AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015781

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015781.t1 MTR_6g087040 84.127 504 80 0 1 504 1 504 0.0 887
MS.gene015781.t1 MTR_6g088375 84.127 504 80 0 1 504 1 504 0.0 887
MS.gene015781.t1 MTR_8g102860 76.113 494 118 0 13 506 13 506 0.0 791
MS.gene015781.t1 MTR_8g102860 75.330 454 112 0 53 506 1 454 0.0 718
MS.gene015781.t1 MTR_0204s0020 58.656 491 199 3 8 497 3 490 0.0 607
MS.gene015781.t1 MTR_0204s0020 58.248 491 198 4 8 497 3 487 0.0 597
MS.gene015781.t1 MTR_5g094760 56.805 507 214 4 1 505 1 504 0.0 597
MS.gene015781.t1 MTR_7g091690 58.032 498 204 4 1 496 1 495 0.0 593
MS.gene015781.t1 MTR_0204s0040 55.689 501 215 4 2 501 8 502 0.0 590
MS.gene015781.t1 MTR_4g116770 55.689 501 215 4 2 501 204 698 0.0 589
MS.gene015781.t1 MTR_4g116790 54.813 509 223 5 3 510 6 508 0.0 573
MS.gene015781.t1 MTR_5g006070 55.847 496 213 6 18 509 14 507 0.0 568
MS.gene015781.t1 MTR_3g008160 53.909 486 221 3 18 501 15 499 0.0 533
MS.gene015781.t1 MTR_1g038630 53.295 516 228 6 1 508 1 511 0.0 529
MS.gene015781.t1 MTR_5g006070 55.098 461 201 6 53 509 1 459 0.0 522
MS.gene015781.t1 MTR_1g104780 54.455 505 221 7 1 501 1 500 0.0 518
MS.gene015781.t1 MTR_1g104750 50.000 502 244 5 1 499 1 498 5.86e-179 512
MS.gene015781.t1 MTR_1g104770 49.901 503 244 6 1 499 1 499 2.03e-178 511
MS.gene015781.t1 MTR_5g082540 52.156 487 228 4 18 501 15 499 2.71e-178 511
MS.gene015781.t1 MTR_4g091370 54.379 491 219 3 18 504 15 504 2.08e-175 504
MS.gene015781.t1 MTR_0009s0370 49.902 509 249 4 7 510 2 509 6.53e-174 500
MS.gene015781.t1 MTR_3g008170 50.101 493 242 4 21 510 18 509 1.66e-173 499
MS.gene015781.t1 MTR_3g008160 53.437 451 207 3 53 501 1 450 2.05e-171 491
MS.gene015781.t1 MTR_3g023480 49.804 510 246 5 10 512 5 511 2.06e-170 491
MS.gene015781.t1 MTR_5g041550 51.485 505 234 6 1 499 1 500 7.30e-170 489
MS.gene015781.t1 MTR_3g093010 50.290 517 247 6 1 512 1 512 9.11e-169 487
MS.gene015781.t1 MTR_1g038600 50.680 515 225 7 1 508 1 493 1.70e-168 485
MS.gene015781.t1 MTR_3g074410 47.151 509 261 8 1 505 1 505 4.43e-161 467
MS.gene015781.t1 MTR_3g074390 48.479 493 245 8 21 509 23 510 3.28e-160 465
MS.gene015781.t1 MTR_3g074270 47.705 501 235 7 1 499 1 476 1.99e-156 454
MS.gene015781.t1 MTR_4g090600 50.996 502 236 6 9 505 10 506 2.19e-156 455
MS.gene015781.t1 MTR_3g007910 47.151 509 229 7 1 505 1 473 6.17e-155 450
MS.gene015781.t1 MTR_4g116790 54.795 365 159 4 3 366 6 365 7.68e-147 426
MS.gene015781.t1 MTR_3g093060 47.566 452 230 4 53 498 1 451 1.90e-143 420
MS.gene015781.t1 MTR_3g074380 47.967 369 187 5 1 367 1 366 7.61e-110 331
MS.gene015781.t1 MTR_3g074340 45.048 313 166 6 191 499 20 330 1.30e-91 283
MS.gene015781.t1 MTR_3g074370 45.048 313 166 6 191 499 20 330 1.69e-91 283
MS.gene015781.t1 MTR_3g074320 45.048 313 166 6 191 499 20 330 1.80e-91 283
MS.gene015781.t1 MTR_3g074400 36.703 455 223 10 53 480 1 417 1.57e-81 260
MS.gene015781.t1 MTR_6g088450 28.980 490 294 14 8 478 45 499 3.83e-58 201
MS.gene015781.t1 MTR_8g103500 27.423 485 310 10 21 489 13 471 1.09e-53 189
MS.gene015781.t1 MTR_4g072030 27.723 505 319 11 28 510 26 506 8.42e-53 187
MS.gene015781.t1 MTR_3g084110 29.102 512 328 13 10 509 7 495 3.28e-51 182
MS.gene015781.t1 MTR_4g069500 26.096 502 330 9 26 507 29 509 6.22e-51 182
MS.gene015781.t1 MTR_4g069500 27.009 448 307 6 79 507 13 459 7.02e-50 178
MS.gene015781.t1 MTR_6g018790 31.291 457 282 10 32 485 111 538 3.83e-49 177
MS.gene015781.t1 MTR_7g005910 28.340 494 321 11 25 510 32 500 1.06e-48 175
MS.gene015781.t1 MTR_1g116660 28.425 489 320 12 25 506 34 499 1.30e-48 175
MS.gene015781.t1 MTR_7g082270 29.011 455 295 8 32 485 71 498 5.65e-48 173
MS.gene015781.t1 MTR_8g077890 28.600 493 301 12 26 492 18 485 2.10e-47 172
MS.gene015781.t1 MTR_1g116650 28.889 495 307 11 25 511 77 534 6.42e-47 171
MS.gene015781.t1 MTR_5g075300 27.823 496 310 10 21 492 14 485 2.53e-46 169
MS.gene015781.t1 MTR_7g446340 27.160 486 302 13 25 492 54 505 5.05e-46 169
MS.gene015781.t1 MTR_6g007340 27.160 486 302 13 25 492 54 505 5.05e-46 169
MS.gene015781.t1 MTR_3g116240 27.066 484 306 12 26 485 27 487 6.61e-45 165
MS.gene015781.t1 MTR_7g082270 29.723 397 252 7 32 428 71 440 8.04e-44 161
MS.gene015781.t1 MTR_2g013310 26.205 477 315 12 26 491 52 502 1.01e-43 162
MS.gene015781.t1 MTR_4g077740 28.753 473 287 14 34 485 53 496 2.40e-43 160
MS.gene015781.t1 MTR_4g013205 29.188 394 262 7 96 485 88 468 8.25e-43 159
MS.gene015781.t1 MTR_2g013310 27.436 390 269 8 111 491 45 429 1.98e-42 157
MS.gene015781.t1 MTR_5g096000 44.385 187 81 2 1 187 1 164 2.18e-41 150
MS.gene015781.t1 MTR_5g096000 51.938 129 62 0 377 505 176 304 1.41e-33 129
MS.gene015781.t1 MTR_2g049020 29.942 344 215 6 35 371 35 359 1.52e-39 151
MS.gene015781.t1 MTR_2g026160 30.814 344 203 8 25 355 26 347 2.29e-39 151
MS.gene015781.t1 MTR_3g074330 51.235 162 68 3 1 155 1 158 2.87e-39 141
MS.gene015781.t1 MTR_3g074360 51.235 162 68 3 1 155 1 158 2.87e-39 141
MS.gene015781.t1 MTR_1g038620 45.912 159 68 2 206 364 50 190 7.13e-39 140
MS.gene015781.t1 MTR_6g087910 27.665 394 268 7 94 485 104 482 1.53e-38 147
MS.gene015781.t1 MTR_3g074310 50.617 162 69 3 1 155 1 158 1.54e-38 139
MS.gene015781.t1 MTR_5g077580 27.353 563 282 18 35 501 35 566 7.77e-38 146
MS.gene015781.t1 MTR_2g048720 31.288 326 199 7 35 355 35 340 1.24e-37 146
MS.gene015781.t1 MTR_8g077310 25.486 463 312 8 27 485 48 481 2.25e-36 141
MS.gene015781.t1 MTR_1g022315 27.073 410 285 7 86 490 89 489 1.29e-35 139
MS.gene015781.t1 MTR_5g019870 28.082 438 284 12 81 492 50 482 1.70e-35 139
MS.gene015781.t1 MTR_7g113970 26.570 414 280 9 86 492 102 498 2.21e-35 138
MS.gene015781.t1 MTR_8g077310 26.650 394 274 8 97 485 1 384 2.51e-35 136
MS.gene015781.t1 MTR_1g022315 27.436 390 269 7 106 490 10 390 5.18e-35 135
MS.gene015781.t1 MTR_7g113960 27.094 406 272 9 86 485 67 454 7.24e-35 137
MS.gene015781.t1 MTR_5g020270 25.845 414 284 8 86 490 90 489 1.03e-34 136
MS.gene015781.t1 MTR_5g020270 26.478 389 263 8 111 490 15 389 2.67e-34 133
MS.gene015781.t1 MTR_8g077300 27.094 406 279 7 86 485 79 473 3.97e-34 134
MS.gene015781.t1 MTR_3g080240 26.329 395 274 10 96 485 145 527 4.66e-34 135
MS.gene015781.t1 MTR_7g094450 26.366 421 288 6 67 485 69 469 5.40e-34 134
MS.gene015781.t1 MTR_4g118610 29.369 412 258 11 86 485 92 482 9.20e-33 131
MS.gene015781.t1 MTR_4g064820 29.630 351 213 8 34 366 104 438 2.39e-31 127
MS.gene015781.t1 MTR_2g020710 27.027 407 272 10 87 485 1 390 1.13e-30 123
MS.gene015781.t1 MTR_2g020710 26.961 408 273 10 86 485 89 479 1.27e-30 124
MS.gene015781.t1 MTR_0064s0040 42.029 138 68 1 18 155 16 141 2.59e-30 115
MS.gene015781.t1 MTR_5g020270 25.183 409 272 9 86 490 90 468 1.55e-29 121
MS.gene015781.t1 MTR_7g094110 26.179 424 285 8 67 485 71 471 1.82e-29 121
MS.gene015781.t1 MTR_4g069500 24.611 321 223 5 205 507 1 320 6.50e-29 117
MS.gene015781.t1 MTR_2g026140 27.221 349 207 9 36 371 34 348 6.76e-29 120
MS.gene015781.t1 MTR_8g077310 25.284 352 228 7 27 376 48 366 4.73e-25 107
MS.gene015781.t1 MTR_7g113960 28.727 275 178 6 86 355 67 328 2.16e-24 105
MS.gene015781.t1 MTR_3g116060 35.057 174 111 2 91 263 50 222 6.83e-24 106
MS.gene015781.t1 MTR_7g113970 27.586 290 189 8 86 368 102 377 6.76e-23 101
MS.gene015781.t1 MTR_7g094110 24.586 423 273 8 67 485 71 451 9.91e-23 101
MS.gene015781.t1 MTR_1g114280 36.364 154 77 3 350 501 21 155 3.50e-22 93.6
MS.gene015781.t1 MTR_5g024740 28.571 238 149 5 27 262 5 223 3.56e-22 100
MS.gene015781.t1 MTR_3g118530 34.503 171 111 1 94 263 54 224 9.82e-22 99.4
MS.gene015781.t1 MTR_3g118530 34.503 171 111 1 94 263 54 224 1.31e-21 99.0
MS.gene015781.t1 MTR_8g073100 27.572 243 160 5 79 306 39 280 8.95e-21 96.3
MS.gene015781.t1 MTR_5g044910 29.379 177 124 1 87 262 47 223 1.53e-20 95.9
MS.gene015781.t1 MTR_4g118610 28.280 343 213 11 86 416 92 413 1.92e-20 94.4
MS.gene015781.t1 MTR_2g020710 25.664 339 227 10 86 416 89 410 3.55e-20 93.2
MS.gene015781.t1 MTR_2g020710 25.740 338 226 10 86 415 89 409 3.74e-20 93.2
MS.gene015781.t1 MTR_2g020710 27.018 285 187 8 86 363 89 359 1.78e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015781.t1 AT1G77210 73.016 504 136 0 1 504 1 504 0.0 775
MS.gene015781.t1 AT1G77210 73.016 504 136 0 1 504 1 504 0.0 775
MS.gene015781.t1 AT4G02050 59.649 513 201 5 1 510 1 510 0.0 622
MS.gene015781.t1 AT4G02050 59.649 513 201 5 1 510 1 510 0.0 622
MS.gene015781.t1 AT5G26340 55.750 513 219 6 1 509 1 509 0.0 570
MS.gene015781.t1 AT3G19940 51.515 495 232 3 22 509 21 514 0.0 545
MS.gene015781.t1 AT1G11260 52.751 527 227 7 1 511 1 521 0.0 538
MS.gene015781.t1 AT1G50310 52.795 483 224 3 22 501 21 502 0.0 535
MS.gene015781.t1 AT1G77210 72.000 350 98 0 155 504 6 355 0.0 531
MS.gene015781.t1 AT3G19930 52.079 505 232 6 1 501 1 499 0.0 521
MS.gene015781.t1 AT3G19930 52.079 505 232 6 1 501 1 499 0.0 521
MS.gene015781.t1 AT5G23270 52.259 509 228 7 1 501 1 502 0.0 518
MS.gene015781.t1 AT4G21480 51.959 485 228 4 18 499 15 497 6.03e-173 497
MS.gene015781.t1 AT5G26250 49.702 503 245 5 10 510 9 505 1.10e-172 496
MS.gene015781.t1 AT3G05960 49.393 494 247 3 14 506 9 500 2.64e-170 491
MS.gene015781.t1 AT5G61520 47.791 498 251 5 21 511 19 514 1.75e-157 458
MS.gene015781.t1 AT1G34580 45.562 507 260 9 1 498 1 500 2.57e-149 437
MS.gene015781.t1 AT1G07340 46.612 487 254 6 18 501 15 498 2.02e-147 432
MS.gene015781.t1 AT5G61520 47.109 467 238 5 52 511 2 466 8.46e-143 419
MS.gene015781.t1 AT1G34580 45.275 455 235 8 53 498 1 450 5.26e-133 394
MS.gene015781.t1 AT1G50310 51.143 350 167 3 155 501 11 359 2.84e-126 373
MS.gene015781.t1 AT2G18480 30.867 473 279 11 40 489 36 483 8.90e-58 200
MS.gene015781.t1 AT4G36670 30.137 511 300 13 26 512 16 493 1.73e-57 199
MS.gene015781.t1 AT3G18830 28.429 503 317 11 26 506 35 516 1.74e-57 200
MS.gene015781.t1 AT2G16130 29.652 489 301 11 26 492 25 492 3.15e-55 193
MS.gene015781.t1 AT2G16120 28.797 507 314 12 26 510 25 506 1.59e-54 191
MS.gene015781.t1 AT5G17010 30.346 491 300 12 12 485 33 498 1.43e-46 169
MS.gene015781.t1 AT5G17010 30.346 491 300 12 12 485 33 498 1.43e-46 169
MS.gene015781.t1 AT5G17010 30.346 491 300 12 12 485 33 498 1.43e-46 169
MS.gene015781.t1 AT5G16150 30.297 472 297 9 19 487 98 540 1.61e-46 170
MS.gene015781.t1 AT5G16150 30.297 472 297 9 19 487 98 540 1.61e-46 170
MS.gene015781.t1 AT5G16150 30.297 472 297 9 19 487 98 540 1.61e-46 170
MS.gene015781.t1 AT5G59250 28.740 508 310 13 3 485 72 552 1.56e-45 168
MS.gene015781.t1 AT2G43330 28.838 482 308 11 25 498 30 484 5.83e-45 165
MS.gene015781.t1 AT2G20780 26.744 516 326 15 11 511 40 518 5.05e-43 160
MS.gene015781.t1 AT3G03090 29.274 468 291 11 34 485 55 498 2.30e-42 158
MS.gene015781.t1 AT2G20780 27.902 448 291 14 79 511 30 460 7.74e-42 156
MS.gene015781.t1 AT2G35740 26.821 563 288 16 25 490 25 560 1.58e-41 157
MS.gene015781.t1 AT4G16480 32.055 365 211 9 23 373 24 365 3.00e-41 156
MS.gene015781.t1 AT4G16480 32.055 365 211 9 23 373 24 365 3.00e-41 156
MS.gene015781.t1 AT4G16480 32.055 365 211 9 23 373 24 365 3.00e-41 156
MS.gene015781.t1 AT1G08930 28.571 427 255 11 86 492 98 494 1.11e-40 153
MS.gene015781.t1 AT1G08930 28.571 427 255 11 86 492 98 494 1.11e-40 153
MS.gene015781.t1 AT1G67300 28.852 357 236 8 96 448 103 445 9.70e-40 150
MS.gene015781.t1 AT1G67300 28.852 357 236 8 96 448 103 445 9.70e-40 150
MS.gene015781.t1 AT1G67300 28.141 398 264 8 96 485 103 486 1.63e-39 150
MS.gene015781.t1 AT3G05400 28.434 415 269 11 86 491 66 461 3.77e-39 148
MS.gene015781.t1 AT1G08900 29.064 406 266 8 86 485 23 412 7.57e-39 147
MS.gene015781.t1 AT1G08900 29.064 406 266 8 86 485 65 454 1.17e-38 147
MS.gene015781.t1 AT1G08900 29.064 406 266 8 86 485 65 454 1.17e-38 147
MS.gene015781.t1 AT1G08900 29.064 406 266 8 86 485 57 446 1.31e-38 147
MS.gene015781.t1 AT1G67300 28.392 398 262 9 96 485 103 485 2.27e-38 147
MS.gene015781.t1 AT1G67300 28.392 398 262 9 96 485 103 485 2.27e-38 147
MS.gene015781.t1 AT3G05155 27.166 427 280 10 71 485 47 454 3.58e-38 145
MS.gene015781.t1 AT1G67300 28.869 336 223 7 96 427 103 426 4.03e-38 145
MS.gene015781.t1 AT1G67300 28.869 336 223 7 96 427 103 426 4.03e-38 145
MS.gene015781.t1 AT1G79820 27.250 400 280 5 87 485 97 486 4.52e-38 146
MS.gene015781.t1 AT1G79820 27.250 400 280 5 87 485 97 486 4.52e-38 146
MS.gene015781.t1 AT1G54730 27.093 454 298 8 34 485 39 461 5.90e-38 145
MS.gene015781.t1 AT3G05400 29.847 392 237 13 119 491 69 441 8.53e-38 144
MS.gene015781.t1 AT1G08890 28.889 405 268 8 86 485 67 456 2.43e-37 143
MS.gene015781.t1 AT1G30220 28.746 327 209 7 35 355 37 345 4.83e-37 144
MS.gene015781.t1 AT5G27360 27.061 473 303 9 19 485 28 464 6.03e-37 142
MS.gene015781.t1 AT1G79820 27.507 349 243 4 87 435 97 435 1.06e-36 141
MS.gene015781.t1 AT5G27360 27.521 476 297 10 19 485 76 512 1.10e-36 142
MS.gene015781.t1 AT5G27350 27.629 485 285 11 19 485 24 460 1.82e-36 141
MS.gene015781.t1 AT2G48020 26.601 406 276 6 86 485 68 457 1.25e-35 139
MS.gene015781.t1 AT2G48020 26.601 406 276 6 86 485 68 457 1.25e-35 139
MS.gene015781.t1 AT1G05030 29.877 405 253 13 95 487 78 463 2.67e-35 138
MS.gene015781.t1 AT1G05030 28.475 446 296 12 50 487 85 515 3.19e-35 138
MS.gene015781.t1 AT1G75220 27.007 411 283 7 86 490 88 487 4.18e-35 137
MS.gene015781.t1 AT4G04760 27.966 472 303 10 26 492 31 470 6.23e-35 137
MS.gene015781.t1 AT4G04760 28.605 430 282 8 68 492 2 411 9.02e-35 135
MS.gene015781.t1 AT4G04750 28.467 411 274 8 86 492 124 518 2.72e-34 135
MS.gene015781.t1 AT4G04750 28.467 411 274 8 86 492 80 474 3.96e-34 135
MS.gene015781.t1 AT4G04750 28.467 411 274 8 86 492 80 474 3.96e-34 135
MS.gene015781.t1 AT5G27360 29.132 357 231 8 135 485 20 360 5.54e-34 132
MS.gene015781.t1 AT5G27360 29.132 357 231 8 135 485 20 360 5.54e-34 132
MS.gene015781.t1 AT5G18840 27.792 403 276 7 86 485 84 474 3.29e-33 132
MS.gene015781.t1 AT1G54730 26.585 410 268 8 34 441 39 417 3.79e-33 131
MS.gene015781.t1 AT3G05160 27.230 426 277 10 73 485 45 450 4.16e-33 131
MS.gene015781.t1 AT3G05150 27.696 408 270 9 86 485 75 465 4.65e-33 131
MS.gene015781.t1 AT3G05150 27.696 408 270 9 86 485 75 465 4.65e-33 131
MS.gene015781.t1 AT1G19450 27.251 411 282 7 86 490 89 488 6.52e-33 131
MS.gene015781.t1 AT3G05150 27.696 408 270 9 86 485 75 465 7.03e-33 131
MS.gene015781.t1 AT3G05165 26.794 418 289 7 73 485 54 459 8.09e-33 130
MS.gene015781.t1 AT3G05165 26.794 418 289 7 73 485 54 459 8.09e-33 130
MS.gene015781.t1 AT3G05165 26.794 418 289 7 73 485 54 459 8.09e-33 130
MS.gene015781.t1 AT1G54730 26.652 454 279 9 34 485 39 440 9.86e-33 130
MS.gene015781.t1 AT3G05160 27.206 408 267 9 88 485 14 401 1.57e-32 129
MS.gene015781.t1 AT3G05160 27.206 408 267 9 88 485 14 401 1.57e-32 129
MS.gene015781.t1 AT1G08920 26.555 418 261 10 86 485 72 461 7.21e-32 128
MS.gene015781.t1 AT1G08900 28.255 361 237 8 86 440 65 409 3.54e-31 125
MS.gene015781.t1 AT1G08920 26.118 425 261 10 86 485 72 468 7.39e-31 125
MS.gene015781.t1 AT4G04760 27.893 484 283 13 26 491 31 466 4.96e-30 123
MS.gene015781.t1 AT1G54730 26.098 410 249 9 34 441 39 396 6.99e-28 115
MS.gene015781.t1 AT3G05165 26.796 362 248 7 73 429 54 403 1.37e-27 116
MS.gene015781.t1 AT3G05165 26.796 362 248 7 73 429 54 403 1.69e-27 115
MS.gene015781.t1 AT3G05165 26.796 362 248 7 73 429 54 403 1.69e-27 115
MS.gene015781.t1 AT1G08920 26.203 374 230 10 86 441 72 417 2.60e-27 114
MS.gene015781.t1 AT1G54730 26.234 385 251 8 34 416 39 392 3.50e-27 114
MS.gene015781.t1 AT1G54730 26.234 385 251 8 34 416 39 392 3.50e-27 114
MS.gene015781.t1 AT3G51490 30.252 238 147 5 27 263 5 224 4.64e-26 112
MS.gene015781.t1 AT3G51490 30.252 238 147 5 27 263 5 224 4.92e-26 112
MS.gene015781.t1 AT1G54730 27.469 324 204 7 34 355 39 333 6.46e-26 108
MS.gene015781.t1 AT3G51490 35.057 174 111 2 91 263 2 174 9.38e-26 111
MS.gene015781.t1 AT1G79820 25.000 400 241 6 87 485 97 438 1.46e-25 109
MS.gene015781.t1 AT3G20460 26.150 413 269 10 86 485 93 482 1.61e-25 110
MS.gene015781.t1 AT5G27360 25.908 413 258 10 19 422 28 401 1.49e-24 106
MS.gene015781.t1 AT3G05155 26.449 276 180 7 86 355 67 325 4.92e-24 103
MS.gene015781.t1 AT5G17010 26.392 485 267 13 12 485 30 435 6.23e-24 104
MS.gene015781.t1 AT1G54730 26.101 318 204 6 32 348 38 325 1.84e-23 101
MS.gene015781.t1 AT1G54730 26.101 318 204 6 32 348 38 325 1.84e-23 101
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.78e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.95e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.95e-23 104
MS.gene015781.t1 AT4G35300 35.632 174 110 2 91 263 52 224 2.95e-23 104
MS.gene015781.t1 AT2G48020 26.552 290 192 6 86 368 68 343 1.37e-22 100
MS.gene015781.t1 AT1G54730 25.714 385 232 9 34 416 39 371 6.81e-22 98.2
MS.gene015781.t1 AT2G48020 26.812 276 182 5 86 355 68 329 1.01e-21 97.1
MS.gene015781.t1 AT1G79820 25.691 362 206 7 127 485 75 376 2.94e-20 93.2
MS.gene015781.t1 AT1G20840 31.609 174 117 2 91 263 50 222 1.66e-19 92.4
MS.gene015781.t1 AT1G20840 31.609 174 117 2 91 263 50 222 1.66e-19 92.4

Find 104 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTTGTTTGGGAATTT+TGG 0.137414 4.3:+2412888 MS.gene015781:CDS
GGATATGATCTTGGTGTTTC+AGG 0.160402 4.3:+2412166 MS.gene015781:CDS
GTAAGAAGATTCCATATTTA+AGG 0.160996 4.3:-2413915 None:intergenic
AACATTTATATGTTGATTAT+TGG 0.183002 4.3:+2412644 MS.gene015781:CDS
ATGGGAACTTGCTTTGTTTC+CGG 0.216465 4.3:-2413988 None:intergenic
CCAGCCATTGTTATGTTTAT+TGG 0.229033 4.3:+2412988 MS.gene015781:CDS
CTTTCAACTAACAACTTGTT+TGG 0.236475 4.3:+2412879 MS.gene015781:CDS
GCTCTTGGTGGCTCTCTCTT+TGG 0.250070 4.3:+2412145 MS.gene015781:CDS
ATTATTGGTCGTATCCTTCT+TGG 0.256145 4.3:+2412659 MS.gene015781:CDS
AATAGACCACAATTTGTAAT+TGG 0.260406 4.3:+2413195 MS.gene015781:CDS
GGTAGCTGCAGCAATTGTTT+TGG 0.266994 4.3:+2413660 MS.gene015781:intron
ATCCTTCTTGGCGTTGGAAT+TGG 0.286559 4.3:+2412671 MS.gene015781:CDS
GCAGCTGATCTTATCTCTAA+TGG 0.287553 4.3:-2413817 None:intergenic
AGACATTTCTGACAGATATA+AGG 0.298674 4.3:-2412824 None:intergenic
AATATGGCAGGTGGAGGATT+TGG 0.298867 4.3:+2412043 None:intergenic
TTTCATATTCTTTCTATTGC+CGG 0.305191 4.3:+2413969 MS.gene015781:CDS
TCACTCTGCCACCTTAAATA+TGG 0.307877 4.3:+2413904 MS.gene015781:CDS
GGAAGAGGCAAGAAAGGTTT+TGG 0.315780 4.3:+2413062 MS.gene015781:CDS
TGTTGAGAGAAGCAGCATTT+AGG 0.323015 4.3:-2412625 None:intergenic
TGTTTCCTCTCATACACATT+TGG 0.323425 4.3:-2412425 None:intergenic
TCTTGCATTGTTGGTGCTCT+TGG 0.323511 4.3:+2412130 MS.gene015781:CDS
CTTTATGAATACAAGATTAC+AGG 0.324011 4.3:+2412094 MS.gene015781:CDS
TGCAGGTGGAGTTACTTCTA+TGG 0.329077 4.3:+2412379 MS.gene015781:intron
TCTTCGAGAACCATTGGTTT+TGG 0.329646 4.3:+2414028 MS.gene015781:CDS
CTTGGCGTTGGAATTGGATT+TGG 0.338067 4.3:+2412677 MS.gene015781:CDS
TTTCTGTTTGTGTTGGGATT+TGG 0.344051 4.3:+2413748 MS.gene015781:CDS
TCTCTCTTTGGATATGATCT+TGG 0.345384 4.3:+2412157 MS.gene015781:CDS
GGTTCCATTAGCTTCTTCAT+TGG 0.349974 4.3:+2412596 MS.gene015781:CDS
CTCAAAAGAAGGTTCTGAAA+TGG 0.355481 4.3:-2413168 None:intergenic
CAGATCCAAATCCAAGAGTT+TGG 0.359984 4.3:-2413290 None:intergenic
TCTTGTGGAACAAGGCAAAA+TGG 0.361228 4.3:+2413041 MS.gene015781:CDS
GTTCTGAAATGGATTCTTGA+TGG 0.368445 4.3:-2413157 None:intergenic
CCTTGTTCCACAAGACTGTT+TGG 0.378394 4.3:-2413033 None:intergenic
TTTCAACTAACAACTTGTTT+GGG 0.390416 4.3:+2412880 MS.gene015781:CDS
GAGAAGATAAATCTCTTCAA+TGG 0.392608 4.3:-2414007 None:intergenic
GTTTCCTCTCATACACATTT+GGG 0.401650 4.3:-2412424 None:intergenic
CCAGTCAGTTGTTGGAATGC+AGG 0.407633 4.3:-2413231 None:intergenic
CAGCTGATCTTATCTCTAAT+GGG 0.408524 4.3:-2413816 None:intergenic
GTCTATTCTTTCTCAAAAGA+AGG 0.410688 4.3:-2413179 None:intergenic
TGTTGGGATTTGGAAGATCA+TGG 0.417917 4.3:+2413758 MS.gene015781:CDS
ACAAGACTGTTTGGTGTCTC+AGG 0.421620 4.3:-2413024 None:intergenic
GCCATTGTTATGTTTATTGG+TGG 0.426591 4.3:+2412991 MS.gene015781:CDS
TGCATTGTTGGTGCTCTTGG+TGG 0.427952 4.3:+2412133 MS.gene015781:CDS
GGAAGATCATGGGGACCCTT+AGG 0.430859 4.3:+2413769 MS.gene015781:CDS
ACAATTTGTAATTGGTGCAT+TGG 0.443499 4.3:+2413203 MS.gene015781:CDS
GACATTTCTGACAGATATAA+GGG 0.447933 4.3:-2412823 None:intergenic
CCAATAAACATAACAATGGC+TGG 0.453467 4.3:-2412988 None:intergenic
AGTTGTTTCCAGTCAGTTGT+TGG 0.455532 4.3:-2413239 None:intergenic
TTGGCTCTTGGGTTTGGTGA+TGG 0.456861 4.3:+2413679 MS.gene015781:CDS
AATGGAACCAACAACAATAC+TGG 0.458027 4.3:-2412582 None:intergenic
TCAAATTCAGCACCAACATT+AGG 0.458322 4.3:-2413102 None:intergenic
ATCTTCTCTTCGAGAACCAT+TGG 0.465257 4.3:+2414022 MS.gene015781:CDS
ATGGGGACCCTTAGGATGGT+TGG 0.470449 4.3:+2413777 MS.gene015781:CDS
GTGATGGTGGAAATCTCAAA+AGG 0.475636 4.3:+2412065 MS.gene015781:CDS
GGTGGAGGATTTGGTGATGG+TGG 0.478295 4.3:+2412052 MS.gene015781:CDS
CAAATCCAAGAGTTTGGAAA+AGG 0.479549 4.3:-2413284 None:intergenic
AGAAGATAAATCTCTTCAAT+GGG 0.487469 4.3:-2414006 None:intergenic
GATGGCAAACAATTATCATT+TGG 0.489457 4.3:+2413697 MS.gene015781:CDS
TGGGGATGGAGATTATCTCT+TGG 0.491578 4.3:+2412952 MS.gene015781:CDS
AGGAGAGCCAGTATTGTTGT+TGG 0.495148 4.3:+2412575 MS.gene015781:CDS
CAAAATGGAAGAGGCAAGAA+AGG 0.497536 4.3:+2413056 MS.gene015781:CDS
ACTTGGAACCAACCATCCTA+AGG 0.498385 4.3:-2413785 None:intergenic
GGTCGTATCCTTCTTGGCGT+TGG 0.503190 4.3:+2412665 MS.gene015781:CDS
AGCTCCAATGAAGAAGCTAA+TGG 0.508387 4.3:-2412600 None:intergenic
TCTAATGGGAAAAGCTCACT+TGG 0.515398 4.3:-2413802 None:intergenic
CGACCGAGCAAATTCATCCA+TGG 0.518915 4.3:+2412932 MS.gene015781:CDS
AGCAAATTCATCCATGGGGA+TGG 0.524714 4.3:+2412938 MS.gene015781:CDS
GACCGAGCAAATTCATCCAT+GGG 0.526464 4.3:+2412933 MS.gene015781:CDS
TGAGAGGAAACATGCACACT+TGG 0.539485 4.3:+2412436 MS.gene015781:CDS
TGGAAGAGATATGTAACAGA+TGG 0.539887 4.3:+2414048 MS.gene015781:CDS
GCAGGTGGAGGATTTGGTGA+TGG 0.542926 4.3:+2412049 MS.gene015781:CDS
TCCCCATGGATGAATTTGCT+CGG 0.552523 4.3:-2412935 None:intergenic
CCAAGAGTTTGGAAAAGGAC+AGG 0.554540 4.3:-2413279 None:intergenic
CCTGCATTCCAACAACTGAC+TGG 0.555304 4.3:+2413231 MS.gene015781:CDS
TGCTGAAATGTTCTTGTGCA+TGG 0.555889 4.3:+2413425 MS.gene015781:CDS
GTTGGGATTTGGAAGATCAT+GGG 0.557591 4.3:+2413759 MS.gene015781:CDS
TTTATGTTGACAAGTTTGGT+AGG 0.561260 4.3:+2413379 MS.gene015781:CDS
CATATCTCTTCCAAAACCAA+TGG 0.563898 4.3:-2414038 None:intergenic
ATCCAATTCCAACGCCAAGA+AGG 0.564783 4.3:-2412673 None:intergenic
CCAAACAGTCTTGTGGAACA+AGG 0.569116 4.3:+2413033 MS.gene015781:CDS
AATGCACCAATTACAAATTG+TGG 0.579575 4.3:-2413201 None:intergenic
GGAACAAGGCAAAATGGAAG+AGG 0.584145 4.3:+2413047 MS.gene015781:CDS
AAGGAAGAATTGTGCAACAA+TGG 0.584788 4.3:-2413878 None:intergenic
TCTTCCCAAATGTGTATGAG+AGG 0.590383 4.3:+2412420 MS.gene015781:CDS
GACAGGTGCATAGAAGAGGA+TGG 0.591217 4.3:-2413262 None:intergenic
GTTAGAGGTACGCCTAATGT+TGG 0.591447 4.3:+2413090 MS.gene015781:CDS
AGAAGATTCCATATTTAAGG+TGG 0.599343 4.3:-2413912 None:intergenic
TGGAATTGGATTTGGTAACC+AGG 0.602717 4.3:+2412685 MS.gene015781:CDS
GATCATGGGGACCCTTAGGA+TGG 0.603621 4.3:+2413773 MS.gene015781:CDS
AAAGGACAGGTGCATAGAAG+AGG 0.607711 4.3:-2413266 None:intergenic
TGATGGTGGAAATCTCAAAA+GGG 0.610629 4.3:+2412066 MS.gene015781:CDS
GGCAGCAAAGTATAGAGATG+AGG 0.611582 4.3:-2412507 None:intergenic
ACCACCAATAAACATAACAA+TGG 0.611653 4.3:-2412992 None:intergenic
TGAGACACCAAACAGTCTTG+TGG 0.611935 4.3:+2413026 MS.gene015781:CDS
TTGGGATTTGGAAGATCATG+GGG 0.614895 4.3:+2413760 MS.gene015781:CDS
AAGTTGTTAGTTGAAAGAGT+TGG 0.626985 4.3:-2412873 None:intergenic
CTTGGAACCAACCATCCTAA+GGG 0.630263 4.3:-2413784 None:intergenic
TTTATGAATACAAGATTACA+GGG 0.630488 4.3:+2412095 MS.gene015781:CDS
AGAGATAATCTCCATCCCCA+TGG 0.639595 4.3:-2412949 None:intergenic
ATGTCTCCTGCAAAAGTGAG+AGG 0.640100 4.3:+2412841 MS.gene015781:CDS
TAAGGTGGCAGAGTGATACA+AGG 0.640798 4.3:-2413897 None:intergenic
ATAAAACATTGAGATCAAAG+TGG 0.656717 4.3:-2413361 None:intergenic
ATCAGCTGCACAAAGTGTTG+TGG 0.674434 4.3:+2413831 MS.gene015781:CDS
ACCGAGCAAATTCATCCATG+GGG 0.697187 4.3:+2412934 MS.gene015781:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAGAAGAAAAAAAAGA+TGG - chr4.3:2413462-2413481 None:intergenic 15.0%
!!! AACATTTATATGTTGATTAT+TGG + chr4.3:2412644-2412663 MS.gene015781:CDS 15.0%
!!! TTTTGAAACATTATTTAAGT+AGG - chr4.3:2413489-2413508 None:intergenic 15.0%
!! AGAAAATCCATATTTGTTTA+AGG - chr4.3:2412299-2412318 None:intergenic 20.0%
!! CTTAAATAATGTTTCAAAAC+TGG + chr4.3:2413490-2413509 MS.gene015781:intron 20.0%
!! TTTATGAATACAAGATTACA+GGG + chr4.3:2412095-2412114 MS.gene015781:CDS 20.0%
!!! ACTTCTTGTTGTTATTATTT+AGG + chr4.3:2412795-2412814 MS.gene015781:intron 20.0%
!!! GGTTGAAATATATTTTTTCA+AGG + chr4.3:2413584-2413603 MS.gene015781:intron 20.0%
!!! GTTATGTTTGGTAATTTATT+AGG - chr4.3:2412245-2412264 None:intergenic 20.0%
!!! TGAAATATATTTTTTCAAGG+CGG + chr4.3:2413587-2413606 MS.gene015781:intron 20.0%
! AAACATAACATACCAATGTT+TGG + chr4.3:2412256-2412275 MS.gene015781:intron 25.0%
! AAACATTGGTATGTTATGTT+TGG - chr4.3:2412257-2412276 None:intergenic 25.0%
! AATAGACCACAATTTGTAAT+TGG + chr4.3:2413195-2413214 MS.gene015781:CDS 25.0%
! AATTAATTGATTATCCTTGC+AGG + chr4.3:2412362-2412381 MS.gene015781:intron 25.0%
! AGAAGATAAATCTCTTCAAT+GGG - chr4.3:2414009-2414028 None:intergenic 25.0%
! AGGATAATCAATTAATTGTC+AGG - chr4.3:2412359-2412378 None:intergenic 25.0%
! ATAAAACATTGAGATCAAAG+TGG - chr4.3:2413364-2413383 None:intergenic 25.0%
! CTTTATGAATACAAGATTAC+AGG + chr4.3:2412094-2412113 MS.gene015781:CDS 25.0%
! GGATAATCAATTAATTGTCA+GGG - chr4.3:2412358-2412377 None:intergenic 25.0%
! GTAAGAAGATTCCATATTTA+AGG - chr4.3:2413918-2413937 None:intergenic 25.0%
! GTCTTCACTCAAATTTAATT+GGG - chr4.3:2412325-2412344 None:intergenic 25.0%
! TTTCATATTCTTTCTATTGC+CGG + chr4.3:2413969-2413988 MS.gene015781:CDS 25.0%
!! ATGTTTTATGTTGACAAGTT+TGG + chr4.3:2413375-2413394 MS.gene015781:CDS 25.0%
!! TTTCAACTAACAACTTGTTT+GGG + chr4.3:2412880-2412899 MS.gene015781:CDS 25.0%
!!! GAAATATATTTTTTCAAGGC+GGG + chr4.3:2413588-2413607 MS.gene015781:intron 25.0%
AAGTTGTTAGTTGAAAGAGT+TGG - chr4.3:2412876-2412895 None:intergenic 30.0%
AATGCACCAATTACAAATTG+TGG - chr4.3:2413204-2413223 None:intergenic 30.0%
ACAATTTGTAATTGGTGCAT+TGG + chr4.3:2413203-2413222 MS.gene015781:CDS 30.0%
ACCACCAATAAACATAACAA+TGG - chr4.3:2412995-2413014 None:intergenic 30.0%
AGAAGATTCCATATTTAAGG+TGG - chr4.3:2413915-2413934 None:intergenic 30.0%
AGACATTTCTGACAGATATA+AGG - chr4.3:2412827-2412846 None:intergenic 30.0%
CCATAACAAAAAACAAAGGT+AGG + chr4.3:2412555-2412574 MS.gene015781:CDS 30.0%
GACATTTCTGACAGATATAA+GGG - chr4.3:2412826-2412845 None:intergenic 30.0%
GAGAAGATAAATCTCTTCAA+TGG - chr4.3:2414010-2414029 None:intergenic 30.0%
GATGGCAAACAATTATCATT+TGG + chr4.3:2413697-2413716 MS.gene015781:CDS 30.0%
GGTCTTCACTCAAATTTAAT+TGG - chr4.3:2412326-2412345 None:intergenic 30.0%
GTCTATTCTTTCTCAAAAGA+AGG - chr4.3:2413182-2413201 None:intergenic 30.0%
TAATTGTCAGGGACTAATTT+AGG - chr4.3:2412347-2412366 None:intergenic 30.0%
TCCTCCATAACAAAAAACAA+AGG + chr4.3:2412551-2412570 MS.gene015781:CDS 30.0%
TTTATGTTGACAAGTTTGGT+AGG + chr4.3:2413379-2413398 MS.gene015781:CDS 30.0%
! CTTTCAACTAACAACTTGTT+TGG + chr4.3:2412879-2412898 MS.gene015781:CDS 30.0%
! GTGATTTTTCTGTTTGTGTT+GGG + chr4.3:2413742-2413761 MS.gene015781:CDS 30.0%
! TGTGATTTTTCTGTTTGTGT+TGG + chr4.3:2413741-2413760 MS.gene015781:CDS 30.0%
! TTCATCTTTTCTTGCATTGT+TGG + chr4.3:2412121-2412140 MS.gene015781:CDS 30.0%
!! AACAACTTGTTTGGGAATTT+TGG + chr4.3:2412888-2412907 MS.gene015781:CDS 30.0%
!! AATGTTTGGTGTAAGAAACT+CGG + chr4.3:2412270-2412289 MS.gene015781:intron 30.0%
!!! ACCTTTGTTTTTTGTTATGG+AGG - chr4.3:2412555-2412574 None:intergenic 30.0%
!!! CCTACCTTTGTTTTTTGTTA+TGG - chr4.3:2412558-2412577 None:intergenic 30.0%
AAGGAAGAATTGTGCAACAA+TGG - chr4.3:2413881-2413900 None:intergenic 35.0%
AATGGAACCAACAACAATAC+TGG - chr4.3:2412585-2412604 None:intergenic 35.0%
ATTATTGGTCGTATCCTTCT+TGG + chr4.3:2412659-2412678 MS.gene015781:CDS 35.0%
CAAATCCAAGAGTTTGGAAA+AGG - chr4.3:2413287-2413306 None:intergenic 35.0%
CAGCTGATCTTATCTCTAAT+GGG - chr4.3:2413819-2413838 None:intergenic 35.0%
CATATCTCTTCCAAAACCAA+TGG - chr4.3:2414041-2414060 None:intergenic 35.0%
CCAATAAACATAACAATGGC+TGG - chr4.3:2412991-2413010 None:intergenic 35.0%
CCAGCCATTGTTATGTTTAT+TGG + chr4.3:2412988-2413007 MS.gene015781:CDS 35.0%
CCTAGAATCAATTAGTTCAC+CGG + chr4.3:2413532-2413551 MS.gene015781:intron 35.0%
GAGTTTCTTACACCAAACAT+TGG - chr4.3:2412271-2412290 None:intergenic 35.0%
GCCATTGTTATGTTTATTGG+TGG + chr4.3:2412991-2413010 MS.gene015781:CDS 35.0%
GTTTCCTCTCATACACATTT+GGG - chr4.3:2412427-2412446 None:intergenic 35.0%
TAATTGATTATCCTTGCAGG+TGG + chr4.3:2412365-2412384 MS.gene015781:intron 35.0%
TCAAATTCAGCACCAACATT+AGG - chr4.3:2413105-2413124 None:intergenic 35.0%
TCGGACACCTTAAACAAATA+TGG + chr4.3:2412289-2412308 MS.gene015781:intron 35.0%
TCTCTCTTTGGATATGATCT+TGG + chr4.3:2412157-2412176 MS.gene015781:CDS 35.0%
TGGAAGAGATATGTAACAGA+TGG + chr4.3:2414048-2414067 MS.gene015781:CDS 35.0%
TGTTTCCTCTCATACACATT+TGG - chr4.3:2412428-2412447 None:intergenic 35.0%
TTTCTGTTTGTGTTGGGATT+TGG + chr4.3:2413748-2413767 MS.gene015781:CDS 35.0%
! AATTGATTCTAGGTCGAACT+TGG - chr4.3:2413525-2413544 None:intergenic 35.0%
! CTTTTCCAAACTCTTGGATT+TGG + chr4.3:2413285-2413304 MS.gene015781:CDS 35.0%
! TTTGAAGCATTCAAGTTACC+TGG - chr4.3:2412706-2412725 None:intergenic 35.0%
!! CTCAAAAGAAGGTTCTGAAA+TGG - chr4.3:2413171-2413190 None:intergenic 35.0%
!! GTTCTGAAATGGATTCTTGA+TGG - chr4.3:2413160-2413179 None:intergenic 35.0%
!! TGATGGTGGAAATCTCAAAA+GGG + chr4.3:2412066-2412085 MS.gene015781:CDS 35.0%
!!! ATGAGACCATTTTGATTTGC+AGG + chr4.3:2413639-2413658 MS.gene015781:intron 35.0%
!!! ATTTGGTGTCAGTGTCTTTT+TGG + chr4.3:2413714-2413733 MS.gene015781:CDS 35.0%
!!! GGAATCTTCTTACTTTTTGC+TGG + chr4.3:2413925-2413944 MS.gene015781:CDS 35.0%
AACCAGACTCCAATGTAATC+GGG - chr4.3:2413568-2413587 None:intergenic 40.0%
AGCTCCAATGAAGAAGCTAA+TGG - chr4.3:2412603-2412622 None:intergenic 40.0%
ATCTTCTCTTCGAGAACCAT+TGG + chr4.3:2414022-2414041 MS.gene015781:CDS 40.0%
CAAAATGGAAGAGGCAAGAA+AGG + chr4.3:2413056-2413075 MS.gene015781:CDS 40.0%
CAACCAGACTCCAATGTAAT+CGG - chr4.3:2413569-2413588 None:intergenic 40.0%
CAGATCCAAATCCAAGAGTT+TGG - chr4.3:2413293-2413312 None:intergenic 40.0%
CAGCTACCTGCAAATCAAAA+TGG - chr4.3:2413648-2413667 None:intergenic 40.0%
CGCGAAAAATGTGGAAATCA+AGG - chr4.3:2412531-2412550 None:intergenic 40.0%
GAATCAATTAGTTCACCGGT+TGG + chr4.3:2413536-2413555 MS.gene015781:intron 40.0%
GCAGCTGATCTTATCTCTAA+TGG - chr4.3:2413820-2413839 None:intergenic 40.0%
GTTGGGATTTGGAAGATCAT+GGG + chr4.3:2413759-2413778 MS.gene015781:CDS 40.0%
TCACTCTGCCACCTTAAATA+TGG + chr4.3:2413904-2413923 MS.gene015781:CDS 40.0%
TCTAATGGGAAAAGCTCACT+TGG - chr4.3:2413805-2413824 None:intergenic 40.0%
TCTTCCCAAATGTGTATGAG+AGG + chr4.3:2412420-2412439 MS.gene015781:CDS 40.0%
TCTTGTGGAACAAGGCAAAA+TGG + chr4.3:2413041-2413060 MS.gene015781:CDS 40.0%
TGCTGAAATGTTCTTGTGCA+TGG + chr4.3:2413425-2413444 MS.gene015781:CDS 40.0%
TGGTTTGATCCCGATTACAT+TGG + chr4.3:2413556-2413575 MS.gene015781:intron 40.0%
TGTTGAGAGAAGCAGCATTT+AGG - chr4.3:2412628-2412647 None:intergenic 40.0%
TGTTGGGATTTGGAAGATCA+TGG + chr4.3:2413758-2413777 MS.gene015781:CDS 40.0%
TTGGGATTTGGAAGATCATG+GGG + chr4.3:2413760-2413779 MS.gene015781:CDS 40.0%
! AGTTGTTTCCAGTCAGTTGT+TGG - chr4.3:2413242-2413261 None:intergenic 40.0%
! CCGGTGAACTAATTGATTCT+AGG - chr4.3:2413535-2413554 None:intergenic 40.0%
! GGTTCCATTAGCTTCTTCAT+TGG + chr4.3:2412596-2412615 MS.gene015781:CDS 40.0%
! TGGAATTGGATTTGGTAACC+AGG + chr4.3:2412685-2412704 MS.gene015781:CDS 40.0%
! TGGTAGGAGAGCTTTCTTTT+TGG + chr4.3:2413395-2413414 MS.gene015781:CDS 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG + chr4.3:2413402-2413421 MS.gene015781:CDS 40.0%
!! ATGGGAACTTGCTTTGTTTC+CGG - chr4.3:2413991-2414010 None:intergenic 40.0%
!! GGATATGATCTTGGTGTTTC+AGG + chr4.3:2412166-2412185 MS.gene015781:CDS 40.0%
!! GGGAATTTTGGTAGCTAACT+TGG + chr4.3:2412900-2412919 MS.gene015781:CDS 40.0%
!! GTGATGGTGGAAATCTCAAA+AGG + chr4.3:2412065-2412084 MS.gene015781:CDS 40.0%
!!! AAGGTTTTGGAGAGAGTTAG+AGG + chr4.3:2413075-2413094 MS.gene015781:CDS 40.0%
!!! ATTGTTTTGGCTCTTGGGTT+TGG + chr4.3:2413673-2413692 MS.gene015781:CDS 40.0%
!!! CAGCAATTGTTTTGGCTCTT+GGG + chr4.3:2413668-2413687 MS.gene015781:CDS 40.0%
!!! TCTTCGAGAACCATTGGTTT+TGG + chr4.3:2414028-2414047 MS.gene015781:CDS 40.0%
AAAGGACAGGTGCATAGAAG+AGG - chr4.3:2413269-2413288 None:intergenic 45.0%
ACCGAGCAAATTCATCCATG+GGG + chr4.3:2412934-2412953 MS.gene015781:CDS 45.0%
ACTTGGAACCAACCATCCTA+AGG - chr4.3:2413788-2413807 None:intergenic 45.0%
AGAGATAATCTCCATCCCCA+TGG - chr4.3:2412952-2412971 None:intergenic 45.0%
AGCAAATTCATCCATGGGGA+TGG + chr4.3:2412938-2412957 MS.gene015781:CDS 45.0%
AGGAGAGCCAGTATTGTTGT+TGG + chr4.3:2412575-2412594 MS.gene015781:CDS 45.0%
ATCCAATTCCAACGCCAAGA+AGG - chr4.3:2412676-2412695 None:intergenic 45.0%
ATCCCGATTACATTGGAGTC+TGG + chr4.3:2413563-2413582 MS.gene015781:intron 45.0%
ATGTCTCCTGCAAAAGTGAG+AGG + chr4.3:2412841-2412860 MS.gene015781:CDS 45.0%
CCAAGAGTTTGGAAAAGGAC+AGG - chr4.3:2413282-2413301 None:intergenic 45.0%
CCTTGTTCCACAAGACTGTT+TGG - chr4.3:2413036-2413055 None:intergenic 45.0%
CTTGGAACCAACCATCCTAA+GGG - chr4.3:2413787-2413806 None:intergenic 45.0%
GACCGAGCAAATTCATCCAT+GGG + chr4.3:2412933-2412952 MS.gene015781:CDS 45.0%
GGAACAAGGCAAAATGGAAG+AGG + chr4.3:2413047-2413066 MS.gene015781:CDS 45.0%
GGCAGCAAAGTATAGAGATG+AGG - chr4.3:2412510-2412529 None:intergenic 45.0%
GTAATCGGGATCAAACCAAC+CGG - chr4.3:2413554-2413573 None:intergenic 45.0%
TAAGGTGGCAGAGTGATACA+AGG - chr4.3:2413900-2413919 None:intergenic 45.0%
TAGAAGTAACTCCACCTGCA+AGG - chr4.3:2412379-2412398 None:intergenic 45.0%
TATGGAGGACGCGAAAAATG+TGG - chr4.3:2412540-2412559 None:intergenic 45.0%
TGAGACACCAAACAGTCTTG+TGG + chr4.3:2413026-2413045 MS.gene015781:CDS 45.0%
TGAGAGGAAACATGCACACT+TGG + chr4.3:2412436-2412455 MS.gene015781:CDS 45.0%
TGCAGGTGGAGTTACTTCTA+TGG + chr4.3:2412379-2412398 MS.gene015781:intron 45.0%
TGGGGATGGAGATTATCTCT+TGG + chr4.3:2412952-2412971 MS.gene015781:CDS 45.0%
! ATCCTTCTTGGCGTTGGAAT+TGG + chr4.3:2412671-2412690 MS.gene015781:CDS 45.0%
! CCAAACAGTCTTGTGGAACA+AGG + chr4.3:2413033-2413052 MS.gene015781:CDS 45.0%
! CCTGTCCTTTTCCAAACTCT+TGG + chr4.3:2413279-2413298 MS.gene015781:CDS 45.0%
! CTAGGTCGAACTTGGTAGTT+CGG - chr4.3:2413517-2413536 None:intergenic 45.0%
! CTTGGCGTTGGAATTGGATT+TGG + chr4.3:2412677-2412696 MS.gene015781:CDS 45.0%
! GGAAGAGGCAAGAAAGGTTT+TGG + chr4.3:2413062-2413081 MS.gene015781:CDS 45.0%
! GGTAGCTGCAGCAATTGTTT+TGG + chr4.3:2413660-2413679 MS.gene015781:intron 45.0%
! GTTAGAGGTACGCCTAATGT+TGG + chr4.3:2413090-2413109 MS.gene015781:CDS 45.0%
! TCCCCATGGATGAATTTGCT+CGG - chr4.3:2412938-2412957 None:intergenic 45.0%
! TCTTGCATTGTTGGTGCTCT+TGG + chr4.3:2412130-2412149 MS.gene015781:CDS 45.0%
!! ACAAGACTGTTTGGTGTCTC+AGG - chr4.3:2413027-2413046 None:intergenic 45.0%
!! ATCAGCTGCACAAAGTGTTG+TGG + chr4.3:2413831-2413850 MS.gene015781:CDS 45.0%
!!! GCAGCAATTGTTTTGGCTCT+TGG + chr4.3:2413667-2413686 MS.gene015781:CDS 45.0%
CCAGTCAGTTGTTGGAATGC+AGG - chr4.3:2413234-2413253 None:intergenic 50.0%
CCTGCATTCCAACAACTGAC+TGG + chr4.3:2413231-2413250 MS.gene015781:CDS 50.0%
CGACCGAGCAAATTCATCCA+TGG + chr4.3:2412932-2412951 MS.gene015781:CDS 50.0%
GACAGGTGCATAGAAGAGGA+TGG - chr4.3:2413265-2413284 None:intergenic 50.0%
! TGCATTGTTGGTGCTCTTGG+TGG + chr4.3:2412133-2412152 MS.gene015781:CDS 50.0%
!! ACTGCTCCTCTCACTTTTGC+AGG - chr4.3:2412850-2412869 None:intergenic 50.0%
!! TTGGCTCTTGGGTTTGGTGA+TGG + chr4.3:2413679-2413698 MS.gene015781:CDS 50.0%
ATGGGGACCCTTAGGATGGT+TGG + chr4.3:2413777-2413796 MS.gene015781:CDS 55.0%
GATCATGGGGACCCTTAGGA+TGG + chr4.3:2413773-2413792 MS.gene015781:CDS 55.0%
GGAAGATCATGGGGACCCTT+AGG + chr4.3:2413769-2413788 MS.gene015781:CDS 55.0%
GGTCGTATCCTTCTTGGCGT+TGG + chr4.3:2412665-2412684 MS.gene015781:CDS 55.0%
! GCTCTTGGTGGCTCTCTCTT+TGG + chr4.3:2412145-2412164 MS.gene015781:CDS 55.0%
!! GCAGGTGGAGGATTTGGTGA+TGG + chr4.3:2412049-2412068 MS.gene015781:CDS 55.0%
!! GGTGGAGGATTTGGTGATGG+TGG + chr4.3:2412052-2412071 MS.gene015781:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 2412046 2414104 2412046 ID=MS.gene015781
chr4.3 mRNA 2412046 2414104 2412046 ID=MS.gene015781.t1;Parent=MS.gene015781
chr4.3 exon 2412046 2412187 2412046 ID=MS.gene015781.t1.exon1;Parent=MS.gene015781.t1
chr4.3 CDS 2412046 2412187 2412046 ID=cds.MS.gene015781.t1;Parent=MS.gene015781.t1
chr4.3 exon 2412384 2412706 2412384 ID=MS.gene015781.t1.exon2;Parent=MS.gene015781.t1
chr4.3 CDS 2412384 2412706 2412384 ID=cds.MS.gene015781.t1;Parent=MS.gene015781.t1
chr4.3 exon 2412817 2413446 2412817 ID=MS.gene015781.t1.exon3;Parent=MS.gene015781.t1
chr4.3 CDS 2412817 2413446 2412817 ID=cds.MS.gene015781.t1;Parent=MS.gene015781.t1
chr4.3 exon 2413661 2414104 2413661 ID=MS.gene015781.t1.exon4;Parent=MS.gene015781.t1
chr4.3 CDS 2413661 2414104 2413661 ID=cds.MS.gene015781.t1;Parent=MS.gene015781.t1
Gene Sequence

>MS.gene015781

ATGGCAGGTGGAGGATTTGGTGATGGTGGAAATCTCAAAAGGGCTCATCTTTATGAATACAAGATTACAGGGTACTTCATCTTTTCTTGCATTGTTGGTGCTCTTGGTGGCTCTCTCTTTGGATATGATCTTGGTGTTTCAGGTGAGAGTGAATGTTTTATCAATTGTCAATTCTCACATTGTCATATAAATATTACCTAATAAATTACCAAACATAACATACCAATGTTTGGTGTAAGAAACTCGGACACCTTAAACAAATATGGATTTTCTCGTCCCAATTAAATTTGAGTGAAGACCTAAATTAGTCCCTGACAATTAATTGATTATCCTTGCAGGTGGAGTTACTTCTATGGATGATTTCTTGAAAGAATTCTTCCCAAATGTGTATGAGAGGAAACATGCACACTTGGCAGAAACAGATTATTGTAAATATGATGATCAAATGTTGACACTTTTCACCTCATCTCTATACTTTGCTGCCTTGATTTCCACATTTTTCGCGTCCTCCATAACAAAAAACAAAGGTAGGAGAGCCAGTATTGTTGTTGGTTCCATTAGCTTCTTCATTGGAGCTGTCCTAAATGCTGCTTCTCTCAACATTTATATGTTGATTATTGGTCGTATCCTTCTTGGCGTTGGAATTGGATTTGGTAACCAGGTAACTTGAATGCTTCAAAATGATAAATAATGAGTTTATGTCAATACACACACACACACACACACACACACGTGTGTGTTATAAACTAACTTCTTGTTGTTATTATTTAGGCTGTTCCCTTATATCTGTCAGAAATGTCTCCTGCAAAAGTGAGAGGAGCAGTGAACCAACTCTTTCAACTAACAACTTGTTTGGGAATTTTGGTAGCTAACTTGGTAAATTATGCGACCGAGCAAATTCATCCATGGGGATGGAGATTATCTCTTGGTTTAGCAGTAGTTCCAGCCATTGTTATGTTTATTGGTGGTTTGTTGTGTCCTGAGACACCAAACAGTCTTGTGGAACAAGGCAAAATGGAAGAGGCAAGAAAGGTTTTGGAGAGAGTTAGAGGTACGCCTAATGTTGGTGCTGAATTTGAAGATCTTGTTGAAGCAAGCAGAGAAGCACAAGCCATCAAGAATCCATTTCAGAACCTTCTTTTGAGAAAGAATAGACCACAATTTGTAATTGGTGCATTGGCTATTCCTGCATTCCAACAACTGACTGGAAACAACTCCATCCTCTTCTATGCACCTGTCCTTTTCCAAACTCTTGGATTTGGATCTGCTGCATCTCTTTATTCTTCTGTCATCACTAGTATTGCACTTGTTCTTGCCACTTTGATCTCAATGTTTTATGTTGACAAGTTTGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTGCTGAAATGTTCTTGTGCATGGTAAGTACTACACCATCTTTTTTTTCTTCTTAATTTTCACCTACTTAAATAATGTTTCAAAACTGGACCGAACTACCAAGTTCGACCTAGAATCAATTAGTTCACCGGTTGGTTTGATCCCGATTACATTGGAGTCTGGTTGAAATATATTTTTTCAAGGCGGGTCGATTTAACTGATTTTAATGCTAATATATGAGACCATTTTGATTTGCAGGTAGCTGCAGCAATTGTTTTGGCTCTTGGGTTTGGTGATGGCAAACAATTATCATTTGGTGTCAGTGTCTTTTTGGTTATTGTGATTTTTCTGTTTGTGTTGGGATTTGGAAGATCATGGGGACCCTTAGGATGGTTGGTTCCAAGTGAGCTTTTCCCATTAGAGATAAGATCAGCTGCACAAAGTGTTGTGGTGTGTGTTAACATGATCTTCACTGCCATTGTTGCACAATTCTTCCTTGTATCACTCTGCCACCTTAAATATGGAATCTTCTTACTTTTTGCTGGCTTGATTCTCGTCATGAGTCTTTTCATATTCTTTCTATTGCCGGAAACAAAGCAAGTTCCCATTGAAGAGATTTATCTTCTCTTCGAGAACCATTGGTTTTGGAAGAGATATGTAACAGATGGAAATCAAGAGAGAGCATCAAATGAACATGCATAA
Protein sequence

>MS.gene015781.t1

MAGGGFGDGGNLKRAHLYEYKITGYFIFSCIVGALGGSLFGYDLGVSGGVTSMDDFLKEFFPNVYERKHAHLAETDYCKYDDQMLTLFTSSLYFAALISTFFASSITKNKGRRASIVVGSISFFIGAVLNAASLNIYMLIIGRILLGVGIGFGNQAVPLYLSEMSPAKVRGAVNQLFQLTTCLGILVANLVNYATEQIHPWGWRLSLGLAVVPAIVMFIGGLLCPETPNSLVEQGKMEEARKVLERVRGTPNVGAEFEDLVEASREAQAIKNPFQNLLLRKNRPQFVIGALAIPAFQQLTGNNSILFYAPVLFQTLGFGSAASLYSSVITSIALVLATLISMFYVDKFGRRAFFLEAGAEMFLCMVAAAIVLALGFGDGKQLSFGVSVFLVIVIFLFVLGFGRSWGPLGWLVPSELFPLEIRSAAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAGLILVMSLFIFFLLPETKQVPIEEIYLLFENHWFWKRYVTDGNQERASNEHA