Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62901.t1 | XP_003608710.2 | 98.2 | 546 | 9 | 1 | 1 | 545 | 1 | 546 | 0.00E+00 | 1085.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62901.t1 | O48593 | 77.2 | 523 | 101 | 3 | 41 | 545 | 45 | 567 | 3.5e-238 | 825.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62901.t1 | G7JIW4 | 98.2 | 546 | 9 | 1 | 1 | 545 | 1 | 546 | 0.0e+00 | 1085.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene62901 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene62901 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene62901 | 0.869946 | 2.11E-66 | -1.69E-46 |
| MS.gene049389 | MS.gene62901 | 0.820591 | 6.33E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene62901 | 0.865822 | 4.47E-65 | -1.69E-46 |
| MS.gene049491 | MS.gene62901 | 0.858382 | 8.56E-63 | -1.69E-46 |
| MS.gene049614 | MS.gene62901 | 0.863932 | 1.75E-64 | -1.69E-46 |
| MS.gene049661 | MS.gene62901 | 0.844426 | 7.62E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene62901 | 0.837273 | 5.73E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene62901 | 0.831438 | 1.67E-55 | -1.69E-46 |
| MS.gene049760 | MS.gene62901 | 0.846311 | 2.35E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene62901 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene049907 | MS.gene62901 | 0.801821 | 7.52E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene62901 | 0.856442 | 3.21E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene62901 | 0.895946 | 5.91E-76 | -1.69E-46 |
| MS.gene050397 | MS.gene62901 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene62901 | 0.853702 | 2.01E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene62901 | 0.801793 | 7.62E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene62901 | 0.82279 | 1.96E-53 | -1.69E-46 |
| MS.gene05053 | MS.gene62901 | 0.802126 | 6.51E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene62901 | 0.825348 | 4.92E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene62901 | 0.836711 | 7.97E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene62901 | 0.802543 | 5.34E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene62901 | 0.866636 | 2.47E-65 | -1.69E-46 |
| MS.gene050770 | MS.gene62901 | 0.870784 | 1.12E-66 | -1.69E-46 |
| MS.gene050783 | MS.gene62901 | 0.811317 | 7.44E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene62901 | 0.807206 | 5.66E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene62901 | 0.801461 | 8.91E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene62901 | 0.892764 | 1.17E-74 | -1.69E-46 |
| MS.gene05105 | MS.gene62901 | 0.830502 | 2.83E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene62901 | 0.867178 | 1.66E-65 | -1.69E-46 |
| MS.gene051471 | MS.gene62901 | 0.845691 | 3.47E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene62901 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene62901 | 0.81662 | 5.04E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene62901 | 0.809709 | 1.65E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene62901 | 0.814999 | 1.16E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene62901 | 0.81099 | 8.76E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene62901 | 0.80419 | 2.43E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene62901 | 0.848661 | 5.32E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene62901 | 0.846372 | 2.26E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene62901 | 0.84359 | 1.28E-58 | -1.69E-46 |
| MS.gene052207 | MS.gene62901 | 0.831642 | 1.49E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene62901 | 0.822125 | 2.80E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene62901 | 0.822981 | 1.77E-53 | -1.69E-46 |
| MS.gene052287 | MS.gene62901 | 0.824437 | 8.08E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene62901 | 0.832988 | 6.90E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene62901 | 0.863965 | 1.71E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene62901 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene62901 | 0.876852 | 1.00E-68 | -1.69E-46 |
| MS.gene052340 | MS.gene62901 | 0.81614 | 6.45E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene62901 | 0.840069 | 1.09E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene62901 | 0.848082 | 7.69E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene62901 | 0.818157 | 2.27E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene62901 | 0.833001 | 6.85E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene62901 | 0.857366 | 1.71E-62 | -1.69E-46 |
| MS.gene053009 | MS.gene62901 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene62901 | 0.8478 | 9.19E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene62901 | 0.817997 | 2.47E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene62901 | 0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene62901 | 0.833646 | 4.73E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene62901 | 0.800423 | 1.45E-48 | -1.69E-46 |
| MS.gene053322 | MS.gene62901 | 0.907559 | 4.45E-81 | -1.69E-46 |
| MS.gene053557 | MS.gene62901 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene62901 | 0.824096 | 9.71E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene62901 | 0.840767 | 7.13E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene62901 | 0.84968 | 2.77E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene62901 | 0.862076 | 6.55E-64 | -1.69E-46 |
| MS.gene054473 | MS.gene62901 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene05455 | MS.gene62901 | 0.858401 | 8.45E-63 | -1.69E-46 |
| MS.gene054802 | MS.gene62901 | 0.85703 | 2.15E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene62901 | 0.855893 | 4.65E-62 | -1.69E-46 |
| MS.gene054804 | MS.gene62901 | 0.855775 | 5.03E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene62901 | 0.808264 | 3.37E-50 | -1.69E-46 |
| MS.gene05504 | MS.gene62901 | 0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene62901 | 0.837478 | 5.08E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene62901 | 0.819876 | 9.23E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene62901 | 0.803901 | 2.79E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene62901 | 0.875476 | 2.99E-68 | -1.69E-46 |
| MS.gene055390 | MS.gene62901 | 0.879262 | 1.44E-69 | -1.69E-46 |
| MS.gene055397 | MS.gene62901 | 0.832001 | 1.21E-55 | -1.69E-46 |
| MS.gene055412 | MS.gene62901 | 0.870111 | 1.87E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene62901 | 0.87717 | 7.79E-69 | -1.69E-46 |
| MS.gene055428 | MS.gene62901 | 0.847821 | 9.08E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene62901 | 0.865417 | 5.99E-65 | -1.69E-46 |
| MS.gene055633 | MS.gene62901 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene62901 | 0.85783 | 1.25E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene62901 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene62901 | 0.804568 | 2.03E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene62901 | 0.833569 | 4.95E-56 | -1.69E-46 |
| MS.gene055930 | MS.gene62901 | 0.804258 | 2.36E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene62901 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene62901 | 0.837724 | 4.39E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene62901 | 0.840328 | 9.29E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene62901 | 0.865807 | 4.52E-65 | -1.69E-46 |
| MS.gene056452 | MS.gene62901 | 0.841076 | 5.92E-58 | -1.69E-46 |
| MS.gene056511 | MS.gene62901 | 0.814374 | 1.59E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene62901 | 0.835167 | 1.96E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene62901 | 0.828271 | 9.87E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene62901 | 0.805373 | 1.38E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene62901 | 0.823477 | 1.36E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene62901 | 0.852848 | 3.53E-61 | -1.69E-46 |
| MS.gene056933 | MS.gene62901 | 0.84586 | 3.12E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene62901 | 0.844442 | 7.54E-59 | -1.69E-46 |
| MS.gene056942 | MS.gene62901 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene62901 | 0.894668 | 1.99E-75 | -1.69E-46 |
| MS.gene057121 | MS.gene62901 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene62901 | 0.863804 | 1.92E-64 | -1.69E-46 |
| MS.gene057129 | MS.gene62901 | 0.848664 | 5.30E-60 | -1.69E-46 |
| MS.gene057146 | MS.gene62901 | 0.900135 | 9.92E-78 | -1.69E-46 |
| MS.gene057245 | MS.gene62901 | 0.816272 | 6.02E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene62901 | 0.832177 | 1.10E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene62901 | 0.805483 | 1.31E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene62901 | 0.82209 | 2.85E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene62901 | 0.840517 | 8.29E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene62901 | 0.804562 | 2.04E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene62901 | 0.805791 | 1.13E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene62901 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene62901 | 0.839185 | 1.84E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene62901 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene62901 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene62901 | 0.809892 | 1.51E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene62901 | 0.865893 | 4.24E-65 | -1.69E-46 |
| MS.gene058233 | MS.gene62901 | 0.824039 | 1.00E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene62901 | 0.884846 | 1.35E-71 | -1.69E-46 |
| MS.gene058323 | MS.gene62901 | 0.833828 | 4.26E-56 | -1.69E-46 |
| MS.gene05842 | MS.gene62901 | 0.814206 | 1.73E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene62901 | 0.926437 | 4.70E-91 | -1.69E-46 |
| MS.gene058700 | MS.gene62901 | 0.804966 | 1.68E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene62901 | 0.827577 | 1.45E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene62901 | 0.806131 | 9.54E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene62901 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene62901 | 0.866074 | 3.72E-65 | -1.69E-46 |
| MS.gene059326 | MS.gene62901 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene059342 | MS.gene62901 | 0.818081 | 2.36E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene62901 | 0.821687 | 3.54E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene62901 | 0.901803 | 1.85E-78 | -1.69E-46 |
| MS.gene059597 | MS.gene62901 | 0.886815 | 2.46E-72 | -1.69E-46 |
| MS.gene05959 | MS.gene62901 | 0.831693 | 1.44E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene62901 | 0.876145 | 1.76E-68 | -1.69E-46 |
| MS.gene059688 | MS.gene62901 | 0.89225 | 1.89E-74 | -1.69E-46 |
| MS.gene059692 | MS.gene62901 | 0.88136 | 2.56E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene62901 | 0.88209 | 1.39E-70 | -1.69E-46 |
| MS.gene059708 | MS.gene62901 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene62901 | 0.853503 | 2.29E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene62901 | 0.835128 | 2.01E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene62901 | 0.820074 | 8.31E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene62901 | 0.816932 | 4.29E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene62901 | 0.886142 | 4.42E-72 | -1.69E-46 |
| MS.gene059974 | MS.gene62901 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene060005 | MS.gene62901 | 0.803758 | 2.99E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene62901 | 0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene62901 | 0.806001 | 1.02E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene62901 | 0.810843 | 9.42E-51 | -1.69E-46 |
| MS.gene060559 | MS.gene62901 | 0.860316 | 2.25E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene62901 | 0.857481 | 1.58E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene62901 | 0.851414 | 9.01E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene62901 | 0.847029 | 1.50E-59 | -1.69E-46 |
| MS.gene06090 | MS.gene62901 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene62901 | 0.813225 | 2.85E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene62901 | 0.834821 | 2.40E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene62901 | -0.833999 | 3.86E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene62901 | 0.897074 | 2.00E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020478 | MS.gene62901 | PPI |
| MS.gene62901 | MS.gene044767 | PPI |
| MS.gene62901 | MS.gene98602 | PPI |
| MS.gene62901 | MS.gene88178 | PPI |
| MS.gene056264 | MS.gene62901 | PPI |
| MS.gene88176 | MS.gene62901 | PPI |
| MS.gene015696 | MS.gene62901 | PPI |
| MS.gene62901 | MS.gene98667 | PPI |
| MS.gene62901 | MS.gene063697 | PPI |
| MS.gene044769 | MS.gene62901 | PPI |
| MS.gene62901 | MS.gene91166 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62901.t1 | MTR_4g100920 | 98.168 | 546 | 9 | 1 | 1 | 545 | 1 | 546 | 0.0 | 1114 |
| MS.gene62901.t1 | MTR_4g100920 | 97.959 | 441 | 8 | 1 | 1 | 440 | 1 | 441 | 0.0 | 895 |
| MS.gene62901.t1 | MTR_7g101050 | 48.023 | 531 | 191 | 13 | 93 | 545 | 53 | 576 | 1.02e-157 | 462 |
| MS.gene62901.t1 | MTR_8g102050 | 64.437 | 284 | 97 | 2 | 265 | 545 | 269 | 551 | 1.41e-129 | 389 |
| MS.gene62901.t1 | MTR_8g102050 | 47.619 | 168 | 80 | 4 | 93 | 256 | 36 | 199 | 4.51e-42 | 159 |
| MS.gene62901.t1 | MTR_8g011530 | 45.588 | 272 | 145 | 3 | 269 | 539 | 358 | 627 | 3.08e-78 | 258 |
| MS.gene62901.t1 | MTR_8g011530 | 39.873 | 158 | 87 | 4 | 98 | 252 | 129 | 281 | 4.70e-27 | 115 |
| MS.gene62901.t1 | MTR_1g014140 | 25.304 | 494 | 287 | 16 | 85 | 540 | 87 | 536 | 1.18e-30 | 125 |
| MS.gene62901.t1 | MTR_5g028360 | 25.243 | 515 | 286 | 19 | 69 | 540 | 126 | 584 | 8.05e-29 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62901.t1 | AT4G17300 | 77.170 | 530 | 102 | 5 | 35 | 545 | 58 | 587 | 0.0 | 846 |
| MS.gene62901.t1 | AT4G17300 | 77.170 | 530 | 102 | 5 | 35 | 545 | 38 | 567 | 0.0 | 846 |
| MS.gene62901.t1 | AT1G70980 | 46.390 | 554 | 222 | 9 | 63 | 545 | 22 | 571 | 2.62e-167 | 486 |
| MS.gene62901.t1 | AT5G56680 | 46.852 | 540 | 212 | 12 | 76 | 545 | 38 | 572 | 2.29e-153 | 451 |
| MS.gene62901.t1 | AT3G07420 | 38.171 | 503 | 241 | 9 | 106 | 543 | 139 | 636 | 2.15e-112 | 348 |
| MS.gene62901.t1 | AT3G07420 | 34.293 | 382 | 182 | 8 | 106 | 422 | 139 | 516 | 4.03e-63 | 216 |
| MS.gene62901.t1 | AT4G26870 | 23.301 | 515 | 323 | 13 | 55 | 538 | 52 | 525 | 1.58e-31 | 128 |
| MS.gene62901.t1 | AT4G31180 | 25.251 | 499 | 295 | 16 | 78 | 540 | 97 | 553 | 3.06e-27 | 116 |
| MS.gene62901.t1 | AT4G31180 | 25.251 | 499 | 295 | 16 | 78 | 540 | 97 | 553 | 3.06e-27 | 116 |
| MS.gene62901.t1 | AT1G68420 | 50.000 | 86 | 42 | 1 | 301 | 385 | 1 | 86 | 3.58e-22 | 91.3 |
Find 122 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAGTTCTTTCAAGAAAA+TGG | 0.089321 | 8.1:+22339697 | MS.gene62901:CDS |
| CAAGGCACTTGGCTGAATTT+TGG | 0.094094 | 8.1:+22340859 | MS.gene62901:CDS |
| CGGCAACATTCTCGTCCTTC+AGG | 0.233772 | 8.1:+22336917 | MS.gene62901:CDS |
| CTTGAAGATAAGACACATTC+TGG | 0.234015 | 8.1:+22341169 | MS.gene62901:intron |
| CCTCATGCAGGCTTTGGTTT+GGG | 0.253456 | 8.1:+22343737 | MS.gene62901:CDS |
| GCTCAAGTCGTTCTTCTCTT+TGG | 0.297940 | 8.1:-22342816 | None:intergenic |
| GGATAGTCTCTGATTATAAC+AGG | 0.301301 | 8.1:-22342138 | None:intergenic |
| TTTAATACATGGATTGATAA+AGG | 0.305854 | 8.1:+22341218 | MS.gene62901:CDS |
| TGTTAGATTGGTGAACTTAT+TGG | 0.307426 | 8.1:+22342787 | MS.gene62901:intron |
| TCCTCATGCAGGCTTTGGTT+TGG | 0.310446 | 8.1:+22343736 | MS.gene62901:CDS |
| AGATGATTTAAAGCTGAATA+AGG | 0.314569 | 8.1:+22342855 | MS.gene62901:CDS |
| CTTGGCTTCGTAGGTGAAAT+GGG | 0.315291 | 8.1:+22342056 | MS.gene62901:intron |
| CAATCTGAAGCTGTGATAAT+AGG | 0.344480 | 8.1:-22339739 | None:intergenic |
| TTCTAATATGCAATGTGTAT+TGG | 0.346387 | 8.1:+22337157 | MS.gene62901:CDS |
| ACTTGGCTTCGTAGGTGAAA+TGG | 0.348613 | 8.1:+22342055 | MS.gene62901:intron |
| GATTTGCGTCGTTATGGTTC+AGG | 0.349152 | 8.1:+22342898 | MS.gene62901:CDS |
| GCAGTTCCTCATGCAGGCTT+TGG | 0.349864 | 8.1:+22343731 | MS.gene62901:intron |
| TATCTTGATTTGCGTCGTTA+TGG | 0.358263 | 8.1:+22342892 | MS.gene62901:CDS |
| CGTGCAAGGACAAATACTTT+TGG | 0.359093 | 8.1:+22338475 | MS.gene62901:CDS |
| AAATAAGAAATTTGAATTCC+CGG | 0.371942 | 8.1:+22341441 | MS.gene62901:CDS |
| CCCATGCAGGTGTATACATT+TGG | 0.373997 | 8.1:+22340804 | MS.gene62901:intron |
| GAGGAGGAGAAGGGAGAAGA+AGG | 0.380253 | 8.1:-22336777 | None:intergenic |
| TCAGTTGTTTCATGAGAATT+CGG | 0.383059 | 8.1:-22340406 | None:intergenic |
| TATCCATTCCTGTTGCAAAC+TGG | 0.384553 | 8.1:-22343775 | None:intergenic |
| ACAAGTTCTTTCAAGAAAAT+GGG | 0.396971 | 8.1:+22339698 | MS.gene62901:CDS |
| TATATAACTGAAGAGGCATT+TGG | 0.407178 | 8.1:+22342108 | MS.gene62901:CDS |
| TTCAAGAAAATGGGTTCGTA+TGG | 0.411619 | 8.1:+22339707 | MS.gene62901:CDS |
| AGACTTGTCCAGTTTGCAAC+AGG | 0.411746 | 8.1:+22343767 | MS.gene62901:CDS |
| ATATTATTATTAGGTAGAAT+CGG | 0.414667 | 8.1:+22338075 | MS.gene62901:intron |
| TGCAGAAGATACGGCGGCGG+TGG | 0.427232 | 8.1:-22336800 | None:intergenic |
| ACCTTGTTGGTGGCGTCGGA+AGG | 0.431057 | 8.1:-22336834 | None:intergenic |
| GATACGGCGGCGGTGGGAGG+AGG | 0.431590 | 8.1:-22336793 | None:intergenic |
| CAGAGAATTCTAACACTTCA+AGG | 0.439982 | 8.1:+22340841 | MS.gene62901:CDS |
| AATTTCAGGTTGCAAGGGTT+AGG | 0.447514 | 8.1:+22339653 | MS.gene62901:intron |
| TGCGTTAAGTTGGCCTGAAA+CGG | 0.453395 | 8.1:-22340645 | None:intergenic |
| TCATGAAACAACTGATTCTC+CGG | 0.458803 | 8.1:+22340414 | MS.gene62901:CDS |
| GGCAACATTCTCGTCCTTCA+GGG | 0.459083 | 8.1:+22336918 | MS.gene62901:CDS |
| CGACGACTTTGAGCTTCTTA+CGG | 0.459788 | 8.1:-22336866 | None:intergenic |
| TCAACTCTTTCAGGATATCA+AGG | 0.460987 | 8.1:+22342359 | MS.gene62901:intron |
| GCGGCGGTGGGAGGAGGAGA+AGG | 0.462357 | 8.1:-22336787 | None:intergenic |
| TGGTATGCAGTTCCTCATGC+AGG | 0.462748 | 8.1:+22343725 | MS.gene62901:intron |
| TGAGAACGGAGGAGAAAAGA+AGG | 0.463565 | 8.1:-22336747 | None:intergenic |
| ACATTCTCGTCCTTCAGGGA+TGG | 0.465571 | 8.1:+22336922 | MS.gene62901:CDS |
| TATTATTATTAGGTAGAATC+GGG | 0.472422 | 8.1:+22338076 | MS.gene62901:intron |
| TACTAGAACTCAGCCGAGCC+AGG | 0.474870 | 8.1:-22343830 | None:intergenic |
| TAAAACAATTTCAGGTTGCA+AGG | 0.475131 | 8.1:+22339647 | MS.gene62901:intron |
| GAGCCAGGTGTTCGAGGAAA+AGG | 0.478464 | 8.1:-22343815 | None:intergenic |
| CATAAGTTTCTGCGTTAAGT+TGG | 0.481268 | 8.1:-22340655 | None:intergenic |
| ACGGAATTGTGGAACCTTGT+TGG | 0.481783 | 8.1:-22336847 | None:intergenic |
| AGCTGAATAAGGATGCATAT+TGG | 0.483741 | 8.1:+22342866 | MS.gene62901:CDS |
| GAGAAGGGAGAAGAAGGAAG+AGG | 0.484917 | 8.1:-22336771 | None:intergenic |
| CATTCTCGTCCTTCAGGGAT+GGG | 0.486762 | 8.1:+22336923 | MS.gene62901:CDS |
| TGAGGTTGAAGGTTATGATC+AGG | 0.492658 | 8.1:+22337184 | MS.gene62901:CDS |
| TTCTAACACTTCAAGGCACT+TGG | 0.499429 | 8.1:+22340848 | MS.gene62901:CDS |
| GCAAAAGCTGCGTAACTGAA+TGG | 0.499500 | 8.1:-22336699 | None:intergenic |
| TGTTGCGTTTAGATTAATGA+TGG | 0.500436 | 8.1:+22337125 | MS.gene62901:intron |
| TCAGCCGAGCCAGGTGTTCG+AGG | 0.505554 | 8.1:-22343821 | None:intergenic |
| AAGAAGGAAGAGGATGAGAA+CGG | 0.507936 | 8.1:-22336761 | None:intergenic |
| TTGAGCTTCTTACGGAATTG+TGG | 0.508941 | 8.1:-22336858 | None:intergenic |
| AGCTTCAGATTGTGAGGGAG+CGG | 0.510026 | 8.1:+22339750 | MS.gene62901:CDS |
| AAAATGATAAATTAATTGAC+TGG | 0.517612 | 8.1:+22340452 | MS.gene62901:CDS |
| GCAGAAGATACGGCGGCGGT+GGG | 0.519517 | 8.1:-22336799 | None:intergenic |
| TGTCCAGTTTGCAACAGGAA+TGG | 0.522041 | 8.1:+22343772 | MS.gene62901:CDS |
| GAGTAGCGGTGCAGAAGATA+CGG | 0.525095 | 8.1:-22336809 | None:intergenic |
| AAAGGTTACATACTACAAAC+CGG | 0.532543 | 8.1:-22341047 | None:intergenic |
| GGTGCATCTGTGTGGGTGCA+AGG | 0.532793 | 8.1:+22338112 | MS.gene62901:CDS |
| TACATGCGACAGAATGATGA+TGG | 0.534164 | 8.1:+22342387 | MS.gene62901:CDS |
| GAAGATACGGCGGCGGTGGG+AGG | 0.535209 | 8.1:-22336796 | None:intergenic |
| TGGAACCTTGTTGGTGGCGT+CGG | 0.536323 | 8.1:-22336838 | None:intergenic |
| AGATCAGCAAATGCAAGCTC+CGG | 0.539627 | 8.1:-22340991 | None:intergenic |
| CTTGTGCAACTGCATATCTC+CGG | 0.540089 | 8.1:+22341028 | MS.gene62901:CDS |
| GCTTCAGATTGTGAGGGAGC+GGG | 0.540381 | 8.1:+22339751 | MS.gene62901:CDS |
| ATAACTGAAGAGGCATTTGG+TGG | 0.544359 | 8.1:+22342111 | MS.gene62901:CDS |
| CGGCGGTGGGAGGAGGAGAA+GGG | 0.545990 | 8.1:-22336786 | None:intergenic |
| TATCACAGCTTCAGATTGTG+AGG | 0.549441 | 8.1:+22339744 | MS.gene62901:CDS |
| GCTTCTTCAGATGATTGAGC+CGG | 0.549993 | 8.1:+22340972 | MS.gene62901:intron |
| GAAGCTCAACAAAATAGTAC+AGG | 0.550415 | 8.1:+22338177 | MS.gene62901:CDS |
| AGAATTCTCTGCTCGAAATG+TGG | 0.561347 | 8.1:-22340829 | None:intergenic |
| TGCAAGGGTTAGGAATGCAT+TGG | 0.564334 | 8.1:+22339663 | MS.gene62901:CDS |
| GAATCGGGCTTGATTACCAC+TGG | 0.564483 | 8.1:+22338091 | MS.gene62901:CDS |
| TGGAAGAACAGTTGCTGCGA+TGG | 0.566617 | 8.1:+22342407 | MS.gene62901:CDS |
| GAATTCTCTGCTCGAAATGT+GGG | 0.568963 | 8.1:-22340828 | None:intergenic |
| TCAAGAAAATGGGTTCGTAT+GGG | 0.569289 | 8.1:+22339708 | MS.gene62901:CDS |
| AAAACAATTTCAGGTTGCAA+GGG | 0.570336 | 8.1:+22339648 | MS.gene62901:intron |
| GGATAACTGCAAGGAAGACA+TGG | 0.572443 | 8.1:+22341190 | MS.gene62901:CDS |
| GACGATCAATTCGATTCCCT+CGG | 0.572461 | 8.1:+22336897 | MS.gene62901:CDS |
| GAGTACGAACCCATCCCTGA+AGG | 0.578582 | 8.1:-22336932 | None:intergenic |
| GCAGATAACTTACACTGAAG+CGG | 0.580645 | 8.1:+22341399 | MS.gene62901:CDS |
| AAGGAAGAGGATGAGAACGG+AGG | 0.581539 | 8.1:-22336758 | None:intergenic |
| TAGATTGGTGAACTTATTGG+TGG | 0.582509 | 8.1:+22342790 | MS.gene62901:intron |
| CCTTGTTGGTGGCGTCGGAA+GGG | 0.582841 | 8.1:-22336833 | None:intergenic |
| CAAAAGCACATCTTCGTGCA+AGG | 0.585364 | 8.1:+22338461 | MS.gene62901:CDS |
| TGCTGATCTAAACGATGACA+TGG | 0.585724 | 8.1:+22341005 | MS.gene62901:CDS |
| GAAGCAAATGAGTGTTGCAA+TGG | 0.585908 | 8.1:+22336650 | None:intergenic |
| CCCTTCCGACGCCACCAACA+AGG | 0.590417 | 8.1:+22336833 | MS.gene62901:CDS |
| TACCACTGGTGCATCTGTGT+GGG | 0.602852 | 8.1:+22338105 | MS.gene62901:CDS |
| GGAGTTGTGGTTAAGAGCCA+AGG | 0.604507 | 8.1:+22338133 | MS.gene62901:CDS |
| TGAATAAGGATGCATATTGG+TGG | 0.609159 | 8.1:+22342869 | MS.gene62901:CDS |
| TTGGCTTCGTAGGTGAAATG+GGG | 0.609417 | 8.1:+22342057 | MS.gene62901:intron |
| TGAGCGTTATATAACTGAAG+AGG | 0.609986 | 8.1:+22342101 | MS.gene62901:CDS |
| GAATTGTGGAACCTTGTTGG+TGG | 0.615591 | 8.1:-22336844 | None:intergenic |
| CCCAAACCAAAGCCTGCATG+AGG | 0.617498 | 8.1:-22343737 | None:intergenic |
| ATCACAGCTTCAGATTGTGA+GGG | 0.619918 | 8.1:+22339745 | MS.gene62901:CDS |
| TGTGTGGGTGCAAGGAGTTG+TGG | 0.625198 | 8.1:+22338120 | MS.gene62901:CDS |
| TTACCACTGGTGCATCTGTG+TGG | 0.625856 | 8.1:+22338104 | MS.gene62901:CDS |
| GATGGACATGTTGGTTCCGA+AGG | 0.626645 | 8.1:+22342425 | MS.gene62901:CDS |
| GAAGGACGAGAATGTTGCCG+AGG | 0.627238 | 8.1:-22336914 | None:intergenic |
| CACCCACACAGATGCACCAG+TGG | 0.627639 | 8.1:-22338107 | None:intergenic |
| AGTTGCTGCGATGGACATGT+TGG | 0.630358 | 8.1:+22342416 | MS.gene62901:CDS |
| GTATTGGACACTGAGGTTGA+AGG | 0.631094 | 8.1:+22337173 | MS.gene62901:CDS |
| CGGTGCAGAAGATACGGCGG+CGG | 0.637252 | 8.1:-22336803 | None:intergenic |
| GAGTAGCGTCACTTTCCTCG+AGG | 0.642569 | 8.1:+22336965 | MS.gene62901:CDS |
| TGAGTGTTGCAATGGCAACA+AGG | 0.644645 | 8.1:+22336658 | MS.gene62901:CDS |
| AAGGACGAGAATGTTGCCGA+GGG | 0.645469 | 8.1:-22336913 | None:intergenic |
| ACACATTCTGGATAACTGCA+AGG | 0.650791 | 8.1:+22341181 | MS.gene62901:CDS |
| AATGGTTTAACTATGCGTAA+CGG | 0.658463 | 8.1:-22336681 | None:intergenic |
| GATAGTCTCTGATTATAACA+GGG | 0.688186 | 8.1:-22342137 | None:intergenic |
| GGCGTCGGAAGGGAGAGTAG+CGG | 0.696542 | 8.1:-22336823 | None:intergenic |
| TATAATCAGAGACTATCCAA+AGG | 0.701270 | 8.1:+22342143 | MS.gene62901:CDS |
| TGTGTGTACATCAGAAAGAG+CGG | 0.715375 | 8.1:-22340681 | None:intergenic |
| TAGCGGTGCAGAAGATACGG+CGG | 0.728344 | 8.1:-22336806 | None:intergenic |
| GCAATGTGTATTGGACACTG+AGG | 0.779503 | 8.1:+22337166 | MS.gene62901:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 22336657 | 22343850 | 22336657 | ID=MS.gene62901 |
| chr8.1 | mRNA | 22336657 | 22343850 | 22336657 | ID=MS.gene62901.t1;Parent=MS.gene62901 |
| chr8.1 | exon | 22336657 | 22336986 | 22336657 | ID=MS.gene62901.t1.exon1;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22336657 | 22336986 | 22336657 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22337137 | 22337205 | 22337137 | ID=MS.gene62901.t1.exon2;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22337137 | 22337205 | 22337137 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22338088 | 22338198 | 22338088 | ID=MS.gene62901.t1.exon3;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22338088 | 22338198 | 22338088 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22338397 | 22338501 | 22338397 | ID=MS.gene62901.t1.exon4;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22338397 | 22338501 | 22338397 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22339661 | 22339798 | 22339661 | ID=MS.gene62901.t1.exon5;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22339661 | 22339798 | 22339661 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22340403 | 22340480 | 22340403 | ID=MS.gene62901.t1.exon6;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22340403 | 22340480 | 22340403 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22340617 | 22340694 | 22340617 | ID=MS.gene62901.t1.exon7;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22340617 | 22340694 | 22340617 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22340813 | 22340881 | 22340813 | ID=MS.gene62901.t1.exon8;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22340813 | 22340881 | 22340813 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22340982 | 22341056 | 22340982 | ID=MS.gene62901.t1.exon9;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22340982 | 22341056 | 22340982 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22341176 | 22341259 | 22341176 | ID=MS.gene62901.t1.exon10;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22341176 | 22341259 | 22341176 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22341376 | 22341462 | 22341376 | ID=MS.gene62901.t1.exon11;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22341376 | 22341462 | 22341376 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22342069 | 22342164 | 22342069 | ID=MS.gene62901.t1.exon12;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22342069 | 22342164 | 22342069 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22342372 | 22342446 | 22342372 | ID=MS.gene62901.t1.exon13;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22342372 | 22342446 | 22342372 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22342793 | 22342919 | 22342793 | ID=MS.gene62901.t1.exon14;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22342793 | 22342919 | 22342793 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| chr8.1 | exon | 22343735 | 22343850 | 22343735 | ID=MS.gene62901.t1.exon15;Parent=MS.gene62901.t1 |
| chr8.1 | CDS | 22343735 | 22343850 | 22343735 | ID=cds.MS.gene62901.t1;Parent=MS.gene62901.t1 |
| Gene Sequence |
| Protein sequence |
