:CDS
GCTCTACCTGTTATTGCCTT+CGG 0.378072 2.3:-1800140 MS.gene86346:CDS
GCAAGCAGTGTTTATAGAAA+TGG 0.379967 2.3:-1797740 MS.gene86346:CDS
GACTCATTGCACCTTTGGCT+TGG 0.386343 2.3:-1798762 MS.gene86346:CDS
ACTCATTGCACCTTTGGCTT+GGG 0.387576 2.3:-1798761 MS.gene86346:CDS
AATAGATTTACAAGGATTGC+TGG 0.391026 2.3:-1799489 MS.gene86346:CDS
CCTTCGGCGCGCAGCTCAGT+AGG 0.392561 2.3:-1800124 MS.gene86346:CDS
TCTAGTTCCATAAGATGGTT+TGG 0.393919 2.3:+1796842 None:intergenic
AACATTTAGACTTTGCTTTG+TGG 0.398189 2.3:-1798284 MS.gene86346:intron
TGCGCGCCGAAGGCAATAAC+AGG 0.398211 2.3:+1800134 None:intergenic
GATGAGTTAACCACTAATAG+AGG 0.399090 2.3:-1796368 MS.gene86346:CDS
CACTATGACATATTGTTACT+AGG 0.400411 2.3:-1798412 MS.gene86346:CDS
TTCTGTTTCTTGCAGGTTGT+TGG 0.401494 2.3:-1797053 MS.gene86346:intron
CTAATGTAATGACAGGATAT+TGG 0.402665 2.3:-1800192 MS.gene86346:intron
TGGTTTGGACTGAACAGCTT+GGG 0.404145 2.3:+1796857 None:intergenic
GTGGGGATACTTTGCTTACA+TGG 0.406005 2.3:-1797273 MS.gene86346:CDS
GTAAAGCCCTGCTATCATTA+AGG 0.406993 2.3:+1798507 None:intergenic
GGGAACAACATTCCAGCAAT+TGG 0.408916 2.3:+1796923 None:intergenic
TATGTATCAATGTGTTTCTC+AGG 0.414246 2.3:+1797407 None:intergenic
ATTGGTTTGCCTCCTTCAAA+TGG 0.421666 2.3:-1798257 MS.gene86346:CDS
GTAGCAAATAAAGTACCTTC+TGG 0.422686 2.3:-1798796 MS.gene86346:CDS
AGGTCATGCTTATATGGAAC+AGG 0.425893 2.3:-1799156 MS.gene86346:intron
ATTCATTCAAGAAGCTATCA+AGG 0.426466 2.3:-1799436 MS.gene86346:intron
AACAATACTATATGTTTGAA+TGG 0.431054 2.3:+1796998 None:intergenic
CTGGCTTCTACAGCCATTTG+TGG 0.431750 2.3:-1799948 MS.gene86346:CDS
TCTGGCTGTTCTCAAGAAAC+AGG 0.433528 2.3:-1798201 MS.gene86346:intron
CCCTATGCACACTAAGAGTC+TGG 0.433791 2.3:-1798219 MS.gene86346:CDS
TGGATTTCTGGTCTCACCTC+GGG 0.434401 2.3:-1800468 MS.gene86346:CDS
CCATAGCGTTGCGTCCCAAC+TGG 0.436546 2.3:-1798476 MS.gene86346:CDS
TAATTTCTACTGCAGGATAT+GGG 0.437992 2.3:-1798571 MS.gene86346:intron
GGATATGGGGAAGGTTTCTC+TGG 0.440745 2.3:-1798557 MS.gene86346:CDS
GTGACATGGATTCCAATTGC+TGG 0.442062 2.3:-1796935 MS.gene86346:CDS
CCTTTGAACGGTAGTTGATC+CGG 0.442317 2.3:-1797834 MS.gene86346:intron
CTTTCCCAAAATTGATTCCC+TGG 0.443499 2.3:+1797236 None:intergenic
TGTACAAATATGTGTACATA+AGG 0.443809 2.3:+1799862 None:intergenic
TAGTGAGGAAAGAAATAATC+AGG 0.446285 2.3:-1796318 MS.gene86346:intron
CCAGACTCTTAGTGTGCATA+GGG 0.449413 2.3:+1798219 None:intergenic
AAGAGAACTCTATTTGGCTT+GGG 0.450177 2.3:-1799811 MS.gene86346:CDS
AGACTACGGAGTACCATTCT+TGG 0.450555 2.3:-1798851 MS.gene86346:CDS
GTTCCAGCCTTAATGATAGC+AGG 0.457381 2.3:-1798514 MS.gene86346:CDS
GAAGAGAACTCTATTTGGCT+TGG 0.460219 2.3:-1799812 MS.gene86346:CDS
CACTAATAGAGGGGAGTTGA+AGG 0.464456 2.3:-1796357 MS.gene86346:CDS
ACTTACTTGTACCATCTACT+AGG 0.469677 2.3:+1797191 None:intergenic
GTCCCAACTGGCACAACAAA+AGG 0.471942 2.3:-1798464 MS.gene86346:CDS
CTGCATCTAGTTCCATAAGA+TGG 0.475531 2.3:+1796837 None:intergenic
AATTGGTATTTATCCAATGT+TGG 0.476559 2.3:+1799261 None:intergenic
ATATGTGTACATAAGGATAG+TGG 0.481601 2.3:+1799869 None:intergenic
GTCCACACCACGACCAAGAA+TGG 0.488986 2.3:+1798838 None:intergenic
CAGTACACTATAAAGATGAT+TGG 0.496597 2.3:-1800488 MS.gene86346:CDS
GATACCAACTTCAGTATTGT+GGG 0.497715 2.3:-1797291 MS.gene86346:CDS
GATATATTGAAACTTAGTCT+TGG 0.499697 2.3:+1796788 None:intergenic
TGATACCAACTTCAGTATTG+TGG 0.501818 2.3:-1797292 MS.gene86346:CDS
GGACAACCTCTTCTAATACT+AGG 0.505448 2.3:-1799903 MS.gene86346:CDS
TGAGGCAGAACTCCATTTGA+AGG 0.507599 2.3:+1798245 None:intergenic
TGAGTTTGAAGTTCCTAAAG+AGG 0.507705 2.3:-1799289 MS.gene86346:CDS
CTGGTCTCACCTCGGGAACC+GGG 0.509024 2.3:-1800461 MS.gene86346:intron
TCTATTTGGCTTGGGTAGGA+TGG 0.515571 2.3:-1799803 MS.gene86346:intron
TATCCCCACAATACTGAAGT+TGG 0.522863 2.3:+1797287 None:intergenic
TGGTTTGTTTCGGAGTGACA+TGG 0.525308 2.3:-1796949 MS.gene86346:CDS
AGAAGTTTCATTGCAGACTA+CGG 0.527536 2.3:-1798865 MS.gene86346:CDS
GAGGTTGAATCACCTAAAGT+TGG 0.531337 2.3:-1796422 MS.gene86346:CDS
GGAGTGTATGATTCCACAAA+TGG 0.533498 2.3:+1799935 None:intergenic
ATGGTTTGGACTGAACAGCT+TGG 0.538575 2.3:+1796856 None:intergenic
AAACTTAGTCTTGGAGCACC+AGG 0.539260 2.3:+1796797 None:intergenic
ATTCAATCTCAAGAAACCTT+CGG 0.539298 2.3:-1798440 MS.gene86346:CDS
AATCTGCATCATTACATCAC+TGG 0.540888 2.3:-1798738 MS.gene86346:CDS
AGCCCTGCTATCATTAAGGC+TGG 0.544922 2.3:+1798511 None:intergenic
CCAGTTGGGACGCAACGCTA+TGG 0.547389 2.3:+1798476 None:intergenic
ATCACCTAAAGTTGGATCAA+AGG 0.548835 2.3:-1796414 MS.gene86346:CDS
ACATCACTGGACAGTAATCA+AGG 0.549188 2.3:-1798725 MS.gene86346:intron
GTTTCTTGCAGGTTGTTGGA+AGG 0.549562 2.3:-1797049 MS.gene86346:intron
TTCCAGCCTTAATGATAGCA+GGG 0.549869 2.3:-1798513 MS.gene86346:CDS
ATATTTGCCTGTAAGAGTAA+AGG 0.551233 2.3:-1797387 MS.gene86346:CDS
TACCATTCTTGGTCGTGGTG+TGG 0.555716 2.3:-1798840 MS.gene86346:CDS
TTATCATCAATAGATTTACA+AGG 0.558991 2.3:-1799497 MS.gene86346:CDS
CTTAAGCACTGTGGAAACAC+TGG 0.559948 2.3:-1799967 MS.gene86346:CDS
AAAAGTGCCAAGGAAAGCAT+AGG 0.560350 2.3:-1797799 MS.gene86346:CDS
AAACCAAGAAATACACACAT+TGG 0.560504 2.3:+1796966 None:intergenic
CCTACTGAGCTGCGCGCCGA+AGG 0.560683 2.3:+1800124 None:intergenic
CGGAGTACCATTCTTGGTCG+TGG 0.560811 2.3:-1798845 MS.gene86346:CDS
AACTTTAAAACACCTTTCAA+GGG 0.561664 2.3:-1800537 MS.gene86346:CDS
AACATTTCAGGGTTTGTGTG+TGG 0.563862 2.3:-1799563 MS.gene86346:intron
TCTACTGCAGGATATGGGGA+AGG 0.568225 2.3:-1798566 MS.gene86346:intron
TTGTATGCAAATGGATTGCT+AGG 0.570857 2.3:-1799231 MS.gene86346:CDS
ACCTCTTCTAATACTAGGAG+TGG 0.574905 2.3:-1799898 MS.gene86346:CDS
GAGTTTGAAGTTCCTAAAGA+GGG 0.576153 2.3:-1799288 MS.gene86346:CDS
ATGAGTTAACCACTAATAGA+GGG 0.578037 2.3:-1796367 MS.gene86346:CDS
TATGTGTACATAAGGATAGT+GGG 0.579317 2.3:+1799870 None:intergenic
AGTCTTCTTGGAACTCCAGA+AGG 0.583320 2.3:+1798781 None:intergenic
TCATCTACAATACCCTTGAA+AGG 0.584023 2.3:+1800525 None:intergenic
TTCAGTGGTAAAAGAACTAG+AGG 0.584201 2.3:-1797492 MS.gene86346:CDS
GTAGTTGATCCGGAGAAAGA+TGG 0.584537 2.3:-1797824 MS.gene86346:intron
CTTCGGCGCGCAGCTCAGTA+GGG 0.585033 2.3:-1800123 MS.gene86346:CDS
GCGAAGAAAATATACATAGT+CGG 0.586779 2.3:+1800167 None:intergenic
TTGGATTTCTGGTCTCACCT+CGG 0.587523 2.3:-1800469 MS.gene86346:CDS
GCCACTCCTAGTATTAGAAG+AGG 0.587604 2.3:+1799897 None:intergenic
GAACTCTATTTGGCTTGGGT+AGG 0.592053 2.3:-1799807 MS.gene86346:CDS
AAAGTGCCAAGGAAAGCATA+GGG 0.599451 2.3:-1797798 MS.gene86346:CDS
CTTTGAAAAGCAGAAGAGCA+AGG 0.604028 2.3:-1799176 MS.gene86346:CDS
AATTTCTACTGCAGGATATG+GGG 0.605058 2.3:-1798570 MS.gene86346:intron
TGGCTATTGATAGTCTTCCA+GGG 0.607509 2.3:-1797253 MS.gene86346:CDS
TAGTTTGAATCAATTTCATG+AGG 0.613539 2.3:+1796188 None:intergenic
AAAGATGGTTAAAAGTGCCA+AGG 0.615685 2.3:-1797809 MS.gene86346:CDS
GGTTTGGACTGAACAGCTTG+GGG 0.624998 2.3:+1796858 None:intergenic
GCCAGACTCTTAGTGTGCAT+AGG 0.628841 2.3:+1798218 None:intergenic
TTAAGCTCAGGATACCTGGA+AGG 0.629128 2.3:+1796766 None:intergenic
AGAAGCTTACCCGGTTCCCG+AGG 0.631856 2.3:+1800452 None:intergenic
GCGCAGCTCAGTAGGGACAC+AGG 0.636641 2.3:-1800116 MS.gene86346:intron
TTAGTGTGCATAGGGGATTG+AGG 0.641800 2.3:+1798227 None:intergenic
GGCAGAACTCCATTTGAAGG+AGG 0.642786 2.3:+1798248 None:intergenic
CAGAACTACTAGCTTTAGTG+AGG 0.650371 2.3:-1796333 MS.gene86346:CDS
ATGTCATAGTGATATGCCGA+AGG 0.651877 2.3:+1798424 None:intergenic
AGTTTGAAGTTCCTAAAGAG+GGG 0.658460 2.3:-1799287 MS.gene86346:CDS
GATGCAGATTCCCAAGCCAA+AGG 0.659339 2.3:+1798751 None:intergenic
GTTTGAAGTTCCTAAAGAGG+GGG 0.659389 2.3:-1799286 MS.gene86346:CDS
GAATGGTACTGACTCAACAA+AGG 0.665677 2.3:+1797015 None:intergenic
ATACCAACTTCAGTATTGTG+GGG 0.692806 2.3:-1797290 MS.gene86346:CDS
CAGACTCTTAGTGTGCATAG+GGG 0.698650 2.3:+1798220 None:intergenic
TGAGTTAACCACTAATAGAG+GGG 0.699565 2.3:-1796366 MS.gene86346:CDS
GGTTCTGCAGAATCATTCAG+TGG 0.700197 2.3:-1797507 MS.gene86346:intron
AGATGGAAGCTTAAGCACTG+TGG 0.724558 2.3:-1799976 MS.gene86346:CDS
GCTGAATATGAAGAAATACC+TGG 0.725840 2.3:-1796815 MS.gene86346:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAAAGAAATTAAAATC+TGG + chr2.3:1797691-1797710 None:intergenic 10.0%
!! TTTATATATAATATCTTGTA+TGG - chr2.3:1798374-1798393 MS.gene86346:intron 10.0%
!! ATGAAATATCATAATTGAAA+AGG + chr2.3:1800238-1800257 None:intergenic 15.0%
!! ATTATTGTATTGAATCTTTA+GGG - chr2.3:1797421-1797440 MS.gene86346:CDS 15.0%
!! TATTATTGTATTGAATCTTT+AGG - chr2.3:1797420-1797439 MS.gene86346:CDS 15.0%
!!! CTTTTGCTAATAAATATATT+CGG - chr2.3:1799068-1799087 MS.gene86346:intron 15.0%
!!! TCATGTATATTTTGTTAAAA+TGG + chr2.3:1799596-1799615 None:intergenic 15.0%
!! AACAATACTATATGTTTGAA+TGG + chr2.3:1799747-1799766 None:intergenic 20.0%
!! AAGATTGAATTTGATATTAG+GGG - chr2.3:1798607-1798626 MS.gene86346:intron 20.0%
!! AATAATACTAATGTAATGAC+AGG - chr2.3:1796543-1796562 MS.gene86346:intron 20.0%
!! ACTTATTTGAGCTTATATAT+TGG - chr2.3:1798643-1798662 MS.gene86346:intron 20.0%
!! CAAGATTGAATTTGATATTA+GGG - chr2.3:1798606-1798625 MS.gene86346:intron 20.0%
!! CGAATATATTTATTAGCAAA+AGG + chr2.3:1799070-1799089 None:intergenic 20.0%
!! CTAGGAATTATATTTACATT+TGG - chr2.3:1797529-1797548 MS.gene86346:intron 20.0%
!! TACAAAATACAAACAAGAAA+TGG + chr2.3:1796747-1796766 None:intergenic 20.0%
!! TATCAAATGAAACATGAATT+TGG - chr2.3:1797369-1797388 MS.gene86346:CDS 20.0%
!! TTATCATCAATAGATTTACA+AGG - chr2.3:1797245-1797264 MS.gene86346:CDS 20.0%
!!! ATGTTTTAATCATTGTCTAA+TGG - chr2.3:1797148-1797167 MS.gene86346:intron 20.0%
!!! TATATTTTACACAATACTCT+AGG - chr2.3:1800264-1800283 MS.gene86346:intron 20.0%
!!! TGTAAATCTATTGATGATAA+TGG + chr2.3:1797245-1797264 None:intergenic 20.0%
!!! TTCTATACTTTTTTTGTAAC+AGG - chr2.3:1800298-1800317 MS.gene86346:intron 20.0%
! AAAATGACAAAATTAAGCTC+AGG + chr2.3:1799991-1800010 None:intergenic 25.0%
! AATTATGCCAAAAATAAGGA+AGG - chr2.3:1796902-1796921 MS.gene86346:CDS 25.0%
! AATTGGTATTTATCCAATGT+TGG + chr2.3:1797484-1797503 None:intergenic 25.0%
! AGATATATAACAAAGTCCAA+TGG + chr2.3:1798069-1798088 None:intergenic 25.0%
! ATATATGTTAATCCAAACAG+GGG + chr2.3:1796994-1797013 None:intergenic 25.0%
! ATGGATGTTATTAACATTTC+AGG - chr2.3:1797167-1797186 MS.gene86346:intron 25.0%
! ATTGAAATAAACACTAACAC+CGG - chr2.3:1799619-1799638 MS.gene86346:intron 25.0%
! CATATATGTTAATCCAAACA+GGG + chr2.3:1796995-1797014 None:intergenic 25.0%
! GATATATTGAAACTTAGTCT+TGG + chr2.3:1799957-1799976 None:intergenic 25.0%
! GCAAGATTGAATTTGATATT+AGG - chr2.3:1798605-1798624 MS.gene86346:intron 25.0%
! GTACAATTATGCCAAAAATA+AGG - chr2.3:1796898-1796917 MS.gene86346:CDS 25.0%
! TAGTTTGAATCAATTTCATG+AGG + chr2.3:1800557-1800576 None:intergenic 25.0%
! TATAAAGATGATTGGATTTC+TGG - chr2.3:1796262-1796281 MS.gene86346:intron 25.0%
! TATAGCATATTGAAAACCAT+TGG - chr2.3:1798050-1798069 MS.gene86346:intron 25.0%
! TATCATAATTGAAAAGGCTT+TGG + chr2.3:1800232-1800251 None:intergenic 25.0%
! TCAATTAAGTCAATCAAAAC+AGG - chr2.3:1797115-1797134 MS.gene86346:intron 25.0%
! TGGATAAATACCAATTTCAT+TGG - chr2.3:1797488-1797507 MS.gene86346:CDS 25.0%
! TGGATGTTATTAACATTTCA+GGG - chr2.3:1797168-1797187 MS.gene86346:intron 25.0%
! TGTACAAATATGTGTACATA+AGG + chr2.3:1796883-1796902 None:intergenic 25.0%
! TTTATCTAACATATGCACTT+GGG + chr2.3:1797094-1797113 None:intergenic 25.0%
!! TCATGAAATTGATTCAAACT+AGG - chr2.3:1800556-1800575 MS.gene86346:CDS 25.0%
!! TTGAAAGATTTTGTCCTAAA+TGG - chr2.3:1799275-1799294 MS.gene86346:CDS 25.0%
!!! AACTTTAAAACACCTTTCAA+GGG - chr2.3:1796205-1796224 MS.gene86346:intron 25.0%
!!! CATACTTGCATGAATTTTTT+TGG + chr2.3:1796371-1796390 None:intergenic 25.0%
!!! TATACTTTTTTTGTAACAGG+AGG - chr2.3:1800301-1800320 MS.gene86346:intron 25.0%
!!! TCTTGTTTGTATTTTGTAGA+TGG - chr2.3:1796749-1796768 MS.gene86346:intron 25.0%
!!! TGAAGTTGGTATCATTTTTA+TGG + chr2.3:1799444-1799463 None:intergenic 25.0%
!!! TTTTCAAAGAAGTATAGAGA+AGG + chr2.3:1797555-1797574 None:intergenic 25.0%
AAACCAAGAAATACACACAT+TGG + chr2.3:1799779-1799798 None:intergenic 30.0%
AAAGTTGGATCAAAGGAAAT+AGG - chr2.3:1800335-1800354 MS.gene86346:intron 30.0%
AACATTTAGACTTTGCTTTG+TGG - chr2.3:1798458-1798477 MS.gene86346:CDS 30.0%
AAGTTTCAATATATCCTTCC+AGG - chr2.3:1799962-1799981 MS.gene86346:CDS 30.0%
AATAGATTTACAAGGATTGC+TGG - chr2.3:1797253-1797272 MS.gene86346:CDS 30.0%
AATGTGATCAGCAAAAAGAA+TGG + chr2.3:1799849-1799868 None:intergenic 30.0%
AATTCATGCAAGTATGATCA+TGG - chr2.3:1796375-1796394 MS.gene86346:CDS 30.0%
ACATTGTTTGTTTATTGAGC+AGG - chr2.3:1797847-1797866 MS.gene86346:intron 30.0%
ATAATTTCTACTGCAGGATA+TGG - chr2.3:1798170-1798189 MS.gene86346:intron 30.0%
ATATACACAAAGCCTGAATA+TGG - chr2.3:1798874-1798893 MS.gene86346:CDS 30.0%
ATATGTGTACATAAGGATAG+TGG + chr2.3:1796876-1796895 None:intergenic 30.0%
ATATTTGCCTGTAAGAGTAA+AGG - chr2.3:1799355-1799374 MS.gene86346:intron 30.0%
ATGAGTTAACCACTAATAGA+GGG - chr2.3:1800375-1800394 MS.gene86346:intron 30.0%
ATTCAATCTCAAGAAACCTT+CGG - chr2.3:1798302-1798321 MS.gene86346:intron 30.0%
ATTCATTCAAGAAGCTATCA+AGG - chr2.3:1797306-1797325 MS.gene86346:CDS 30.0%
ATTTCCTTTGATCCAACTTT+AGG + chr2.3:1800335-1800354 None:intergenic 30.0%
CAACAAAGAGTGATTGTAAA+AGG + chr2.3:1799397-1799416 None:intergenic 30.0%
CACTATGACATATTGTTACT+AGG - chr2.3:1798330-1798349 MS.gene86346:intron 30.0%
CAGTACACTATAAAGATGAT+TGG - chr2.3:1796254-1796273 MS.gene86346:intron 30.0%
CATATTGTTACTAGGATTCA+TGG - chr2.3:1798338-1798357 MS.gene86346:intron 30.0%
CATTGTTTGTTTATTGAGCA+GGG - chr2.3:1797848-1797867 MS.gene86346:intron 30.0%
CTAATGTAATGACAGGATAT+TGG - chr2.3:1796550-1796569 MS.gene86346:intron 30.0%
GAAAATGAATCACCATATTC+AGG + chr2.3:1798889-1798908 None:intergenic 30.0%
GCATATATGTTAATCCAAAC+AGG + chr2.3:1796996-1797015 None:intergenic 30.0%
GCGAAGAAAATATACATAGT+CGG + chr2.3:1796578-1796597 None:intergenic 30.0%
GTTTATCTAACATATGCACT+TGG + chr2.3:1797095-1797114 None:intergenic 30.0%
TAATTTCTACTGCAGGATAT+GGG - chr2.3:1798171-1798190 MS.gene86346:intron 30.0%
TAGTGAGGAAAGAAATAATC+AGG - chr2.3:1800424-1800443 MS.gene86346:intron 30.0%
TATGTATCAATGTGTTTCTC+AGG + chr2.3:1799338-1799357 None:intergenic 30.0%
TATGTGTACATAAGGATAGT+GGG + chr2.3:1796875-1796894 None:intergenic 30.0%
TTGCATACAACCAATGAAAT+TGG + chr2.3:1797501-1797520 None:intergenic 30.0%
TTTATTAGCAAAAGGATGAG+AGG + chr2.3:1799062-1799081 None:intergenic 30.0%
! AGAACCAGAATTTTATAGGA+CGG + chr2.3:1799148-1799167 None:intergenic 30.0%
! CTTTTACAATCACTCTTTGT+TGG - chr2.3:1799395-1799414 MS.gene86346:intron 30.0%
! GGTATTGTAGATGATTTTAG+GGG - chr2.3:1796226-1796245 MS.gene86346:intron 30.0%
! GTGATTCATTTTCCTTTGAA+CGG - chr2.3:1798896-1798915 MS.gene86346:intron 30.0%
! GTTCAGAACCAGAATTTTAT+AGG + chr2.3:1799152-1799171 None:intergenic 30.0%
! TGTATTGAATCTTTAGGGAA+TGG - chr2.3:1797426-1797445 MS.gene86346:CDS 30.0%
! TTTCAATGATGAGTTTTTGC+AGG - chr2.3:1800526-1800545 MS.gene86346:CDS 30.0%
! TTTCATTGGTTGTATGCAAA+TGG - chr2.3:1797502-1797521 MS.gene86346:intron 30.0%
! TTTGATATTAGGGGTTTGTT+TGG - chr2.3:1798616-1798635 MS.gene86346:intron 30.0%
! TTTTTGTAAGACCTAGTAGA+TGG - chr2.3:1799540-1799559 MS.gene86346:CDS 30.0%
!! AAGAAAAACATTAGTTCTGC+TGG + chr2.3:1798431-1798450 None:intergenic 30.0%
!! ACATATTAGTTTGTTTGTGG+TGG - chr2.3:1797339-1797358 MS.gene86346:CDS 30.0%
!! AGAATTTTAATATTGCGACG+TGG - chr2.3:1796430-1796449 MS.gene86346:intron 30.0%
!! CTGACATATTAGTTTGTTTG+TGG - chr2.3:1797336-1797355 MS.gene86346:CDS 30.0%
!! GAACTTTAAAACACCTTTCA+AGG - chr2.3:1796204-1796223 MS.gene86346:intron 30.0%
!! GAATTCAAATGCTGTTTCTT+TGG - chr2.3:1800452-1800471 MS.gene86346:intron 30.0%
!! GAATTTTAATATTGCGACGT+GGG - chr2.3:1796431-1796450 MS.gene86346:intron 30.0%
!! GGGTATTGTAGATGATTTTA+GGG - chr2.3:1796225-1796244 MS.gene86346:intron 30.0%
!! GTGTATTTCTTGGTTTGTTT+CGG - chr2.3:1799783-1799802 MS.gene86346:intron 30.0%
!!! AGGGTATTGTAGATGATTTT+AGG - chr2.3:1796224-1796243 MS.gene86346:intron 30.0%
AAAATTAAGCTCAGGATACC+TGG + chr2.3:1799983-1800002 None:intergenic 35.0%
AATCTGCATCATTACATCAC+TGG - chr2.3:1798004-1798023 MS.gene86346:intron 35.0%
AATTTCTACTGCAGGATATG+GGG - chr2.3:1798172-1798191 MS.gene86346:intron 35.0%
ACATGTAATAGAAGCTTACC+CGG + chr2.3:1796302-1796321 None:intergenic 35.0%
ACATTGCATGTTCTACATCA+CGG + chr2.3:1796517-1796536 None:intergenic 35.0%
ACCATGTAACATGTGATCAT+AGG + chr2.3:1798768-1798787 None:intergenic 35.0%
ACTGACATAATTTCTACTGC+AGG - chr2.3:1798164-1798183 MS.gene86346:intron 35.0%
ACTTACTTGTACCATCTACT+AGG + chr2.3:1799554-1799573 None:intergenic 35.0%
AGAAGTTTCATTGCAGACTA+CGG - chr2.3:1797877-1797896 MS.gene86346:intron 35.0%
ATACCAACTTCAGTATTGTG+GGG - chr2.3:1799452-1799471 MS.gene86346:CDS 35.0%
ATCACCTAAAGTTGGATCAA+AGG - chr2.3:1800328-1800347 MS.gene86346:intron 35.0%
ATCAGCAAAAAGAATGGCAA+AGG + chr2.3:1799843-1799862 None:intergenic 35.0%
CTCCTTTATCTTCACCATTT+AGG + chr2.3:1799292-1799311 None:intergenic 35.0%
CTTACTTTCATAAGCTCTCA+AGG - chr2.3:1798738-1798757 MS.gene86346:CDS 35.0%
CTTCCAATGTGTGTATTTCT+TGG - chr2.3:1799773-1799792 MS.gene86346:intron 35.0%
GAATCCAAATCCACTAATGA+TGG + chr2.3:1797650-1797669 None:intergenic 35.0%
GAGTTATGCATAGAGTGTAT+AGG + chr2.3:1796705-1796724 None:intergenic 35.0%
GATACCAACTTCAGTATTGT+GGG - chr2.3:1799451-1799470 MS.gene86346:CDS 35.0%
GATGAGTTAACCACTAATAG+AGG - chr2.3:1800374-1800393 MS.gene86346:intron 35.0%
GCAAGCAGTGTTTATAGAAA+TGG - chr2.3:1799002-1799021 MS.gene86346:intron 35.0%
GCCAAAAATAAGGAAGGTTT+GGG - chr2.3:1796908-1796927 MS.gene86346:CDS 35.0%
GCTGAATATGAAGAAATACC+TGG - chr2.3:1799927-1799946 MS.gene86346:CDS 35.0%
GTCCTAAATGGTGAAGATAA+AGG - chr2.3:1799287-1799306 MS.gene86346:CDS 35.0%
TCAGCAAAAAGAATGGCAAA+GGG + chr2.3:1799842-1799861 None:intergenic 35.0%
TCATCTACAATACCCTTGAA+AGG + chr2.3:1796220-1796239 None:intergenic 35.0%
TGAGTTAACCACTAATAGAG+GGG - chr2.3:1800376-1800395 MS.gene86346:intron 35.0%
TGATACCAACTTCAGTATTG+TGG - chr2.3:1799450-1799469 MS.gene86346:CDS 35.0%
TGCCAAAAATAAGGAAGGTT+TGG - chr2.3:1796907-1796926 MS.gene86346:CDS 35.0%
TTACTAATTGTTCCTGACCA+TGG - chr2.3:1799214-1799233 MS.gene86346:CDS 35.0%
TTCAGTGGTAAAAGAACTAG+AGG - chr2.3:1799250-1799269 MS.gene86346:CDS 35.0%
TTTGGGAAGAGAACTCTATT+TGG - chr2.3:1796925-1796944 MS.gene86346:CDS 35.0%
! AACCAGAATTTTATAGGACG+GGG + chr2.3:1799146-1799165 None:intergenic 35.0%
! AAGAGAACTCTATTTGGCTT+GGG - chr2.3:1796931-1796950 MS.gene86346:CDS 35.0%
! ACTTTGCTTTGTGGACTAAT+TGG - chr2.3:1798467-1798486 MS.gene86346:CDS 35.0%
! AGTTTGAAGTTCCTAAAGAG+GGG - chr2.3:1797455-1797474 MS.gene86346:CDS 35.0%
! ATGATCATGGTTTGAAACTG+CGG - chr2.3:1796388-1796407 MS.gene86346:CDS 35.0%
! CACTCTATGCATAACTCTTT+TGG - chr2.3:1796708-1796727 MS.gene86346:intron 35.0%
! CACTTTTAACCATCTTTCTC+CGG + chr2.3:1798930-1798949 None:intergenic 35.0%
! GAACCAGAATTTTATAGGAC+GGG + chr2.3:1799147-1799166 None:intergenic 35.0%
! GAGTTTGAAGTTCCTAAAGA+GGG - chr2.3:1797454-1797473 MS.gene86346:CDS 35.0%
! GGAATCATACACTCCATTTT+TGG - chr2.3:1796815-1796834 MS.gene86346:CDS 35.0%
! GTAGCAAATAAAGTACCTTC+TGG - chr2.3:1797946-1797965 MS.gene86346:intron 35.0%
! TCTAGTTCCATAAGATGGTT+TGG + chr2.3:1799903-1799922 None:intergenic 35.0%
! TCTTCCAGGGAATCAATTTT+GGG - chr2.3:1799502-1799521 MS.gene86346:CDS 35.0%
! TCTTTTTGCTGATCACATTG+AGG - chr2.3:1799850-1799869 MS.gene86346:CDS 35.0%
! TGAGTTTGAAGTTCCTAAAG+AGG - chr2.3:1797453-1797472 MS.gene86346:CDS 35.0%
!! AAAGATGGTTAAAAGTGCCA+AGG - chr2.3:1798933-1798952 MS.gene86346:intron 35.0%
!! ATCATACACTCCATTTTTGG+TGG - chr2.3:1796818-1796837 MS.gene86346:CDS 35.0%
!! CATTGATTTCTGTTTCTTGC+AGG - chr2.3:1799682-1799701 MS.gene86346:intron 35.0%
!! GCTAGCAACTCTGAAATATA+TGG - chr2.3:1798973-1798992 MS.gene86346:intron 35.0%
!! GTTGGTATCATTTTTATGGC+AGG + chr2.3:1799440-1799459 None:intergenic 35.0%
!! TATCATTTTTATGGCAGGCA+TGG + chr2.3:1799435-1799454 None:intergenic 35.0%
!! TTGTATGCAAATGGATTGCT+AGG - chr2.3:1797511-1797530 MS.gene86346:intron 35.0%
!!! TCCCAAACCTTCCTTATTTT+TGG + chr2.3:1796912-1796931 None:intergenic 35.0%
AAAAGGATGAGAGGATCAGA+AGG + chr2.3:1799053-1799072 None:intergenic 40.0%
AACATTTCAGGGTTTGTGTG+TGG - chr2.3:1797179-1797198 MS.gene86346:intron 40.0%
AACGTGCGATCTCGATTTAA+TGG + chr2.3:1800073-1800092 None:intergenic 40.0%
AAGAAGACTCATTGCACCTT+TGG - chr2.3:1797975-1797994 MS.gene86346:intron 40.0%
AAGAGGTTGTCCACCAAAAA+TGG + chr2.3:1796831-1796850 None:intergenic 40.0%
ACAGGTTTGTCGAGAAAACT+CGG - chr2.3:1797604-1797623 MS.gene86346:intron 40.0%
ACATCACTGGACAGTAATCA+AGG - chr2.3:1798017-1798036 MS.gene86346:intron 40.0%
ACCTCTTCTAATACTAGGAG+TGG - chr2.3:1796844-1796863 MS.gene86346:CDS 40.0%
AGAGCAAGGTCATGCTTATA+TGG - chr2.3:1797580-1797599 MS.gene86346:intron 40.0%
AGGTCATGCTTATATGGAAC+AGG - chr2.3:1797586-1797605 MS.gene86346:intron 40.0%
ATGTCATAGTGATATGCCGA+AGG + chr2.3:1798321-1798340 None:intergenic 40.0%
ATTTGGATTCAGCCACATCT+CGG - chr2.3:1797660-1797679 MS.gene86346:intron 40.0%
CAATCATTAGCATGGTTGGA+TGG - chr2.3:1797815-1797834 MS.gene86346:CDS 40.0%
CATCCAACCATGCTAATGAT+TGG + chr2.3:1797817-1797836 None:intergenic 40.0%
CTTTGCTCCTTTACTCTTAC+AGG + chr2.3:1799365-1799384 None:intergenic 40.0%
GAAGAGAACTCTATTTGGCT+TGG - chr2.3:1796930-1796949 MS.gene86346:CDS 40.0%
GAGGTTGAATCACCTAAAGT+TGG - chr2.3:1800320-1800339 MS.gene86346:intron 40.0%
GCCTATGATCACATGTTACA+TGG - chr2.3:1798764-1798783 MS.gene86346:CDS 40.0%
GGACAACCTCTTCTAATACT+AGG - chr2.3:1796839-1796858 MS.gene86346:CDS 40.0%
GGAGTGTATGATTCCACAAA+TGG + chr2.3:1796810-1796829 None:intergenic 40.0%
GGGTAAGCTTCTATTACATG+TGG - chr2.3:1796301-1796320 MS.gene86346:intron 40.0%
GTAAAGCCCTGCTATCATTA+AGG + chr2.3:1798238-1798257 None:intergenic 40.0%
GTCAGTAACTTCCAAAACCA+TGG + chr2.3:1798150-1798169 None:intergenic 40.0%
GTTCAGTCCAAACCATCTTA+TGG - chr2.3:1799893-1799912 MS.gene86346:CDS 40.0%
TATCCCCACAATACTGAAGT+TGG + chr2.3:1799458-1799477 None:intergenic 40.0%
TGAATGATTCTGCAGAACCA+TGG + chr2.3:1799234-1799253 None:intergenic 40.0%
TGTTTGTTTATTGAGCAGGG+TGG - chr2.3:1797851-1797870 MS.gene86346:intron 40.0%
TTCCAAAACCATGGCATGTT+TGG + chr2.3:1798141-1798160 None:intergenic 40.0%
TTCCAGCCTTAATGATAGCA+GGG - chr2.3:1798229-1798248 MS.gene86346:CDS 40.0%
TTGTGTATCCAAACATGCCA+TGG - chr2.3:1798130-1798149 MS.gene86346:intron 40.0%
TTTCTTCCCTATGCTTTCCT+TGG + chr2.3:1798953-1798972 None:intergenic 40.0%
! AAAGGTGCAATGAGTCTTCT+TGG + chr2.3:1797976-1797995 None:intergenic 40.0%
! AAAGTGCCAAGGAAAGCATA+GGG - chr2.3:1798944-1798963 MS.gene86346:intron 40.0%
! AACCATGCTAATGATTGGTC+CGG + chr2.3:1797812-1797831 None:intergenic 40.0%
! AGAAGGTGTAGGCTTACATT+AGG + chr2.3:1799036-1799055 None:intergenic 40.0%
! ATCCAAACATGCCATGGTTT+TGG - chr2.3:1798136-1798155 MS.gene86346:intron 40.0%
! ATGGCTATTGATAGTCTTCC+AGG - chr2.3:1799488-1799507 MS.gene86346:CDS 40.0%
! CTGCATCTAGTTCCATAAGA+TGG + chr2.3:1799908-1799927 None:intergenic 40.0%
! CTTTCCCAAAATTGATTCCC+TGG + chr2.3:1799509-1799528 None:intergenic 40.0%
! CTTTGAAAAGCAGAAGAGCA+AGG - chr2.3:1797566-1797585 MS.gene86346:intron 40.0%
! GAAAACTCGGTGATTACTTG+AGG - chr2.3:1797617-1797636 MS.gene86346:intron 40.0%
! GTCAGAGTGAAAGAGCATAA+TGG + chr2.3:1796683-1796702 None:intergenic 40.0%
! GTCTTCCAGGGAATCAATTT+TGG - chr2.3:1799501-1799520 MS.gene86346:CDS 40.0%
! GTTTGAAGTTCCTAAAGAGG+GGG - chr2.3:1797456-1797475 MS.gene86346:CDS 40.0%
! TGGCTATTGATAGTCTTCCA+GGG - chr2.3:1799489-1799508 MS.gene86346:CDS 40.0%
! TTCTGTTTCTTGCAGGTTGT+TGG - chr2.3:1799689-1799708 MS.gene86346:intron 40.0%
!! AAAAGTGCCAAGGAAAGCAT+AGG - chr2.3:1798943-1798962 MS.gene86346:intron 40.0%
!! ATTCCTTTTGTTGTGCCAGT+TGG + chr2.3:1798284-1798303 None:intergenic 40.0%
!! ATTGGTTTGCCTCCTTCAAA+TGG - chr2.3:1798485-1798504 MS.gene86346:CDS 40.0%
!! CAGAACTACTAGCTTTAGTG+AGG - chr2.3:1800409-1800428 MS.gene86346:intron 40.0%
!! CAGGGAATCAATTTTGGGAA+AGG - chr2.3:1799507-1799526 MS.gene86346:CDS 40.0%
!! GAATGGTACTGACTCAACAA+AGG + chr2.3:1799730-1799749 None:intergenic 40.0%
!! TGAGCCATCATTAGTGGATT+TGG - chr2.3:1797643-1797662 MS.gene86346:intron 40.0%
!! TGTTGACTTCATGAATGCGT+GGG - chr2.3:1800188-1800207 MS.gene86346:intron 40.0%
!! TTCCTTTTGTTGTGCCAGTT+GGG + chr2.3:1798283-1798302 None:intergenic 40.0%
!!! GGTTTTAAGGGTCTCTACAA+CGG + chr2.3:1796463-1796482 None:intergenic 40.0%
AATGTTGGATCCCCCTCTTT+AGG + chr2.3:1797469-1797488 None:intergenic 45.0%
ACTTCATGAATGCGTGGGAT+TGG - chr2.3:1800193-1800212 MS.gene86346:intron 45.0%
AGTCTTCTTGGAACTCCAGA+AGG + chr2.3:1797964-1797983 None:intergenic 45.0%
CACTAATAGAGGGGAGTTGA+AGG - chr2.3:1800385-1800404 MS.gene86346:intron 45.0%
CAGACTCTTAGTGTGCATAG+GGG + chr2.3:1798525-1798544 None:intergenic 45.0%
CCAGACTCTTAGTGTGCATA+GGG + chr2.3:1798526-1798545 None:intergenic 45.0%
CCTTTGAACGGTAGTTGATC+CGG - chr2.3:1798908-1798927 MS.gene86346:intron 45.0%
CTTCAACTCCCCTCTATTAG+TGG + chr2.3:1800387-1800406 None:intergenic 45.0%
CTTCATGAATGCGTGGGATT+GGG - chr2.3:1800194-1800213 MS.gene86346:intron 45.0%
GCCACTCCTAGTATTAGAAG+AGG + chr2.3:1796848-1796867 None:intergenic 45.0%
GCTCTACCTGTTATTGCCTT+CGG - chr2.3:1796602-1796621 MS.gene86346:intron 45.0%
GGACCAATCATTAGCATGGT+TGG - chr2.3:1797811-1797830 MS.gene86346:CDS 45.0%
GGGAACAACATTCCAGCAAT+TGG + chr2.3:1799822-1799841 None:intergenic 45.0%
GGTTCTGCAGAATCATTCAG+TGG - chr2.3:1799235-1799254 MS.gene86346:CDS 45.0%
GTAGTTGATCCGGAGAAAGA+TGG - chr2.3:1798918-1798937 MS.gene86346:intron 45.0%
GTGACATGGATTCCAATTGC+TGG - chr2.3:1799807-1799826 MS.gene86346:CDS 45.0%
GTGGGGATACTTTGCTTACA+TGG - chr2.3:1799469-1799488 MS.gene86346:CDS 45.0%
GTTAATCCAAACAGGGGCTT+GGG + chr2.3:1796988-1797007 None:intergenic 45.0%
GTTCCAGCCTTAATGATAGC+AGG - chr2.3:1798228-1798247 MS.gene86346:CDS 45.0%
GTTTCTTGCAGGTTGTTGGA+AGG - chr2.3:1799693-1799712 MS.gene86346:intron 45.0%
TAAAGAGGGGGATCCAACAT+TGG - chr2.3:1797468-1797487 MS.gene86346:CDS 45.0%
TCATTAGCATGGTTGGATGG+AGG - chr2.3:1797818-1797837 MS.gene86346:CDS 45.0%
TCTGGCTGTTCTCAAGAAAC+AGG - chr2.3:1798541-1798560 MS.gene86346:CDS 45.0%
TGAGGCAGAACTCCATTTGA+AGG + chr2.3:1798500-1798519 None:intergenic 45.0%
TGCCCCGTCCTATAAAATTC+TGG - chr2.3:1799141-1799160 MS.gene86346:intron 45.0%
TGTTAATCCAAACAGGGGCT+TGG + chr2.3:1796989-1797008 None:intergenic 45.0%
TTAAGCTCAGGATACCTGGA+AGG + chr2.3:1799979-1799998 None:intergenic 45.0%
TTAGTGTGCATAGGGGATTG+AGG + chr2.3:1798518-1798537 None:intergenic 45.0%
TTGATCCGACAGTCCAAATG+TGG - chr2.3:1797747-1797766 MS.gene86346:CDS 45.0%
TTGGACTGTCGGATCAAGAT+CGG + chr2.3:1797744-1797763 None:intergenic 45.0%
! ACCATGCTAATGATTGGTCC+GGG + chr2.3:1797811-1797830 None:intergenic 45.0%
! ACTCATTGCACCTTTGGCTT+GGG - chr2.3:1797981-1798000 MS.gene86346:intron 45.0%
! AGACTACGGAGTACCATTCT+TGG - chr2.3:1797891-1797910 MS.gene86346:intron 45.0%
! AGATGGAAGCTTAAGCACTG+TGG - chr2.3:1796766-1796785 MS.gene86346:intron 45.0%
! AGGATTGCTGGTGAGCTTTT+TGG - chr2.3:1797265-1797284 MS.gene86346:CDS 45.0%
! ATGAGAGGATCAGAAGGTGT+AGG + chr2.3:1799047-1799066 None:intergenic 45.0%
! ATGGTTTGGACTGAACAGCT+TGG + chr2.3:1799889-1799908 None:intergenic 45.0%
! CTTAAGCACTGTGGAAACAC+TGG - chr2.3:1796775-1796794 MS.gene86346:intron 45.0%
! TGGTTTGGACTGAACAGCTT+GGG + chr2.3:1799888-1799907 None:intergenic 45.0%
!! AAACTTAGTCTTGGAGCACC+AGG + chr2.3:1799948-1799967 None:intergenic 45.0%
!! AGGCTTTGAGCCATCATTAG+TGG - chr2.3:1797637-1797656 MS.gene86346:intron 45.0%
!! CGGCAGTCTACAGGTTTTAA+GGG + chr2.3:1796475-1796494 None:intergenic 45.0%
!! GAACTCTATTTGGCTTGGGT+AGG - chr2.3:1796935-1796954 MS.gene86346:CDS 45.0%
!! GTGTTGACTTCATGAATGCG+TGG - chr2.3:1800187-1800206 MS.gene86346:intron 45.0%
!! TCTATTTGGCTTGGGTAGGA+TGG - chr2.3:1796939-1796958 MS.gene86346:CDS 45.0%
!! TGGTTTGTTTCGGAGTGACA+TGG - chr2.3:1799793-1799812 MS.gene86346:intron 45.0%
!! TTGGATTTCTGGTCTCACCT+CGG - chr2.3:1796273-1796292 MS.gene86346:intron 45.0%
AAATCGAGATCGCACGTTGC+AGG - chr2.3:1800075-1800094 MS.gene86346:intron 50.0%
AACAGGGGCTTGGGTTATGT+AGG + chr2.3:1796979-1796998 None:intergenic 50.0%
AATCTGGACAGTCCGAGATG+TGG + chr2.3:1797675-1797694 None:intergenic 50.0%
ACATAACCCAAGCCCCTGTT+TGG - chr2.3:1796979-1796998 MS.gene86346:CDS 50.0%
ACCCGGACCAATCATTAGCA+TGG - chr2.3:1797807-1797826 MS.gene86346:CDS 50.0%
ACCTCATGACTGCACACAGT+TGG + chr2.3:1797773-1797792 None:intergenic 50.0%
ACGGTCTGCAATTGCAGTTG+TGG + chr2.3:1796498-1796517 None:intergenic 50.0%
AGACGTGTGAATGTCGTGTC+CGG + chr2.3:1799641-1799660 None:intergenic 50.0%
AGCCCTGCTATCATTAAGGC+TGG + chr2.3:1798234-1798253 None:intergenic 50.0%
CCCTATGCACACTAAGAGTC+TGG - chr2.3:1798523-1798542 MS.gene86346:CDS 50.0%
CCGGATCAACTACCGTTCAA+AGG + chr2.3:1798911-1798930 None:intergenic 50.0%
CGCTCACGCAATCAACACAT+TGG - chr2.3:1800044-1800063 MS.gene86346:intron 50.0%
CTGGCTTCTACAGCCATTTG+TGG - chr2.3:1796794-1796813 MS.gene86346:CDS 50.0%
GACTCATTGCACCTTTGGCT+TGG - chr2.3:1797980-1797999 MS.gene86346:intron 50.0%
GAGCGTGAAATCACGACTGT+GGG + chr2.3:1800029-1800048 None:intergenic 50.0%
GATGCAGATTCCCAAGCCAA+AGG + chr2.3:1797994-1798013 None:intergenic 50.0%
GATTCTGCAGAACCATGGTC+AGG + chr2.3:1799229-1799248 None:intergenic 50.0%
GCCAGACTCTTAGTGTGCAT+AGG + chr2.3:1798527-1798546 None:intergenic 50.0%
GGATATGGGGAAGGTTTCTC+TGG - chr2.3:1798185-1798204 MS.gene86346:intron 50.0%
GGCAGAACTCCATTTGAAGG+AGG + chr2.3:1798497-1798516 None:intergenic 50.0%
GGTAGTCCTTGGATCGAGTT+CGG + chr2.3:1800164-1800183 None:intergenic 50.0%
GGTTTGGACTGAACAGCTTG+GGG + chr2.3:1799887-1799906 None:intergenic 50.0%
GTCCCAACTGGCACAACAAA+AGG - chr2.3:1798278-1798297 MS.gene86346:CDS 50.0%
GTCTGCAATTGCAGTTGTGG+CGG + chr2.3:1796495-1796514 None:intergenic 50.0%
GTTGGCCACATTTGGACTGT+CGG + chr2.3:1797755-1797774 None:intergenic 50.0%
TACCATTCTTGGTCGTGGTG+TGG - chr2.3:1797902-1797921 MS.gene86346:intron 50.0%
TCTACTGCAGGATATGGGGA+AGG - chr2.3:1798176-1798195 MS.gene86346:intron 50.0%
TGAGCGTGAAATCACGACTG+TGG + chr2.3:1800030-1800049 None:intergenic 50.0%
TGCACACAGTTGGCCACATT+TGG + chr2.3:1797763-1797782 None:intergenic 50.0%
! CATGGTTTGAAACTGCGGTG+CGG - chr2.3:1796393-1796412 MS.gene86346:CDS 50.0%
! GCGGCAGTCTACAGGTTTTA+AGG + chr2.3:1796476-1796495 None:intergenic 50.0%
!! TGGATTTCTGGTCTCACCTC+GGG - chr2.3:1796274-1796293 MS.gene86346:intron 50.0%
!! TGGTTCTGAACCTGCTGACA+CGG - chr2.3:1799161-1799180 MS.gene86346:CDS 50.0%
AGCTCAGTAGGGACACAGGT+TGG - chr2.3:1796630-1796649 MS.gene86346:intron 55.0%
GCCAACTGTGTGCAGTCATG+AGG - chr2.3:1797769-1797788 MS.gene86346:CDS 55.0%
GGACGGTGTAGAAAGCAAGC+AGG + chr2.3:1800143-1800162 None:intergenic 55.0%
GGTTGTGACTGCACACAACC+CGG - chr2.3:1797790-1797809 MS.gene86346:CDS 55.0%
GTCCACACCACGACCAAGAA+TGG + chr2.3:1797907-1797926 None:intergenic 55.0%
GTCCTTGGATCGAGTTCGGA+CGG + chr2.3:1800160-1800179 None:intergenic 55.0%
TGTTTGACGTCCGTGTCAGC+AGG + chr2.3:1799174-1799193 None:intergenic 55.0%
! CGGAGTACCATTCTTGGTCG+TGG - chr2.3:1797897-1797916 MS.gene86346:intron 55.0%
AGAAGCTTACCCGGTTCCCG+AGG + chr2.3:1796293-1796312 None:intergenic 60.0%
CACCGTCCGAACTCGATCCA+AGG - chr2.3:1800155-1800174 MS.gene86346:CDS 60.0%
CAGTTGTGGCGGCAGTCTAC+AGG + chr2.3:1796484-1796503 None:intergenic 60.0%
CCAGTTGGGACGCAACGCTA+TGG + chr2.3:1798269-1798288 None:intergenic 60.0%
CCATAGCGTTGCGTCCCAAC+TGG - chr2.3:1798266-1798285 MS.gene86346:CDS 60.0%
TCTGGTCTCACCTCGGGAAC+CGG - chr2.3:1796280-1796299 MS.gene86346:intron 60.0%
TGCGCGCCGAAGGCAATAAC+AGG + chr2.3:1796611-1796630 None:intergenic 60.0%
CTGGTCTCACCTCGGGAACC+GGG - chr2.3:1796281-1796300 MS.gene86346:intron 65.0%
CTTCGGCGCGCAGCTCAGTA+GGG - chr2.3:1796619-1796638 MS.gene86346:intron 65.0%
GCGCAGCTCAGTAGGGACAC+AGG - chr2.3:1796626-1796645 MS.gene86346:intron 65.0%
CCTACTGAGCTGCGCGCCGA+AGG + chr2.3:1796621-1796640 None:intergenic 70.0%
CCTTCGGCGCGCAGCTCAGT+AGG - chr2.3:1796618-1796637 MS.gene86346:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 1796187 1800577 1796187 ID=MS.gene86346
chr2.3 mRNA 1796187 1800577 1796187 ID=MS.gene86346.t1;Parent=MS.gene86346
chr2.3 exon 1800462 1800577 1800462 ID=MS.gene86346.t1.exon1;Parent=MS.gene86346.t1
chr2.3 CDS 1800462 1800577 1800462 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1800117 1800199 1800117 ID=MS.gene86346.t1.exon2;Parent=MS.gene86346.t1
chr2.3 CDS 1800117 1800199 1800117 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1799804 1799996 1799804 ID=MS.gene86346.t1.exon3;Parent=MS.gene86346.t1
chr2.3 CDS 1799804 1799996 1799804 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1799437 1799575 1799437 ID=MS.gene86346.t1.exon4;Parent=MS.gene86346.t1
chr2.3 CDS 1799437 1799575 1799437 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1799157 1799322 1799157 ID=MS.gene86346.t1.exon5;Parent=MS.gene86346.t1
chr2.3 CDS 1799157 1799322 1799157 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1798726 1798895 1798726 ID=MS.gene86346.t1.exon6;Parent=MS.gene86346.t1
chr2.3 CDS 1798726 1798895 1798726 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1798405 1798578 1798405 ID=MS.gene86346.t1.exon7;Parent=MS.gene86346.t1
chr2.3 CDS 1798405 1798578 1798405 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1798202 1798297 1798202 ID=MS.gene86346.t1.exon8;Parent=MS.gene86346.t1
chr2.3 CDS 1798202 1798297 1798202 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1797726 1797842 1797726 ID=MS.gene86346.t1.exon9;Parent=MS.gene86346.t1
chr2.3 CDS 1797726 1797842 1797726 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1797197 1797519 1797197 ID=MS.gene86346.t1.exon10;Parent=MS.gene86346.t1
chr2.3 CDS 1797197 1797519 1797197 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1796781 1797060 1796781 ID=MS.gene86346.t1.exon11;Parent=MS.gene86346.t1
chr2.3 CDS 1796781 1797060 1796781 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1796319 1796444 1796319 ID=MS.gene86346.t1.exon12;Parent=MS.gene86346.t1
chr2.3 CDS 1796319 1796444 1796319 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
chr2.3 exon 1796187 1796216 1796187 ID=MS.gene86346.t1.exon13;Parent=MS.gene86346.t1
chr2.3 CDS 1796187 1796216 1796187 ID=cds.MS.gene86346.t1;Parent=MS.gene86346.t1
Gene Sequence

>MS.gene86346

ATGAATGCAGATATGAAGAACTTTAAAACACCTTTCAAGGGTATTGTAGATGATTTTAGGGGAAGAGCAGTACACTATAAAGATGATTGGATTTCTGGTCTCACCTCGGGAACCGGGTAAGCTTCTATTACATGTGGATTTATTCATGTTTGTATGTATGTATGTATGTATATATTTTTCACCAAAAAAATTCATGCAAGTATGATCATGGTTTGAAACTGCGGTGCGGTTGCAGTTACGTTGAGAATTTTAATATTGCGACGTGGGCAAATGCCGTTGTAGAGACCCTTAAAACCTGTAGACTGCCGCCACAACTGCAATTGCAGACCGTGATGTAGAACATGCAATGTAACGATAATAATACTAATGTAATGACAGGATATTGGCACCGACTATGTATATTTTCTTCGCTTCTGCTCTACCTGTTATTGCCTTCGGCGCGCAGCTCAGTAGGGACACAGGTTGGTTCATGATCTTCTTCACTCTTTCTTGACCATTATGCTCTTTCACTCTGACCTATACACTCTATGCATAACTCTTTTGGTATTAAGATTGAACCATTTCTTGTTTGTATTTTGTAGATGGAAGCTTAAGCACTGTGGAAACACTGGCTTCTACAGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTTCTAATACTAGGAGTGGCAGAACCCACTATCCTTATGTACACATATTTGTACAATTATGCCAAAAATAAGGAAGGTTTGGGAAGAGAACTCTATTTGGCTTGGGTAGGATGGTAAGAATAACATATCCTACATAACCCAAGCCCCTGTTTGGATTAACATATATGCTATTTCTGTAGCAAAAGATAAAATAAAGTCAAATTATGTTCATATAATTAGCTATAAGTTGTTTTCATAAGCTCTCCCAAGTGCATATGTTAGATAAACTCAATTAAGTCAATCAAAACAGGCTTGAAGATCATGTTTTAATCATTGTCTAATGGATGTTATTAACATTTCAGGGTTTGTGTGTGGACTGCTCTATTGCTATTTCTTTTAGCAATATTCAATGCTGCCATTATCATCAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGCATGTTGATTACAGTCTTATTCATTCAAGAAGCTATCAAGGTTAGTTTCTGACATATTAGTTTGTTTGTGGTGGTATCAACTATCAAATGAAACATGAATTTGGCATAACACATAAGAAAAAGACTTTGATATATTATTGTATTGAATCTTTAGGGAATGGTAAGTGAGTTTGAAGTTCCTAAAGAGGGGGATCCAACATTGGATAAATACCAATTTCATTGGTTGTATGCAAATGGATTGCTAGGAATTATATTTACATTTGGCCTTCTCTATACTTCTTTGAAAAGCAGAAGAGCAAGGTCATGCTTATATGGAACAGGTTTGTCGAGAAAACTCGGTGATTACTTGAGGCTTTGAGCCATCATTAGTGGATTTGGATTCAGCCACATCTCGGACTGTCCAGATTTTAATTTCTTTTAAATTTAAAATATCAAACTTGAAGTATCGACTGTCCGATCTTGATCCGACAGTCCAAATGTGGCCAACTGTGTGCAGTCATGAGGTTGTGACTGCACACAACCCGGACCAATCATTAGCATGGTTGGATGGAGGAAACTGACATTGTTTGTTTATTGAGCAGGGTGGTTAAGAAGTTTCATTGCAGACTACGGAGTACCATTCTTGGTCGTGGTGTGGACAGCTTTATCATTTACACTAGTAGCAAATAAAGTACCTTCTGGAGTTCCAAGAAGACTCATTGCACCTTTGGCTTGGGAATCTGCATCATTACATCACTGGACAGTAATCAAGGTAAAACAACTTATAGCATATTGAAAACCATTGGACTTTGTTATATATCTTTTGTTTGATAAATATCTTACACATAAGCACTTTAATTAAGTTGTGTATCCAAACATGCCATGGTTTTGGAAGTTACTGACATAATTTCTACTGCAGGATATGGGGAAGGTTTCTCTGGAACATATTTTTGCTGCTTTTGTTCCAGCCTTAATGATAGCAGGGCTTTACTTCTTTGACCATAGCGTTGCGTCCCAACTGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCGGCATATCACTATGACATATTGTTACTAGGATTCATGGTATATATTTATATTTTATATATAATATCTTGTATGGAGTTGTTTAATTGTCACTCACATTAATGATACCAGCAGAACTAATGTTTTTCTTTGAATCAAACATTTAGACTTTGCTTTGTGGACTAATTGGTTTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACTAAGAGTCTGGCTGTTCTCAAGAAACAGGTGTGTAAATGAGTATTGATAATTGTAATTTTGTATTCAGTAGCAAGATTGAATTTGATATTAGGGGTTTGTTTGGATTGACTTATTTGAGCTTATATATTGGTATAAGCATTTGTGAGACAGTTTGAGAGAGATTATGAAAACAAATTATGACATACAAATAAGCTGTTTTCTGCTTACTTTCATAAGCTCTCAAGGATAGCCTATGATCACATGTTACATGGTATTTGAAAATAATTTGACTTTCTTTTTTTTATAGATAAAATTTATATGATAAGTGATTATGCTATAAACTCTTAATTAAGTTGTTTATATACACAAAGCCTGAATATGGTGATTCATTTTCCTTTGAACGGTAGTTGATCCGGAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAGGGAAGAAAGCTAGCAACTCTGAAATATATGGAACGATGCAAGCAGTGTTTATAGAAATGGATAATGATCCTAATGTAAGCCTACACCTTCTGATCCTCTCATCCTTTTGCTAATAAATATATTCGGCAATTGTTATATATGTTTTTTATTATTAATTCATATTATATTTTGATCTTTGCCCCGTCCTATAAAATTCTGGTTCTGAACCTGCTGACACGGACGTCAAACACGACACGAATAATAACTAAATTACTAATTGTTCCTGACCATGGTTCTGCAGAATCATTCAGTGGTAAAAGAACTAGAGGATTTGAAAGATTTTGTCCTAAATGGTGAAGATAAAGGAGAGAACAATAAGAGCACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAAGGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTTGGAGCAGCAGTGTTTGCCATGCCTGCCATAAAAATGATACCAACTTCAGTATTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGGAATCAATTTTGGGAAAGGATACTGCTTCTTTTTGTAAGACCTAGTAGATGGTACAAGTAAGTGAAAGTTACTTTGATTTCACCATTTTAACAAAATATACATGAAGCATTGAAATAAACACTAACACCGGACACGACATTCACACGTCTTTATTCTGAAGTGTCAGTTGTCATTGATTTCTGTTTCTTGCAGGTTGTTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCATTCAAACATATAGTATTGTTTACACTCTTCCAATGTGTGTATTTCTTGGTTTGTTTCGGAGTGACATGGATTCCAATTGCTGGAATGTTGTTCCCTTTGCCATTCTTTTTGCTGATCACATTGAGGCAATATATACTCCCCAAGCTGTTCAGTCCAAACCATCTTATGGAACTAGATGCAGCTGAATATGAAGAAATACCTGGTGCTCCAAGACTAAGTTTCAATATATCCTTCCAGGTATCCTGAGCTTAATTTTGTCATTTTTTTTTATTTGCATTGCCCACAGTCGTGATTTCACGCTCACGCAATCAACACATTGGTAGCCATTAAATCGAGATCGCACGTTGCAGGTTTCAAGCTCGATATTTTAGAGTAAAAAAAAAAAAATCAAAACCTGCTTGCTTTCTACACCGTCCGAACTCGATCCAAGGACTACCAATGTGTTGACTTCATGAATGCGTGGGATTGGGATTGCATGCAAACCAAAGCCTTTTCAATTATGATATTTCATCTCAATTATATTTTACACAATACTCTAGGATATCAAAGAGTTCTATACTTTTTTTGTAACAGGAGGTTGAATCACCTAAAGTTGGATCAAAGGAAATAGGTAATTCTGAAATTTTAGATGAGTTAACCACTAATAGAGGGGAGTTGAAGGTCAGAACTACTAGCTTTAGTGAGGAAAGAAATAATCAGGTAACAGAATTCAAATGCTGTTTCTTTGGATGAATTTGAGTTAATTACTTTTGTTCTTTCTCTAAAAAAAAATGCATTGTTTTCAATGATGAGTTTTTGCAGGTTTATCCTCATGAAATTGATTCAAACTAG
Protein sequence

>MS.gene86346.t1

MNADMKNFKTPFKGIVDDFRGRAVHYKDDWISGLTSGTGILAPTMYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTILMYTYLYNYAKNKEGLGRELYLAWVGWVCVWTALLLFLLAIFNAAIIINRFTRIAGELFGMLITVLFIQEAIKGMVSEFEVPKEGDPTLDKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSCLYGTGWLRSFIADYGVPFLVVVWTALSFTLVANKVPSGVPRRLIAPLAWESASLHHWTVIKDMGKVSLEHIFAAFVPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIGKKASNSEIYGTMQAVFIEMDNDPNNHSVVKELEDLKDFVLNGEDKGENNKSTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGAAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGDHASFVESVPFKHIVLFTLFQCVYFLVCFGVTWIPIAGMLFPLPFFLLITLRQYILPKLFSPNHLMELDAAEYEEIPGAPRLSFNISFQEVESPKVGSKEIGNSEILDELTTNRGELKVRTTSFSEERNNQVYPHEIDSN