AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015696.t1 MTR_4g120810 96.423 671 14 3 1 669 1 663 0.0 1329
MS.gene015696.t1 MTR_8g104740 95.394 673 19 3 1 669 1 665 0.0 1319
MS.gene015696.t1 MTR_4g120810 95.987 598 14 3 1 596 1 590 0.0 1181
MS.gene015696.t1 MTR_8g104740 95.000 600 18 3 1 596 1 592 0.0 1167
MS.gene015696.t1 MTR_1g113700 85.691 622 62 3 57 669 6 609 0.0 1080
MS.gene015696.t1 MTR_4g052070 78.274 672 114 7 1 669 1 643 0.0 1046
MS.gene015696.t1 MTR_8g104740 98.675 453 6 0 217 669 1 453 0.0 933
MS.gene015696.t1 MTR_8g104740 99.042 313 3 0 284 596 1 313 0.0 650
MS.gene015696.t1 MTR_8g007295 24.658 292 182 9 71 345 83 353 1.21e-17 86.7
MS.gene015696.t1 MTR_8g007295 24.658 292 182 9 71 345 83 353 1.37e-17 87.0
MS.gene015696.t1 MTR_4g127770 25.694 144 105 2 201 343 728 870 1.10e-11 68.9
MS.gene015696.t1 MTR_4g127770 26.531 147 100 3 201 343 241 383 2.67e-11 67.4
MS.gene015696.t1 MTR_4g127790 25.694 144 105 2 201 343 39 181 1.75e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015696.t1 AT4G33760 78.428 598 125 1 72 669 70 663 0.0 1015
MS.gene015696.t1 AT4G33760 78.154 531 112 1 139 669 1 527 0.0 896
MS.gene015696.t1 AT3G13490 23.913 276 192 7 72 345 116 375 1.30e-14 77.8
MS.gene015696.t1 AT4G26870 27.950 322 173 11 84 362 79 384 3.59e-11 66.6
MS.gene015696.t1 AT3G11710 26.163 172 121 3 179 345 233 403 4.95e-11 66.2

Find 168 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGACATCGTTGGAAGTTAAT+TGG 0.230061 4.2:-1777572 None:intergenic
AATTAAAGTTGGAATGGTTT+TGG 0.232428 4.2:-1777406 None:intergenic
GTTTATGTGGCTCATGAATT+AGG 0.251279 4.2:+1782569 MS.gene015696:CDS
TCGTCAAAGGTAATGCTTTA+AGG 0.270505 4.2:-1777341 None:intergenic
TTCCTCTTTAAGAGAATCTT+TGG 0.271786 4.2:-1777910 None:intergenic
TTCTGCTTTAGTATCAAGTA+TGG 0.291029 4.2:+1782433 MS.gene015696:CDS
GCAAGGTTGTTCATGTCTTC+AGG 0.297939 4.2:-1782912 None:intergenic
TTTCAGGCTGAAGCTAAGTT+TGG 0.318198 4.2:+1784543 MS.gene015696:intron
TCTAGATCAAATCTGGTATC+TGG 0.318832 4.2:-1781901 None:intergenic
TTGCCATTCAAGGTGTTGTT+AGG 0.321014 4.2:+1777760 MS.gene015696:CDS
TTGTTCATGTCTTCAGGATT+TGG 0.324171 4.2:-1782906 None:intergenic
AAATAATCCCGGGCACCTTC+TGG 0.327607 4.2:-1780036 None:intergenic
TTTCTCAGGGTCTTCCTTCA+AGG 0.336742 4.2:+1782125 MS.gene015696:CDS
AACACTTCCAGATGAATTTC+CGG 0.336916 4.2:+1777695 MS.gene015696:CDS
CAACTAGAGAGGATTTATTA+AGG 0.343846 4.2:+1782462 MS.gene015696:CDS
GGTATCGATATCTTGATCTA+AGG 0.345062 4.2:+1779781 MS.gene015696:intron
TTCTTGTTGATTGATTGATT+TGG 0.350211 4.2:-1777789 None:intergenic
AGACCATACCGGCATTGTTC+AGG 0.353786 4.2:+1777668 MS.gene015696:CDS
TGAAAGATCTTTCAGCTGTT+GGG 0.361402 4.2:-1785433 None:intergenic
AAAGTAATTTGTGTACCTTC+TGG 0.364160 4.2:+1782183 MS.gene015696:CDS
AATGCAGGAGGCATAGCTTT+TGG 0.364469 4.2:+1785294 MS.gene015696:intron
TGCAATCAATAACCTTAGAT+TGG 0.370097 4.2:+1777728 MS.gene015696:CDS
CTAAATACCTGGATTCTTGA+TGG 0.371339 4.2:-1780063 None:intergenic
CGACATACAACAAAAGGTTT+TGG 0.374977 4.2:+1783111 MS.gene015696:CDS
CTGGTTGTGGAAATTAAAGT+TGG 0.387880 4.2:-1777417 None:intergenic
CAACCACATACTCCAATCTA+AGG 0.390109 4.2:-1777740 None:intergenic
GCTATTTAAGCAAATGCTAA+TGG 0.395004 4.2:+1780717 MS.gene015696:CDS
ATCAACAAGAAGATGAAAAC+TGG 0.395189 4.2:+1777801 MS.gene015696:CDS
GGCAAAACTGTTCGTCTTTG+TGG 0.398786 4.2:+1777594 MS.gene015696:CDS
AGATTGGTTATGTTGCTAGC+TGG 0.406190 4.2:+1785324 MS.gene015696:CDS
GATTGGTTATGTTGCTAGCT+GGG 0.406860 4.2:+1785325 MS.gene015696:CDS
CTAGAGAGAAAGAAAATTGA+TGG 0.416674 4.2:-1777378 None:intergenic
TGCTTCAGCATATGTAAGCC+TGG 0.420918 4.2:-1781854 None:intergenic
GCTGAAGCAATGAATAGATA+TGG 0.425444 4.2:+1781868 MS.gene015696:CDS
AATCCACAAAATTGAATGTC+TGG 0.427154 4.2:-1782703 None:intergenic
TAAACGCGACATACAACAAA+AGG 0.428071 4.2:+1783105 MS.gene015696:CDS
TGAGTTCACACAACTAGATA+TGG 0.428133 4.2:+1781385 MS.gene015696:CDS
AAGGGATTCGTTGAGTGGTT+TGG 0.431189 4.2:-1777520 None:intergenic
TTGAAAGATCTTTCAGCTGT+TGG 0.431611 4.2:-1785434 None:intergenic
TTAAATAGCTGAGGGCTTTG+TGG 0.433840 4.2:-1780703 None:intergenic
TAGCTGGGGCTAATTCAATC+AGG 0.434319 4.2:+1785340 MS.gene015696:CDS
CATTGAGATTGCTGCAAATG+AGG 0.438443 4.2:+1777827 MS.gene015696:CDS
CCTTGCATCGGCTCGTGCAT+TGG 0.439535 4.2:+1782929 MS.gene015696:CDS
GTAAGCCTGGGGAAAGGGTT+TGG 0.441264 4.2:-1781841 None:intergenic
AAACTGTTCGTCTTTGTGGA+TGG 0.443016 4.2:+1777598 MS.gene015696:CDS
GAATCATTCCACTCAAACAT+TGG 0.443454 4.2:-1782735 None:intergenic
TTATTAAGGCGATGCTCTGC+AGG 0.444994 4.2:+1782476 MS.gene015696:CDS
AATGTTTGAGTGGAATGATT+CGG 0.449218 4.2:+1782737 MS.gene015696:CDS
TGCGCAACCGGAAATTCATC+TGG 0.450378 4.2:-1777702 None:intergenic
AGAGGAAAGGGTTCTGGTTG+TGG 0.451123 4.2:-1777430 None:intergenic
TTATACTTTGTCAGATTGGC+GGG 0.451733 4.2:+1783065 MS.gene015696:intron
CACTCAACGAATCCCTTCAA+TGG 0.452205 4.2:+1777526 MS.gene015696:CDS
TTGATTGCAGAATGCGCAAC+CGG 0.452729 4.2:-1777714 None:intergenic
TACAACGAAGCACACAAATC+TGG 0.457051 4.2:+1782261 MS.gene015696:CDS
AGGCCTAACAACACCTTGAA+TGG 0.458898 4.2:-1777763 None:intergenic
TTCGTTGAGTGGTTTGGCAG+TGG 0.459133 4.2:-1777514 None:intergenic
TTTCTCAAGATCACGGAGAA+TGG 0.463469 4.2:+1782300 MS.gene015696:CDS
CGTGGAACACTTACCTCAAT+CGG 0.464305 4.2:-1777935 None:intergenic
TCTTAAGAAACCTGGTGCAC+AGG 0.464845 4.2:+1782230 MS.gene015696:CDS
AAGCAAATGCTAATGGTAGC+TGG 0.467850 4.2:+1780724 MS.gene015696:CDS
CATATGTAAGCCTGGGGAAA+GGG 0.478597 4.2:-1781846 None:intergenic
AACTGTTCGTCTTTGTGGAT+GGG 0.478967 4.2:+1777599 MS.gene015696:CDS
CTTATGACATGGTTTACAAT+GGG 0.479877 4.2:+1782952 MS.gene015696:CDS
GATCCACACCAGAAGGTGCC+CGG 0.482589 4.2:+1780028 MS.gene015696:CDS
AAATTGATGGGGTGCGTCGA+AGG 0.489063 4.2:-1777365 None:intergenic
CATTGAAGGGATTCGTTGAG+TGG 0.489601 4.2:-1777525 None:intergenic
TTTAGTTCCATCAAGAATCC+AGG 0.490512 4.2:+1780056 MS.gene015696:CDS
AAGAGAATCTTTGGCATCAT+CGG 0.497970 4.2:-1777901 None:intergenic
AGCAATGAATAGATATGGTT+CGG 0.498070 4.2:+1781873 MS.gene015696:CDS
GAAAGATCTTTCAGCTGTTG+GGG 0.499570 4.2:-1785432 None:intergenic
AGAAACAGAGGAAAGGGTTC+TGG 0.500167 4.2:-1777436 None:intergenic
TGCCAAAGATTCTCTTAAAG+AGG 0.500755 4.2:+1777908 MS.gene015696:CDS
ACTCAACGAATCCCTTCAAT+GGG 0.501431 4.2:+1777527 MS.gene015696:CDS
TTCTTGAAGCTCTTGACATG+GGG 0.505034 4.2:+1784571 MS.gene015696:CDS
TAAATACCACCCTGTGCACC+AGG 0.505577 4.2:-1782240 None:intergenic
GCACACAAATCTGGTGCAAA+GGG 0.506073 4.2:+1782270 MS.gene015696:CDS
TGAAGCAGAAACAGAGGAAA+GGG 0.506946 4.2:-1777442 None:intergenic
GAGTATGTGGTTGCCATTCA+AGG 0.511957 4.2:+1777750 MS.gene015696:CDS
GAGTTCTTGAAACCCATTGA+AGG 0.515807 4.2:-1777539 None:intergenic
TAGAGAGAAAGAAAATTGAT+GGG 0.516501 4.2:-1777377 None:intergenic
TTCTCTGATTCCTTGGAGTG+TGG 0.517839 4.2:+1782150 MS.gene015696:CDS
GGAGACTGTAGGCATCTCAA+TGG 0.520526 4.2:+1783132 MS.gene015696:CDS
TAACCTTAGATTGGAGTATG+TGG 0.520626 4.2:+1777737 MS.gene015696:CDS
GGAATCAGAGAAAACCTTGA+AGG 0.521670 4.2:-1782139 None:intergenic
TCAGGATTTGGTGCAGTGAA+AGG 0.522281 4.2:-1782894 None:intergenic
TAATGAAGAGTTGATCAGAA+AGG 0.523027 4.2:+1781445 MS.gene015696:CDS
TCGTGCATTGGCTTATGACA+TGG 0.525618 4.2:+1782941 MS.gene015696:CDS
ATTATACTTTGTCAGATTGG+CGG 0.527189 4.2:+1783064 MS.gene015696:intron
GGTGTGGATCTTGACAGTAT+TGG 0.527300 4.2:-1780015 None:intergenic
TTCTCCGTGATCTTGAGAAA+AGG 0.528267 4.2:-1782297 None:intergenic
AGAGACAACATATCCTCTAA+AGG 0.530071 4.2:-1781422 None:intergenic
AGCATTTGCTTAAATAGCTG+AGG 0.531601 4.2:-1780712 None:intergenic
AGATCGTCTTAGAGTTTATG+TGG 0.532962 4.2:+1782556 MS.gene015696:CDS
GCATATGTAAGCCTGGGGAA+AGG 0.533395 4.2:-1781847 None:intergenic
TAACCTGAACAATGCCGGTA+TGG 0.533768 4.2:-1777671 None:intergenic
GCTTCAGCATATGTAAGCCT+GGG 0.534696 4.2:-1781853 None:intergenic
TCGGTTGTAGTAACTAAGAA+TGG 0.534853 4.2:-1777882 None:intergenic
GCTTATGACATGGTTTACAA+TGG 0.535736 4.2:+1782951 MS.gene015696:CDS
TGTGGAAATTAAAGTTGGAA+TGG 0.536332 4.2:-1777412 None:intergenic
CAATTAACTTCCAACGATGT+CGG 0.540000 4.2:+1777573 MS.gene015696:CDS
AGCACACAAATCTGGTGCAA+AGG 0.540341 4.2:+1782269 MS.gene015696:CDS
CTTCTTGAAGCTCTTGACAT+GGG 0.540430 4.2:+1784570 MS.gene015696:CDS
AATTCAGTTCTTAAGAAACC+TGG 0.540659 4.2:+1782222 MS.gene015696:CDS
GTTTCTGTTTCAGAAGGAAG+TGG 0.543539 4.2:-1777483 None:intergenic
TGTAGGCATCTCAATGGAGC+AGG 0.544534 4.2:+1783138 MS.gene015696:CDS
TTGATGGAACTAAATAATCC+CGG 0.544592 4.2:-1780047 None:intergenic
TCTGATTCCTTGGAGTGTGG+TGG 0.548275 4.2:+1782153 MS.gene015696:CDS
AATTACCAAACCCTTTCCCC+AGG 0.550475 4.2:+1781836 MS.gene015696:CDS
GCAAATAAAATCAGATCACT+TGG 0.551349 4.2:-1782500 None:intergenic
AGTTCTTGAAACCCATTGAA+GGG 0.554892 4.2:-1777538 None:intergenic
ATGGTCTCTAAGATTGAGAA+AGG 0.555297 4.2:-1777652 None:intergenic
TAGCTGAGGGCTTTGTGGCA+AGG 0.556212 4.2:-1780698 None:intergenic
ATGAGAGTTTCTGTTTCAGA+AGG 0.556345 4.2:-1777489 None:intergenic
CTCAATCTTAGAGACCATAC+CGG 0.558715 4.2:+1777657 MS.gene015696:CDS
ATAAATATTATCAAGTAGCA+AGG 0.559397 4.2:+1780752 MS.gene015696:CDS
CTTAAGAAACCTGGTGCACA+GGG 0.560030 4.2:+1782231 MS.gene015696:CDS
GCATTTGCTTAAATAGCTGA+GGG 0.564155 4.2:-1780711 None:intergenic
ATCCCGGGCACCTTCTGGTG+TGG 0.564930 4.2:-1780031 None:intergenic
ATCCACACCAGAAGGTGCCC+GGG 0.566710 4.2:+1780029 MS.gene015696:CDS
CCGACTTTCCAATGTTTGAG+TGG 0.567755 4.2:+1782727 MS.gene015696:CDS
CCAATGCACGAGCCGATGCA+AGG 0.567886 4.2:-1782929 None:intergenic
CCACTCAAACATTGGAAAGT+CGG 0.571037 4.2:-1782727 None:intergenic
TTAAAGAGGAAGTCCGATTG+AGG 0.573366 4.2:+1777922 MS.gene015696:CDS
CAGCTGTTGGGGATCCACCT+CGG 0.573724 4.2:-1785421 None:intergenic
AATTGATGGGGTGCGTCGAA+GGG 0.576335 4.2:-1777364 None:intergenic
ATATCTAGTTGTGTGAACTC+AGG 0.578660 4.2:-1781383 None:intergenic
TGTTGTAACCTGAACAATGC+CGG 0.579719 4.2:-1777676 None:intergenic
ATACTTTGTCAGATTGGCGG+GGG 0.581028 4.2:+1783067 MS.gene015696:intron
TGACATGGTTTACAATGGGG+TGG 0.585116 4.2:+1782956 MS.gene015696:CDS
TTGAAGCAGAAACAGAGGAA+AGG 0.587552 4.2:-1777443 None:intergenic
CATGGTTTACAATGGGGTGG+AGG 0.588103 4.2:+1782959 MS.gene015696:CDS
AATAACACCACCACACTCCA+AGG 0.592452 4.2:-1782160 None:intergenic
TCTTCTTGAAGCTCTTGACA+TGG 0.595100 4.2:+1784569 MS.gene015696:CDS
AGTGGAATGATTCGGAGCAG+AGG 0.597352 4.2:+1782745 MS.gene015696:CDS
CCTCGGAAGGTGATCTCGTG+AGG 0.598148 4.2:-1785404 None:intergenic
TCTGTTTCAGAAGGAAGTGG+TGG 0.602903 4.2:-1777480 None:intergenic
CTGTCAAGATCCACACCAGA+AGG 0.603413 4.2:+1780021 MS.gene015696:CDS
TTGATTGATTGATTTGGACG+AGG 0.603430 4.2:-1777783 None:intergenic
TGTTGGGGATCCACCTCGGA+AGG 0.606271 4.2:-1785417 None:intergenic
ATTGGTTATGTTGCTAGCTG+GGG 0.606846 4.2:+1785326 MS.gene015696:CDS
CACGAGATCACCTTCCGAGG+TGG 0.609144 4.2:+1785407 MS.gene015696:CDS
AGCTGGGGCTAATTCAATCA+GGG 0.612567 4.2:+1785341 MS.gene015696:CDS
TGATGGAACTAAATAATCCC+GGG 0.612782 4.2:-1780046 None:intergenic
ATCGATATCTTGATCTAAGG+AGG 0.613730 4.2:+1779784 MS.gene015696:CDS
GTGCGTCGAAGGGTCGTCAA+AGG 0.615765 4.2:-1777354 None:intergenic
TCTTGAAGCTCTTGACATGG+GGG 0.620703 4.2:+1784572 MS.gene015696:CDS
TATGGATTCTGCAACTAGAG+AGG 0.622469 4.2:+1782451 MS.gene015696:CDS
TATACTTTGTCAGATTGGCG+GGG 0.624951 4.2:+1783066 MS.gene015696:intron
CATGTTGCTGCGGCATAATG+TGG 0.628032 4.2:+1779824 MS.gene015696:CDS
TGATTCGGAGCAGAGGCTTG+AGG 0.628865 4.2:+1782752 MS.gene015696:CDS
CACACAACTAGATATGGAGA+TGG 0.630880 4.2:+1781391 MS.gene015696:CDS
AGACATGAACAACCTTGCAT+CGG 0.632479 4.2:+1782917 MS.gene015696:CDS
CTCGGAAGGTGATCTCGTGA+GGG 0.643918 4.2:-1785403 None:intergenic
TTGTATTGAAGCAGAAACAG+AGG 0.644634 4.2:-1777448 None:intergenic
TTAGAAGACTTACCATGTGG+CGG 0.647061 4.2:-1784597 None:intergenic
CCTCACGAGATCACCTTCCG+AGG 0.653984 4.2:+1785404 MS.gene015696:CDS
GTTGCACTTCACAGAGTCCA+CGG 0.658925 4.2:+1777621 MS.gene015696:CDS
TACTTTGTCAGATTGGCGGG+GGG 0.661761 4.2:+1783068 MS.gene015696:intron
GATCAAATCTGGTATCTGGA+CGG 0.664712 4.2:-1781897 None:intergenic
TGAATTCTAACATGTTGCTG+CGG 0.674898 4.2:+1779814 MS.gene015696:CDS
AGATATCTAGAAGACATACA+TGG 0.678657 4.2:+1779861 MS.gene015696:CDS
CTTCAGCATATGTAAGCCTG+GGG 0.689625 4.2:-1781852 None:intergenic
AAGAAACCTGGTGCACAGGG+TGG 0.690711 4.2:+1782234 MS.gene015696:CDS
GTTTCAAGAACTCATCATTG+CGG 0.693107 4.2:+1777549 MS.gene015696:CDS
AGAGAGAAAGAAAATTGATG+GGG 0.704931 4.2:-1777376 None:intergenic
TTATGACATGGTTTACAATG+GGG 0.724188 4.2:+1782953 MS.gene015696:CDS
TGAGAAAGGTGAGTCCACCG+TGG 0.751901 4.2:-1777638 None:intergenic
GCACTTCACAGAGTCCACGG+TGG 0.824126 4.2:+1777624 MS.gene015696:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 1777327 1785467 1777327 ID=MS.gene015696
chr4.2 mRNA 1777327 1785467 1777327 ID=MS.gene015696.t1;Parent=MS.gene015696
chr4.2 exon 1777327 1777943 1777327 ID=MS.gene015696.t1.exon1;Parent=MS.gene015696.t1
chr4.2 CDS 1777327 1777943 1777327 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1779782 1779893 1779782 ID=MS.gene015696.t1.exon2;Parent=MS.gene015696.t1
chr4.2 CDS 1779782 1779893 1779782 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1780006 1780077 1780006 ID=MS.gene015696.t1.exon3;Parent=MS.gene015696.t1
chr4.2 CDS 1780006 1780077 1780006 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1780682 1780773 1780682 ID=MS.gene015696.t1.exon4;Parent=MS.gene015696.t1
chr4.2 CDS 1780682 1780773 1780682 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1781346 1781466 1781346 ID=MS.gene015696.t1.exon5;Parent=MS.gene015696.t1
chr4.2 CDS 1781346 1781466 1781346 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1781811 1781933 1781811 ID=MS.gene015696.t1.exon6;Parent=MS.gene015696.t1
chr4.2 CDS 1781811 1781933 1781811 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1782114 1782321 1782114 ID=MS.gene015696.t1.exon7;Parent=MS.gene015696.t1
chr4.2 CDS 1782114 1782321 1782114 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1782417 1782604 1782417 ID=MS.gene015696.t1.exon8;Parent=MS.gene015696.t1
chr4.2 CDS 1782417 1782604 1782417 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1782702 1782773 1782702 ID=MS.gene015696.t1.exon9;Parent=MS.gene015696.t1
chr4.2 CDS 1782702 1782773 1782702 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1782882 1782980 1782882 ID=MS.gene015696.t1.exon10;Parent=MS.gene015696.t1
chr4.2 CDS 1782882 1782980 1782882 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1783079 1783159 1783079 ID=MS.gene015696.t1.exon11;Parent=MS.gene015696.t1
chr4.2 CDS 1783079 1783159 1783079 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1784549 1784606 1784549 ID=MS.gene015696.t1.exon12;Parent=MS.gene015696.t1
chr4.2 CDS 1784549 1784606 1784549 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
chr4.2 exon 1785301 1785467 1785301 ID=MS.gene015696.t1.exon13;Parent=MS.gene015696.t1
chr4.2 CDS 1785301 1785467 1785301 ID=cds.MS.gene015696.t1;Parent=MS.gene015696.t1
Gene Sequence

>MS.gene015696

ATGTCGTCTCTATTCCTTAAAGCATTACCTTTGACGACCCTTCGACGCACCCCATCAATTTTCTTTCTCTCTAGACTTTCCAAAACCATTCCAACTTTAATTTCCACAACCAGAACCCTTTCCTCTGTTTCTGCTTCAATACAACAACAACAACCACCACTTCCTTCTGAAACAGAAACTCTCATTTCCACTGCCAAACCACTCAACGAATCCCTTCAATGGGTTTCAAGAACTCATCATTGCGGCCAATTAACTTCCAACGATGTCGGCAAAACTGTTCGTCTTTGTGGATGGGTTGCACTTCACAGAGTCCACGGTGGACTCACCTTTCTCAATCTTAGAGACCATACCGGCATTGTTCAGGTTACAACACTTCCAGATGAATTTCCGGTTGCGCATTCTGCAATCAATAACCTTAGATTGGAGTATGTGGTTGCCATTCAAGGTGTTGTTAGGCCTCGTCCAAATCAATCAATCAACAAGAAGATGAAAACTGGCTTCATTGAGATTGCTGCAAATGAGGTTCAACTGTTAAATTCTGTCAATGCAAAGTTACCATTCTTAGTTACTACAACCGATGATGCCAAAGATTCTCTTAAAGAGGAAGTCCGATTGAGGTAAGTGTTCCACGCTACTTGTCATTGCTTATTTATATTCATGTTTGTTGGTTTCTCATAGAAGTTACAATCTCACTAGTTTTAGGTTTTATTGTTTTTTCTATCAATGCTATTCTCCATGTTTGCATGTTATTAAGTCTTTTATTTACTAAATTTCGTTTCATACTTATCGTTAATTTTAGTTCAAATGCGAGAATTTTGTGCCGAGCCTATCACAATTTTCCGTACTATGCAAGTGTTTTAGTTTTAGATTCGTAGGTTAAAACTATAGTGGAGAAAAATTCCAAAACATAGAGACATGTAATATTAACAACTTCTATTTCTGGCTTCATAAGGCAAACATAGTTTAATCAACTGAGGGTAGGCAAACATATGCCAAAGCAAAACAAAGTAGAAATGTCAAAATCCATATTTTATTGCAGAACAAAAGTTGTAGGGTCTCTTTGGATAGAGGGGTTAGGAGGGGAGGACTTCCTTTTCTTTTTTAAATTATGAACACTATAAACTGTTTTTTTAAATCAATTAAGTGTGATTGAACCATTATTATATGATCATCAATCATGATGTTCTTTTACTTTTTTAAACATGGCAAATATATATCAAAATATAGACTTAGCCCGCCAACACCCCCCCCCCCCCCCCCCCTCTCCCTCCCAAACAGACCCTTAGAAAAATTCAACATTATTGCTATTCACCAAGCATCATATGATGCTCATTATTAGACCACAATGTTTGTTAATAGTGCTTTCTAATGCTTTAGCTCTGCATTAGGTAGTTTACATGGAGGAGAAAGAGTTTCTAATTGATAGCCTTCAAAGTTCTAATCAGATTTTAGTCTAACACAGCCCTTATTTATTCTCAATCTTGTGATCTAGTGCTATTCATCCTTTACTGCCATGACTTTGAGCTAGTGTTGCACAATAGTTATTCAATTATTACATTAGTCTTGTACCCTAAAAAAAAGTCATCATTAATTGATTATTTTACCCTCCGAAAACATAAACAGCAAGGCATTTGGAAAAATATACATTAGTTCAACACCGACTGATGCAACAAAATGCAGCGCAGATCAATTTAAAATATTACAATACTAGAAATTAAATTAGAACTATTGAAGGTCCACGGGTCTGGGCTGTTCCGGTCTTCAATCAGCATACTGTCACGGTTTTTCACTGGTAAGACCAGCATTCTGTCATTGTTTTTCATGGTATCCTTTGTTGAAATCTGTAATGTCTAGGTTTTGTAAGGCATGTCCTTGCTTTGTAAGGTATTCATATCTAGGTGGAAGCTGTGATGAGTTTTTATTTTTGAAGCTTGAAATCGAGTTTTAAAGTGGAGAATTTCTTACTGTTTCAAGTTTTGGTGAAGTCTGTTAGTTATTCTGGTGGGAGGCTTTTCTTTGGTTTTATGAGTTAGGTGCGAAGGAGTTAGGTACATTTTTAGCCTGTTCGGGTATTGCCTTGTGTGCCTACTGCTGGAAATTTTGCTTGTGGGGATTTGTTCTTGGTTTTGTCTGTTCTGTGTCCAGCTTGCCTCCTTGGTTGGCTTTTGTTTGTATTGTTTCATCCTAGTACATCTCGTGCGTGAGTGTGGTTTTAGTATAAGTTGCTCTATAACTGCTTTTGGTATTATTTTTTTTTTTACCAAATGACTGCTTTTGGTATTAATTCCTCATTTGATTGTAAAATTATGCTATTTTATCAAGTTTAATGATGTGGTTGAATGTTCTGCTGACACATGTTTGATTGTGGTTGATGTTTTCATTTGTCTTACCTCCAATTGTAATTTATTGACGAGATGAGATGAGAGATTTATTGCTTACAATTAAGAATTTTTAGGTATCGATATCTTGATCTAAGGAGGCAACAAATGAATTCTAACATGTTGCTGCGGCATAATGTGGTTAAACTCATGCGAAGATATCTAGAAGACATACATGGTTTTGTGGAGGTACTATCCAGTAGGTTCATCATTTGAATTTTTGAGTCTATTGCACATCGTACTTCGGTTGTTGGTATTTGGTATCCTGTGTTGATCTTTACCTTTTTTGTTCACAAGGTAGATTGAAACTCCAATACTGTCAAGATCCACACCAGAAGGTGCCCGGGATTATTTAGTTCCATCAAGAATCCAGGTATTTAGATTTTTTCACCTATTGCATGGGATTGTTATTTCATTATATTTGTCTAACATTTTACTAGTCTTTCTTTCTCTTTGTTTGGTATGGATTTTAGTTACAATAGAGCAAATAAGTCGACAGACTTTAAAAATATTGGTCTCGTCAGAAGTTCATCCAGGCAATTAGATTTATCTTTTGCATAATCAGATCAATTAATTGTTTTTTCAAACGCTCAATTGGATATTGCGATGTTGAATTTAGTAGTTGACAGGATTTATGATCCCAGCTTCAAAAGATATTTACTACCTATACCTCAATGGCATTAATGTAGAACGTATGCAGATTTGCCTTGTGCATGTGCGCACAAAGGACATTCCTTTTATATATATCTGTTGTGTTTTGACTGTGTAGAAATGATTGCAAAAATTGTAGTCTTTTCCCATAAGTAAGTTTGTATCATGGCACTGAATTTTTATTTTATTTTATTTTATTGGATTGGCATAACATCTTTTATGAGAAGAGCATTGCTAAGATGAAAAGCAATATGAATGTTTTATCTATTTTTTAAGAGATGTAATTTATTTTACGTTTTGTTGATTCTGTCACATGAATTACGAAGCGAGGAACATTCTATGCCTTGCCACAAAGCCCTCAGCTATTTAAGCAAATGCTAATGGTAGCTGGTTTTGATAAATATTATCAAGTAGCAAGGTATAATATTCTTTTATTTTTGGCAAAATTACACAATTAGTCCCTTAACTTTATTTTAGGTAACACTTTTGTCCTTTATCTTTTTTTTGTCACGATTTAGTTCCTTATGTTATAAAATGACAACATCTTATCATTTTTTATGAGATTTTTTTCAAAGAAATTTGATTTTCTAGGCTTGTATGATGAAGATTTGCGTTTGTCTATGAGTTTGATGAATTTTTTTTGGAGTTTTTGATTATTTTTTTCATAAAAAAGGATAACTATGTTGTTATTTTATAACATAAAAAAGATAAAGGACGAAAGTGTTACCTAAAATTAAATTAAGGGACTAATTGTGTAATTTTGCCTTTATTTTTTATTTATTTTGAGGTTATTTGTATCCTGGCTTATGTTATGGAGGTTTGTAAAAACTCTTCCCTTTTTCCCATAAAAAAAGCATTTGGTTGTGTGATTTACATAAACCAAGAATACAGAATGCTTGCTTTTATAAGCTAAACCAAAATTACAATAAAAAGATTGTGATGTAAGTGACCATTTTTCTTTCTGGATTAAATGCAATTCACCTTTTGCAGATGTTTTCGGGATGAAGATCTAAGAGCTGATAGACAACCTGAGTTCACACAACTAGATATGGAGATGGCTTTTACTCCTTTAGAGGATATGTTGTCTCTTAATGAAGAGTTGATCAGAAAGGTTAGTTTATGCCATCTATAATCATATTCATTTTATCCACAATTTTGAAGTAATGGAAACATATATTAAATAAAAATTTAGAATGGAGGAACAAGGTATCAACAGATGATAACTTCTTTTGGTGATTTGAAATGTCAAATGATACTATTAAAGATTTAGAAGCAGGTATTGATATTTGCAGTCTCACTTATTTCAAGAAAAGATATATGTTGAAATGGGAAGGTGTTAATGTTTGTAGATTTTGTTTGATATAGATCTTTTGTGGACGTGGTTTTACATAAAGAAAACCATAAAAATTGAATCATGTATATTATGGCTAATTTTGAAGTTGGTTTTTATTGCAGGTTTTTCTTGAAATTAAGGGCGTGGAATTACCAAACCCTTTCCCCAGGCTTACATATGCTGAAGCAATGAATAGATATGGTTCGGACCGTCCAGATACCAGATTTGATCTAGAATTAAAAGATGTAATGATCTTTATTTCACCTCCTCCATAATACTTTTGTGGTTTGTAGCATATGGTAGTTTCTATGATATAGCTTGCTGTAATCCTGTGTTGAATCACTGCTTGTGTTTTAGTTTGTATTGCCATAACTTACCTAGATTTGCTTCATCTTGCTAAGATATAACTTTTCATTGGCTGGCAGGTATCTGACATTTTCTCAGGGTCTTCCTTCAAGGTTTTCTCTGATTCCTTGGAGTGTGGTGGTGTTATTAAAGTAATTTGTGTACCTTCTGGTGCAAAAAAGTACTCAAATTCAGTTCTTAAGAAACCTGGTGCACAGGGTGGTATTTACAACGAAGCACACAAATCTGGTGCAAAGGGTTTACCTTTTCTCAAGATCACGGAGAATGGTAAATTAGCAATTCCCTATCAAAACTCAATTTTATGATATTTTGAGAGATGTTTGTTATATTCCTGTGTTTATTGTGTAATCCTTTGATTTTAGGGGATATTGAGGGAATTTCTGCTTTAGTATCAAGTATGGATTCTGCAACTAGAGAGGATTTATTAAGGCGATGCTCTGCAGGACCAAGTGATCTGATTTTATTTGCAGTTGGTCATCATGCATCTGTAAATAAAACTCTAGATCGTCTTAGAGTTTATGTGGCTCATGAATTAGGTTTGATCGACCATGTAAGTTGGTATCTGCTTTTTAAATGAATTTTTTTCTCTATCTTTCTCCATCAATCATTTCACTTATGTTATCTAGTTATTTTTGTTTGAATTTTAGGCCAGACATTCAATTTTGTGGATTACCGACTTTCCAATGTTTGAGTGGAATGATTCGGAGCAGAGGCTTGAGGTCAGTTTTGCTTTTAATAACATCCAGCAATGCATTTCTTAATAAATAGGATATCTGGTTATGTTTTCTATTATTCTTTTCATTATTCTTAATTATGGGTTTGTGCAGGCTCTTCATCATCCTTTCACTGCACCAAATCCTGAAGACATGAACAACCTTGCATCGGCTCGTGCATTGGCTTATGACATGGTTTACAATGGGGTGGAGGTGATCGAGATTTATTTCTATTTTCTTTCCTCTCCCTTTAACTTGTGAGCCTTACAATTTTGCGACTGATACTCACTCAATATATTATACTTTGTCAGATTGGCGGGGGGAGTTTGAGAATTTATAAACGCGACATACAACAAAAGGTTTTGGAGACTGTAGGCATCTCAATGGAGCAGGCTAGTACATGCGACTCCATTCCTAGTCTTATTTATGTTTTTCATTTAGTTTCTATCTTTTCATATTTATTAAGTGAGTTGATGTTGGCTGGAAAAATTTAGACTAGAATTATGTAACATTGGTTTCTTGTGCTCTATTTGTTTTTCTGGCTACACTTTCCACTGTGTTATTATTATAATAAAAAGTTTTAGTACCTTCCACTGAAGTATCTTGCTATCTTGGTGTAATATTGCAATTCAACCAAATTTTGGGAGAACAGGAAGTACCATTTTATTAAAAACAAGAAAATCAACACCAAATAGTTTTCTTGAAAGAGTTGCAGAAAGATTTAGAAAGCAGAAAAATGTTAGAGCAGGAAGGTCGATACAAGAGGGAATCATAAGAATAGATATGATTTCACAAATTGCCTAACTTCCCCACTCACCCCACTCTAACACATATGCCCTCACATGTATCCGGGAGGGTATACAACTTAGATTTGGTTACTTTGGGTGATTGGGTCTACAACTTTTCCTTGGGCTCCCAATGGTATGAAAAATACAAGCCTATGACAATTTTACTTTAGGCTTTCCCGAAAAGTAGAGAGGAGATTGTGCAAAAAAAATAAAAATAGTAAGTGGAGTTACTATACGAATGTGTTTGGATTACATCACACGGGACGGGACAATTGATTCATTCAAGGTAGTCAAAATCTTGATTTTACGCATGATCGGTAAGGTGAAGTAAAACCGTAAATTGTATAATCGTAACATTAATCGTAAGATTATACAAAACTCATAAATATCAAATATATGCACATAAATCAAAATGTATGCATGTAAATTAGCATAAGTAAGACAAAACCTTTACATCACACTTGAAAAGTTAAGTAAATTTTAATTCATACGCATAGCTCACATTGCAACATAGTTGCATAACACTTACATAATTTAAACTTGAAACACTTACGTAATTATAACAATAACACACACATAACAACAACATAACACTTGAAATACTTATGTAATTCAAACGTTAAATCAAACTCATAAGTCTCAAACGTTAATATCTATGGGAAATGCTAACAAGTGCCCTAAGGGCACATATTAAAGAATAAAAAATAGAAATATTGTCTTGGAAGTGGTGTATTCAATTCATTGAAAGTTAAAAAATTGTTCTTTCCTAGACAATACTTCTATATTTGGTTCCTTAACGTGTGCCCTTTTCAATTTTCTGACATGTTAATGCGAACTGCAGTTTTGACTTTTTTTTCTGATGTGATCTGTGCCACAGTCAATCTTACCGGTCCTTATATTTTGGAAATAGGGTAGAATGCTTATATTTATAATGCCTTCAAGGCATGCCTGGCTTGGACTGATCTGAATTATGCATTATAATTTCTTTTTCAGGCTGAAGCTAAGTTTGGATATCTTCTTGAAGCTCTTGACATGGGGGCTCCGCCACATGGTAAGTCTTCTAAAATGATTTATAGCCCCATTCCTCCCTTGTCGATAAACTGGATTATCTTATTAGAGTAGCATTTGTCTGTGCACAACCATATCGAGGAAAGGGAAAAAGGCCAGTTTTCTTTATTTATTGAAGTAGCATTTATCACTAACTGCAAGGTAGTGGCAGTTTAGACAAGGGTATTTCTTTTGCACTGCTTTCATCGCTCTTTTTGAGAATTGAAATGATCACAACACAATCAATGGCATTTGCTATTATCACTAATGCGGGAACCACGTATTAACGCTGATCCTGAAAACATGTATATGGCAATAGATATATGATAAGACAGTCATCTAACGTTTATTATAAGCCAAACTTATGTTAAAGCTACAGCTGCAGAGACAGGAAATAGTTCAAGCAATTTTATTGAAGGTGAAAGAACTTAGTGAATAGAATGATGTGGCACTAACTCTTCTAATGTTGTCTCATTTCACAAATCAGTTATAAGTATATAAGTAATATAATATTACTTTCCATTCCCACTAAACTGAAAACATTTCAATAAAAACATCTAATATTTATCAAGTTGAAATTTAATTGGCATATATTTATTTTAGCACTACTCTAAAAACATGAGGCGCACAAATTGTATCTCAATATGTTTAACAGCAGTTGATTTTATCGATGATTATTATTTATATATCAAATGCAGGAGGCATAGCTTTTGGTCTGGACAGATTGGTTATGTTGCTAGCTGGGGCTAATTCAATCAGGGATGTCATTGCTTTCCCAAAAACAACAACTGCACAGTGTGCCCTCACGAGATCACCTTCCGAGGTGGATCCCCAACAGCTGAAAGATCTTTCAATCACTACATAG
Protein sequence

>MS.gene015696.t1

MSSLFLKALPLTTLRRTPSIFFLSRLSKTIPTLISTTRTLSSVSASIQQQQPPLPSETETLISTAKPLNESLQWVSRTHHCGQLTSNDVGKTVRLCGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEFPVAHSAINNLRLEYVVAIQGVVRPRPNQSINKKMKTGFIEIAANEVQLLNSVNAKLPFLVTTTDDAKDSLKEEVRLRYRYLDLRRQQMNSNMLLRHNVVKLMRRYLEDIHGFVEIETPILSRSTPEGARDYLVPSRIQRGTFYALPQSPQLFKQMLMVAGFDKYYQVARCFRDEDLRADRQPEFTQLDMEMAFTPLEDMLSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDRPDTRFDLELKDVSDIFSGSSFKVFSDSLECGGVIKVICVPSGAKKYSNSVLKKPGAQGGIYNEAHKSGAKGLPFLKITENGDIEGISALVSSMDSATREDLLRRCSAGPSDLILFAVGHHASVNKTLDRLRVYVAHELGLIDHARHSILWITDFPMFEWNDSEQRLEALHHPFTAPNPEDMNNLASARALAYDMVYNGVEIGGGSLRIYKRDIQQKVLETVGISMEQAEAKFGYLLEALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRSPSEVDPQQLKDLSITT