AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015611

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015611.t1 MTR_8g106150 98.696 997 13 0 1 997 7 1003 0.0 2053
MS.gene015611.t1 MTR_8g106150 98.537 752 11 0 246 997 9 760 0.0 1546
MS.gene015611.t1 MTR_5g097410 53.571 980 399 14 35 988 263 1212 0.0 995
MS.gene015611.t1 MTR_8g080770 52.261 995 398 17 23 988 21 967 0.0 989
MS.gene015611.t1 MTR_3g085130 51.908 996 413 16 19 990 80 1033 0.0 977
MS.gene015611.t1 MTR_8g080770 52.987 904 353 15 110 988 2 858 0.0 904
MS.gene015611.t1 MTR_3g085130 52.076 843 359 14 156 990 18 823 0.0 835
MS.gene015611.t1 MTR_2g067240 78.065 310 8 2 184 493 1 250 1.05e-161 475
MS.gene015611.t1 MTR_5g044100 56.287 167 46 2 759 925 83 222 2.19e-47 169
MS.gene015611.t1 MTR_1g013360 34.494 316 179 8 380 674 379 687 6.35e-41 164
MS.gene015611.t1 MTR_1g013360 33.566 143 83 3 857 988 870 1011 1.52e-15 82.0
MS.gene015611.t1 MTR_3g105590 36.364 297 170 8 380 674 373 652 6.71e-41 163
MS.gene015611.t1 MTR_3g105590 31.677 161 97 3 841 989 790 949 1.13e-17 89.0
MS.gene015611.t1 MTR_5g022470 33.036 336 191 7 330 664 462 764 2.76e-40 162
MS.gene015611.t1 MTR_5g022470 31.138 167 74 4 852 992 1047 1198 4.42e-15 80.9
MS.gene015611.t1 MTR_5g022470 33.036 336 191 7 330 664 462 764 2.86e-40 162
MS.gene015611.t1 MTR_8g075340 34.416 308 152 5 366 664 460 726 6.93e-40 160
MS.gene015611.t1 MTR_8g075340 32.353 170 73 4 835 976 999 1154 1.06e-16 85.9
MS.gene015611.t1 MTR_4g031150 29.888 358 187 9 371 721 387 687 5.32e-30 128
MS.gene015611.t1 MTR_7g109150 31.148 305 155 4 371 674 338 588 9.80e-28 120
MS.gene015611.t1 MTR_1g087140 26.613 372 221 9 334 689 346 681 1.29e-25 115
MS.gene015611.t1 MTR_1g087140 33.117 154 78 5 840 985 958 1094 1.17e-14 79.3
MS.gene015611.t1 MTR_1g090850 27.446 368 220 13 329 682 328 662 6.37e-24 109
MS.gene015611.t1 MTR_1g090850 38.571 140 62 5 852 984 923 1045 3.98e-16 84.0
MS.gene015611.t1 MTR_1g079790 25.481 208 152 1 356 563 350 554 3.79e-17 86.7
MS.gene015611.t1 MTR_1g079790 25.481 208 152 1 356 563 350 554 4.36e-17 87.0
MS.gene015611.t1 MTR_7g116330 21.038 366 232 3 364 729 362 670 1.36e-14 79.0
MS.gene015611.t1 MTR_7g116330 33.871 124 62 3 854 974 638 744 1.27e-11 69.3
MS.gene015611.t1 MTR_8g063580 44.776 67 37 0 858 924 15 81 5.38e-13 67.8
MS.gene015611.t1 MTR_8g019680 36.937 111 45 4 881 984 54 146 8.17e-12 64.7
MS.gene015611.t1 MTR_1g073840 29.530 149 105 0 356 504 344 492 1.27e-11 69.3
MS.gene015611.t1 MTR_1g073840 31.387 137 74 3 850 985 630 747 2.42e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 89 1057 0.0 1403
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 89 1057 0.0 1403
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 101 1069 0.0 1403
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 89 1057 0.0 1403
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 89 1057 0.0 1403
MS.gene015611.t1 AT2G01830 71.183 989 255 12 19 997 112 1080 0.0 1401
MS.gene015611.t1 AT5G35750 54.328 1005 393 16 10 989 211 1174 0.0 1020
MS.gene015611.t1 AT1G27320 54.088 954 369 15 62 990 121 1030 0.0 980
MS.gene015611.t1 AT2G17820 33.333 345 178 7 330 664 451 753 4.43e-42 168
MS.gene015611.t1 AT5G10720 35.254 295 142 6 380 674 369 614 8.96e-41 163
MS.gene015611.t1 AT5G10720 34.028 144 83 2 856 988 779 921 3.35e-16 84.3
MS.gene015611.t1 AT1G66340 28.112 466 255 11 371 829 337 729 3.48e-35 144
MS.gene015611.t1 AT2G47430 30.793 328 180 11 370 684 388 681 1.25e-30 131
MS.gene015611.t1 AT2G47430 37.063 143 59 5 851 977 982 1109 1.34e-16 85.9
MS.gene015611.t1 AT2G40940 30.952 336 167 7 350 674 306 587 1.40e-27 119
MS.gene015611.t1 AT3G04580 32.026 153 82 5 840 990 631 763 2.47e-13 74.7
MS.gene015611.t1 AT3G04580 32.026 153 82 5 840 990 631 763 2.47e-13 74.7
MS.gene015611.t1 AT4G18130 31.034 145 98 2 382 525 875 1018 2.59e-11 68.6

Find 231 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 4.1:+1204781 None:intergenic
TGAATTCCATTTACCTATAT+TGG 0.177421 4.1:-1203346 MS.gene015611:CDS
TGTCATGAATCTACTGAAAT+AGG 0.183473 4.1:+1203195 None:intergenic
CATGAAAGTAAGCTTGATTT+TGG 0.185418 4.1:-1206532 MS.gene015611:CDS
TCCAATTTGGCGGTGCCTTC+TGG 0.187946 4.1:+1206376 None:intergenic
CAAACATACCCGTCCATTTC+TGG 0.199510 4.1:+1203824 None:intergenic
TGCTGGTCATCAAGCAATTT+TGG 0.203159 4.1:-1206638 MS.gene015611:CDS
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 4.1:-1204086 MS.gene015611:CDS
TGAGAACCCAACAACCTAAA+AGG 0.270552 4.1:+1207099 None:intergenic
TTCTCAAATTAATGTTTCTA+TGG 0.271180 4.1:-1207837 MS.gene015611:CDS
TTGAAGCAACTCGTCGAATT+CGG 0.272691 4.1:-1203425 MS.gene015611:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 4.1:-1207755 MS.gene015611:CDS
CAAAATCAAGCTTACTTTCA+TGG 0.285290 4.1:+1206533 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.295381 4.1:+1206581 None:intergenic
GGCTTTAAGCCCTCTAAAAC+TGG 0.307736 4.1:+1204738 None:intergenic
ACCAGAAGGCACCGCCAAAT+TGG 0.310432 4.1:-1206377 MS.gene015611:CDS
TCATGGCCAATATAGGTAAA+TGG 0.311222 4.1:+1203340 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 4.1:+1205100 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 4.1:-1203424 MS.gene015611:CDS
GGATCTCCCATAACAATATC+TGG 0.330567 4.1:+1205508 None:intergenic
CAGAAGGGTTTCTGTAATAA+TGG 0.331115 4.1:+1207638 None:intergenic
CTGCTGATGAACGCAACAAC+TGG 0.339209 4.1:-1205137 MS.gene015611:CDS
AGCTCGACTTCTAGAAATTA+TGG 0.341838 4.1:-1204937 MS.gene015611:CDS
CTTAAAGCCGTTGTGGTTGA+TGG 0.345003 4.1:-1204724 MS.gene015611:CDS
AATGAACTTTAACAAATATA+TGG 0.345150 4.1:+1205280 None:intergenic
ATCATTTGATGTTTCCTGTA+TGG 0.346790 4.1:+1206505 None:intergenic
TTTGTGATTCTTCTATTAAT+CGG 0.350778 4.1:-1206327 MS.gene015611:CDS
TTCGAAAGGCCGCTACTTAG+TGG 0.361977 4.1:-1207457 MS.gene015611:CDS
GGATATTCAAATGCCAGAAA+TGG 0.363538 4.1:-1203837 MS.gene015611:CDS
AGAGAGGACATCATCGAGTA+TGG 0.366813 4.1:+1205726 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.368418 4.1:+1207022 None:intergenic
TTCCTTTCTCGGCCCAAGAT+AGG 0.368808 4.1:-1204987 MS.gene015611:CDS
TTATGAACAAGTCACCTTGA+TGG 0.371342 4.1:-1205037 MS.gene015611:CDS
AATTTACTTGGTCAACTTGC+TGG 0.372381 4.1:-1206655 MS.gene015611:CDS
TCGTATCATCTACAGCAAAA+TGG 0.372950 4.1:-1207791 MS.gene015611:CDS
TTAATGAGCTCTTCTGTTGT+TGG 0.375076 4.1:+1207021 None:intergenic
TAAGTGCCTAGTTGAACTAA+TGG 0.375538 4.1:-1204887 MS.gene015611:CDS
GTAGAAAGTGCTGTCCAATT+TGG 0.380449 4.1:+1206363 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 4.1:+1204697 None:intergenic
AAGGCATGAAAATCCTATCT+TGG 0.386310 4.1:+1204974 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 4.1:+1205240 None:intergenic
GGGAGCTTAGATTTGTAAAC+AGG 0.386741 4.1:+1207051 None:intergenic
GATCTTCAGTGTGCGCCAAC+TGG 0.387077 4.1:-1204254 MS.gene015611:CDS
GGTTGACACTAACACTGAAT+TGG 0.390644 4.1:+1207695 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.392434 4.1:+1206582 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 4.1:+1203333 None:intergenic
AAAGAGAGGCTTCACCGGTT+AGG 0.399569 4.1:-1207354 MS.gene015611:CDS
AGTCGCAAATGCCATCAATA+AGG 0.400064 4.1:-1204641 MS.gene015611:CDS
AAACATCACCTTCTTCGTAT+TGG 0.401351 4.1:+1206563 None:intergenic
AAAGTTCCAGATATTGTTAT+GGG 0.403106 4.1:-1205514 MS.gene015611:CDS
GAAGCCACTGAGAGCTAGTA+TGG 0.403349 4.1:-1204113 MS.gene015611:CDS
AAGAGAGGCTTCACCGGTTA+GGG 0.409347 4.1:-1207353 MS.gene015611:CDS
TAAAGTTCCAGATATTGTTA+TGG 0.411623 4.1:-1205515 MS.gene015611:CDS
TAAAGATTCTCTTCCTCAAA+AGG 0.411974 4.1:+1203249 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 4.1:-1207735 MS.gene015611:CDS
AACAGAAAGCCCGCAACAAA+TGG 0.414966 4.1:-1205249 MS.gene015611:CDS
GTTTCTATGGATTCTTCTGA+TGG 0.417958 4.1:-1207824 MS.gene015611:CDS
CGAACTGAAGTTGAACCATT+AGG 0.418453 4.1:+1204028 None:intergenic
TGTGTCGAAGACACTGGAAT+TGG 0.420012 4.1:-1205012 MS.gene015611:CDS
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 4.1:+1205239 None:intergenic
TCAGTGTGCGCCAACTGGAC+TGG 0.427277 4.1:-1204249 MS.gene015611:CDS
CAAATTGTAACAAATCTTGT+TGG 0.428971 4.1:-1205472 MS.gene015611:CDS
TGGAATTGGAATTCCTTTCT+CGG 0.432442 4.1:-1204998 MS.gene015611:CDS
TACTAATATTCGTAGCTAGA+AGG 0.432556 4.1:+1204188 None:intergenic
GATATTGTTATGGGAGATCC+TGG 0.437067 4.1:-1205505 MS.gene015611:CDS
GTCTAGACACAAAGGTTTAG+AGG 0.439244 4.1:-1205689 MS.gene015611:intron
CTTCTGTTGTTGGGTTGTGA+GGG 0.443892 4.1:+1207031 None:intergenic
TTACCTAAAATGCCATTCAT+AGG 0.447126 4.1:+1206063 None:intergenic
AATTATGGTGGTACCGGCAT+TGG 0.449454 4.1:-1204922 MS.gene015611:CDS
ATAATGAGAGCTAGAGCTAC+TGG 0.450935 4.1:-1207141 MS.gene015611:CDS
GCAGAATCAGCACCACCCTT+TGG 0.456173 4.1:-1207926 MS.gene015611:CDS
CATTCTGTTTCCAGTCCAGT+TGG 0.457489 4.1:+1204239 None:intergenic
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 4.1:-1207734 MS.gene015611:CDS
TCCAATAACTGAGGTGAAGA+AGG 0.463469 4.1:-1204782 MS.gene015611:CDS
TTCAAAGTTACAAGAGCAAA+CGG 0.464582 4.1:-1207902 MS.gene015611:CDS
AAGAGCAGCTTTGCCGCTAT+CGG 0.467101 4.1:+1203901 None:intergenic
TCTTCTGTTGTTGGGTTGTG+AGG 0.467157 4.1:+1207030 None:intergenic
TCAAAGTTACAAGAGCAAAC+GGG 0.468850 4.1:-1207901 MS.gene015611:CDS
AGGCATGAAAATCCTATCTT+GGG 0.473309 4.1:+1204975 None:intergenic
ATAGAAGAATCACAAAGAAT+AGG 0.477698 4.1:+1206334 None:intergenic
AATAAGGCTGTTTCCTTGTG+TGG 0.480317 4.1:-1204625 MS.gene015611:CDS
TCACTTGTGGAAAATTTACT+TGG 0.482007 4.1:-1206667 MS.gene015611:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 4.1:-1204676 MS.gene015611:CDS
GTCAAATAAACTTTATAAGC+CGG 0.482875 4.1:-1204861 MS.gene015611:CDS
ACTGATCCCCTAATCATGTA+TGG 0.483235 4.1:-1206589 MS.gene015611:CDS
GAGCTATCTGCCTGAACAAA+AGG 0.486203 4.1:+1204955 None:intergenic
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 4.1:-1204276 MS.gene015611:CDS
TCATGGGTTTGTGGAGAGGA+CGG 0.487640 4.1:-1204277 MS.gene015611:CDS
GGTGCATACTCATCCCTAAC+CGG 0.487653 4.1:+1207340 None:intergenic
AGTATGGAACGAAGGTCAAA+TGG 0.489767 4.1:+1205742 None:intergenic
CAAGGAAACAGCCTTATTGA+TGG 0.489776 4.1:+1204630 None:intergenic
AAGTGCCTAGTTGAACTAAT+GGG 0.492093 4.1:-1204886 MS.gene015611:CDS
AGGCGCCTGCAGCCACCCTC+CGG 0.492109 4.1:+1203954 None:intergenic
TCAGTTCGAAGCCTTCTGTT+CGG 0.494919 4.1:-1204013 MS.gene015611:CDS
TCATTCAAGCACATAGAGCT+TGG 0.496464 4.1:-1207861 MS.gene015611:CDS
GAGAACCCAACAACCTAAAA+GGG 0.497618 4.1:+1207100 None:intergenic
ATCCTATCTTGGGCCGAGAA+AGG 0.498744 4.1:+1204985 None:intergenic
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 4.1:+1204671 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 4.1:-1205225 MS.gene015611:CDS
GGAAACATCAAATGATATGT+AGG 0.503498 4.1:-1206498 MS.gene015611:intron
CTGGGAAAAGAGTCGCCTAA+TGG 0.504300 4.1:-1204043 MS.gene015611:CDS
AAAATCCGCGGTAAATGAAA+AGG 0.506447 4.1:+1204822 None:intergenic
GGATGATTTCCACGAAATGC+AGG 0.506772 4.1:-1206262 MS.gene015611:CDS
GACTGCTCAGGCATGTGGTA+AGG 0.508840 4.1:-1205839 MS.gene015611:CDS
GAGTCGATTGATATGATGTC+TGG 0.510772 4.1:-1207283 MS.gene015611:CDS
GATGGAGAGGACAGCGAATG+AGG 0.511200 4.1:-1203400 MS.gene015611:CDS
TTAATTGGAGGCAGATATGT+TGG 0.514349 4.1:-1206709 MS.gene015611:intron
TTTATAAGCCGGCCGCAGGT+TGG 0.515174 4.1:-1204850 MS.gene015611:CDS
CTTGTAACTTTGAAGCCAAA+GGG 0.516016 4.1:+1207911 None:intergenic
TGCACCGGTCATATTTGCTC+AGG 0.519789 4.1:-1207323 MS.gene015611:CDS
TTAAAGCCGTTGTGGTTGAT+GGG 0.520906 4.1:-1204723 MS.gene015611:CDS
TGAAGCTGGCAAATTAGAGC+TGG 0.522160 4.1:-1205773 MS.gene015611:CDS
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 4.1:-1203293 MS.gene015611:CDS
GAAATTAGAACACCTATGAA+TGG 0.524054 4.1:-1206075 MS.gene015611:CDS
TATAATCTCAAAACGCTAAG+TGG 0.524296 4.1:-1205168 MS.gene015611:CDS
AACAGGCAAGAAGAGACAGC+TGG 0.524546 4.1:-1204062 MS.gene015611:CDS
TTGTTCATAAAATTCATTCG+AGG 0.525613 4.1:+1205050 None:intergenic
AACACTCTTCATATGTAGCA+TGG 0.525664 4.1:+1203304 None:intergenic
CTTTGATGTGGAGTCACTTG+TGG 0.526300 4.1:-1206680 MS.gene015611:CDS
TGTATGATTGTAGGAATGCT+TGG 0.526473 4.1:-1205910 MS.gene015611:intron
CATCTACAGCAAAATGGACG+TGG 0.529606 4.1:-1207785 MS.gene015611:CDS
TCTAGAAATTATGGTGGTAC+CGG 0.530180 4.1:-1204928 MS.gene015611:CDS
ATGGATTACATCTGCTGTCA+TGG 0.530208 4.1:+1203323 None:intergenic
TTCAAATGCCAGAAATGGAC+GGG 0.532095 4.1:-1203832 MS.gene015611:intron
TACTAAAGTGAGAAGGAAAG+AGG 0.533010 4.1:-1207761 MS.gene015611:CDS
GTAAACCGGAGGGTGGCTGC+AGG 0.533229 4.1:-1203959 MS.gene015611:CDS
AATGGAAAGAGAGGCTTCAC+CGG 0.534549 4.1:-1207359 MS.gene015611:CDS
AAACCCTTCTGCCATTGACC+AGG 0.535215 4.1:-1207626 MS.gene015611:intron
TCAAGCACAAACCTGGTCAA+TGG 0.536283 4.1:+1207615 None:intergenic
AGCCGATGTTGCCAAGTCAC+AGG 0.537666 4.1:-1206217 MS.gene015611:intron
TCTTGTAACTTTGAAGCCAA+AGG 0.538214 4.1:+1207910 None:intergenic
ATGGTCTGTGTCGAAGACAC+TGG 0.538586 4.1:-1205018 MS.gene015611:CDS
AACTCGTCGAATTCGGGAGA+TGG 0.539466 4.1:-1203418 MS.gene015611:CDS
AAACTTTATAAGCCGGCCGC+AGG 0.541024 4.1:-1204854 MS.gene015611:CDS
TGTTTGAAATGTGGGATGGA+TGG 0.544805 4.1:-1203285 MS.gene015611:CDS
TTTGATAAAGCTAAATCCGC+AGG 0.546457 4.1:-1204157 MS.gene015611:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 4.1:+1204080 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4.1:-1207090 MS.gene015611:CDS
GTCGAATTCGGGAGATGGAG+AGG 0.549539 4.1:-1203413 MS.gene015611:CDS
ATAAGGCTGTTTCCTTGTGT+GGG 0.549996 4.1:-1204624 MS.gene015611:CDS
GAGCTCATTAAAGCGACCGC+AGG 0.550704 4.1:-1207009 MS.gene015611:CDS
TGCTGATGAACGCAACAACT+GGG 0.552352 4.1:-1205136 MS.gene015611:CDS
GTTAACAACTCTTTGTGCAT+AGG 0.556014 4.1:+1207429 None:intergenic
GACCGAGCGAAAATTGAAGC+TGG 0.556250 4.1:-1205787 MS.gene015611:CDS
GAGAAGGATTCATGGGTTTG+TGG 0.557947 4.1:-1204286 MS.gene015611:CDS
ATTGGAGGCAGATATGTTGG+AGG 0.558944 4.1:-1206706 MS.gene015611:intron
TGACTATGCTCAGACTGCTC+AGG 0.560313 4.1:-1205851 MS.gene015611:CDS
AGTCTGAGCATAGTCACGTT+GGG 0.560336 4.1:+1205858 None:intergenic
GTAGCTAGAAGGATCATTTG+AGG 0.560581 4.1:+1204199 None:intergenic
GGATTCATGGGTTTGTGGAG+AGG 0.561266 4.1:-1204281 MS.gene015611:CDS
AGGTGCTTCCAACCTGCGGC+CGG 0.562519 4.1:+1204842 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 4.1:-1204675 MS.gene015611:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 4.1:+1204909 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 4.1:-1203294 MS.gene015611:CDS
GAAAGTGCTGTCCAATTTGG+CGG 0.567496 4.1:+1206366 None:intergenic
ACAATTTGTCTGAATCTCCC+AGG 0.568802 4.1:+1205487 None:intergenic
GTTTCCTGAGCAAATATGAC+CGG 0.569475 4.1:+1207319 None:intergenic
AAGGAAAAGTACCTGTGACT+TGG 0.570868 4.1:+1206206 None:intergenic
CACAAGTGACTCCACATCAA+AGG 0.571996 4.1:+1206681 None:intergenic
TATAAAGACAATGGAAAGAG+AGG 0.575171 4.1:-1207368 MS.gene015611:CDS
GTTTGAGAAGCAGCATGGAG+TGG 0.575227 4.1:-1207392 MS.gene015611:CDS
TAGAGGGCTTAAAGCCGTTG+TGG 0.575392 4.1:-1204731 MS.gene015611:CDS
CTTGAGACTTATCGAAATGG+AGG 0.580908 4.1:-1205222 MS.gene015611:CDS
TATGGCAACCAATACGAAGA+AGG 0.582214 4.1:-1206571 MS.gene015611:CDS
CCACTGAGAGCTAGTATGGT+GGG 0.584057 4.1:-1204109 MS.gene015611:CDS
CAAACCTGGTCAATGGCAGA+AGG 0.584600 4.1:+1207622 None:intergenic
TACCTGTGACTTGGCAACAT+CGG 0.584979 4.1:+1206215 None:intergenic
CTTAAATATTCCAAAATCCG+CGG 0.588225 4.1:+1204810 None:intergenic
GCTTGGTCTGCTTCTACGCA+CGG 0.590241 4.1:-1205893 MS.gene015611:CDS
ATTCAAATGCCAGAAATGGA+CGG 0.591431 4.1:-1203833 MS.gene015611:CDS
TAATGAGAGCTAGAGCTACT+GGG 0.593885 4.1:-1207140 MS.gene015611:CDS
TGGAGTGGTTATAAAGACAA+TGG 0.596726 4.1:-1207377 MS.gene015611:CDS
TTGATGACAATGGAGTAAAC+CGG 0.599633 4.1:-1203973 MS.gene015611:CDS
ACTCTTCATCAGCAATTAGG+TGG 0.601724 4.1:+1205103 None:intergenic
GAGCAGTTTGAGAAGCAGCA+TGG 0.604333 4.1:-1207397 MS.gene015611:CDS
ATGGAAAGTTGAAACAAGGA+TGG 0.605809 4.1:+1207657 None:intergenic
ACAGGCAAGAAGAGACAGCT+GGG 0.606308 4.1:-1204061 MS.gene015611:CDS
AGCAAGCATCAAAATTGTGA+GGG 0.607346 4.1:+1203864 None:intergenic
GAGGAGACGAATGGTGAATG+TGG 0.607644 4.1:-1203381 MS.gene015611:CDS
GGAGCTAAAAGTTCGAGCAG+AGG 0.610100 4.1:-1206241 MS.gene015611:CDS
CAACTGGACTGGAAACAGAA+TGG 0.610211 4.1:-1204238 MS.gene015611:CDS
GGATGGCAAGAGCATGAACA+TGG 0.613468 4.1:+1207674 None:intergenic
CAGTCTGAGCATAGTCACGT+TGG 0.615929 4.1:+1205857 None:intergenic
AAGTAGCGGCCTTTCGAAAG+CGG 0.618779 4.1:+1207462 None:intergenic
TTAAGCCCTCTAAAACTGGA+TGG 0.620083 4.1:+1204742 None:intergenic
GATGTGAAGTGTGCCGATAG+CGG 0.620620 4.1:-1203914 MS.gene015611:CDS
TCAGAGAAGTCTAGACACAA+AGG 0.620996 4.1:-1205697 MS.gene015611:CDS
AGCTCATTAAAGCGACCGCA+GGG 0.621429 4.1:-1207008 MS.gene015611:intron
TGGTTGCCATACATGATTAG+GGG 0.623830 4.1:+1206583 None:intergenic
CAAAGTTACAAGAGCAAACG+GGG 0.624122 4.1:-1207900 MS.gene015611:CDS
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 4.1:-1203289 MS.gene015611:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 4.1:-1207425 MS.gene015611:CDS
AAGCAAGCATCAAAATTGTG+AGG 0.627279 4.1:+1203863 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.629395 4.1:-1206692 MS.gene015611:CDS
GTCTTCGACACAGACCATCA+AGG 0.633984 4.1:+1205023 None:intergenic
TTGAGACTTATCGAAATGGA+GGG 0.635447 4.1:-1205221 MS.gene015611:CDS
AAACCTGGTCAATGGCAGAA+GGG 0.635904 4.1:+1207623 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 4.1:-1207471 MS.gene015611:CDS
TTTGTACAGGTATCACCAGA+AGG 0.636717 4.1:-1206391 MS.gene015611:intron
TGGCAAATTAGAGCTGGAAG+CGG 0.637994 4.1:-1205767 MS.gene015611:CDS
CGAATGGTGAATGTGGTGAA+AGG 0.638437 4.1:-1203374 MS.gene015611:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4.1:-1207085 MS.gene015611:CDS
AAAATGGTGCTTCCAGCACA+GGG 0.643044 4.1:-1204600 MS.gene015611:intron
GAATCATATTGTCAAAGTAG+AGG 0.643202 4.1:-1206283 MS.gene015611:CDS
ATACTGCAGTTCACTGAGCG+AGG 0.645750 4.1:-1205303 MS.gene015611:intron
GACCACCCATTAGTTCAACT+AGG 0.646099 4.1:+1204881 None:intergenic
GGTTAGGGATGAGTATGCAC+CGG 0.649698 4.1:-1207338 MS.gene015611:CDS
GCCACTGAGAGCTAGTATGG+TGG 0.649946 4.1:-1204110 MS.gene015611:CDS
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 4.1:+1207914 None:intergenic
GCTCAGACTGCTCAGGCATG+TGG 0.653319 4.1:-1205844 MS.gene015611:CDS
ACAGCGAATGAGGAGACGAA+TGG 0.654884 4.1:-1203390 MS.gene015611:CDS
CACCGTATCACTAAAACCTG+CGG 0.656600 4.1:+1204141 None:intergenic
AATAATGGAAAGTTGAAACA+AGG 0.658333 4.1:+1207653 None:intergenic
GATTGATATGATGTCTGGAG+AGG 0.658590 4.1:-1207278 MS.gene015611:intron
ACATCATATCAATCGACTCA+AGG 0.660613 4.1:+1207287 None:intergenic
GAAGTTGTGCATGCATCTAG+CGG 0.666517 4.1:-1205192 MS.gene015611:CDS
TAAGAAGAATCCAATAACTG+AGG 0.666691 4.1:-1204791 MS.gene015611:CDS
ATATTGTTATGGGAGATCCT+GGG 0.667347 4.1:-1205504 MS.gene015611:CDS
CAATGGAGTAAACCGGAGGG+TGG 0.669359 4.1:-1203966 MS.gene015611:CDS
CATCATCGAGTATGGAACGA+AGG 0.675752 4.1:+1205734 None:intergenic
TGCCTAGTTGAACTAATGGG+TGG 0.680573 4.1:-1204883 MS.gene015611:CDS
AAGGCCGCTACTTAGTGGAG+TGG 0.681896 4.1:-1207452 MS.gene015611:CDS
GAAAAGGTGCTTCCAACCTG+CGG 0.683040 4.1:+1204838 None:intergenic
TCGACTTCTAGAAATTATGG+TGG 0.683726 4.1:-1204934 MS.gene015611:CDS
ATCTACAGCAAAATGGACGT+GGG 0.684272 4.1:-1207784 MS.gene015611:CDS
ATGACAATGGAGTAAACCGG+AGG 0.689272 4.1:-1203970 MS.gene015611:CDS
TGACAATGGAGTAAACCGGA+GGG 0.689626 4.1:-1203969 MS.gene015611:CDS
ACGTGGGTACTAAAGTGAGA+AGG 0.690355 4.1:-1207768 MS.gene015611:CDS
AGGTTTCCCATCAACCACAA+CGG 0.697501 4.1:+1204717 None:intergenic
CCCACCATACTAGCTCTCAG+TGG 0.729319 4.1:+1204109 None:intergenic
TAGGCCACTCCACTAAGTAG+CGG 0.749192 4.1:+1207448 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAACAAG+CGG + chr4.1:1203907-1203926 None:intergenic 10.0%
!! TTCATAATAATATCTTAATT+TGG - chr4.1:1205510-1205529 MS.gene015611:CDS 10.0%
!!! TCGATTATTAAATTTTTTTT+TGG - chr4.1:1207336-1207355 MS.gene015611:CDS 10.0%
!!! TGTTTTTTTTTTTTTTTTTG+TGG - chr4.1:1203909-1203928 MS.gene015611:CDS 10.0%
!! AAAGGTAAAATGAAAAAAAA+AGG + chr4.1:1205571-1205590 None:intergenic 15.0%
!! AATGAACTTTAACAAATATA+TGG + chr4.1:1205854-1205873 None:intergenic 15.0%
!! ATATACAAACAAATATAGTA+TGG + chr4.1:1207590-1207609 None:intergenic 15.0%
!! ATTAACTGAGTTAAAATATT+TGG - chr4.1:1206785-1206804 MS.gene015611:intron 15.0%
!! ATTATTAATGAGAAAGTGAA+AGG + chr4.1:1205181-1205200 None:intergenic 20.0%
!! TATTATTATGAAACTCGTAT+TGG + chr4.1:1205502-1205521 None:intergenic 20.0%
!! TTAGTAATGCAAATAACTTT+AGG + chr4.1:1205725-1205744 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG + chr4.1:1206830-1206849 None:intergenic 20.0%
!! TTTGTGATTCTTCTATTAAT+CGG - chr4.1:1204804-1204823 MS.gene015611:CDS 20.0%
!!! ATTAATGACTTTTTAATTGG+AGG - chr4.1:1204410-1204429 MS.gene015611:intron 20.0%
!!! ATTTTTAGTGAACTAATGTT+AGG - chr4.1:1206593-1206612 MS.gene015611:CDS 20.0%
!!! GTGATTAATGACTTTTTAAT+TGG - chr4.1:1204407-1204426 MS.gene015611:intron 20.0%
!!! TGATATTATTTTTGTTGAGA+AGG - chr4.1:1206829-1206848 MS.gene015611:intron 20.0%
!!! TTAATCGGTTACATTTTATA+TGG - chr4.1:1204819-1204838 MS.gene015611:CDS 20.0%
!!! TTCTCAAATTAATGTTTCTA+TGG - chr4.1:1203294-1203313 MS.gene015611:CDS 20.0%
! AAAAAAAAAAAAACAAGCGG+TGG + chr4.1:1203904-1203923 None:intergenic 25.0%
! AAAGTTCCAGATATTGTTAT+GGG - chr4.1:1205617-1205636 MS.gene015611:intron 25.0%
! AATCATCAAATAATCATCAG+AGG + chr4.1:1203612-1203631 None:intergenic 25.0%
! ACACATAACATGTATAGATA+AGG + chr4.1:1207616-1207635 None:intergenic 25.0%
! ATAGAAGAATCACAAAGAAT+AGG + chr4.1:1204800-1204819 None:intergenic 25.0%
! CAAATTGTAACAAATCTTGT+TGG - chr4.1:1205659-1205678 MS.gene015611:intron 25.0%
! GCAATGCATTAATTACAAAA+AGG + chr4.1:1206572-1206591 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG - chr4.1:1206270-1206289 MS.gene015611:CDS 25.0%
! TAAAGTTCCAGATATTGTTA+TGG - chr4.1:1205616-1205635 MS.gene015611:intron 25.0%
! TACTAATATGCATGTTATGT+TGG - chr4.1:1205739-1205758 MS.gene015611:CDS 25.0%
! TATCATTGAATTTATCAGCA+AGG + chr4.1:1207453-1207472 None:intergenic 25.0%
! TGAATTCCATTTACCTATAT+TGG - chr4.1:1207785-1207804 MS.gene015611:CDS 25.0%
! TGAGTTAAAATATTTGGTTG+TGG - chr4.1:1206791-1206810 MS.gene015611:intron 25.0%
! TGTTTCATATGTGTAATTAG+AGG - chr4.1:1204200-1204219 MS.gene015611:CDS 25.0%
! TTAGATCATCAAATAAAGAG+AGG + chr4.1:1205539-1205558 None:intergenic 25.0%
! TTGTTCATAAAATTCATTCG+AGG + chr4.1:1206084-1206103 None:intergenic 25.0%
!! AATAATGGAAAGTTGAAACA+AGG + chr4.1:1203481-1203500 None:intergenic 25.0%
!! CATGTACTAACATTATTTTC+AGG - chr4.1:1207682-1207701 MS.gene015611:CDS 25.0%
!! TTATGATCAAACTTTTGTAC+AGG - chr4.1:1204727-1204746 MS.gene015611:CDS 25.0%
!!! GAAAGCATATGTTACATTTT+AGG + chr4.1:1205155-1205174 None:intergenic 25.0%
AAAACTCTTCATCAGCAATT+AGG + chr4.1:1206034-1206053 None:intergenic 30.0%
AATCATCAGAGGATACATAA+AGG + chr4.1:1203601-1203620 None:intergenic 30.0%
ACAAAACTCTGTATGATTGT+AGG - chr4.1:1205212-1205231 MS.gene015611:CDS 30.0%
ACATCAAATGATATGTAGGT+AGG - chr4.1:1204637-1204656 MS.gene015611:CDS 30.0%
AGCTGACAATTAGTGAAATA+AGG + chr4.1:1204154-1204173 None:intergenic 30.0%
ATCATTTGATGTTTCCTGTA+TGG + chr4.1:1204629-1204648 None:intergenic 30.0%
CAAAATCAAGCTTACTTTCA+TGG + chr4.1:1204601-1204620 None:intergenic 30.0%
CAACAAAAATAATATCAGGC+TGG + chr4.1:1206826-1206845 None:intergenic 30.0%
CTTAAATATTCCAAAATCCG+CGG + chr4.1:1206324-1206343 None:intergenic 30.0%
GAAATTAGAACACCTATGAA+TGG - chr4.1:1205056-1205075 MS.gene015611:CDS 30.0%
GAATCATATTGTCAAAGTAG+AGG - chr4.1:1204848-1204867 MS.gene015611:CDS 30.0%
GGAAACATCAAATGATATGT+AGG - chr4.1:1204633-1204652 MS.gene015611:CDS 30.0%
TAAAGATTCTCTTCCTCAAA+AGG + chr4.1:1207885-1207904 None:intergenic 30.0%
TAAGAAGAATCCAATAACTG+AGG - chr4.1:1206340-1206359 MS.gene015611:CDS 30.0%
TACTAATATTCGTAGCTAGA+AGG + chr4.1:1206946-1206965 None:intergenic 30.0%
TATAAAGACAATGGAAAGAG+AGG - chr4.1:1203763-1203782 MS.gene015611:intron 30.0%
TATAATCTCAAAACGCTAAG+TGG - chr4.1:1205963-1205982 MS.gene015611:intron 30.0%
TATGTGTAATTAGAGGATGA+AGG - chr4.1:1204207-1204226 MS.gene015611:CDS 30.0%
TCACTTGTGGAAAATTTACT+TGG - chr4.1:1204464-1204483 MS.gene015611:intron 30.0%
TTAAAATATTTGGTTGTGGC+AGG - chr4.1:1206795-1206814 MS.gene015611:intron 30.0%
TTACCTAAAATGCCATTCAT+AGG + chr4.1:1205071-1205090 None:intergenic 30.0%
TTCAAAGTTACAAGAGCAAA+CGG - chr4.1:1203229-1203248 MS.gene015611:CDS 30.0%
! AAATTTTCTTTCCGAACAGA+AGG + chr4.1:1207132-1207151 None:intergenic 30.0%
! CATGAAAGTAAGCTTGATTT+TGG - chr4.1:1204599-1204618 MS.gene015611:intron 30.0%
! CTACTGTACATTACATTTTC+TGG - chr4.1:1204669-1204688 MS.gene015611:CDS 30.0%
! GGAAACTTTTGCAGAATATA+CGG - chr4.1:1203640-1203659 MS.gene015611:intron 30.0%
! GTTACATTTTATATGGTGCT+GGG - chr4.1:1204826-1204845 MS.gene015611:CDS 30.0%
! GTTCGGAAAGAAAATTTTAG+TGG - chr4.1:1207135-1207154 MS.gene015611:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG - chr4.1:1207869-1207888 MS.gene015611:CDS 30.0%
! TTATTTGATGATTTCCCTTC+AGG - chr4.1:1203619-1203638 MS.gene015611:intron 30.0%
! TTCATTTTACCTTTCTTAGC+TGG - chr4.1:1205577-1205596 MS.gene015611:intron 30.0%
! TTTTGTTGAGAAGGATTCAT+GGG - chr4.1:1206838-1206857 MS.gene015611:intron 30.0%
! TTTTTGTTGAGAAGGATTCA+TGG - chr4.1:1206837-1206856 MS.gene015611:intron 30.0%
!! AAGTTTTGATCATTCTGTGT+TGG - chr4.1:1203539-1203558 MS.gene015611:intron 30.0%
!! AGAAAACTGTTTCTGTTACA+AGG - chr4.1:1204340-1204359 MS.gene015611:intron 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG - chr4.1:1207838-1207857 MS.gene015611:CDS 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - chr4.1:1203953-1203972 MS.gene015611:CDS 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG - chr4.1:1207837-1207856 MS.gene015611:CDS 30.0%
!!! ATTTTAGTGGTTGATGACAA+TGG - chr4.1:1207148-1207167 MS.gene015611:CDS 30.0%
AAAAAAAACAAGCGGTGGAA+TGG + chr4.1:1203899-1203918 None:intergenic 35.0%
AAAACTTTCAAGCACAAACC+TGG + chr4.1:1203526-1203545 None:intergenic 35.0%
AAAATCCGCGGTAAATGAAA+AGG + chr4.1:1206312-1206331 None:intergenic 35.0%
AAACATCACCTTCTTCGTAT+TGG + chr4.1:1204571-1204590 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG + chr4.1:1207830-1207849 None:intergenic 35.0%
AAGCAAGCATCAAAATTGTG+AGG + chr4.1:1207271-1207290 None:intergenic 35.0%
AAGCTTGAGACTTATCGAAA+TGG - chr4.1:1205906-1205925 MS.gene015611:intron 35.0%
AAGGCATGAAAATCCTATCT+TGG + chr4.1:1206160-1206179 None:intergenic 35.0%
AAGTGCCTAGTTGAACTAAT+GGG - chr4.1:1206245-1206264 MS.gene015611:CDS 35.0%
AATTTACTTGGTCAACTTGC+TGG - chr4.1:1204476-1204495 MS.gene015611:intron 35.0%
AGATACCATTTGAAGAGACT+TGG - chr4.1:1206455-1206474 MS.gene015611:intron 35.0%
AGCAAGCATCAAAATTGTGA+GGG + chr4.1:1207270-1207289 None:intergenic 35.0%
AGGCATGAAAATCCTATCTT+GGG + chr4.1:1206159-1206178 None:intergenic 35.0%
AGTCACACATGAATCATGAT+AGG - chr4.1:1206647-1206666 MS.gene015611:CDS 35.0%
ATATTGTTATGGGAGATCCT+GGG - chr4.1:1205627-1205646 MS.gene015611:intron 35.0%
ATGGAAAGTTGAAACAAGGA+TGG + chr4.1:1203477-1203496 None:intergenic 35.0%
ATTCAAATGCCAGAAATGGA+CGG - chr4.1:1207298-1207317 MS.gene015611:CDS 35.0%
ATTCTGCAAAAGTTTCCTGA+AGG + chr4.1:1203637-1203656 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG + chr4.1:1204553-1204572 None:intergenic 35.0%
CAGAAGGGTTTCTGTAATAA+TGG + chr4.1:1203496-1203515 None:intergenic 35.0%
CGATGCTTCAACTAAAAAAG+TGG - chr4.1:1206058-1206077 MS.gene015611:intron 35.0%
CGTTATTGTTGCGTAATCAA+AGG + chr4.1:1204986-1205005 None:intergenic 35.0%
GATACCATTTGAAGAGACTT+GGG - chr4.1:1206456-1206475 MS.gene015611:intron 35.0%
GATTCATGTGTGACTTTAGA+TGG + chr4.1:1206642-1206661 None:intergenic 35.0%
GGATATTCAAATGCCAGAAA+TGG - chr4.1:1207294-1207313 MS.gene015611:CDS 35.0%
GTTAACAACTCTTTGTGCAT+AGG + chr4.1:1203705-1203724 None:intergenic 35.0%
GTTTCTATGGATTCTTCTGA+TGG - chr4.1:1203307-1203326 MS.gene015611:CDS 35.0%
TAAGTGCCTAGTTGAACTAA+TGG - chr4.1:1206244-1206263 MS.gene015611:CDS 35.0%
TAATGAGCTCTTCTGTTGTT+GGG + chr4.1:1204112-1204131 None:intergenic 35.0%
TACTAAAGTGAGAAGGAAAG+AGG - chr4.1:1203370-1203389 MS.gene015611:CDS 35.0%
TCAAAGTTACAAGAGCAAAC+GGG - chr4.1:1203230-1203249 MS.gene015611:CDS 35.0%
TCATGGCCAATATAGGTAAA+TGG + chr4.1:1207794-1207813 None:intergenic 35.0%
TCGTATCATCTACAGCAAAA+TGG - chr4.1:1203340-1203359 MS.gene015611:CDS 35.0%
TCTAGAAATTATGGTGGTAC+CGG - chr4.1:1206203-1206222 MS.gene015611:intron 35.0%
TCTGTTACAAGGCTTGTATT+TGG - chr4.1:1204351-1204370 MS.gene015611:intron 35.0%
TGAAATAAGGATATACCCTG+CGG + chr4.1:1204141-1204160 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG - chr4.1:1203706-1203725 MS.gene015611:intron 35.0%
TGGAATTGGAATTCCTTTCT+CGG - chr4.1:1206133-1206152 MS.gene015611:intron 35.0%
TGGAGTGGTTATAAAGACAA+TGG - chr4.1:1203754-1203773 MS.gene015611:intron 35.0%
TGTATGATTGTAGGAATGCT+TGG - chr4.1:1205221-1205240 MS.gene015611:CDS 35.0%
TTAATGAGCTCTTCTGTTGT+TGG + chr4.1:1204113-1204132 None:intergenic 35.0%
TTAATTGGAGGCAGATATGT+TGG - chr4.1:1204422-1204441 MS.gene015611:intron 35.0%
TTATGAACAAGTCACCTTGA+TGG - chr4.1:1206094-1206113 MS.gene015611:CDS 35.0%
TTCTGCAAAAGTTTCCTGAA+GGG + chr4.1:1203636-1203655 None:intergenic 35.0%
TTGAGACTTATCGAAATGGA+GGG - chr4.1:1205910-1205929 MS.gene015611:intron 35.0%
TTGGTTGCCATACATGATTA+GGG + chr4.1:1204552-1204571 None:intergenic 35.0%
TTTGATAAAGCTAAATCCGC+AGG - chr4.1:1206974-1206993 MS.gene015611:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG + chr4.1:1204292-1204311 None:intergenic 35.0%
! ACACCTATGAATGGCATTTT+AGG - chr4.1:1205065-1205084 MS.gene015611:CDS 35.0%
! ACATCATATCAATCGACTCA+AGG + chr4.1:1203847-1203866 None:intergenic 35.0%
! ACTTCTCTGAAAAAAGAGAG+AGG + chr4.1:1205424-1205443 None:intergenic 35.0%
! AGCTCGACTTCTAGAAATTA+TGG - chr4.1:1206194-1206213 MS.gene015611:intron 35.0%
! GATTTTCATGCCTTTTGTTC+AGG - chr4.1:1206166-1206185 MS.gene015611:intron 35.0%
! GGTTACATTTTATATGGTGC+TGG - chr4.1:1204825-1204844 MS.gene015611:CDS 35.0%
! TCGACTTCTAGAAATTATGG+TGG - chr4.1:1206197-1206216 MS.gene015611:intron 35.0%
! TGTGTCGATAACACTAATAG+TGG + chr4.1:1204301-1204320 None:intergenic 35.0%
! TTGATGACAATGGAGTAAAC+CGG - chr4.1:1207158-1207177 MS.gene015611:CDS 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG - chr4.1:1206746-1206765 MS.gene015611:intron 35.0%
! TTTTCATTTACCGCGGATTT+TGG - chr4.1:1206311-1206330 MS.gene015611:CDS 35.0%
!! AGGTTTTGTCTGGAAAAACT+TGG + chr4.1:1207919-1207938 None:intergenic 35.0%
!! CAATTTTGATGCTTGCTTCA+TGG - chr4.1:1207273-1207292 MS.gene015611:intron 35.0%
!! CTACTGAAATAGGTTTTGTC+TGG + chr4.1:1207929-1207948 None:intergenic 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG + chr4.1:1203223-1203242 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG + chr4.1:1203224-1203243 None:intergenic 35.0%
!! TTGATTTTGGAGATCCATAC+AGG - chr4.1:1204612-1204631 MS.gene015611:CDS 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG - chr4.1:1206384-1206403 MS.gene015611:CDS 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG - chr4.1:1204682-1204701 MS.gene015611:CDS 35.0%
ACAATTTGTCTGAATCTCCC+AGG + chr4.1:1205647-1205666 None:intergenic 40.0%
ACCTTCTTCACCTCAGTTAT+TGG + chr4.1:1206353-1206372 None:intergenic 40.0%
ACTCTTCATCAGCAATTAGG+TGG + chr4.1:1206031-1206050 None:intergenic 40.0%
ACTGATACTCAAACCAATGC+CGG + chr4.1:1206225-1206244 None:intergenic 40.0%
ACTGATCCCCTAATCATGTA+TGG - chr4.1:1204542-1204561 MS.gene015611:intron 40.0%
AGTATGGAACGAAGGTCAAA+TGG + chr4.1:1205392-1205411 None:intergenic 40.0%
AGTCGCAAATGCCATCAATA+AGG - chr4.1:1206490-1206509 MS.gene015611:intron 40.0%
ATAATGAGAGCTAGAGCTAC+TGG - chr4.1:1203990-1204009 MS.gene015611:CDS 40.0%
ATCTACAGCAAAATGGACGT+GGG - chr4.1:1203347-1203366 MS.gene015611:CDS 40.0%
CAAAGTTACAAGAGCAAACG+GGG - chr4.1:1203231-1203250 MS.gene015611:CDS 40.0%
CGAACTGAAGTTGAACCATT+AGG + chr4.1:1207106-1207125 None:intergenic 40.0%
CGTTGCTAAACCTATTGTGA+AGG - chr4.1:1205476-1205495 MS.gene015611:CDS 40.0%
CTTAAAAACTTACCCTGTGC+TGG + chr4.1:1206546-1206565 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG - chr4.1:1205909-1205928 MS.gene015611:intron 40.0%
GAGAACCCAACAACCTAAAA+GGG + chr4.1:1204034-1204053 None:intergenic 40.0%
GAGTCGATTGATATGATGTC+TGG - chr4.1:1203848-1203867 MS.gene015611:CDS 40.0%
GATATGTAGGTAGGTTCTTC+TGG - chr4.1:1204646-1204665 MS.gene015611:CDS 40.0%
GATATTGTTATGGGAGATCC+TGG - chr4.1:1205626-1205645 MS.gene015611:intron 40.0%
GATTGATATGATGTCTGGAG+AGG - chr4.1:1203853-1203872 MS.gene015611:CDS 40.0%
GGATCTCCCATAACAATATC+TGG + chr4.1:1205626-1205645 None:intergenic 40.0%
GGCAACTCTGTTAAAGTAAG+TGG - chr4.1:1205680-1205699 MS.gene015611:intron 40.0%
GGGAGCTTAGATTTGTAAAC+AGG + chr4.1:1204083-1204102 None:intergenic 40.0%
GGGTAGTCTTTGTGATCAAA+GGG - chr4.1:1203397-1203416 MS.gene015611:CDS 40.0%
GGTTGACACTAACACTGAAT+TGG + chr4.1:1203439-1203458 None:intergenic 40.0%
GTAGCTAGAAGGATCATTTG+AGG + chr4.1:1206935-1206954 None:intergenic 40.0%
GTATCCCAAGTCTCTTCAAA+TGG + chr4.1:1206463-1206482 None:intergenic 40.0%
GTCTAGACACAAAGGTTTAG+AGG - chr4.1:1205442-1205461 MS.gene015611:intron 40.0%
GTTTCCTGAGCAAATATGAC+CGG + chr4.1:1203815-1203834 None:intergenic 40.0%
GTTTCCTTGTGTGGGAAAAA+TGG - chr4.1:1206515-1206534 MS.gene015611:CDS 40.0%
TAATGAGAGCTAGAGCTACT+GGG - chr4.1:1203991-1204010 MS.gene015611:CDS 40.0%
TATGGCAACCAATACGAAGA+AGG - chr4.1:1204560-1204579 MS.gene015611:intron 40.0%
TCAGAGAAGTCTAGACACAA+AGG - chr4.1:1205434-1205453 MS.gene015611:intron 40.0%
TCATTCAAGCACATAGAGCT+TGG - chr4.1:1203270-1203289 MS.gene015611:CDS 40.0%
TCCAATAACTGAGGTGAAGA+AGG - chr4.1:1206349-1206368 MS.gene015611:CDS 40.0%
TGAGAACCCAACAACCTAAA+AGG + chr4.1:1204035-1204054 None:intergenic 40.0%
TGGGTAGTCTTTGTGATCAA+AGG - chr4.1:1203396-1203415 MS.gene015611:CDS 40.0%
TGGTTGCCATACATGATTAG+GGG + chr4.1:1204551-1204570 None:intergenic 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG - chr4.1:1206408-1206427 MS.gene015611:intron 40.0%
TTCAAATGCCAGAAATGGAC+GGG - chr4.1:1207299-1207318 MS.gene015611:CDS 40.0%
TTGAAGCAACTCGTCGAATT+CGG - chr4.1:1207706-1207725 MS.gene015611:CDS 40.0%
TTGTTGGGTTCTCATCATCT+CGG - chr4.1:1204041-1204060 MS.gene015611:CDS 40.0%
TTTGTACAGGTATCACCAGA+AGG - chr4.1:1204740-1204759 MS.gene015611:CDS 40.0%
! AAGCACCTTTTCATTTACCG+CGG - chr4.1:1206304-1206323 MS.gene015611:CDS 40.0%
! AATAAGGCTGTTTCCTTGTG+TGG - chr4.1:1206506-1206525 MS.gene015611:CDS 40.0%
! AATGCACGTAACTTGCATGT+TGG - chr4.1:1207486-1207505 MS.gene015611:CDS 40.0%
! ACTTTTCCTTGACATGTCGT+TGG - chr4.1:1204938-1204957 MS.gene015611:CDS 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG - chr4.1:1207842-1207861 MS.gene015611:CDS 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG - chr4.1:1203376-1203395 MS.gene015611:CDS 40.0%
! ATAAGGCTGTTTCCTTGTGT+GGG - chr4.1:1206507-1206526 MS.gene015611:CDS 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG + chr4.1:1207200-1207219 None:intergenic 40.0%
! ATGGATTACATCTGCTGTCA+TGG + chr4.1:1207811-1207830 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG + chr4.1:1205895-1205914 None:intergenic 40.0%
! CTTTTGCAGAATATACGGCT+AGG - chr4.1:1203645-1203664 MS.gene015611:intron 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG - chr4.1:1203377-1203396 MS.gene015611:CDS 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG + chr4.1:1205894-1205913 None:intergenic 40.0%
! TGCTGGTCATCAAGCAATTT+TGG - chr4.1:1204493-1204512 MS.gene015611:intron 40.0%
! TGTTTGAAATGTGGGATGGA+TGG - chr4.1:1207846-1207865 MS.gene015611:CDS 40.0%
!! AAGGAAAAGTACCTGTGACT+TGG + chr4.1:1204928-1204947 None:intergenic 40.0%
!! ATCCGCAGGTTTTAGTGATA+CGG - chr4.1:1206988-1207007 MS.gene015611:intron 40.0%
!! CAAGGAAACAGCCTTATTGA+TGG + chr4.1:1206504-1206523 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG - chr4.1:1206383-1206402 MS.gene015611:CDS 40.0%
!! GTAGAAAGTGCTGTCCAATT+TGG + chr4.1:1204771-1204790 None:intergenic 40.0%
!! TCTCATTTTTGCAATGCAGG+AGG - chr4.1:1203956-1203975 MS.gene015611:CDS 40.0%
!! TTAAGCCCTCTAAAACTGGA+TGG + chr4.1:1206392-1206411 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG - chr4.1:1204026-1204045 MS.gene015611:CDS 40.0%
AAAAATGGTGCTTCCAGCAC+AGG - chr4.1:1206530-1206549 MS.gene015611:CDS 45.0%
AAAATGGTGCTTCCAGCACA+GGG - chr4.1:1206531-1206550 MS.gene015611:CDS 45.0%
AAACCTGGTCAATGGCAGAA+GGG + chr4.1:1203511-1203530 None:intergenic 45.0%
AACAGAAAGCCCGCAACAAA+TGG - chr4.1:1205882-1205901 MS.gene015611:CDS 45.0%
AATGGAAAGAGAGGCTTCAC+CGG - chr4.1:1203772-1203791 MS.gene015611:intron 45.0%
ACGTGGGTACTAAAGTGAGA+AGG - chr4.1:1203363-1203382 MS.gene015611:CDS 45.0%
AGAGAGGACATCATCGAGTA+TGG + chr4.1:1205408-1205427 None:intergenic 45.0%
AGGTTTCCCATCAACCACAA+CGG + chr4.1:1206417-1206436 None:intergenic 45.0%
AGTCTGAGCATAGTCACGTT+GGG + chr4.1:1205276-1205295 None:intergenic 45.0%
ATGACAATGGAGTAAACCGG+AGG - chr4.1:1207161-1207180 MS.gene015611:intron 45.0%
ATTGGAGGCAGATATGTTGG+AGG - chr4.1:1204425-1204444 MS.gene015611:intron 45.0%
CAAACATACCCGTCCATTTC+TGG + chr4.1:1207310-1207329 None:intergenic 45.0%
CACAAGTGACTCCACATCAA+AGG + chr4.1:1204453-1204472 None:intergenic 45.0%
CACCGTATCACTAAAACCTG+CGG + chr4.1:1206993-1207012 None:intergenic 45.0%
CATCATCGAGTATGGAACGA+AGG + chr4.1:1205400-1205419 None:intergenic 45.0%
CATCTACAGCAAAATGGACG+TGG - chr4.1:1203346-1203365 MS.gene015611:CDS 45.0%
CATTCTGTTTCCAGTCCAGT+TGG + chr4.1:1206895-1206914 None:intergenic 45.0%
CGAATGGTGAATGTGGTGAA+AGG - chr4.1:1207757-1207776 MS.gene015611:CDS 45.0%
CTTAAAGCCGTTGTGGTTGA+TGG - chr4.1:1206407-1206426 MS.gene015611:intron 45.0%
CTTTGATGTGGAGTCACTTG+TGG - chr4.1:1204451-1204470 MS.gene015611:intron 45.0%
GAAGTTGTGCATGCATCTAG+CGG - chr4.1:1205939-1205958 MS.gene015611:intron 45.0%
GACCACCCATTAGTTCAACT+AGG + chr4.1:1206253-1206272 None:intergenic 45.0%
GAGAAGGATTCATGGGTTTG+TGG - chr4.1:1206845-1206864 MS.gene015611:intron 45.0%
GAGAGAGAGAGAGAGAATCT+TGG + chr4.1:1205096-1205115 None:intergenic 45.0%
GAGCTATCTGCCTGAACAAA+AGG + chr4.1:1206179-1206198 None:intergenic 45.0%
GGATGATTTCCACGAAATGC+AGG - chr4.1:1204869-1204888 MS.gene015611:CDS 45.0%
TCAAGCACAAACCTGGTCAA+TGG + chr4.1:1203519-1203538 None:intergenic 45.0%
TCAGTTCGAAGCCTTCTGTT+CGG - chr4.1:1207118-1207137 MS.gene015611:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG + chr4.1:1207801-1207820 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG - chr4.1:1207707-1207726 MS.gene015611:CDS 45.0%
TGAAGCTGGCAAATTAGAGC+TGG - chr4.1:1205358-1205377 MS.gene015611:intron 45.0%
TGACAATGGAGTAAACCGGA+GGG - chr4.1:1207162-1207181 MS.gene015611:intron 45.0%
TGCCTAGTTGAACTAATGGG+TGG - chr4.1:1206248-1206267 MS.gene015611:CDS 45.0%
TGCTGATGAACGCAACAACT+GGG - chr4.1:1205995-1206014 MS.gene015611:intron 45.0%
TGGCAAATTAGAGCTGGAAG+CGG - chr4.1:1205364-1205383 MS.gene015611:intron 45.0%
TGTGTCGAAGACACTGGAAT+TGG - chr4.1:1206119-1206138 MS.gene015611:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG - chr4.1:1204439-1204458 MS.gene015611:intron 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG - chr4.1:1207045-1207064 MS.gene015611:CDS 45.0%
! CAACTGGACTGGAAACAGAA+TGG - chr4.1:1206893-1206912 MS.gene015611:intron 45.0%
! CTTCTGTTGTTGGGTTGTGA+GGG + chr4.1:1204103-1204122 None:intergenic 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG - chr4.1:1207046-1207065 MS.gene015611:CDS 45.0%
! TACCTGTGACTTGGCAACAT+CGG + chr4.1:1204919-1204938 None:intergenic 45.0%
! TCTTCTGTTGTTGGGTTGTG+AGG + chr4.1:1204104-1204123 None:intergenic 45.0%
! TGCCAGCTTCAATTTTCGCT+CGG + chr4.1:1205349-1205368 None:intergenic 45.0%
! TGTTGCGGGCTTTCTGTTTT+CGG + chr4.1:1205880-1205899 None:intergenic 45.0%
!! AATTATGGTGGTACCGGCAT+TGG - chr4.1:1206209-1206228 MS.gene015611:intron 45.0%
!! AGCACCATTTTTCCCACACA+AGG + chr4.1:1206522-1206541 None:intergenic 45.0%
!! CTCGTATTGGCCTTCACAAT+AGG + chr4.1:1205489-1205508 None:intergenic 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG + chr4.1:1207054-1207073 None:intergenic 45.0%
!! CTGTTCTGACTAGCCCTTTT+AGG - chr4.1:1204018-1204037 MS.gene015611:CDS 45.0%
!! GAAAGTGCTGTCCAATTTGG+CGG + chr4.1:1204768-1204787 None:intergenic 45.0%
!! GGCTTTAAGCCCTCTAAAAC+TGG + chr4.1:1206396-1206415 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG + chr4.1:1203220-1203239 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG - chr4.1:1207052-1207071 MS.gene015611:CDS 45.0%
!!! CTTTTAGCTCCTGCATTTCG+TGG + chr4.1:1204881-1204900 None:intergenic 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG - chr4.1:1204025-1204044 MS.gene015611:CDS 45.0%
AAACCCTTCTGCCATTGACC+AGG - chr4.1:1203505-1203524 MS.gene015611:intron 50.0%
AAACTTTATAAGCCGGCCGC+AGG - chr4.1:1206277-1206296 MS.gene015611:CDS 50.0%
AACAGGCAAGAAGAGACAGC+TGG - chr4.1:1207069-1207088 MS.gene015611:CDS 50.0%
AACTCGTCGAATTCGGGAGA+TGG - chr4.1:1207713-1207732 MS.gene015611:CDS 50.0%
AAGAGCAGCTTTGCCGCTAT+CGG + chr4.1:1207233-1207252 None:intergenic 50.0%
AAGTAGCGGCCTTTCGAAAG+CGG + chr4.1:1203672-1203691 None:intergenic 50.0%
ACAGCGAATGAGGAGACGAA+TGG - chr4.1:1207741-1207760 MS.gene015611:CDS 50.0%
ACAGGCAAGAAGAGACAGCT+GGG - chr4.1:1207070-1207089 MS.gene015611:CDS 50.0%
AGCTCATTAAAGCGACCGCA+GGG - chr4.1:1204123-1204142 MS.gene015611:CDS 50.0%
ATACTGCAGTTCACTGAGCG+AGG - chr4.1:1205828-1205847 MS.gene015611:CDS 50.0%
ATCCTATCTTGGGCCGAGAA+AGG + chr4.1:1206149-1206168 None:intergenic 50.0%
ATGGTCTGTGTCGAAGACAC+TGG - chr4.1:1206113-1206132 MS.gene015611:intron 50.0%
CAAACCTGGTCAATGGCAGA+AGG + chr4.1:1203512-1203531 None:intergenic 50.0%
CAAGTGCCAACGACATGTCA+AGG + chr4.1:1204947-1204966 None:intergenic 50.0%
CAGTCTGAGCATAGTCACGT+TGG + chr4.1:1205277-1205296 None:intergenic 50.0%
CCACTGAGAGCTAGTATGGT+GGG - chr4.1:1207022-1207041 MS.gene015611:CDS 50.0%
CGAACACTGCCAGCTAAGAA+AGG + chr4.1:1205589-1205608 None:intergenic 50.0%
CTGCTGATGAACGCAACAAC+TGG - chr4.1:1205994-1206013 MS.gene015611:intron 50.0%
CTGGGAAAAGAGTCGCCTAA+TGG - chr4.1:1207088-1207107 MS.gene015611:CDS 50.0%
CTTGACATGTCGTTGGCACT+TGG - chr4.1:1204945-1204964 MS.gene015611:CDS 50.0%
GAAGCCACTGAGAGCTAGTA+TGG - chr4.1:1207018-1207037 MS.gene015611:CDS 50.0%
GACCGAGCGAAAATTGAAGC+TGG - chr4.1:1205344-1205363 MS.gene015611:intron 50.0%
GAGCAGTTTGAGAAGCAGCA+TGG - chr4.1:1203734-1203753 MS.gene015611:intron 50.0%
GAGGAGACGAATGGTGAATG+TGG - chr4.1:1207750-1207769 MS.gene015611:CDS 50.0%
GGAGCTAAAAGTTCGAGCAG+AGG - chr4.1:1204890-1204909 MS.gene015611:CDS 50.0%
GGATTCATGGGTTTGTGGAG+AGG - chr4.1:1206850-1206869 MS.gene015611:intron 50.0%
GGTGCATACTCATCCCTAAC+CGG + chr4.1:1203794-1203813 None:intergenic 50.0%
GGTTAGGGATGAGTATGCAC+CGG - chr4.1:1203793-1203812 MS.gene015611:intron 50.0%
GTCTTCGACACAGACCATCA+AGG + chr4.1:1206111-1206130 None:intergenic 50.0%
GTTTGAGAAGCAGCATGGAG+TGG - chr4.1:1203739-1203758 MS.gene015611:intron 50.0%
TAGAGGGCTTAAAGCCGTTG+TGG - chr4.1:1206400-1206419 MS.gene015611:intron 50.0%
TAGGCCACTCCACTAAGTAG+CGG + chr4.1:1203686-1203705 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG - chr4.1:1206854-1206873 MS.gene015611:intron 50.0%
TGACTATGCTCAGACTGCTC+AGG - chr4.1:1205280-1205299 MS.gene015611:CDS 50.0%
TTCCTTTCTCGGCCCAAGAT+AGG - chr4.1:1206144-1206163 MS.gene015611:intron 50.0%
TTCGAAAGGCCGCTACTTAG+TGG - chr4.1:1203674-1203693 MS.gene015611:intron 50.0%
! AAAGAGAGGCTTCACCGGTT+AGG - chr4.1:1203777-1203796 MS.gene015611:intron 50.0%
! AAGAGAGGCTTCACCGGTTA+GGG - chr4.1:1203778-1203797 MS.gene015611:intron 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG + chr4.1:1206437-1206456 None:intergenic 50.0%
! GATGTGAAGTGTGCCGATAG+CGG - chr4.1:1207217-1207236 MS.gene015611:intron 50.0%
! GGATGGCAAGAGCATGAACA+TGG + chr4.1:1203460-1203479 None:intergenic 50.0%
! TGCACCGGTCATATTTGCTC+AGG - chr4.1:1203808-1203827 MS.gene015611:intron 50.0%
!! GAAAAGGTGCTTCCAACCTG+CGG + chr4.1:1206296-1206315 None:intergenic 50.0%
AAGGCCGCTACTTAGTGGAG+TGG - chr4.1:1203679-1203698 MS.gene015611:intron 55.0%
AGCCGATGTTGCCAAGTCAC+AGG - chr4.1:1204914-1204933 MS.gene015611:CDS 55.0%
CAATGGAGTAAACCGGAGGG+TGG - chr4.1:1207165-1207184 MS.gene015611:intron 55.0%
CATGGGTTTGTGGAGAGGAC+GGG - chr4.1:1206855-1206874 MS.gene015611:intron 55.0%
GACTGCTCAGGCATGTGGTA+AGG - chr4.1:1205292-1205311 MS.gene015611:CDS 55.0%
GAGCTCATTAAAGCGACCGC+AGG - chr4.1:1204122-1204141 MS.gene015611:CDS 55.0%
GATCTTCAGTGTGCGCCAAC+TGG - chr4.1:1206877-1206896 MS.gene015611:intron 55.0%
GATGGAGAGGACAGCGAATG+AGG - chr4.1:1207731-1207750 MS.gene015611:CDS 55.0%
GCAGAATCAGCACCACCCTT+TGG - chr4.1:1203205-1203224 MS.gene015611:CDS 55.0%
GCCACTGAGAGCTAGTATGG+TGG - chr4.1:1207021-1207040 MS.gene015611:CDS 55.0%
GCTTGGTCTGCTTCTACGCA+CGG - chr4.1:1205238-1205257 MS.gene015611:CDS 55.0%
GGGTTCTCATCATCTCGGTG+TGG - chr4.1:1204046-1204065 MS.gene015611:CDS 55.0%
GTCGAATTCGGGAGATGGAG+AGG - chr4.1:1207718-1207737 MS.gene015611:CDS 55.0%
TCCAATTTGGCGGTGCCTTC+TGG + chr4.1:1204758-1204777 None:intergenic 55.0%
TTTATAAGCCGGCCGCAGGT+TGG - chr4.1:1206281-1206300 MS.gene015611:CDS 55.0%
! CCCACCATACTAGCTCTCAG+TGG + chr4.1:1207025-1207044 None:intergenic 55.0%
!! ACCAGAAGGCACCGCCAAAT+TGG - chr4.1:1204754-1204773 MS.gene015611:CDS 55.0%
CGGCTAGGACCGCTTTCGAA+AGG - chr4.1:1203660-1203679 MS.gene015611:intron 60.0%
GCTCAGACTGCTCAGGCATG+TGG - chr4.1:1205287-1205306 MS.gene015611:CDS 60.0%
TCAGTGTGCGCCAACTGGAC+TGG - chr4.1:1206882-1206901 MS.gene015611:intron 60.0%
AGGTGCTTCCAACCTGCGGC+CGG + chr4.1:1206292-1206311 None:intergenic 65.0%
GTAAACCGGAGGGTGGCTGC+AGG - chr4.1:1207172-1207191 MS.gene015611:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 1203197 1207956 1203197 ID=MS.gene015611
chr4.1 mRNA 1203197 1207956 1203197 ID=MS.gene015611.t1;Parent=MS.gene015611
chr4.1 exon 1207627 1207956 1207627 ID=MS.gene015611.t1.exon1;Parent=MS.gene015611.t1
chr4.1 CDS 1207627 1207956 1207627 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1207279 1207512 1207279 ID=MS.gene015611.t1.exon2;Parent=MS.gene015611.t1
chr4.1 CDS 1207279 1207512 1207279 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1207009 1207178 1207009 ID=MS.gene015611.t1.exon3;Parent=MS.gene015611.t1
chr4.1 CDS 1207009 1207178 1207009 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1206499 1206717 1206499 ID=MS.gene015611.t1.exon4;Parent=MS.gene015611.t1
chr4.1 CDS 1206499 1206717 1206499 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1206218 1206404 1206218 ID=MS.gene015611.t1.exon5;Parent=MS.gene015611.t1
chr4.1 CDS 1206218 1206404 1206218 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1206067 1206118 1206067 ID=MS.gene015611.t1.exon6;Parent=MS.gene015611.t1
chr4.1 CDS 1206067 1206118 1206067 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1205690 1205919 1205690 ID=MS.gene015611.t1.exon7;Parent=MS.gene015611.t1
chr4.1 CDS 1205690 1205919 1205690 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1205459 1205557 1205459 ID=MS.gene015611.t1.exon8;Parent=MS.gene015611.t1
chr4.1 CDS 1205459 1205557 1205459 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1204601 1205316 1204601 ID=MS.gene015611.t1.exon9;Parent=MS.gene015611.t1
chr4.1 CDS 1204601 1205316 1204601 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1203833 1204336 1203833 ID=MS.gene015611.t1.exon10;Parent=MS.gene015611.t1
chr4.1 CDS 1203833 1204336 1203833 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
chr4.1 exon 1203197 1203449 1203197 ID=MS.gene015611.t1.exon11;Parent=MS.gene015611.t1
chr4.1 CDS 1203197 1203449 1203197 ID=cds.MS.gene015611.t1;Parent=MS.gene015611.t1
Gene Sequence

>MS.gene015611

ATGAAGATGCAGAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAGCAAACGGGGAACAAAAGATACACATTCATTCAAGCACATAGAGCTTGGCTTCTCAAATTAATGTTTCTATGGATTCTTCTGATGGCTCTGATTAGTCGTATCATCTACAGCAAAATGGACGTGGGTACTAAAGTGAGAAGGAAAGAGGTTTTGGGTAGTCTTTGTGATCAAAGGGCTAGAATGTTGCAAGACCAATTCAGTGTTAGTGTCAACCATGTTCATGCTCTTGCCATCCTTGTTTCAACTTTCCATTATTACAGAAACCCTTCTGCCATTGACCAGGTTTGTGCTTGAAAGTTTTGATCATTCTGTGTTGGAAATGAAAAATACTCAATCTTTGTTGTGTTTTTAAACCTTTATGTATCCTCTGATGATTATTTGATGATTTCCCTTCAGGAAACTTTTGCAGAATATACGGCTAGGACCGCTTTCGAAAGGCCGCTACTTAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCAGTTTGAGAAGCAGCATGGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACCGGTTAGGGATGAGTATGCACCGGTCATATTTGCTCAGGAAACTCTCTCTTACCTTGAGTCGATTGATATGATGTCTGGAGAGGTAAAGAACGACACTTGTGAACCATTCCACCGCTTGTTTTTTTTTTTTTTTTTGTGGAGAATTACTTTTATTACTACAATTTCTCATTTTTGCAATGCAGGAGGATCGAGAGAACATAATGAGAGCTAGAGCTACTGGGAAAGCTGTTCTGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTCCCTCACAACCCAACAACAGAAGAGCTCATTAAAGCGACCGCAGGGTATATCCTTATTTCACTAATTGTCAGCTTTTTGTTTTTAGAATCTTTTTTCTTATGTTTCATATGTGTAATTAGAGGATGAAGGTTGTGTTTAGTATAAAAATCTTACGTACATTATTAGCATTTTATTAAGCAGCAGTTAATCCGTCAATGCCACTATTAGTGTTATCGACACAGCTTCTATCATTGAGTTGAAGAAAACTGTTTCTGTTACAAGGCTTGTATTTGGTTATATTTTGTTGTAAGCATTTCAATAGAACATGTGATTAATGACTTTTTAATTGGAGGCAGATATGTTGGAGGATCCTTTGATGTGGAGTCACTTGTGGAAAATTTACTTGGTCAACTTGCTGGTCATCAAGCAATTTTGGTCAATGTATATGATGTCACGAACTCTACTGATCCCCTAATCATGTATGGCAACCAATACGAAGAAGGTGATGTTTCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAAACATCAAATGATATGTAGGTAGGTTCTTCTGGCTACTGTACATTACATTTTCTGGAACTGACTTTCGGCATTTTGTCAGCAGAAAGATGCTTATGATCAAACTTTTGTACAGGTATCACCAGAAGGCACCGCCAAATTGGACAGCACTTTCTACTGCAGTCCTATTCTTTGTGATTCTTCTATTAATCGGTTACATTTTATATGGTGCTGGGAATCATATTGTCAAAGTAGAGGATGATTTCCACGAAATGCAGGAGCTAAAAGTTCGAGCAGAGGCAGCCGATGTTGCCAAGTCACAGGTACTTTTCCTTGACATGTCGTTGGCACTTGGCATATTTCGATATTTCCTTTGATTACGCAACAATAACGAATACTGAAATTTTTGTTTTTTATGTCAGTTTCTAGCTACTGTCTCTCATGAAATTAGAACACCTATGAATGGCATTTTAGGTAACTCCAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTAAAATGTAACATATGCTTTCAAACCTTTCACTTTCTCATTAATAATGTTATCACAAAACAAAACTCTGTATGATTGTAGGAATGCTTGGTCTGCTTCTACGCACGGAATTGAACTCAACCCAACGTGACTATGCTCAGACTGCTCAGGCATGTGGTAAGGCTCTGATAGCATTAATAAATGAAGTGCTTGACCGAGCGAAAATTGAAGCTGGCAAATTAGAGCTGGAAGCGGTTCCATTTGACCTTCGTTCCATACTCGATGATGTCCTCTCTCTTTTTTCAGAGAAGTCTAGACACAAAGGTTTAGAGGTATGCTCAAATCGTTGCTAAACCTATTGTGAAGGCCAATACGAGTTTCATAATAATATCTTAATTTGGTTTCCTCTCTTTATTTGATGATCTAACTTCATTATCCTTTTTTTTTCATTTTACCTTTCTTAGCTGGCAGTGTTCGTTTCTGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATTGTAACAAATCTTGTTGGCAACTCTGTTAAAGTAAGTGGAATTTTCAAATTTTATTTGCCTAAAGTTATTTGCATTACTAATATGCATGTTATGTTGGAAATGTTTGAAATTTTGCTGTTGTATAGCAAGATACTTGTTGCTTACATTTCTGTTTAACTTCAATATACTGCAGTTCACTGAGCGAGGCCATATATTTGTTAAAGTTCATTTATCCGAAAACAGAAAGCCCGCAACAAATGGAAAGCTTGAGACTTATCGAAATGGAGGGTCTGAAGAAGTTGTGCATGCATCTAGCGGTTATAATCTCAAAACGCTAAGTGGATATGAAGCTGCTGATGAACGCAACAACTGGGATAATTTTAACCACCTAATTGCTGATGAAGAGTTTTTCTGCGATGCTTCAACTAAAAAAGTGGCCTCGAATGAATTTTATGAACAAGTCACCTTGATGGTCTGTGTCGAAGACACTGGAATTGGAATTCCTTTCTCGGCCCAAGATAGGATTTTCATGCCTTTTGTTCAGGCAGATAGCTCGACTTCTAGAAATTATGGTGGTACCGGCATTGGTTTGAGTATCAGTAAGTGCCTAGTTGAACTAATGGGTGGTCAAATAAACTTTATAAGCCGGCCGCAGGTTGGAAGCACCTTTTCATTTACCGCGGATTTTGGAATATTTAAGAAGAATCCAATAACTGAGGTGAAGAAGGTTAACTATGAAGATCTACCATCCAGTTTTAGAGGGCTTAAAGCCGTTGTGGTTGATGGGAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTTGGGATACAAGCTAAAGTCGCAAATGCCATCAATAAGGCTGTTTCCTTGTGTGGGAAAAATGGTGCTTCCAGCACAGGGTAAGTTTTTAAGTTTCCTTTTTGTAATTAATGCATTGCTATTTTTAGTGAACTAATGTTAGGACTATGTGTGTTTAATCATAATTCCATCTAAAGTCACACATGAATCATGATAGGCTGTGACTTGCTGACAGTGTAAAACGTATAAAACATTATACACTAACAATGTATCAAAATTAAACTCTTTGAAGAATTGCATTTGTTCTTGTTGTGTGGTTCAATACTTGAGTTCATTAACTGAGTTAAAATATTTGGTTGTGGCAGGTTATTCCAGCCTGATATTATTTTTGTTGAGAAGGATTCATGGGTTTGTGGAGAGGACGGGATCTTCAGTGTGCGCCAACTGGACTGGAAACAGAATGGACATATATTTAAGATGCCTCAAATGATCCTTCTAGCTACGAATATTAGTAATGACGAATTTGATAAAGCTAAATCCGCAGGTTTTAGTGATACGGTGATCATGAAGCCACTGAGAGCTAGTATGGTGGGAGCTTGCCTTCAGCAAGTTTTGGGAACAGGCAAGAAGAGACAGCTGGGAAAAGAGTCGCCTAATGGTTCAACTTCAGTTCGAAGCCTTCTGTTCGGAAAGAAAATTTTAGTGGTTGATGACAATGGAGTAAACCGGAGGGTGGCTGCAGGCGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCCGATAGCGGCAAAGCTGCTCTTGAAATGCTTCAATTCCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTATGTTTGTTCGCATCGATTATTAAATTTTTTTTTGGTATTATTTGAACATAACATGTTAACATGATAGTTGCATTGCTGATAAAAAAAACTACTTGCACAAGTTGAATGCAAGTTACGTGACAGTTGCCTTGCTGATAAATTCAATGATATGTACGTAAGTTGAATGCACGTAACTTGCATGTTGGCTATACTAATTCACATTGAAATTATTTTGTTTGTATATAAACTCTATTTACACATGTTATTTATGTTCTAATTCACATCCATACTATATTTGTTTGTATATAAACCTTATCTATACATGTTATGTGTGTTCTAATTCACATGAATATTATTTTTACACATGTTTTTTATAAATCATGTACTAACATTATTTTCAGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACAGCGAATGAGGAGACGAATGGTGAATGTGGTGAAAGGAAAAGTGAATTCCATTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGAGAATCTTTATCAAGCAGTTGCCAAGTTTTTCCAGACAAAACCTATTTCAGTAGATTCATGA
Protein sequence

>MS.gene015611.t1

MKMQNQHHPLASKLQEQTGNKRYTFIQAHRAWLLKLMFLWILLMALISRIIYSKMDVGTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREQFEKQHGVVIKTMEREASPVRDEYAPVIFAQETLSYLESIDMMSGEEDRENIMRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPHNPTTEELIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDVTNSTDPLIMYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAVLFFVILLLIGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPATNGKLETYRNGGSEEVVHASSGYNLKTLSGYEAADERNNWDNFNHLIADEEFFCDASTKKVASNEFYEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTADFGIFKKNPITEVKKVNYEDLPSSFRGLKAVVVDGKPVRAAVTRYHLKRLGIQAKVANAINKAVSLCGKNGASSTGLFQPDIIFVEKDSWVCGEDGIFSVRQLDWKQNGHIFKMPQMILLATNISNDEFDKAKSAGFSDTVIMKPLRASMVGACLQQVLGTGKKRQLGKESPNGSTSVRSLLFGKKILVVDDNGVNRRVAAGALKNFGADVKCADSGKAALEMLQFPHNFDACFMDIQMPEMDGFEATRRIREMERTANEETNGECGERKSEFHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFQTKPISVDS