Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024888.t1 | XP_003610701.1 | 96.2 | 530 | 11 | 2 | 1 | 530 | 1 | 521 | 7.00E-283 | 982.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024888.t1 | Q94AZ2 | 81.9 | 531 | 90 | 3 | 1 | 530 | 1 | 526 | 1.7e-245 | 849.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024888.t1 | G7K2C5 | 96.2 | 530 | 11 | 2 | 1 | 530 | 1 | 521 | 5.1e-283 | 982.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene049090 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene073258 | PPI |
MS.gene049091 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene059585 | PPI |
MS.gene05884 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene059586 | PPI |
MS.gene031307 | MS.gene024888 | PPI |
MS.gene69039 | MS.gene024888 | PPI |
MS.gene032073 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene72231 | PPI |
MS.gene72232 | MS.gene024888 | PPI |
MS.gene031308 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene061460 | PPI |
MS.gene032072 | MS.gene024888 | PPI |
MS.gene84416 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene98665 | PPI |
MS.gene04727 | MS.gene024888 | PPI |
MS.gene56551 | MS.gene024888 | PPI |
MS.gene061459 | MS.gene024888 | PPI |
MS.gene69038 | MS.gene024888 | PPI |
MS.gene068492 | MS.gene024888 | PPI |
MS.gene015782 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene015781 | PPI |
MS.gene05885 | MS.gene024888 | PPI |
MS.gene024888 | MS.gene04728 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024888.t1 | MTR_5g006070 | 96.226 | 530 | 11 | 2 | 1 | 530 | 1 | 521 | 0.0 | 1029 |
MS.gene024888.t1 | MTR_5g006070 | 96.058 | 482 | 10 | 2 | 49 | 530 | 1 | 473 | 0.0 | 936 |
MS.gene024888.t1 | MTR_1g104780 | 82.879 | 514 | 87 | 1 | 1 | 513 | 1 | 514 | 0.0 | 838 |
MS.gene024888.t1 | MTR_1g104750 | 72.655 | 501 | 133 | 3 | 1 | 499 | 1 | 499 | 0.0 | 751 |
MS.gene024888.t1 | MTR_1g104770 | 72.854 | 501 | 133 | 2 | 1 | 499 | 1 | 500 | 0.0 | 747 |
MS.gene024888.t1 | MTR_5g094760 | 59.091 | 506 | 197 | 5 | 1 | 501 | 1 | 501 | 0.0 | 610 |
MS.gene024888.t1 | MTR_0204s0020 | 57.085 | 494 | 207 | 4 | 5 | 498 | 4 | 492 | 0.0 | 602 |
MS.gene024888.t1 | MTR_3g008160 | 56.313 | 499 | 214 | 4 | 9 | 506 | 10 | 505 | 0.0 | 596 |
MS.gene024888.t1 | MTR_7g091690 | 58.135 | 504 | 199 | 6 | 1 | 498 | 1 | 498 | 0.0 | 596 |
MS.gene024888.t1 | MTR_0204s0020 | 56.680 | 494 | 206 | 5 | 5 | 498 | 4 | 489 | 0.0 | 592 |
MS.gene024888.t1 | MTR_5g082540 | 56.556 | 511 | 215 | 4 | 2 | 508 | 3 | 510 | 0.0 | 589 |
MS.gene024888.t1 | MTR_4g116790 | 54.960 | 504 | 220 | 5 | 3 | 504 | 6 | 504 | 0.0 | 585 |
MS.gene024888.t1 | MTR_0204s0040 | 55.400 | 500 | 217 | 6 | 3 | 501 | 9 | 503 | 0.0 | 577 |
MS.gene024888.t1 | MTR_4g116770 | 55.400 | 500 | 217 | 6 | 3 | 501 | 205 | 699 | 0.0 | 577 |
MS.gene024888.t1 | MTR_4g091370 | 60.198 | 505 | 196 | 4 | 13 | 514 | 14 | 516 | 0.0 | 573 |
MS.gene024888.t1 | MTR_1g038630 | 56.031 | 514 | 215 | 6 | 1 | 507 | 1 | 510 | 0.0 | 572 |
MS.gene024888.t1 | MTR_6g087040 | 56.324 | 506 | 212 | 6 | 1 | 501 | 1 | 502 | 0.0 | 560 |
MS.gene024888.t1 | MTR_6g088375 | 56.324 | 506 | 212 | 6 | 1 | 501 | 1 | 502 | 0.0 | 560 |
MS.gene024888.t1 | MTR_3g008170 | 53.862 | 492 | 222 | 5 | 16 | 505 | 17 | 505 | 0.0 | 550 |
MS.gene024888.t1 | MTR_5g041550 | 54.781 | 502 | 223 | 3 | 1 | 499 | 1 | 501 | 0.0 | 548 |
MS.gene024888.t1 | MTR_0009s0370 | 52.778 | 504 | 235 | 2 | 10 | 511 | 9 | 511 | 0.0 | 544 |
MS.gene024888.t1 | MTR_3g093010 | 54.134 | 508 | 228 | 3 | 1 | 504 | 1 | 507 | 0.0 | 543 |
MS.gene024888.t1 | MTR_8g102860 | 53.333 | 495 | 224 | 6 | 14 | 506 | 18 | 507 | 0.0 | 542 |
MS.gene024888.t1 | MTR_3g008160 | 55.556 | 459 | 200 | 4 | 49 | 506 | 1 | 456 | 0.0 | 540 |
MS.gene024888.t1 | MTR_4g090600 | 56.634 | 505 | 212 | 5 | 1 | 501 | 1 | 502 | 0.0 | 533 |
MS.gene024888.t1 | MTR_1g038600 | 53.021 | 513 | 214 | 6 | 1 | 507 | 1 | 492 | 0.0 | 532 |
MS.gene024888.t1 | MTR_3g023480 | 52.314 | 497 | 234 | 2 | 13 | 507 | 12 | 507 | 0.0 | 526 |
MS.gene024888.t1 | MTR_3g074410 | 49.023 | 512 | 247 | 9 | 1 | 505 | 1 | 505 | 1.02e-178 | 513 |
MS.gene024888.t1 | MTR_3g074390 | 49.693 | 489 | 236 | 7 | 17 | 501 | 23 | 505 | 1.29e-176 | 508 |
MS.gene024888.t1 | MTR_8g102860 | 53.261 | 460 | 208 | 6 | 49 | 506 | 1 | 455 | 5.89e-175 | 501 |
MS.gene024888.t1 | MTR_3g074270 | 47.610 | 502 | 235 | 7 | 1 | 499 | 1 | 477 | 9.59e-170 | 489 |
MS.gene024888.t1 | MTR_3g007910 | 48.814 | 506 | 224 | 4 | 1 | 504 | 1 | 473 | 1.35e-167 | 483 |
MS.gene024888.t1 | MTR_3g093060 | 53.982 | 452 | 204 | 3 | 49 | 497 | 1 | 451 | 1.20e-165 | 478 |
MS.gene024888.t1 | MTR_4g116790 | 51.791 | 363 | 170 | 3 | 3 | 363 | 6 | 365 | 2.79e-135 | 397 |
MS.gene024888.t1 | MTR_3g074380 | 49.730 | 370 | 174 | 6 | 1 | 363 | 1 | 365 | 4.96e-120 | 358 |
MS.gene024888.t1 | MTR_3g074340 | 44.582 | 323 | 173 | 5 | 188 | 507 | 20 | 339 | 3.33e-104 | 316 |
MS.gene024888.t1 | MTR_3g074320 | 44.582 | 323 | 173 | 5 | 188 | 507 | 20 | 339 | 5.36e-104 | 316 |
MS.gene024888.t1 | MTR_3g074370 | 43.963 | 323 | 175 | 5 | 188 | 507 | 20 | 339 | 1.63e-102 | 312 |
MS.gene024888.t1 | MTR_3g074400 | 37.093 | 461 | 221 | 11 | 49 | 481 | 1 | 420 | 9.61e-93 | 290 |
MS.gene024888.t1 | MTR_6g088450 | 30.022 | 463 | 285 | 10 | 27 | 476 | 63 | 499 | 2.56e-58 | 202 |
MS.gene024888.t1 | MTR_4g069500 | 28.762 | 525 | 318 | 11 | 13 | 509 | 17 | 513 | 5.33e-58 | 201 |
MS.gene024888.t1 | MTR_1g116660 | 29.259 | 499 | 320 | 11 | 20 | 511 | 33 | 505 | 5.45e-57 | 198 |
MS.gene024888.t1 | MTR_3g084110 | 28.682 | 516 | 325 | 12 | 6 | 507 | 3 | 489 | 1.23e-56 | 197 |
MS.gene024888.t1 | MTR_7g005910 | 30.435 | 483 | 294 | 13 | 20 | 491 | 31 | 482 | 2.53e-56 | 196 |
MS.gene024888.t1 | MTR_4g069500 | 29.694 | 458 | 291 | 8 | 76 | 509 | 13 | 463 | 2.84e-56 | 196 |
MS.gene024888.t1 | MTR_4g072030 | 28.846 | 520 | 315 | 12 | 26 | 524 | 31 | 516 | 5.63e-56 | 196 |
MS.gene024888.t1 | MTR_3g116240 | 29.000 | 500 | 299 | 11 | 13 | 483 | 15 | 487 | 1.22e-55 | 195 |
MS.gene024888.t1 | MTR_1g116650 | 29.218 | 486 | 305 | 7 | 20 | 499 | 76 | 528 | 1.05e-54 | 193 |
MS.gene024888.t1 | MTR_8g103500 | 27.235 | 481 | 310 | 8 | 17 | 483 | 13 | 467 | 9.04e-51 | 181 |
MS.gene024888.t1 | MTR_2g049020 | 33.693 | 371 | 216 | 9 | 20 | 382 | 24 | 372 | 1.19e-50 | 182 |
MS.gene024888.t1 | MTR_5g075300 | 27.977 | 529 | 318 | 13 | 12 | 513 | 6 | 498 | 3.23e-50 | 180 |
MS.gene024888.t1 | MTR_5g096000 | 51.913 | 183 | 68 | 2 | 1 | 183 | 1 | 163 | 3.83e-49 | 172 |
MS.gene024888.t1 | MTR_5g096000 | 53.030 | 132 | 61 | 1 | 373 | 504 | 174 | 304 | 3.86e-36 | 137 |
MS.gene024888.t1 | MTR_7g446340 | 26.327 | 490 | 318 | 12 | 23 | 499 | 55 | 514 | 4.20e-49 | 177 |
MS.gene024888.t1 | MTR_6g007340 | 26.327 | 490 | 318 | 12 | 23 | 499 | 55 | 514 | 4.20e-49 | 177 |
MS.gene024888.t1 | MTR_8g077890 | 30.353 | 425 | 267 | 7 | 83 | 483 | 59 | 478 | 4.28e-49 | 177 |
MS.gene024888.t1 | MTR_5g077580 | 26.943 | 579 | 298 | 15 | 20 | 509 | 24 | 566 | 2.30e-47 | 173 |
MS.gene024888.t1 | MTR_2g048720 | 33.333 | 354 | 208 | 7 | 20 | 367 | 24 | 355 | 7.69e-47 | 172 |
MS.gene024888.t1 | MTR_2g013310 | 26.271 | 472 | 309 | 10 | 23 | 483 | 53 | 496 | 3.99e-46 | 169 |
MS.gene024888.t1 | MTR_2g013310 | 27.723 | 404 | 277 | 7 | 89 | 483 | 26 | 423 | 5.87e-46 | 167 |
MS.gene024888.t1 | MTR_4g077740 | 28.099 | 484 | 298 | 11 | 23 | 486 | 46 | 499 | 1.25e-45 | 167 |
MS.gene024888.t1 | MTR_3g074330 | 54.658 | 161 | 61 | 4 | 1 | 152 | 1 | 158 | 1.72e-45 | 158 |
MS.gene024888.t1 | MTR_3g074360 | 54.658 | 161 | 61 | 4 | 1 | 152 | 1 | 158 | 1.72e-45 | 158 |
MS.gene024888.t1 | MTR_6g018790 | 27.824 | 478 | 306 | 11 | 12 | 486 | 99 | 540 | 4.01e-45 | 167 |
MS.gene024888.t1 | MTR_3g074310 | 54.037 | 161 | 62 | 4 | 1 | 152 | 1 | 158 | 1.09e-44 | 155 |
MS.gene024888.t1 | MTR_7g113960 | 26.408 | 515 | 317 | 10 | 19 | 530 | 24 | 479 | 1.40e-43 | 161 |
MS.gene024888.t1 | MTR_2g026160 | 29.500 | 400 | 240 | 8 | 1 | 382 | 1 | 376 | 2.91e-43 | 162 |
MS.gene024888.t1 | MTR_7g082270 | 27.883 | 477 | 307 | 11 | 12 | 486 | 59 | 500 | 9.14e-43 | 159 |
MS.gene024888.t1 | MTR_8g077310 | 29.710 | 414 | 279 | 5 | 73 | 483 | 77 | 481 | 9.85e-43 | 159 |
MS.gene024888.t1 | MTR_7g113970 | 27.861 | 402 | 275 | 5 | 84 | 483 | 103 | 491 | 2.57e-42 | 158 |
MS.gene024888.t1 | MTR_8g077310 | 30.556 | 396 | 259 | 6 | 91 | 483 | 2 | 384 | 3.57e-42 | 155 |
MS.gene024888.t1 | MTR_1g038620 | 46.497 | 157 | 67 | 2 | 204 | 360 | 50 | 189 | 2.03e-40 | 145 |
MS.gene024888.t1 | MTR_1g022315 | 31.429 | 385 | 247 | 7 | 107 | 485 | 14 | 387 | 1.95e-39 | 148 |
MS.gene024888.t1 | MTR_1g022315 | 29.325 | 474 | 296 | 11 | 19 | 485 | 45 | 486 | 2.81e-39 | 149 |
MS.gene024888.t1 | MTR_5g020270 | 29.798 | 396 | 262 | 6 | 91 | 483 | 2 | 384 | 5.12e-39 | 147 |
MS.gene024888.t1 | MTR_5g020270 | 29.208 | 404 | 274 | 5 | 83 | 483 | 90 | 484 | 6.51e-39 | 149 |
MS.gene024888.t1 | MTR_5g019870 | 27.972 | 429 | 287 | 7 | 76 | 483 | 48 | 475 | 2.92e-38 | 147 |
MS.gene024888.t1 | MTR_8g077300 | 29.064 | 406 | 272 | 7 | 83 | 483 | 79 | 473 | 5.65e-38 | 145 |
MS.gene024888.t1 | MTR_7g082270 | 27.512 | 418 | 268 | 9 | 12 | 428 | 59 | 442 | 2.94e-37 | 144 |
MS.gene024888.t1 | MTR_4g118610 | 27.137 | 468 | 300 | 9 | 21 | 483 | 51 | 482 | 1.53e-35 | 139 |
MS.gene024888.t1 | MTR_7g094450 | 25.799 | 407 | 287 | 5 | 83 | 487 | 80 | 473 | 2.15e-35 | 138 |
MS.gene024888.t1 | MTR_4g013205 | 25.277 | 451 | 316 | 8 | 46 | 491 | 42 | 476 | 4.03e-35 | 137 |
MS.gene024888.t1 | MTR_3g080240 | 25.641 | 468 | 304 | 13 | 27 | 486 | 98 | 529 | 8.34e-35 | 137 |
MS.gene024888.t1 | MTR_4g069500 | 30.211 | 331 | 200 | 8 | 203 | 509 | 1 | 324 | 8.77e-35 | 134 |
MS.gene024888.t1 | MTR_6g087910 | 26.972 | 393 | 273 | 6 | 93 | 483 | 102 | 482 | 1.02e-34 | 137 |
MS.gene024888.t1 | MTR_2g020710 | 26.652 | 469 | 301 | 12 | 21 | 483 | 48 | 479 | 1.83e-34 | 136 |
MS.gene024888.t1 | MTR_2g020710 | 28.079 | 406 | 270 | 10 | 84 | 483 | 1 | 390 | 1.87e-34 | 134 |
MS.gene024888.t1 | MTR_2g026140 | 28.338 | 367 | 214 | 9 | 28 | 381 | 30 | 360 | 3.03e-33 | 133 |
MS.gene024888.t1 | MTR_8g077310 | 30.699 | 329 | 215 | 5 | 73 | 399 | 77 | 394 | 5.09e-33 | 130 |
MS.gene024888.t1 | MTR_7g094110 | 25.307 | 407 | 289 | 5 | 83 | 487 | 82 | 475 | 1.20e-31 | 127 |
MS.gene024888.t1 | MTR_0064s0040 | 44.079 | 152 | 65 | 3 | 13 | 161 | 15 | 149 | 3.47e-31 | 118 |
MS.gene024888.t1 | MTR_5g020270 | 27.792 | 403 | 260 | 7 | 83 | 483 | 90 | 463 | 1.31e-30 | 124 |
MS.gene024888.t1 | MTR_4g064820 | 29.006 | 362 | 224 | 9 | 22 | 366 | 96 | 441 | 1.89e-30 | 124 |
MS.gene024888.t1 | MTR_7g113960 | 28.571 | 336 | 207 | 7 | 19 | 352 | 24 | 328 | 2.72e-29 | 119 |
MS.gene024888.t1 | MTR_7g113970 | 28.727 | 275 | 184 | 4 | 84 | 356 | 103 | 367 | 4.26e-29 | 119 |
MS.gene024888.t1 | MTR_1g114280 | 37.419 | 155 | 76 | 4 | 347 | 500 | 21 | 155 | 5.14e-25 | 101 |
MS.gene024888.t1 | MTR_7g094110 | 24.079 | 407 | 274 | 5 | 83 | 487 | 82 | 455 | 5.98e-25 | 108 |
MS.gene024888.t1 | MTR_4g118610 | 28.274 | 336 | 221 | 7 | 83 | 413 | 92 | 412 | 1.65e-24 | 106 |
MS.gene024888.t1 | MTR_2g020710 | 26.316 | 399 | 251 | 12 | 21 | 413 | 48 | 409 | 3.21e-24 | 105 |
MS.gene024888.t1 | MTR_2g020710 | 26.087 | 414 | 263 | 12 | 21 | 428 | 48 | 424 | 3.32e-24 | 105 |
MS.gene024888.t1 | MTR_2g020710 | 28.035 | 346 | 209 | 12 | 21 | 360 | 48 | 359 | 4.76e-23 | 101 |
MS.gene024888.t1 | MTR_3g116060 | 35.443 | 158 | 96 | 3 | 107 | 261 | 68 | 222 | 1.28e-18 | 89.7 |
MS.gene024888.t1 | MTR_3g116060 | 26.693 | 251 | 154 | 8 | 257 | 485 | 473 | 715 | 2.27e-12 | 70.1 |
MS.gene024888.t1 | MTR_3g118530 | 32.903 | 155 | 102 | 2 | 108 | 261 | 71 | 224 | 1.73e-17 | 86.3 |
MS.gene024888.t1 | MTR_3g118530 | 32.903 | 155 | 102 | 2 | 108 | 261 | 71 | 224 | 1.98e-17 | 86.3 |
MS.gene024888.t1 | MTR_3g118530 | 25.397 | 252 | 156 | 9 | 257 | 485 | 483 | 725 | 2.28e-11 | 67.0 |
MS.gene024888.t1 | MTR_5g044910 | 29.444 | 180 | 121 | 3 | 84 | 260 | 47 | 223 | 2.25e-16 | 82.8 |
MS.gene024888.t1 | MTR_5g024740 | 26.337 | 243 | 152 | 7 | 22 | 260 | 4 | 223 | 1.98e-15 | 79.7 |
MS.gene024888.t1 | MTR_8g073100 | 26.446 | 242 | 154 | 7 | 84 | 304 | 47 | 285 | 5.80e-15 | 78.2 |
MS.gene024888.t1 | MTR_8g073100 | 28.926 | 242 | 142 | 8 | 263 | 485 | 473 | 703 | 1.97e-12 | 70.5 |
MS.gene024888.t1 | MTR_1g093115 | 50.794 | 63 | 30 | 1 | 161 | 222 | 1 | 63 | 4.45e-13 | 64.7 |
MS.gene024888.t1 | MTR_6g006260 | 34.959 | 123 | 69 | 4 | 239 | 352 | 32 | 152 | 4.65e-13 | 69.3 |
MS.gene024888.t1 | MTR_6g006260 | 34.959 | 123 | 69 | 4 | 239 | 352 | 33 | 153 | 8.89e-13 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024888.t1 | AT5G26340 | 81.921 | 531 | 90 | 3 | 1 | 530 | 1 | 526 | 0.0 | 896 |
MS.gene024888.t1 | AT4G02050 | 58.627 | 510 | 201 | 5 | 1 | 505 | 1 | 505 | 0.0 | 622 |
MS.gene024888.t1 | AT4G02050 | 58.627 | 510 | 201 | 5 | 1 | 505 | 1 | 505 | 0.0 | 622 |
MS.gene024888.t1 | AT1G11260 | 58.661 | 508 | 204 | 5 | 1 | 504 | 1 | 506 | 0.0 | 600 |
MS.gene024888.t1 | AT1G50310 | 58.642 | 486 | 196 | 5 | 18 | 501 | 21 | 503 | 0.0 | 594 |
MS.gene024888.t1 | AT5G26250 | 60.685 | 496 | 189 | 4 | 13 | 506 | 13 | 504 | 0.0 | 592 |
MS.gene024888.t1 | AT3G19940 | 57.320 | 485 | 203 | 4 | 18 | 501 | 21 | 502 | 0.0 | 585 |
MS.gene024888.t1 | AT5G23270 | 58.600 | 500 | 203 | 3 | 1 | 497 | 1 | 499 | 0.0 | 582 |
MS.gene024888.t1 | AT3G05960 | 59.719 | 499 | 195 | 4 | 14 | 510 | 13 | 507 | 0.0 | 581 |
MS.gene024888.t1 | AT1G77210 | 56.917 | 506 | 207 | 8 | 1 | 500 | 1 | 501 | 0.0 | 576 |
MS.gene024888.t1 | AT1G77210 | 56.917 | 506 | 207 | 8 | 1 | 500 | 1 | 501 | 0.0 | 576 |
MS.gene024888.t1 | AT4G21480 | 57.895 | 494 | 200 | 5 | 9 | 499 | 10 | 498 | 0.0 | 559 |
MS.gene024888.t1 | AT3G19930 | 53.033 | 511 | 235 | 4 | 1 | 509 | 1 | 508 | 0.0 | 554 |
MS.gene024888.t1 | AT3G19930 | 53.033 | 511 | 235 | 4 | 1 | 509 | 1 | 508 | 0.0 | 554 |
MS.gene024888.t1 | AT1G34580 | 48.915 | 507 | 246 | 7 | 1 | 499 | 1 | 502 | 1.88e-176 | 507 |
MS.gene024888.t1 | AT1G07340 | 52.333 | 493 | 230 | 3 | 9 | 500 | 10 | 498 | 1.41e-173 | 499 |
MS.gene024888.t1 | AT5G61520 | 48.089 | 497 | 246 | 7 | 16 | 506 | 18 | 508 | 5.42e-162 | 470 |
MS.gene024888.t1 | AT1G34580 | 47.702 | 457 | 228 | 6 | 49 | 499 | 1 | 452 | 8.26e-154 | 447 |
MS.gene024888.t1 | AT1G50310 | 57.102 | 352 | 147 | 4 | 152 | 501 | 11 | 360 | 2.59e-149 | 433 |
MS.gene024888.t1 | AT5G61520 | 46.882 | 465 | 235 | 7 | 48 | 506 | 2 | 460 | 2.75e-145 | 426 |
MS.gene024888.t1 | AT1G77210 | 58.000 | 350 | 143 | 4 | 152 | 500 | 6 | 352 | 2.63e-144 | 419 |
MS.gene024888.t1 | AT2G16120 | 30.040 | 506 | 303 | 10 | 26 | 507 | 30 | 508 | 1.68e-58 | 202 |
MS.gene024888.t1 | AT2G16130 | 30.083 | 482 | 287 | 9 | 26 | 483 | 30 | 485 | 4.27e-58 | 201 |
MS.gene024888.t1 | AT3G18830 | 27.863 | 524 | 332 | 8 | 26 | 529 | 40 | 537 | 9.40e-57 | 198 |
MS.gene024888.t1 | AT2G18480 | 30.361 | 471 | 282 | 11 | 36 | 485 | 36 | 481 | 9.43e-56 | 195 |
MS.gene024888.t1 | AT4G36670 | 30.739 | 501 | 286 | 14 | 12 | 483 | 7 | 475 | 2.29e-55 | 194 |
MS.gene024888.t1 | AT2G43330 | 29.387 | 473 | 302 | 10 | 26 | 491 | 35 | 482 | 2.77e-53 | 188 |
MS.gene024888.t1 | AT1G30220 | 32.075 | 371 | 220 | 8 | 20 | 381 | 26 | 373 | 3.19e-51 | 184 |
MS.gene024888.t1 | AT5G59250 | 32.101 | 514 | 295 | 15 | 3 | 489 | 72 | 558 | 4.73e-50 | 181 |
MS.gene024888.t1 | AT1G08930 | 30.608 | 477 | 287 | 11 | 13 | 483 | 49 | 487 | 2.36e-45 | 166 |
MS.gene024888.t1 | AT1G08930 | 30.608 | 477 | 287 | 11 | 13 | 483 | 49 | 487 | 2.36e-45 | 166 |
MS.gene024888.t1 | AT2G20780 | 26.427 | 473 | 305 | 10 | 23 | 483 | 55 | 496 | 3.21e-44 | 164 |
MS.gene024888.t1 | AT2G20780 | 27.670 | 412 | 277 | 7 | 83 | 483 | 37 | 438 | 1.08e-43 | 161 |
MS.gene024888.t1 | AT5G16150 | 27.368 | 475 | 307 | 10 | 12 | 483 | 99 | 538 | 4.63e-43 | 161 |
MS.gene024888.t1 | AT5G16150 | 27.368 | 475 | 307 | 10 | 12 | 483 | 99 | 538 | 4.63e-43 | 161 |
MS.gene024888.t1 | AT5G16150 | 27.368 | 475 | 307 | 10 | 12 | 483 | 99 | 538 | 4.63e-43 | 161 |
MS.gene024888.t1 | AT4G16480 | 33.051 | 354 | 198 | 8 | 19 | 359 | 24 | 351 | 4.94e-43 | 162 |
MS.gene024888.t1 | AT4G16480 | 33.051 | 354 | 198 | 8 | 19 | 359 | 24 | 351 | 4.94e-43 | 162 |
MS.gene024888.t1 | AT4G16480 | 33.051 | 354 | 198 | 8 | 19 | 359 | 24 | 351 | 4.94e-43 | 162 |
MS.gene024888.t1 | AT3G05400 | 27.484 | 473 | 303 | 9 | 15 | 483 | 19 | 455 | 7.16e-43 | 159 |
MS.gene024888.t1 | AT1G08890 | 29.707 | 478 | 294 | 11 | 15 | 487 | 20 | 460 | 9.74e-43 | 159 |
MS.gene024888.t1 | AT3G05165 | 26.526 | 475 | 305 | 8 | 15 | 483 | 23 | 459 | 1.20e-41 | 155 |
MS.gene024888.t1 | AT3G05165 | 26.526 | 475 | 305 | 8 | 15 | 483 | 23 | 459 | 1.20e-41 | 155 |
MS.gene024888.t1 | AT3G05165 | 26.526 | 475 | 305 | 8 | 15 | 483 | 23 | 459 | 1.20e-41 | 155 |
MS.gene024888.t1 | AT1G75220 | 29.149 | 470 | 297 | 10 | 19 | 483 | 44 | 482 | 1.45e-41 | 156 |
MS.gene024888.t1 | AT5G27350 | 27.984 | 486 | 302 | 11 | 13 | 490 | 22 | 467 | 2.01e-41 | 155 |
MS.gene024888.t1 | AT1G08900 | 29.925 | 401 | 266 | 6 | 85 | 483 | 25 | 412 | 1.59e-40 | 152 |
MS.gene024888.t1 | AT5G17010 | 28.571 | 483 | 297 | 17 | 23 | 486 | 48 | 501 | 1.77e-40 | 153 |
MS.gene024888.t1 | AT5G17010 | 28.571 | 483 | 297 | 17 | 23 | 486 | 48 | 501 | 1.77e-40 | 153 |
MS.gene024888.t1 | AT5G17010 | 28.571 | 483 | 297 | 17 | 23 | 486 | 48 | 501 | 1.77e-40 | 153 |
MS.gene024888.t1 | AT3G05155 | 27.215 | 474 | 307 | 10 | 15 | 486 | 20 | 457 | 1.85e-40 | 152 |
MS.gene024888.t1 | AT1G08900 | 29.925 | 401 | 266 | 6 | 85 | 483 | 67 | 454 | 3.98e-40 | 151 |
MS.gene024888.t1 | AT1G08900 | 29.925 | 401 | 266 | 6 | 85 | 483 | 67 | 454 | 3.98e-40 | 151 |
MS.gene024888.t1 | AT1G08900 | 29.925 | 401 | 266 | 6 | 85 | 483 | 59 | 446 | 4.38e-40 | 151 |
MS.gene024888.t1 | AT2G35740 | 29.223 | 373 | 233 | 8 | 20 | 382 | 24 | 375 | 5.17e-40 | 153 |
MS.gene024888.t1 | AT5G27360 | 26.250 | 480 | 318 | 8 | 13 | 490 | 26 | 471 | 1.60e-38 | 147 |
MS.gene024888.t1 | AT3G05160 | 26.050 | 476 | 306 | 9 | 15 | 483 | 14 | 450 | 1.67e-38 | 147 |
MS.gene024888.t1 | AT3G05150 | 28.425 | 489 | 309 | 13 | 11 | 492 | 24 | 478 | 2.32e-38 | 147 |
MS.gene024888.t1 | AT3G03090 | 28.333 | 480 | 288 | 17 | 30 | 486 | 55 | 501 | 3.38e-38 | 147 |
MS.gene024888.t1 | AT5G27360 | 26.250 | 480 | 318 | 8 | 13 | 490 | 74 | 519 | 5.21e-38 | 147 |
MS.gene024888.t1 | AT3G05150 | 28.361 | 476 | 304 | 12 | 11 | 483 | 24 | 465 | 6.55e-38 | 145 |
MS.gene024888.t1 | AT3G05150 | 28.361 | 476 | 304 | 12 | 11 | 483 | 24 | 465 | 6.55e-38 | 145 |
MS.gene024888.t1 | AT3G05160 | 27.586 | 406 | 269 | 7 | 85 | 483 | 14 | 401 | 1.06e-37 | 144 |
MS.gene024888.t1 | AT3G05160 | 27.586 | 406 | 269 | 7 | 85 | 483 | 14 | 401 | 1.06e-37 | 144 |
MS.gene024888.t1 | AT3G05400 | 30.108 | 372 | 234 | 8 | 123 | 483 | 79 | 435 | 4.38e-37 | 142 |
MS.gene024888.t1 | AT1G05030 | 26.898 | 461 | 300 | 12 | 28 | 483 | 85 | 513 | 6.07e-37 | 144 |
MS.gene024888.t1 | AT2G48020 | 25.806 | 403 | 284 | 5 | 83 | 483 | 68 | 457 | 2.09e-36 | 141 |
MS.gene024888.t1 | AT2G48020 | 25.806 | 403 | 284 | 5 | 83 | 483 | 68 | 457 | 2.09e-36 | 141 |
MS.gene024888.t1 | AT1G19450 | 27.601 | 471 | 303 | 10 | 19 | 483 | 45 | 483 | 2.23e-36 | 141 |
MS.gene024888.t1 | AT3G05165 | 27.078 | 421 | 262 | 9 | 15 | 428 | 23 | 405 | 3.48e-36 | 140 |
MS.gene024888.t1 | AT3G05165 | 27.078 | 421 | 262 | 9 | 15 | 428 | 23 | 405 | 3.48e-36 | 140 |
MS.gene024888.t1 | AT3G05165 | 27.078 | 421 | 262 | 9 | 15 | 428 | 23 | 405 | 3.70e-36 | 141 |
MS.gene024888.t1 | AT5G18840 | 28.125 | 416 | 273 | 7 | 83 | 490 | 84 | 481 | 4.07e-36 | 140 |
MS.gene024888.t1 | AT1G05030 | 27.317 | 410 | 281 | 9 | 79 | 483 | 64 | 461 | 5.23e-36 | 140 |
MS.gene024888.t1 | AT1G08920 | 26.850 | 473 | 306 | 10 | 15 | 483 | 25 | 461 | 7.67e-36 | 139 |
MS.gene024888.t1 | AT1G54730 | 27.475 | 404 | 276 | 7 | 83 | 483 | 72 | 461 | 4.04e-34 | 135 |
MS.gene024888.t1 | AT1G79820 | 26.667 | 405 | 277 | 7 | 84 | 483 | 97 | 486 | 1.74e-33 | 133 |
MS.gene024888.t1 | AT1G79820 | 26.667 | 405 | 277 | 7 | 84 | 483 | 97 | 486 | 1.74e-33 | 133 |
MS.gene024888.t1 | AT1G08920 | 26.458 | 480 | 306 | 11 | 15 | 483 | 25 | 468 | 1.77e-33 | 133 |
MS.gene024888.t1 | AT4G04750 | 27.559 | 381 | 259 | 6 | 107 | 483 | 144 | 511 | 2.05e-33 | 134 |
MS.gene024888.t1 | AT4G04760 | 28.325 | 406 | 273 | 7 | 83 | 483 | 12 | 404 | 2.11e-33 | 132 |
MS.gene024888.t1 | AT1G08900 | 29.167 | 360 | 240 | 6 | 85 | 442 | 67 | 413 | 2.84e-33 | 132 |
MS.gene024888.t1 | AT4G04750 | 27.720 | 386 | 252 | 6 | 107 | 483 | 100 | 467 | 3.13e-33 | 132 |
MS.gene024888.t1 | AT4G04750 | 27.720 | 386 | 252 | 6 | 107 | 483 | 100 | 467 | 3.13e-33 | 132 |
MS.gene024888.t1 | AT4G04760 | 28.325 | 406 | 273 | 7 | 83 | 483 | 71 | 463 | 4.13e-33 | 132 |
MS.gene024888.t1 | AT1G08920 | 26.606 | 436 | 280 | 10 | 15 | 446 | 25 | 424 | 2.20e-32 | 129 |
MS.gene024888.t1 | AT5G27360 | 26.849 | 365 | 252 | 6 | 128 | 490 | 16 | 367 | 3.15e-32 | 127 |
MS.gene024888.t1 | AT5G27360 | 26.849 | 365 | 252 | 6 | 128 | 490 | 16 | 367 | 3.15e-32 | 127 |
MS.gene024888.t1 | AT1G67300 | 24.619 | 394 | 284 | 6 | 93 | 483 | 103 | 486 | 3.68e-31 | 127 |
MS.gene024888.t1 | AT1G67300 | 24.810 | 395 | 281 | 7 | 93 | 483 | 103 | 485 | 1.20e-30 | 125 |
MS.gene024888.t1 | AT1G67300 | 24.810 | 395 | 281 | 7 | 93 | 483 | 103 | 485 | 1.20e-30 | 125 |
MS.gene024888.t1 | AT1G54730 | 25.414 | 362 | 255 | 5 | 83 | 442 | 72 | 420 | 3.06e-30 | 123 |
MS.gene024888.t1 | AT1G67300 | 24.370 | 357 | 253 | 7 | 93 | 446 | 103 | 445 | 4.20e-30 | 123 |
MS.gene024888.t1 | AT1G67300 | 24.370 | 357 | 253 | 7 | 93 | 446 | 103 | 445 | 4.20e-30 | 123 |
MS.gene024888.t1 | AT1G79820 | 26.074 | 349 | 245 | 5 | 84 | 431 | 97 | 433 | 5.42e-30 | 122 |
MS.gene024888.t1 | AT1G67300 | 25.000 | 332 | 234 | 6 | 93 | 421 | 103 | 422 | 2.01e-29 | 120 |
MS.gene024888.t1 | AT1G67300 | 25.000 | 332 | 234 | 6 | 93 | 421 | 103 | 422 | 2.01e-29 | 120 |
MS.gene024888.t1 | AT5G27360 | 26.098 | 410 | 267 | 8 | 13 | 420 | 26 | 401 | 2.07e-29 | 120 |
MS.gene024888.t1 | AT4G04760 | 26.847 | 406 | 276 | 7 | 83 | 483 | 71 | 460 | 1.02e-27 | 116 |
MS.gene024888.t1 | AT1G54730 | 26.303 | 403 | 261 | 9 | 83 | 483 | 72 | 440 | 1.12e-27 | 116 |
MS.gene024888.t1 | AT3G05155 | 27.219 | 338 | 212 | 8 | 16 | 352 | 21 | 325 | 9.12e-27 | 111 |
MS.gene024888.t1 | AT3G20460 | 25.662 | 491 | 309 | 16 | 5 | 483 | 36 | 482 | 1.65e-25 | 110 |
MS.gene024888.t1 | AT1G54730 | 26.901 | 342 | 233 | 7 | 83 | 421 | 72 | 399 | 2.48e-25 | 108 |
MS.gene024888.t1 | AT1G54730 | 26.901 | 342 | 233 | 7 | 83 | 421 | 72 | 399 | 2.48e-25 | 108 |
MS.gene024888.t1 | AT1G54730 | 28.413 | 271 | 182 | 4 | 84 | 352 | 73 | 333 | 1.35e-24 | 105 |
MS.gene024888.t1 | AT2G48020 | 27.425 | 299 | 205 | 4 | 83 | 379 | 68 | 356 | 3.17e-24 | 105 |
MS.gene024888.t1 | AT1G54730 | 25.414 | 362 | 234 | 9 | 83 | 442 | 72 | 399 | 8.26e-24 | 104 |
MS.gene024888.t1 | AT2G48020 | 28.676 | 272 | 182 | 4 | 83 | 352 | 68 | 329 | 2.15e-22 | 99.4 |
MS.gene024888.t1 | AT1G54730 | 27.236 | 246 | 170 | 3 | 84 | 327 | 73 | 311 | 1.27e-21 | 96.3 |
MS.gene024888.t1 | AT1G54730 | 27.236 | 246 | 170 | 3 | 84 | 327 | 73 | 311 | 1.27e-21 | 96.3 |
MS.gene024888.t1 | AT1G54730 | 27.236 | 246 | 170 | 3 | 83 | 326 | 72 | 310 | 4.73e-21 | 95.9 |
MS.gene024888.t1 | AT1G79820 | 23.951 | 405 | 240 | 8 | 84 | 483 | 97 | 438 | 3.42e-20 | 93.6 |
MS.gene024888.t1 | AT5G17010 | 24.948 | 481 | 257 | 18 | 23 | 486 | 45 | 438 | 1.01e-19 | 92.4 |
MS.gene024888.t1 | AT3G51490 | 27.016 | 248 | 158 | 7 | 22 | 267 | 4 | 230 | 6.68e-18 | 87.8 |
MS.gene024888.t1 | AT3G51490 | 27.016 | 248 | 158 | 7 | 22 | 267 | 4 | 230 | 7.36e-18 | 87.4 |
MS.gene024888.t1 | AT3G51490 | 26.230 | 244 | 151 | 6 | 260 | 485 | 486 | 718 | 4.20e-14 | 75.9 |
MS.gene024888.t1 | AT3G51490 | 29.508 | 183 | 126 | 3 | 88 | 269 | 2 | 182 | 1.27e-17 | 86.7 |
MS.gene024888.t1 | AT3G51490 | 26.230 | 244 | 151 | 6 | 260 | 485 | 436 | 668 | 3.97e-14 | 75.9 |
MS.gene024888.t1 | AT1G79820 | 24.110 | 365 | 203 | 8 | 127 | 483 | 78 | 376 | 4.62e-17 | 83.6 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.51e-16 | 82.4 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.51e-16 | 82.4 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.51e-16 | 82.4 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT4G35300 | 31.481 | 162 | 109 | 2 | 107 | 267 | 70 | 230 | 3.91e-16 | 82.0 |
MS.gene024888.t1 | AT1G20840 | 31.500 | 200 | 126 | 5 | 77 | 267 | 31 | 228 | 6.25e-16 | 81.6 |
MS.gene024888.t1 | AT1G20840 | 31.500 | 200 | 126 | 5 | 77 | 267 | 31 | 228 | 6.25e-16 | 81.6 |
Find 130 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTATGATGTTGGTGTTTC+AGG | 0.159582 | 5.3:-1326826 | MS.gene024888:intron |
CTCTATTCAGCTGTGATTAC+TGG | 0.172982 | 5.3:-1323025 | MS.gene024888:CDS |
CGTCATAATTTCATGTATTA+TGG | 0.203173 | 5.3:-1326872 | MS.gene024888:CDS |
TTTGCTAACCTTGTCAATTA+TGG | 0.208906 | 5.3:-1324207 | MS.gene024888:CDS |
GTCTGCCTTCGCTTGGTCTT+GGG | 0.222884 | 5.3:-1322798 | MS.gene024888:CDS |
TTGTGATCATGCAGAATTTC+AGG | 0.239240 | 5.3:-1323568 | MS.gene024888:intron |
CTCTCTGTCATTTCTTCAAT+TGG | 0.240872 | 5.3:+1322551 | None:intergenic |
AAGAAATGACAGAGAGAGTA+TGG | 0.268699 | 5.3:-1322544 | MS.gene024888:CDS |
CAACATTGAACCCGAGTTCT+TGG | 0.276589 | 5.3:-1323389 | MS.gene024888:CDS |
TGTCTGCCTTCGCTTGGTCT+TGG | 0.278420 | 5.3:-1322799 | MS.gene024888:CDS |
TCTTCTTGTTCTTCTCTGGC+TGG | 0.298249 | 5.3:-1322628 | MS.gene024888:CDS |
GGAATCTTCTTGTTCTTCTC+TGG | 0.310304 | 5.3:-1322632 | MS.gene024888:CDS |
ATGTTATGCAACTTCAAGTT+TGG | 0.312039 | 5.3:-1322653 | MS.gene024888:CDS |
CGTTTGAGAAGATTCCTAAA+AGG | 0.325463 | 5.3:+1323325 | None:intergenic |
GTCGTGATAGCAATCATTCT+TGG | 0.343617 | 5.3:-1322899 | MS.gene024888:CDS |
TCCTATACAACTCGTACATT+GGG | 0.361220 | 5.3:-1325527 | MS.gene024888:CDS |
TTGGAGACTATCTCTTGGTT+TGG | 0.361405 | 5.3:-1323536 | MS.gene024888:CDS |
TTGGTTCTGGAAGAGGTTTA+TGG | 0.367480 | 5.3:-1322513 | MS.gene024888:CDS |
AGAATTTACAACTGGGAATT+CGG | 0.368074 | 5.3:+1322410 | None:intergenic |
GAGGCTTCGCCACGAGTGGC+GGG | 0.369010 | 5.3:-1326924 | MS.gene024888:CDS |
GAATTCCAAGAATTTACAAC+TGG | 0.377660 | 5.3:+1322402 | None:intergenic |
TATGGAAGCAACATTGGTTC+TGG | 0.378484 | 5.3:-1322526 | MS.gene024888:CDS |
AGACTCACCATGTTGATTGC+TGG | 0.383024 | 5.3:-1325500 | MS.gene024888:CDS |
AGTTAATGCAGCTAGGTATA+AGG | 0.385835 | 5.3:+1325565 | None:intergenic |
CTTTCGTGTCTGCCTTCGCT+TGG | 0.391512 | 5.3:-1322805 | MS.gene024888:CDS |
CCTCGCTCAATGAGACTGTT+GGG | 0.394071 | 5.3:+1323460 | None:intergenic |
CTTCTTGTTCTTCTCTGGCT+GGG | 0.396680 | 5.3:-1322627 | MS.gene024888:CDS |
GTTCACCTTTGTCATTGCTC+AGG | 0.398780 | 5.3:-1322687 | MS.gene024888:CDS |
CCATGAGTGCACCCACTGTT+AGG | 0.399601 | 5.3:+1323494 | None:intergenic |
AACCTTGCCATGCTCATTGT+TGG | 0.400156 | 5.3:-1325434 | MS.gene024888:CDS |
ATACAGAAAGACAGTGTTAG+AGG | 0.400944 | 5.3:-1325648 | MS.gene024888:CDS |
GCAATTTCTGAGAGGAAAAC+TGG | 0.403356 | 5.3:+1324294 | None:intergenic |
ATCTTACTTGGTTGTGGTGT+TGG | 0.408209 | 5.3:-1325407 | MS.gene024888:CDS |
AGACTATCTCTTGGTTTGGC+TGG | 0.409374 | 5.3:-1323532 | MS.gene024888:CDS |
GGCGAAGCCTCCGCCGGCCA+TGG | 0.416696 | 5.3:+1326936 | None:intergenic |
GGAGCTTTGCGAGGCAAGTC+GGG | 0.417585 | 5.3:-1323368 | MS.gene024888:CDS |
CCTAACAGTGGGTGCACTCA+TGG | 0.419887 | 5.3:-1323494 | MS.gene024888:CDS |
ATCCTATACAACTCGTACAT+TGG | 0.422729 | 5.3:-1325528 | MS.gene024888:CDS |
ATTGGTATGTTCTTCGTCTC+GGG | 0.424874 | 5.3:+1322569 | None:intergenic |
AATTGGTATGTTCTTCGTCT+CGG | 0.425080 | 5.3:+1322568 | None:intergenic |
AGCAACATTGGTTCTGGAAG+AGG | 0.429089 | 5.3:-1322520 | MS.gene024888:CDS |
CGTTGATGCCGGTGAATTGT+TGG | 0.432613 | 5.3:+1323107 | None:intergenic |
CCCCAATGTACGAGTTGTAT+AGG | 0.437683 | 5.3:+1325526 | None:intergenic |
ACTGTCTTTCTGTATACTGC+TGG | 0.441904 | 5.3:+1325656 | None:intergenic |
GGAGGCTTCGCCACGAGTGG+CGG | 0.447870 | 5.3:-1326925 | MS.gene024888:CDS |
GGCAGAATCTTACTTGGTTG+TGG | 0.448889 | 5.3:-1325413 | MS.gene024888:CDS |
TGGGGTTGGAGACTATCTCT+TGG | 0.452302 | 5.3:-1323541 | MS.gene024888:CDS |
ACCTCGCTCAATGAGACTGT+TGG | 0.455453 | 5.3:+1323459 | None:intergenic |
AAAGCTCCACGAATTCTTGA+AGG | 0.464569 | 5.3:+1324270 | None:intergenic |
CCCACTGTTAGGAGAAGTGC+TGG | 0.467123 | 5.3:+1323505 | None:intergenic |
GGTCTTGGGGTCCTCTCGGT+TGG | 0.470775 | 5.3:-1322784 | MS.gene024888:CDS |
ATTGTTGGCAGAATCTTACT+TGG | 0.471393 | 5.3:-1325419 | MS.gene024888:CDS |
CTTATGTTCGGTTATGATGT+TGG | 0.471516 | 5.3:-1326835 | MS.gene024888:CDS |
CAGTAATCACAGCTGAATAG+AGG | 0.471861 | 5.3:+1323026 | None:intergenic |
CTCGCAAAGCTCCAAGAACT+CGG | 0.472811 | 5.3:+1323378 | None:intergenic |
TGGAGCTTTGCGAGGCAAGT+CGG | 0.474040 | 5.3:-1323369 | MS.gene024888:CDS |
TCCAGCTCAATGTCACCATT+GGG | 0.476689 | 5.3:-1324236 | MS.gene024888:CDS |
TTCCAGCTCAATGTCACCAT+TGG | 0.476773 | 5.3:-1324237 | MS.gene024888:CDS |
AGCAATCATTCTTGGGATCA+AGG | 0.479075 | 5.3:-1322891 | MS.gene024888:CDS |
TGAAAGATCGTCGGAATGAT+CGG | 0.481000 | 5.3:+1322865 | None:intergenic |
CATGCAGAATTTCAGGTGGA+TGG | 0.482057 | 5.3:-1323561 | MS.gene024888:intron |
TCTGCCTTCGCTTGGTCTTG+GGG | 0.483271 | 5.3:-1322797 | MS.gene024888:CDS |
GAATTTCAGGTGGATGGGGT+TGG | 0.483636 | 5.3:-1323555 | MS.gene024888:CDS |
AAACATGATCGCGTTGATGC+CGG | 0.485208 | 5.3:+1323096 | None:intergenic |
GTTTGAGAAGATTCCTAAAA+GGG | 0.487028 | 5.3:+1323326 | None:intergenic |
TCGTGATAGCAATCATTCTT+GGG | 0.491265 | 5.3:-1322898 | MS.gene024888:CDS |
GCTTGGTCTTGGGGTCCTCT+CGG | 0.491457 | 5.3:-1322788 | MS.gene024888:CDS |
GGCTTCGCCACGAGTGGCGG+GGG | 0.492080 | 5.3:-1326922 | MS.gene024888:CDS |
GGCAAGTCGGGTTGCTAAAG+AGG | 0.493242 | 5.3:-1323356 | MS.gene024888:CDS |
GCTACCGGTGGTCTTATGTT+CGG | 0.496699 | 5.3:-1326847 | MS.gene024888:CDS |
TACTGCAAATATGATAATCA+AGG | 0.498116 | 5.3:-1325608 | MS.gene024888:CDS |
ATGCAGAATTTCAGGTGGAT+GGG | 0.500388 | 5.3:-1323560 | MS.gene024888:intron |
CATTCCGACGATCTTTCAAA+AGG | 0.506626 | 5.3:-1322860 | MS.gene024888:CDS |
CCACTCGAGACTCGATCAGC+TGG | 0.513496 | 5.3:-1322740 | MS.gene024888:CDS |
TGCAGAATTTCAGGTGGATG+GGG | 0.517632 | 5.3:-1323559 | MS.gene024888:intron |
TCCCAATGGTGACATTGAGC+TGG | 0.520153 | 5.3:+1324235 | None:intergenic |
GAGCGAGGTCGCCTTGAAGA+AGG | 0.521285 | 5.3:-1323445 | MS.gene024888:CDS |
AGAAAGACAGTGTTAGAGGC+AGG | 0.525310 | 5.3:-1325644 | MS.gene024888:CDS |
TACTTGTAATGCGATGGAAA+TGG | 0.527060 | 5.3:+1323282 | None:intergenic |
TCATGTATTATGGCTGCTAC+CGG | 0.531696 | 5.3:-1326862 | MS.gene024888:CDS |
CTCGCTCAATGAGACTGTTG+GGG | 0.532113 | 5.3:+1323461 | None:intergenic |
ACTCGTGGCGAAGCCTCCGC+CGG | 0.537860 | 5.3:+1326930 | None:intergenic |
AGGCTTCGCCACGAGTGGCG+GGG | 0.539960 | 5.3:-1326923 | MS.gene024888:CDS |
TAACAAACCATGGCCGGCGG+AGG | 0.542312 | 5.3:-1326943 | None:intergenic |
GGCGGAGGCTTCGCCACGAG+TGG | 0.543900 | 5.3:-1326928 | MS.gene024888:CDS |
AGAGAGTATGGAAGCAACAT+TGG | 0.551108 | 5.3:-1322532 | MS.gene024888:CDS |
TCGAGTGGAAATGTCTCACT+TGG | 0.551130 | 5.3:+1322755 | None:intergenic |
ATCTACTCAGTCGATAAACT+TGG | 0.551896 | 5.3:-1322971 | MS.gene024888:CDS |
CGAGTTCTTGGAGCTTTGCG+AGG | 0.553860 | 5.3:-1323377 | MS.gene024888:CDS |
CGTATGTTGCTGTTGGAAGC+CGG | 0.555363 | 5.3:-1322944 | MS.gene024888:CDS |
TGGTCGTCGTATGTTGCTGT+TGG | 0.558566 | 5.3:-1322951 | MS.gene024888:CDS |
ATTGCACCTTCAAGAATTCG+TGG | 0.560498 | 5.3:-1324276 | MS.gene024888:CDS |
AGTACTTACTTGTAATGCGA+TGG | 0.565746 | 5.3:+1323276 | None:intergenic |
CCTAGCTAACAAACCATGGC+CGG | 0.567190 | 5.3:-1326949 | None:intergenic |
GAACTCGGGTTCAATGTTGT+CGG | 0.567292 | 5.3:+1323393 | None:intergenic |
CCAGTGTTGTTCAATACAGT+GGG | 0.572265 | 5.3:-1323067 | MS.gene024888:CDS |
CTGTCTTTCTGTATACTGCT+GGG | 0.578586 | 5.3:+1325657 | None:intergenic |
AGTAATCACAGCTGAATAGA+GGG | 0.588357 | 5.3:+1323027 | None:intergenic |
ATACATGAAATTATGACGAT+CGG | 0.588772 | 5.3:+1326877 | None:intergenic |
AGTGGGTGCACTCATGGTTG+TGG | 0.597960 | 5.3:-1323488 | MS.gene024888:CDS |
TGCCAACAATGAGCATGGCA+AGG | 0.598518 | 5.3:+1325432 | None:intergenic |
TCGCAAAGCTCCAAGAACTC+GGG | 0.603242 | 5.3:+1323379 | None:intergenic |
TGTATTATGGCTGCTACCGG+TGG | 0.607194 | 5.3:-1326859 | MS.gene024888:CDS |
CAGGTATTCCAACAATTCAC+CGG | 0.608134 | 5.3:-1323115 | MS.gene024888:CDS |
AGACAAGAACATTTGTACAC+CGG | 0.613737 | 5.3:+1322925 | None:intergenic |
CCAGCTGATCGAGTCTCGAG+TGG | 0.616370 | 5.3:+1322740 | None:intergenic |
CCCACTGTATTGAACAACAC+TGG | 0.617307 | 5.3:+1323067 | None:intergenic |
ACCAGTGTTGTTCAATACAG+TGG | 0.620613 | 5.3:-1323068 | MS.gene024888:CDS |
TGTTAGTGCCATAATTGACA+AGG | 0.626375 | 5.3:+1324199 | None:intergenic |
GATTCTGCCAACAATGAGCA+TGG | 0.628326 | 5.3:+1325427 | None:intergenic |
CCAGCACTTCTCCTAACAGT+GGG | 0.629032 | 5.3:-1323505 | MS.gene024888:CDS |
AGGACCCCAAGACCAAGCGA+AGG | 0.640865 | 5.3:+1322793 | None:intergenic |
TTGAAGGTGCAATTTCTGAG+AGG | 0.640916 | 5.3:+1324286 | None:intergenic |
TGGAAATGGTAAGTTGAGGT+CGG | 0.643846 | 5.3:+1323296 | None:intergenic |
CCCAGCACTTCTCCTAACAG+TGG | 0.646885 | 5.3:-1323506 | MS.gene024888:CDS |
TGATCATGCAGAATTTCAGG+TGG | 0.654493 | 5.3:-1323565 | MS.gene024888:intron |
CCTATACAACTCGTACATTG+GGG | 0.657216 | 5.3:-1325526 | MS.gene024888:CDS |
GTTAGCAAACAAAATCCCAA+TGG | 0.659156 | 5.3:+1324221 | None:intergenic |
AGCTAACAAACCATGGCCGG+CGG | 0.659283 | 5.3:-1326946 | None:intergenic |
AAAAGCCTGAGCAATGACAA+AGG | 0.659672 | 5.3:+1322682 | None:intergenic |
GCGATGGAAATGGTAAGTTG+AGG | 0.663464 | 5.3:+1323292 | None:intergenic |
CCCAACAGTCTCATTGAGCG+AGG | 0.665093 | 5.3:-1323460 | MS.gene024888:CDS |
AATTCCAAGAATTTACAACT+GGG | 0.665521 | 5.3:+1322403 | None:intergenic |
AAGTTGAAGTTAATGCAGCT+AGG | 0.666109 | 5.3:+1325558 | None:intergenic |
TGAGTAGATAGACACAATTG+TGG | 0.671515 | 5.3:+1322985 | None:intergenic |
AGATAGACACAATTGTGGAG+AGG | 0.673901 | 5.3:+1322990 | None:intergenic |
TCGCTCAATGAGACTGTTGG+GGG | 0.680548 | 5.3:+1323462 | None:intergenic |
ATAACCGAACATAAGACCAC+CGG | 0.680970 | 5.3:+1326843 | None:intergenic |
CCACTGTTAGGAGAAGTGCT+GGG | 0.708624 | 5.3:+1323506 | None:intergenic |
CTTGGAATAAGCCAACCGAG+AGG | 0.779255 | 5.3:+1322773 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATAATAATAATAA+TGG | - | chr5.3:1326909-1326928 | MS.gene024888:CDS | 0.0% |
!! | AAATAATATAAAATACATGT+AGG | + | chr5.3:1322663-1322682 | None:intergenic | 10.0% |
!! | AGATAAAACATTATATTTAA+TGG | - | chr5.3:1323200-1323219 | MS.gene024888:intron | 10.0% |
!!! | AAATATAATGTTTTATCTTT+TGG | + | chr5.3:1323198-1323217 | None:intergenic | 10.0% |
!!! | ATATAAAATCAACAAAATTT+TGG | - | chr5.3:1325323-1325342 | MS.gene024888:intron | 10.0% |
!!! | GATATTTTATAAAAGATAAA+GGG | - | chr5.3:1323094-1323113 | MS.gene024888:CDS | 10.0% |
!!! | TGATATTTTATAAAAGATAA+AGG | - | chr5.3:1323093-1323112 | MS.gene024888:CDS | 10.0% |
!!! | TGATTGTAATTAATTTATTT+TGG | - | chr5.3:1323565-1323584 | MS.gene024888:intron | 10.0% |
!!! | TTATTATTATTTTTGATCTT+AGG | + | chr5.3:1326903-1326922 | None:intergenic | 10.0% |
!! | AAAAGTTGAATGTATTTATT+TGG | - | chr5.3:1322865-1322884 | MS.gene024888:CDS | 15.0% |
!! | GTAAATTAAGAATAAATTCA+GGG | + | chr5.3:1323151-1323170 | None:intergenic | 15.0% |
!! | TAAATTAAGAATAAATTCAG+GGG | + | chr5.3:1323150-1323169 | None:intergenic | 15.0% |
!! | TATGAAAAGAATCAAAATTA+AGG | + | chr5.3:1324839-1324858 | None:intergenic | 15.0% |
!! | TGTAAATTAAGAATAAATTC+AGG | + | chr5.3:1323152-1323171 | None:intergenic | 15.0% |
!!! | AAAAAATATGTTACTTTCAA+GGG | + | chr5.3:1325540-1325559 | None:intergenic | 15.0% |
!!! | ATAAAATCAATCAAGAATTT+TGG | - | chr5.3:1325633-1325652 | MS.gene024888:CDS | 15.0% |
!!! | ATTATTTTTAGTTTGAACTT+AGG | - | chr5.3:1324470-1324489 | MS.gene024888:intron | 15.0% |
!!! | ATTTTTGGTTAATTTATCAT+AGG | - | chr5.3:1325027-1325046 | MS.gene024888:intron | 15.0% |
!!! | CATATAAACATATTTTATTG+TGG | - | chr5.3:1324419-1324438 | MS.gene024888:intron | 15.0% |
!!! | GACTTTTAGTTATTAATTTA+TGG | + | chr5.3:1325352-1325371 | None:intergenic | 15.0% |
!!! | GTATCTTACTAAATTATTTT+TGG | - | chr5.3:1325012-1325031 | MS.gene024888:intron | 15.0% |
!!! | GTTACTTGATAATTTTATTT+TGG | - | chr5.3:1325669-1325688 | MS.gene024888:CDS | 15.0% |
!!! | TAAAAAATATGTTACTTTCA+AGG | + | chr5.3:1325541-1325560 | None:intergenic | 15.0% |
!!! | TTAGTTGTAATTTGTAAATT+GGG | - | chr5.3:1323005-1323024 | MS.gene024888:CDS | 15.0% |
!! | AAAAAACTTATATTGTGTAG+AGG | + | chr5.3:1322593-1322612 | None:intergenic | 20.0% |
!! | AAAAAATAGAATTTGTGAAG+TGG | + | chr5.3:1324782-1324801 | None:intergenic | 20.0% |
!! | AAAAACATAGAACAAAATAG+AGG | + | chr5.3:1324599-1324618 | None:intergenic | 20.0% |
!! | TAGTAAGCAAATTGAATTAA+TGG | - | chr5.3:1325261-1325280 | MS.gene024888:intron | 20.0% |
!! | TATACTTTGATTATATACGT+CGG | + | chr5.3:1324370-1324389 | None:intergenic | 20.0% |
!! | TCAAAACTCATTTCAAAATT+TGG | + | chr5.3:1324693-1324712 | None:intergenic | 20.0% |
!!! | AGGTGTATCAATTTTATTTT+TGG | - | chr5.3:1324985-1325004 | MS.gene024888:intron | 20.0% |
!!! | GTTAGTTGTAATTTGTAAAT+TGG | - | chr5.3:1323004-1323023 | MS.gene024888:CDS | 20.0% |
!!! | TGCAATTTTTGTTGTTATAT+TGG | - | chr5.3:1326515-1326534 | MS.gene024888:intron | 20.0% |
!!! | TTATTATCAATCAAAGTATC+TGG | + | chr5.3:1325610-1325629 | None:intergenic | 20.0% |
! | AAAACAAAGTGAATTTGGTT+TGG | + | chr5.3:1323497-1323516 | None:intergenic | 25.0% |
! | AAAACGGTTCAATATATTGT+TGG | - | chr5.3:1323294-1323313 | MS.gene024888:CDS | 25.0% |
! | AATTAGTAGTTGAGAGATTT+AGG | + | chr5.3:1323399-1323418 | None:intergenic | 25.0% |
! | AATTGAGTTCTCATTCTAAA+TGG | + | chr5.3:1324658-1324677 | None:intergenic | 25.0% |
! | ATACATGAAATTATGACGAT+CGG | + | chr5.3:1322475-1322494 | None:intergenic | 25.0% |
! | ATCCAAAAAAACCAAACTTA+AGG | - | chr5.3:1323427-1323446 | MS.gene024888:CDS | 25.0% |
! | ATTAGTAGTTGAGAGATTTA+GGG | + | chr5.3:1323398-1323417 | None:intergenic | 25.0% |
! | CATTATATTTAATGGTTGAG+TGG | - | chr5.3:1323208-1323227 | MS.gene024888:intron | 25.0% |
! | CGTCATAATTTCATGTATTA+TGG | - | chr5.3:1322477-1322496 | MS.gene024888:CDS | 25.0% |
! | GACATTAGTGTCTAATTATA+AGG | - | chr5.3:1324965-1324984 | MS.gene024888:intron | 25.0% |
! | GGACTCAAAATAAAAATACA+TGG | + | chr5.3:1324520-1324539 | None:intergenic | 25.0% |
! | TACTGCAAATATGATAATCA+AGG | - | chr5.3:1323741-1323760 | MS.gene024888:intron | 25.0% |
! | TATAAAATACATGTAGGTGA+TGG | + | chr5.3:1322657-1322676 | None:intergenic | 25.0% |
! | TCATTTGTTTGTTCAAAAAC+AGG | - | chr5.3:1326215-1326234 | MS.gene024888:intron | 25.0% |
! | TCCAAAAAAACCAAACTTAA+GGG | - | chr5.3:1323428-1323447 | MS.gene024888:CDS | 25.0% |
!! | CTATATCTAACATTTTTGAC+CGG | + | chr5.3:1325300-1325319 | None:intergenic | 25.0% |
!!! | AAACCAAATTCACTTTGTTT+TGG | - | chr5.3:1323496-1323515 | MS.gene024888:CDS | 25.0% |
!!! | ATATATTGAACCGTTTTTCT+CGG | + | chr5.3:1323291-1323310 | None:intergenic | 25.0% |
!!! | TCCATTTTTTTAGTCTACAA+GGG | - | chr5.3:1325431-1325450 | MS.gene024888:CDS | 25.0% |
!!! | TTATTTTGTACCGAGAAAAA+CGG | - | chr5.3:1323278-1323297 | MS.gene024888:intron | 25.0% |
AAAATAGAGGTCTACATCAA+TGG | + | chr5.3:1324586-1324605 | None:intergenic | 30.0% | |
AAAATGGATGATAAGGACTT+TGG | + | chr5.3:1324546-1324565 | None:intergenic | 30.0% | |
AAATCAGCTTCATTAGGAAT+TGG | - | chr5.3:1323054-1323073 | MS.gene024888:CDS | 30.0% | |
AACTTATATTGTGTAGAGGA+AGG | + | chr5.3:1322589-1322608 | None:intergenic | 30.0% | |
AAGCCAAAACAAAGTGAATT+TGG | + | chr5.3:1323502-1323521 | None:intergenic | 30.0% | |
AATAAATTCAGGGGTGATTT+GGG | + | chr5.3:1323141-1323160 | None:intergenic | 30.0% | |
ACACAGTTGAAGAAAAAAAG+AGG | + | chr5.3:1325202-1325221 | None:intergenic | 30.0% | |
ACCCTTGTAGACTAAAAAAA+TGG | + | chr5.3:1325435-1325454 | None:intergenic | 30.0% | |
CTCAAAAATACCCTTAAGTT+TGG | + | chr5.3:1323441-1323460 | None:intergenic | 30.0% | |
CTTCAACAAATATCTACAAG+AGG | + | chr5.3:1325570-1325589 | None:intergenic | 30.0% | |
GAAAACAAATCAGCTTCATT+AGG | - | chr5.3:1323048-1323067 | MS.gene024888:CDS | 30.0% | |
GGAAAAACTTCTTCAGAAAT+GGG | + | chr5.3:1323674-1323693 | None:intergenic | 30.0% | |
GGAATCATATCACAGAAATT+TGG | - | chr5.3:1323026-1323045 | MS.gene024888:CDS | 30.0% | |
GTTTGAGAAGATTCCTAAAA+GGG | + | chr5.3:1326026-1326045 | None:intergenic | 30.0% | |
TACAGCACATATTGAAAAGA+TGG | + | chr5.3:1322745-1322764 | None:intergenic | 30.0% | |
TTAAACAAAGAGTTCTGCAT+TGG | - | chr5.3:1324738-1324757 | MS.gene024888:intron | 30.0% | |
TTGAATTAATGGTTAGTGTG+TGG | - | chr5.3:1325272-1325291 | MS.gene024888:intron | 30.0% | |
TTGATTCATCTATACTGTTG+AGG | - | chr5.3:1322982-1323001 | MS.gene024888:CDS | 30.0% | |
TTGCGTTGAAACAATAACTA+GGG | + | chr5.3:1322634-1322653 | None:intergenic | 30.0% | |
TTGGAGAAAAATGGATGATA+AGG | + | chr5.3:1324553-1324572 | None:intergenic | 30.0% | |
TTTGCTAACCTTGTCAATTA+TGG | - | chr5.3:1325142-1325161 | MS.gene024888:intron | 30.0% | |
! | ATGTTATGCAACTTCAAGTT+TGG | - | chr5.3:1326696-1326715 | MS.gene024888:intron | 30.0% |
! | CTCTTGTAGATATTTGTTGA+AGG | - | chr5.3:1325568-1325587 | MS.gene024888:CDS | 30.0% |
! | TTATAATCCATGTGATGATG+TGG | - | chr5.3:1323241-1323260 | MS.gene024888:intron | 30.0% |
!! | CCAAAAGTATTGGAGAAAAA+TGG | + | chr5.3:1324562-1324581 | None:intergenic | 30.0% |
!! | CCATTTTTCTCCAATACTTT+TGG | - | chr5.3:1324559-1324578 | MS.gene024888:intron | 30.0% |
!!! | ACCCTTAAGTTTGGTTTTTT+TGG | + | chr5.3:1323432-1323451 | None:intergenic | 30.0% |
!!! | ATTGCTGGTTTTTTCTTCAT+TGG | - | chr5.3:1323864-1323883 | MS.gene024888:intron | 30.0% |
!!! | GGTATCTTTTTCGATGATTT+TGG | + | chr5.3:1322720-1322739 | None:intergenic | 30.0% |
!!! | GTCCATTTTTTTAGTCTACA+AGG | - | chr5.3:1325430-1325449 | MS.gene024888:CDS | 30.0% |
AAGAAATGACAGAGAGAGTA+TGG | - | chr5.3:1326805-1326824 | MS.gene024888:intron | 35.0% | |
AAGTTGAAGTTAATGCAGCT+AGG | + | chr5.3:1323794-1323813 | None:intergenic | 35.0% | |
AATTACACGTACGTACATAG+TGG | - | chr5.3:1324891-1324910 | MS.gene024888:intron | 35.0% | |
AATTGGTATGTTCTTCGTCT+CGG | + | chr5.3:1326784-1326803 | None:intergenic | 35.0% | |
ACAAATATCTACAAGAGGTG+TGG | + | chr5.3:1325565-1325584 | None:intergenic | 35.0% | |
ACACATATAGTAACGTAACG+TGG | - | chr5.3:1324858-1324877 | MS.gene024888:intron | 35.0% | |
ACGGTTCAATATATTGTTGG+TGG | - | chr5.3:1323297-1323316 | MS.gene024888:CDS | 35.0% | |
AGACAAGAACATTTGTACAC+CGG | + | chr5.3:1326427-1326446 | None:intergenic | 35.0% | |
AGCACATATTGAAAAGATGG+AGG | + | chr5.3:1322742-1322761 | None:intergenic | 35.0% | |
AGTAATCACAGCTGAATAGA+GGG | + | chr5.3:1326325-1326344 | None:intergenic | 35.0% | |
AGTACTTACTTGTAATGCGA+TGG | + | chr5.3:1326076-1326095 | None:intergenic | 35.0% | |
AGTTAATGCAGCTAGGTATA+AGG | + | chr5.3:1323787-1323806 | None:intergenic | 35.0% | |
ATACAGAAAGACAGTGTTAG+AGG | - | chr5.3:1323701-1323720 | MS.gene024888:intron | 35.0% | |
ATATATTTGTGGTGACATGC+AGG | - | chr5.3:1323630-1323649 | MS.gene024888:intron | 35.0% | |
ATCCTATACAACTCGTACAT+TGG | - | chr5.3:1323821-1323840 | MS.gene024888:intron | 35.0% | |
ATCTACTCAGTCGATAAACT+TGG | - | chr5.3:1326378-1326397 | MS.gene024888:intron | 35.0% | |
ATTGTTGGCAGAATCTTACT+TGG | - | chr5.3:1323930-1323949 | MS.gene024888:intron | 35.0% | |
CGTTTGAGAAGATTCCTAAA+AGG | + | chr5.3:1326027-1326046 | None:intergenic | 35.0% | |
CTAAAAGTCTAGCACATGTT+TGG | - | chr5.3:1325363-1325382 | MS.gene024888:intron | 35.0% | |
CTATGTACGTACGTGTAATT+TGG | + | chr5.3:1324891-1324910 | None:intergenic | 35.0% | |
CTTATGTTCGGTTATGATGT+TGG | - | chr5.3:1322514-1322533 | MS.gene024888:CDS | 35.0% | |
CTTCATGAACATGCTAATGT+CGG | - | chr5.3:1324246-1324265 | MS.gene024888:CDS | 35.0% | |
GAAAAAACCAGCAATCAACA+TGG | + | chr5.3:1323859-1323878 | None:intergenic | 35.0% | |
GAATAAATTCAGGGGTGATT+TGG | + | chr5.3:1323142-1323161 | None:intergenic | 35.0% | |
GCACATATTGAAAAGATGGA+GGG | + | chr5.3:1322741-1322760 | None:intergenic | 35.0% | |
GCTGTACTTAAAAAGATTCG+TGG | - | chr5.3:1325931-1325950 | MS.gene024888:intron | 35.0% | |
GGGAAAAACTTCTTCAGAAA+TGG | + | chr5.3:1323675-1323694 | None:intergenic | 35.0% | |
GTTAGCAAACAAAATCCCAA+TGG | + | chr5.3:1325131-1325150 | None:intergenic | 35.0% | |
GTTGCGTTGAAACAATAACT+AGG | + | chr5.3:1322635-1322654 | None:intergenic | 35.0% | |
TACTTGTAATGCGATGGAAA+TGG | + | chr5.3:1326070-1326089 | None:intergenic | 35.0% | |
TCATTATCCACATCATCACA+TGG | + | chr5.3:1323251-1323270 | None:intergenic | 35.0% | |
TCCTATACAACTCGTACATT+GGG | - | chr5.3:1323822-1323841 | MS.gene024888:intron | 35.0% | |
TCGTGATAGCAATCATTCTT+GGG | - | chr5.3:1326451-1326470 | MS.gene024888:intron | 35.0% | |
TGAGTAGATAGACACAATTG+TGG | + | chr5.3:1326367-1326386 | None:intergenic | 35.0% | |
TGTTAGTGCCATAATTGACA+AGG | + | chr5.3:1325153-1325172 | None:intergenic | 35.0% | |
TTGGATTCCCATGTTATGTT+CGG | + | chr5.3:1323355-1323374 | None:intergenic | 35.0% | |
TTGTGATCATGCAGAATTTC+AGG | - | chr5.3:1325781-1325800 | MS.gene024888:intron | 35.0% | |
! | CATCAATGGACCAAAAGTAT+TGG | + | chr5.3:1324572-1324591 | None:intergenic | 35.0% |
! | CTCTCTGTCATTTCTTCAAT+TGG | + | chr5.3:1326801-1326820 | None:intergenic | 35.0% |
! | GTCAATCTTTGTGCTTTTCT+TGG | - | chr5.3:1326755-1326774 | MS.gene024888:intron | 35.0% |
!! | AAGTGAATTTGGTTTGGTGA+AGG | + | chr5.3:1323491-1323510 | None:intergenic | 35.0% |
!! | ATAGCCTTTTGAAAGATCGT+CGG | + | chr5.3:1326496-1326515 | None:intergenic | 35.0% |
!!! | TTTTGTCATCACTTGTTGTG+TGG | - | chr5.3:1324812-1324831 | MS.gene024888:intron | 35.0% |
!!! | TTTTTGAGATTTCAGCTCCA+AGG | - | chr5.3:1323453-1323472 | MS.gene024888:CDS | 35.0% |
AAAAGCCTGAGCAATGACAA+AGG | + | chr5.3:1326670-1326689 | None:intergenic | 40.0% | |
AAAGCTCCACGAATTCTTGA+AGG | + | chr5.3:1325082-1325101 | None:intergenic | 40.0% | |
ACTGTCTTTCTGTATACTGC+TGG | + | chr5.3:1323696-1323715 | None:intergenic | 40.0% | |
AGATAGACACAATTGTGGAG+AGG | + | chr5.3:1326362-1326381 | None:intergenic | 40.0% | |
AGCAATCATTCTTGGGATCA+AGG | - | chr5.3:1326458-1326477 | MS.gene024888:intron | 40.0% | |
AGTTGAGAGATTTAGGGAAG+TGG | + | chr5.3:1323392-1323411 | None:intergenic | 40.0% | |
ATAACCGAACATAAGACCAC+CGG | + | chr5.3:1322509-1322528 | None:intergenic | 40.0% | |
ATCTTACTTGGTTGTGGTGT+TGG | - | chr5.3:1323942-1323961 | MS.gene024888:intron | 40.0% | |
ATGAACCCCGAACATAACAT+GGG | - | chr5.3:1323345-1323364 | MS.gene024888:CDS | 40.0% | |
ATTGCACCTTCAAGAATTCG+TGG | - | chr5.3:1325073-1325092 | MS.gene024888:intron | 40.0% | |
ATTGGTATGTTCTTCGTCTC+GGG | + | chr5.3:1326783-1326802 | None:intergenic | 40.0% | |
CACAGTTGCTCTTAGTCATT+AGG | - | chr5.3:1324088-1324107 | MS.gene024888:intron | 40.0% | |
CAGGTATTCCAACAATTCAC+CGG | - | chr5.3:1326234-1326253 | MS.gene024888:intron | 40.0% | |
CAGTAATCACAGCTGAATAG+AGG | + | chr5.3:1326326-1326345 | None:intergenic | 40.0% | |
CATTCCGACGATCTTTCAAA+AGG | - | chr5.3:1326489-1326508 | MS.gene024888:intron | 40.0% | |
CCTATACAACTCGTACATTG+GGG | - | chr5.3:1323823-1323842 | MS.gene024888:intron | 40.0% | |
CTCTATTCAGCTGTGATTAC+TGG | - | chr5.3:1326324-1326343 | MS.gene024888:intron | 40.0% | |
CTGTCTTTCTGTATACTGCT+GGG | + | chr5.3:1323695-1323714 | None:intergenic | 40.0% | |
GGAATCTTCTTGTTCTTCTC+TGG | - | chr5.3:1326717-1326736 | MS.gene024888:intron | 40.0% | |
GTAGACACTTCATACAAACG+TGG | - | chr5.3:1325475-1325494 | MS.gene024888:CDS | 40.0% | |
GTCGTGATAGCAATCATTCT+TGG | - | chr5.3:1326450-1326469 | MS.gene024888:intron | 40.0% | |
TACACTTGCCATGTTGTTAG+CGG | + | chr5.3:1325407-1325426 | None:intergenic | 40.0% | |
TAGTCTACAAGGGTCAACTT+TGG | - | chr5.3:1325441-1325460 | MS.gene024888:CDS | 40.0% | |
TCATGTATTATGGCTGCTAC+CGG | - | chr5.3:1322487-1322506 | MS.gene024888:CDS | 40.0% | |
TGAAAGATCGTCGGAATGAT+CGG | + | chr5.3:1326487-1326506 | None:intergenic | 40.0% | |
TGATCATGCAGAATTTCAGG+TGG | - | chr5.3:1325784-1325803 | MS.gene024888:intron | 40.0% | |
TGGATTCCCATGTTATGTTC+GGG | + | chr5.3:1323354-1323373 | None:intergenic | 40.0% | |
TTGGAGACTATCTCTTGGTT+TGG | - | chr5.3:1325813-1325832 | MS.gene024888:intron | 40.0% | |
TTTGATATAGACGCACGCAA+TGG | + | chr5.3:1324329-1324348 | None:intergenic | 40.0% | |
! | ACCAGTGTTGTTCAATACAG+TGG | - | chr5.3:1326281-1326300 | MS.gene024888:intron | 40.0% |
! | AGAGAGTATGGAAGCAACAT+TGG | - | chr5.3:1326817-1326836 | MS.gene024888:intron | 40.0% |
! | ATGCAGAATTTCAGGTGGAT+GGG | - | chr5.3:1325789-1325808 | MS.gene024888:intron | 40.0% |
! | CCAGTGTTGTTCAATACAGT+GGG | - | chr5.3:1326282-1326301 | MS.gene024888:intron | 40.0% |
! | GCAATTTCTGAGAGGAAAAC+TGG | + | chr5.3:1325058-1325077 | None:intergenic | 40.0% |
! | GGATGATAAGGACTTTGGAA+TGG | + | chr5.3:1324541-1324560 | None:intergenic | 40.0% |
! | GGTTATGATGTTGGTGTTTC+AGG | - | chr5.3:1322523-1322542 | MS.gene024888:CDS | 40.0% |
! | GTACAGCTTTTCCTTCTTCA+AGG | + | chr5.3:1325918-1325937 | None:intergenic | 40.0% |
! | TCAATCAAAGTATCTGGCAC+TGG | + | chr5.3:1325604-1325623 | None:intergenic | 40.0% |
! | TGGAAATGGTAAGTTGAGGT+CGG | + | chr5.3:1326056-1326075 | None:intergenic | 40.0% |
! | TTGAAGGTGCAATTTCTGAG+AGG | + | chr5.3:1325066-1325085 | None:intergenic | 40.0% |
!! | TATGGAAGCAACATTGGTTC+TGG | - | chr5.3:1326823-1326842 | MS.gene024888:intron | 40.0% |
!! | TGAATTTGGTTTGGTGAAGG+TGG | + | chr5.3:1323488-1323507 | None:intergenic | 40.0% |
!! | TTGGTTCTGGAAGAGGTTTA+TGG | - | chr5.3:1326836-1326855 | MS.gene024888:CDS | 40.0% |
!!! | GCTGGTTTTTTCTTCATTGG+TGG | - | chr5.3:1323867-1323886 | MS.gene024888:intron | 40.0% |
!!! | TGGTGTTGGTTTTGCTAATC+AGG | - | chr5.3:1323956-1323975 | MS.gene024888:intron | 40.0% |
AACCTTGCCATGCTCATTGT+TGG | - | chr5.3:1323915-1323934 | MS.gene024888:intron | 45.0% | |
AGAAAGACAGTGTTAGAGGC+AGG | - | chr5.3:1323705-1323724 | MS.gene024888:intron | 45.0% | |
AGTGGCTCACATGCAAAGAT+TGG | + | chr5.3:1323374-1323393 | None:intergenic | 45.0% | |
CAACATTGAACCCGAGTTCT+TGG | - | chr5.3:1325960-1325979 | MS.gene024888:intron | 45.0% | |
CATGAACCCCGAACATAACA+TGG | - | chr5.3:1323344-1323363 | MS.gene024888:CDS | 45.0% | |
CCCACTGTATTGAACAACAC+TGG | + | chr5.3:1326285-1326304 | None:intergenic | 45.0% | |
CCCCAATGTACGAGTTGTAT+AGG | + | chr5.3:1323826-1323845 | None:intergenic | 45.0% | |
CTTCTTGTTCTTCTCTGGCT+GGG | - | chr5.3:1326722-1326741 | MS.gene024888:intron | 45.0% | |
GAACTCGGGTTCAATGTTGT+CGG | + | chr5.3:1325959-1325978 | None:intergenic | 45.0% | |
GATTCTGCCAACAATGAGCA+TGG | + | chr5.3:1323925-1323944 | None:intergenic | 45.0% | |
GCGATGGAAATGGTAAGTTG+AGG | + | chr5.3:1326060-1326079 | None:intergenic | 45.0% | |
GGATTCCCATGTTATGTTCG+GGG | + | chr5.3:1323353-1323372 | None:intergenic | 45.0% | |
GGCAGAATCTTACTTGGTTG+TGG | - | chr5.3:1323936-1323955 | MS.gene024888:intron | 45.0% | |
GTTCACCTTTGTCATTGCTC+AGG | - | chr5.3:1326662-1326681 | MS.gene024888:intron | 45.0% | |
TAATGGTTAGTGTGTGGTGC+CGG | - | chr5.3:1325278-1325297 | MS.gene024888:intron | 45.0% | |
TATTTGTGGTGACATGCAGG+TGG | - | chr5.3:1323633-1323652 | MS.gene024888:intron | 45.0% | |
TCCAGCTCAATGTCACCATT+GGG | - | chr5.3:1325113-1325132 | MS.gene024888:intron | 45.0% | |
TCGAGTGGAAATGTCTCACT+TGG | + | chr5.3:1326597-1326616 | None:intergenic | 45.0% | |
TCTACAAGGGTCAACTTTGG+TGG | - | chr5.3:1325444-1325463 | MS.gene024888:CDS | 45.0% | |
TCTTCTTGTTCTTCTCTGGC+TGG | - | chr5.3:1326721-1326740 | MS.gene024888:intron | 45.0% | |
TGTGTTCTCCGCTAACAACA+TGG | - | chr5.3:1325396-1325415 | MS.gene024888:CDS | 45.0% | |
TTCCAGCTCAATGTCACCAT+TGG | - | chr5.3:1325112-1325131 | MS.gene024888:intron | 45.0% | |
! | AAACATGATCGCGTTGATGC+CGG | + | chr5.3:1326256-1326275 | None:intergenic | 45.0% |
! | AAGAGGTCAAGCACCCTTTT+AGG | - | chr5.3:1326010-1326029 | MS.gene024888:intron | 45.0% |
! | AGACTCACCATGTTGATTGC+TGG | - | chr5.3:1323849-1323868 | MS.gene024888:intron | 45.0% |
! | CATGCAGAATTTCAGGTGGA+TGG | - | chr5.3:1325788-1325807 | MS.gene024888:intron | 45.0% |
! | TATCTGGCACTGGACTATGT+GGG | + | chr5.3:1325594-1325613 | None:intergenic | 45.0% |
! | TGCAGAATTTCAGGTGGATG+GGG | - | chr5.3:1325790-1325809 | MS.gene024888:intron | 45.0% |
!! | AGACTATCTCTTGGTTTGGC+TGG | - | chr5.3:1325817-1325836 | MS.gene024888:intron | 45.0% |
!! | AGCAACATTGGTTCTGGAAG+AGG | - | chr5.3:1326829-1326848 | MS.gene024888:CDS | 45.0% |
!! | ATTTGGTTTGGTGAAGGTGG+TGG | + | chr5.3:1323485-1323504 | None:intergenic | 45.0% |
!! | TTTGGTTTGGTGAAGGTGGT+GGG | + | chr5.3:1323484-1323503 | None:intergenic | 45.0% |
!! | TTAATTAATATATATATTTG+TGG | - | chr5.3:1323619-1323638 | MS.gene024888:intron | 5.0% |
ACCTCGCTCAATGAGACTGT+TGG | + | chr5.3:1325893-1325912 | None:intergenic | 50.0% | |
CCAGCACTTCTCCTAACAGT+GGG | - | chr5.3:1325844-1325863 | MS.gene024888:intron | 50.0% | |
CCTCGCTCAATGAGACTGTT+GGG | + | chr5.3:1325892-1325911 | None:intergenic | 50.0% | |
CGTTGATGCCGGTGAATTGT+TGG | + | chr5.3:1326245-1326264 | None:intergenic | 50.0% | |
CTCGCAAAGCTCCAAGAACT+CGG | + | chr5.3:1325974-1325993 | None:intergenic | 50.0% | |
CTCGCTCAATGAGACTGTTG+GGG | + | chr5.3:1325891-1325910 | None:intergenic | 50.0% | |
CTTGGAATAAGCCAACCGAG+AGG | + | chr5.3:1326579-1326598 | None:intergenic | 50.0% | |
GGATTGTCACACGTGTCAGT+GGG | - | chr5.3:1324440-1324459 | MS.gene024888:intron | 50.0% | |
TCCCAATGGTGACATTGAGC+TGG | + | chr5.3:1325117-1325136 | None:intergenic | 50.0% | |
TCGCAAAGCTCCAAGAACTC+GGG | + | chr5.3:1325973-1325992 | None:intergenic | 50.0% | |
TCGCTCAATGAGACTGTTGG+GGG | + | chr5.3:1325890-1325909 | None:intergenic | 50.0% | |
TGCCAACAATGAGCATGGCA+AGG | + | chr5.3:1323920-1323939 | None:intergenic | 50.0% | |
TGGATTGTCACACGTGTCAG+TGG | - | chr5.3:1324439-1324458 | MS.gene024888:intron | 50.0% | |
TGGGGTTGGAGACTATCTCT+TGG | - | chr5.3:1325808-1325827 | MS.gene024888:intron | 50.0% | |
TGTATTATGGCTGCTACCGG+TGG | - | chr5.3:1322490-1322509 | MS.gene024888:CDS | 50.0% | |
! | GAATTTCAGGTGGATGGGGT+TGG | - | chr5.3:1325794-1325813 | MS.gene024888:intron | 50.0% |
! | GTATCTGGCACTGGACTATG+TGG | + | chr5.3:1325595-1325614 | None:intergenic | 50.0% |
!! | CCACTGTTAGGAGAAGTGCT+GGG | + | chr5.3:1325846-1325865 | None:intergenic | 50.0% |
!! | GCTACCGGTGGTCTTATGTT+CGG | - | chr5.3:1322502-1322521 | MS.gene024888:CDS | 50.0% |
AGTGGGTGCACTCATGGTTG+TGG | - | chr5.3:1325861-1325880 | MS.gene024888:intron | 55.0% | |
CCATGAGTGCACCCACTGTT+AGG | + | chr5.3:1325858-1325877 | None:intergenic | 55.0% | |
CCCAACAGTCTCATTGAGCG+AGG | - | chr5.3:1325889-1325908 | MS.gene024888:intron | 55.0% | |
CCCAGCACTTCTCCTAACAG+TGG | - | chr5.3:1325843-1325862 | MS.gene024888:intron | 55.0% | |
CCTAACAGTGGGTGCACTCA+TGG | - | chr5.3:1325855-1325874 | MS.gene024888:intron | 55.0% | |
CGAGTTCTTGGAGCTTTGCG+AGG | - | chr5.3:1325972-1325991 | MS.gene024888:intron | 55.0% | |
CTTTCGTGTCTGCCTTCGCT+TGG | - | chr5.3:1326544-1326563 | MS.gene024888:intron | 55.0% | |
TGGAGCTTTGCGAGGCAAGT+CGG | - | chr5.3:1325980-1325999 | MS.gene024888:intron | 55.0% | |
TGTCTGCCTTCGCTTGGTCT+TGG | - | chr5.3:1326550-1326569 | MS.gene024888:intron | 55.0% | |
! | CCCACTGTTAGGAGAAGTGC+TGG | + | chr5.3:1325847-1325866 | None:intergenic | 55.0% |
! | GGCAAGTCGGGTTGCTAAAG+AGG | - | chr5.3:1325993-1326012 | MS.gene024888:intron | 55.0% |
! | GTCTGCCTTCGCTTGGTCTT+GGG | - | chr5.3:1326551-1326570 | MS.gene024888:intron | 55.0% |
!! | TCTGCCTTCGCTTGGTCTTG+GGG | - | chr5.3:1326552-1326571 | MS.gene024888:intron | 55.0% |
AAAATCACCCCCGCCACTCG+TGG | + | chr5.3:1322437-1322456 | None:intergenic | 60.0% | |
AGGACCCCAAGACCAAGCGA+AGG | + | chr5.3:1326559-1326578 | None:intergenic | 60.0% | |
CCACTCGAGACTCGATCAGC+TGG | - | chr5.3:1326609-1326628 | MS.gene024888:intron | 60.0% | |
CCAGCTGATCGAGTCTCGAG+TGG | + | chr5.3:1326612-1326631 | None:intergenic | 60.0% | |
GAGCGAGGTCGCCTTGAAGA+AGG | - | chr5.3:1325904-1325923 | MS.gene024888:intron | 60.0% | |
GGAGCTTTGCGAGGCAAGTC+GGG | - | chr5.3:1325981-1326000 | MS.gene024888:intron | 60.0% | |
!! | GAAGGTGGTGGGAGACTCCT+TGG | + | chr5.3:1323473-1323492 | None:intergenic | 60.0% |
!! | GAGTGGCGGGGGTGATTTTG+AGG | - | chr5.3:1322438-1322457 | MS.gene024888:CDS | 60.0% |
!! | GCTTGGTCTTGGGGTCCTCT+CGG | - | chr5.3:1326561-1326580 | MS.gene024888:intron | 60.0% |
GGTCTTGGGGTCCTCTCGGT+TGG | - | chr5.3:1326565-1326584 | MS.gene024888:intron | 65.0% | |
ACTCGTGGCGAAGCCTCCGC+CGG | + | chr5.3:1322422-1322441 | None:intergenic | 70.0% | |
AGGCTTCGCCACGAGTGGCG+GGG | - | chr5.3:1322426-1322445 | MS.gene024888:CDS | 70.0% | |
GAGGCTTCGCCACGAGTGGC+GGG | - | chr5.3:1322425-1322444 | MS.gene024888:CDS | 70.0% | |
GGAGGCTTCGCCACGAGTGG+CGG | - | chr5.3:1322424-1322443 | MS.gene024888:CDS | 70.0% | |
GGCGGAGGCTTCGCCACGAG+TGG | - | chr5.3:1322421-1322440 | MS.gene024888:CDS | 75.0% | |
GGCTTCGCCACGAGTGGCGG+GGG | - | chr5.3:1322427-1322446 | MS.gene024888:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 1322415 | 1326956 | 1322415 | ID=MS.gene024888 |
chr5.3 | mRNA | 1322415 | 1326956 | 1322415 | ID=MS.gene024888.t1;Parent=MS.gene024888 |
chr5.3 | exon | 1326827 | 1326956 | 1326827 | ID=MS.gene024888.t1.exon1;Parent=MS.gene024888.t1 |
chr5.3 | CDS | 1326827 | 1326956 | 1326827 | ID=cds.MS.gene024888.t1;Parent=MS.gene024888.t1 |
chr5.3 | exon | 1325394 | 1325719 | 1325394 | ID=MS.gene024888.t1.exon2;Parent=MS.gene024888.t1 |
chr5.3 | CDS | 1325394 | 1325719 | 1325394 | ID=cds.MS.gene024888.t1;Parent=MS.gene024888.t1 |
chr5.3 | exon | 1324198 | 1324322 | 1324198 | ID=MS.gene024888.t1.exon3;Parent=MS.gene024888.t1 |
chr5.3 | CDS | 1324198 | 1324322 | 1324198 | ID=cds.MS.gene024888.t1;Parent=MS.gene024888.t1 |
chr5.3 | exon | 1323285 | 1323576 | 1323285 | ID=MS.gene024888.t1.exon4;Parent=MS.gene024888.t1 |
chr5.3 | CDS | 1323285 | 1323576 | 1323285 | ID=cds.MS.gene024888.t1;Parent=MS.gene024888.t1 |
chr5.3 | exon | 1322415 | 1323134 | 1322415 | ID=MS.gene024888.t1.exon5;Parent=MS.gene024888.t1 |
chr5.3 | CDS | 1322415 | 1323134 | 1322415 | ID=cds.MS.gene024888.t1;Parent=MS.gene024888.t1 |
Gene Sequence |
Protein sequence |