Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015968.t1 | AES58965.2 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.00E+00 | 1256.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015968.t1 | Q9SUU1 | 65.6 | 666 | 200 | 4 | 3 | 647 | 7 | 664 | 5.1e-255 | 881.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015968.t1 | G7I6E0 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.0e+00 | 1256.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79489 | MS.gene015968 | PPI |
| MS.gene015968 | MS.gene37317 | PPI |
| MS.gene86346 | MS.gene015968 | PPI |
| MS.gene015968 | MS.gene026799 | PPI |
| MS.gene015968 | MS.gene89068 | PPI |
| MS.gene015968 | MS.gene034033 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015968.t1 | MTR_1g011840 | 96.909 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.0 | 1302 |
| MS.gene015968.t1 | MTR_3g107730 | 74.704 | 676 | 155 | 3 | 2 | 662 | 3 | 677 | 0.0 | 1027 |
| MS.gene015968.t1 | MTR_0459s0020 | 66.410 | 649 | 204 | 5 | 3 | 642 | 15 | 658 | 0.0 | 877 |
| MS.gene015968.t1 | MTR_3g107730 | 78.474 | 511 | 110 | 0 | 2 | 512 | 3 | 513 | 0.0 | 848 |
| MS.gene015968.t1 | MTR_0366s0020 | 59.409 | 643 | 175 | 4 | 3 | 642 | 15 | 574 | 0.0 | 748 |
| MS.gene015968.t1 | MTR_7g110000 | 55.758 | 660 | 271 | 4 | 3 | 648 | 7 | 659 | 0.0 | 726 |
| MS.gene015968.t1 | MTR_2g032690 | 54.025 | 646 | 278 | 4 | 3 | 636 | 7 | 645 | 0.0 | 710 |
| MS.gene015968.t1 | MTR_3g077670 | 55.710 | 648 | 267 | 5 | 3 | 636 | 7 | 648 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015968.t1 | AT1G15460 | 65.533 | 676 | 204 | 7 | 4 | 669 | 13 | 669 | 0.0 | 911 |
| MS.gene015968.t1 | AT1G15460 | 65.533 | 676 | 204 | 7 | 4 | 669 | 13 | 669 | 0.0 | 911 |
| MS.gene015968.t1 | AT4G32510 | 64.296 | 689 | 202 | 5 | 3 | 670 | 7 | 672 | 0.0 | 905 |
| MS.gene015968.t1 | AT4G32510 | 65.517 | 667 | 201 | 4 | 3 | 648 | 7 | 665 | 0.0 | 904 |
| MS.gene015968.t1 | AT5G25430 | 66.718 | 646 | 209 | 2 | 2 | 641 | 8 | 653 | 0.0 | 904 |
| MS.gene015968.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene015968.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene015968.t1 | AT1G74810 | 63.811 | 677 | 216 | 6 | 3 | 669 | 12 | 669 | 0.0 | 889 |
| MS.gene015968.t1 | AT1G15460 | 68.760 | 605 | 179 | 3 | 4 | 598 | 13 | 617 | 0.0 | 870 |
| MS.gene015968.t1 | AT1G74810 | 64.407 | 649 | 202 | 6 | 31 | 669 | 8 | 637 | 0.0 | 861 |
| MS.gene015968.t1 | AT1G74810 | 64.407 | 649 | 202 | 6 | 31 | 669 | 8 | 637 | 0.0 | 861 |
| MS.gene015968.t1 | AT1G15460 | 64.605 | 582 | 177 | 7 | 98 | 669 | 1 | 563 | 0.0 | 772 |
| MS.gene015968.t1 | AT1G74810 | 62.715 | 582 | 188 | 6 | 98 | 669 | 1 | 563 | 0.0 | 753 |
| MS.gene015968.t1 | AT3G62270 | 56.366 | 644 | 265 | 4 | 3 | 636 | 7 | 644 | 0.0 | 737 |
| MS.gene015968.t1 | AT2G47160 | 57.298 | 644 | 258 | 4 | 3 | 636 | 7 | 643 | 0.0 | 737 |
| MS.gene015968.t1 | AT2G47160 | 55.306 | 669 | 257 | 5 | 3 | 636 | 7 | 668 | 0.0 | 727 |
| MS.gene015968.t1 | AT1G74810 | 62.385 | 545 | 176 | 6 | 135 | 669 | 1 | 526 | 0.0 | 699 |
| MS.gene015968.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene015968.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene015968.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
| MS.gene015968.t1 | AT3G06450 | 52.322 | 646 | 285 | 6 | 3 | 636 | 9 | 643 | 0.0 | 696 |
Find 148 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCCAGGGAATCAATTT+TGG | 0.152632 | 1.2:-9334657 | MS.gene015968:CDS |
| GCACTTCCTGTTATTGCTTT+TGG | 0.157279 | 1.2:-9337327 | MS.gene015968:CDS |
| TTATTATGATGCAGAGTTAT+TGG | 0.204927 | 1.2:-9333919 | MS.gene015968:CDS |
| GGAATTATCCACTCAATATT+TGG | 0.211492 | 1.2:-9336985 | MS.gene015968:CDS |
| TACTTACTTGTAGTGCCTTC+TGG | 0.214656 | 1.2:+9334606 | None:intergenic |
| GGATACCTACCTCCGTTCTT+TGG | 0.245672 | 1.2:-9334708 | MS.gene015968:CDS |
| TCGAGCTTCTACTATCATTT+TGG | 0.246718 | 1.2:+9333850 | None:intergenic |
| TCTTCGGTTATTCCTCTAAA+TGG | 0.254655 | 1.2:+9337450 | None:intergenic |
| CTTTGCTCATTAACTCTAAC+AGG | 0.255009 | 1.2:+9334796 | None:intergenic |
| ACTCTTATTTGCGGCATTCT+TGG | 0.263685 | 1.2:-9335512 | MS.gene015968:CDS |
| TACCCTTGCCATACATCTTT+GGG | 0.286144 | 1.2:-9335757 | MS.gene015968:CDS |
| CGATTATCACTAGGTTTACT+AGG | 0.288360 | 1.2:-9336579 | MS.gene015968:CDS |
| TCTGAATATGAGGAAATTAT+TGG | 0.289374 | 1.2:-9334196 | MS.gene015968:CDS |
| GTACCCTTGCCATACATCTT+TGG | 0.289747 | 1.2:-9335758 | MS.gene015968:CDS |
| GATACCTACCTCCGTTCTTT+GGG | 0.297206 | 1.2:-9334707 | MS.gene015968:CDS |
| AACAGCTTGGCACCTAATTC+TGG | 0.301971 | 1.2:+9336880 | None:intergenic |
| CTTGGTCTCCCTCCAGTAAA+TGG | 0.302633 | 1.2:-9335494 | MS.gene015968:CDS |
| CTGTACTGGTGTTAGAATAT+TGG | 0.303071 | 1.2:-9337379 | MS.gene015968:CDS |
| GTCCAGTGGTAGAGAGATTC+AGG | 0.305551 | 1.2:+9335880 | None:intergenic |
| TGGATGAGATGACAACTAAT+AGG | 0.313017 | 1.2:-9333899 | MS.gene015968:CDS |
| TAGGCATCTATATGTTTAAT+AGG | 0.315242 | 1.2:+9334823 | None:intergenic |
| AGGGTTGCAGAGGAATTATT+TGG | 0.316548 | 1.2:-9336559 | MS.gene015968:CDS |
| CGAGGTGTCATCGCAGATTA+TGG | 0.318939 | 1.2:-9336006 | MS.gene015968:CDS |
| CAATGAAGACAGACATATTC+AGG | 0.324753 | 1.2:-9333802 | MS.gene015968:intron |
| CATATCCCGGTAGATTCTTC+AGG | 0.332119 | 1.2:+9333589 | None:intergenic |
| TTTGTTCCAGGGTTTGTGTT+TGG | 0.335131 | 1.2:-9336645 | MS.gene015968:intron |
| GGATGAGATGACAACTAATA+GGG | 0.335188 | 1.2:-9333898 | MS.gene015968:CDS |
| ACTTACTTGTAGTGCCTTCT+GGG | 0.339945 | 1.2:+9334607 | None:intergenic |
| TTAGCTATGGGACCATTTAG+AGG | 0.350397 | 1.2:-9337462 | None:intergenic |
| TGCTCTCCAAAAGCAATAAC+AGG | 0.357844 | 1.2:+9337321 | None:intergenic |
| CAAAGAATATGTAGAAAGTT+GGG | 0.360953 | 1.2:+9337355 | None:intergenic |
| TTCCTTCTGTTGAGCCATCT+TGG | 0.365186 | 1.2:+9335676 | None:intergenic |
| ATTAACTCTAACAGGCAAAT+AGG | 0.368905 | 1.2:+9334804 | None:intergenic |
| TAAGTAGAAGTGCAAGAAAA+TGG | 0.370034 | 1.2:-9336265 | MS.gene015968:CDS |
| GGTTGCTTTGTCCACTTCCT+TGG | 0.370070 | 1.2:-9335906 | MS.gene015968:CDS |
| TTCCAACTGGTGTTCCTAGA+AGG | 0.374788 | 1.2:-9335927 | MS.gene015968:CDS |
| AATCGTAGTAGCTTAACTTA+TGG | 0.376260 | 1.2:-9333828 | MS.gene015968:CDS |
| CACTCTTCACCACCTTCCTT+CGG | 0.378699 | 1.2:+9335091 | None:intergenic |
| GTTGCTTTGTCCACTTCCTT+GGG | 0.379269 | 1.2:-9335905 | MS.gene015968:CDS |
| GGAAGCAACTCTGAATTATA+CGG | 0.384602 | 1.2:-9335045 | MS.gene015968:CDS |
| GCGAGCCGTGTTTATAGAAA+TGG | 0.386586 | 1.2:-9335016 | MS.gene015968:CDS |
| GAGCAACTTAATAGAGAAAC+AGG | 0.387278 | 1.2:-9337303 | MS.gene015968:intron |
| AGAAAATGGCGATATTTAAC+AGG | 0.388372 | 1.2:-9336251 | MS.gene015968:intron |
| TGAGGAAGGACTCCATTTAC+TGG | 0.394428 | 1.2:+9335482 | None:intergenic |
| ACCATTAGTGGTATATTATG+TGG | 0.395408 | 1.2:+9334169 | None:intergenic |
| TAAAGAGTTGGAGACTTTGA+AGG | 0.396140 | 1.2:-9334896 | MS.gene015968:CDS |
| AGAGTTTAGCGACTCTTAGA+AGG | 0.397727 | 1.2:-9335442 | MS.gene015968:CDS |
| AAGTCTTCCTTTGAAATCTT+CGG | 0.398151 | 1.2:+9337434 | None:intergenic |
| TAGAGGAATATAAATTTCAT+TGG | 0.405736 | 1.2:-9336349 | MS.gene015968:CDS |
| CTACCACTGGACTGTAGTTA+AGG | 0.410424 | 1.2:-9335869 | MS.gene015968:intron |
| TTTCATTGGCGCTATACAAA+TGG | 0.416111 | 1.2:-9336335 | MS.gene015968:CDS |
| CTTTCCCAAAATTGATTCCC+TGG | 0.417341 | 1.2:+9334652 | None:intergenic |
| GCAAAGAATATGTAGAAAGT+TGG | 0.420315 | 1.2:+9337354 | None:intergenic |
| AGTGGACAAAGCAACCTTCT+AGG | 0.424170 | 1.2:+9335913 | None:intergenic |
| TTTCATTCAACAGGCTATAG+AGG | 0.424803 | 1.2:-9336518 | MS.gene015968:intron |
| GGATTGACACGGATACCTAT+TGG | 0.428993 | 1.2:-9334319 | MS.gene015968:CDS |
| GGCTGAAAATCCCTTGTTAG+AGG | 0.430093 | 1.2:-9336366 | MS.gene015968:CDS |
| GGAAACAATATTCCACCAAT+AGG | 0.432037 | 1.2:+9334304 | None:intergenic |
| ATTCTTTAGACTCTTATTTG+CGG | 0.433984 | 1.2:-9335521 | MS.gene015968:intron |
| TCCACATAATATACCACTAA+TGG | 0.440446 | 1.2:-9334170 | MS.gene015968:intron |
| ATTAGATGCTTCTGAATATG+AGG | 0.443445 | 1.2:-9334206 | MS.gene015968:CDS |
| ATGGCAATTGATAGTCTCCC+AGG | 0.464102 | 1.2:-9334670 | MS.gene015968:CDS |
| TAGCCGTTCCTGTCATCAAA+AGG | 0.464519 | 1.2:-9334729 | MS.gene015968:CDS |
| GTCCAACATACTACCATCAT+TGG | 0.465983 | 1.2:+9335979 | None:intergenic |
| ATGAGAAGGAAGAAAGGTAA+TGG | 0.468317 | 1.2:+9334283 | None:intergenic |
| CTAAACTCTTAGTATGCATA+GGG | 0.468592 | 1.2:+9335456 | None:intergenic |
| GGTCAACCTTTGTTGATTGT+AGG | 0.469219 | 1.2:-9336961 | MS.gene015968:CDS |
| TCGGTATCTTGAACTCACTT+AGG | 0.471906 | 1.2:+9336390 | None:intergenic |
| ATTCCAGCAGTTATGATAGC+AGG | 0.473402 | 1.2:-9335728 | MS.gene015968:CDS |
| AGTTGGAACTTTGCTCGGTA+TGG | 0.479406 | 1.2:+9335942 | None:intergenic |
| TTGGTCTTAGGTTAAAGAGT+TGG | 0.495813 | 1.2:-9334908 | MS.gene015968:intron |
| TGGATTTGTGCAATCTGTAC+TGG | 0.499427 | 1.2:-9337393 | MS.gene015968:CDS |
| GAAGAATCTACCGGGATATG+AGG | 0.501335 | 1.2:-9333586 | None:intergenic |
| AAACCTGCTATCATAACTGC+TGG | 0.501635 | 1.2:+9335725 | None:intergenic |
| TTTCCCAAAATTGATTCCCT+GGG | 0.509771 | 1.2:+9334653 | None:intergenic |
| TAAGAGAGAGATTGCTTCCA+AGG | 0.511158 | 1.2:-9334255 | MS.gene015968:CDS |
| ATAAATGCCCCAAAGATGTA+TGG | 0.511521 | 1.2:+9335749 | None:intergenic |
| TGACTGCAACTGCAGGATAT+GGG | 0.516594 | 1.2:-9335785 | MS.gene015968:intron |
| AGATTATGGTGTTCCAATGA+TGG | 0.517455 | 1.2:-9335992 | MS.gene015968:CDS |
| AGAGTGCGAAGGAATGCATT+AGG | 0.517771 | 1.2:-9335074 | MS.gene015968:CDS |
| TTTAGCGACTCTTAGAAGGC+AGG | 0.520700 | 1.2:-9335438 | MS.gene015968:intron |
| AAATTTATATTCCTCTAACA+AGG | 0.528470 | 1.2:+9336355 | None:intergenic |
| GATTCAGGTTCCCAAGGAAG+TGG | 0.531361 | 1.2:+9335895 | None:intergenic |
| CTAAAAGTGATAAGGCGATA+AGG | 0.531741 | 1.2:+9334749 | None:intergenic |
| ATATCCCGGTAGATTCTTCA+GGG | 0.532773 | 1.2:+9333590 | None:intergenic |
| CTTACTTGTAGTGCCTTCTG+GGG | 0.534232 | 1.2:+9334608 | None:intergenic |
| AACCTGAATCTCTCTACCAC+TGG | 0.534784 | 1.2:-9335882 | MS.gene015968:CDS |
| ATACCGAGCAAAGTTCCAAC+TGG | 0.538542 | 1.2:-9335940 | MS.gene015968:CDS |
| GTTTACCCTGAAGAATCTAC+CGG | 0.545419 | 1.2:-9333595 | MS.gene015968:CDS |
| GAAATTTACAGTTGATCCGA+AGG | 0.547190 | 1.2:-9335107 | MS.gene015968:intron |
| ACACCAGTTGGAACTTTGCT+CGG | 0.549532 | 1.2:+9335937 | None:intergenic |
| CAATCTGTTATGGATTGACA+CGG | 0.550652 | 1.2:-9334330 | MS.gene015968:CDS |
| AATTTATATTCCTCTAACAA+GGG | 0.556470 | 1.2:+9336356 | None:intergenic |
| TTTACAGTTGATCCGAAGGA+AGG | 0.560146 | 1.2:-9335103 | MS.gene015968:intron |
| GATTATCACTAGGTTTACTA+GGG | 0.562886 | 1.2:-9336578 | MS.gene015968:CDS |
| AGGAACGGCTAAAAGTGATA+AGG | 0.563689 | 1.2:+9334741 | None:intergenic |
| TTGACATCCACAGCTATATG+TGG | 0.566865 | 1.2:-9337006 | MS.gene015968:CDS |
| ATGCATGTTCGATTATCACT+AGG | 0.567007 | 1.2:-9336588 | MS.gene015968:CDS |
| GCTAAACTCTTAGTATGCAT+AGG | 0.567941 | 1.2:+9335455 | None:intergenic |
| TTCCAATGATGGTAGTATGT+TGG | 0.573433 | 1.2:-9335981 | MS.gene015968:CDS |
| ATAGCTATGAGAAGGAAGAA+AGG | 0.575155 | 1.2:+9334277 | None:intergenic |
| TAGTTTGCATCGAATAACCT+TGG | 0.577666 | 1.2:+9334238 | None:intergenic |
| TTCCAAGATGGCTCAACAGA+AGG | 0.577993 | 1.2:-9335678 | MS.gene015968:CDS |
| TATGCATAGGGGACTGAGGA+AGG | 0.581537 | 1.2:+9335468 | None:intergenic |
| TGCCCCAAAGATGTATGGCA+AGG | 0.582072 | 1.2:+9335754 | None:intergenic |
| ACATCATAGTGGTAAGCAGA+TGG | 0.586567 | 1.2:+9335638 | None:intergenic |
| GAGACTACCTCCTCATATCC+CGG | 0.588192 | 1.2:+9333576 | None:intergenic |
| TAGAGAGATTCAGGTTCCCA+AGG | 0.590686 | 1.2:+9335889 | None:intergenic |
| ACCCTTGCCATACATCTTTG+GGG | 0.593909 | 1.2:-9335756 | MS.gene015968:CDS |
| GGCATCCATTTCTATAAACA+CGG | 0.597444 | 1.2:+9335011 | None:intergenic |
| AGCAAAATATCCCCAAAGAA+CGG | 0.599664 | 1.2:+9334696 | None:intergenic |
| ATACCTACCTCCGTTCTTTG+GGG | 0.600323 | 1.2:-9334706 | MS.gene015968:CDS |
| GGAATAACCGAAGATTTCAA+AGG | 0.600913 | 1.2:-9337441 | MS.gene015968:CDS |
| AAAGAATATGTAGAAAGTTG+GGG | 0.602432 | 1.2:+9337356 | None:intergenic |
| ATTATCCACTCAATATTTGG+TGG | 0.603688 | 1.2:-9336982 | MS.gene015968:CDS |
| GCCCCAAAGATGTATGGCAA+GGG | 0.606508 | 1.2:+9335755 | None:intergenic |
| TAGGTTTACTAGGGTTGCAG+AGG | 0.607582 | 1.2:-9336569 | MS.gene015968:CDS |
| GAAGGTGGTGAAGAGTGCGA+AGG | 0.614475 | 1.2:-9335085 | MS.gene015968:CDS |
| ACAGTTGATCCGAAGGAAGG+TGG | 0.614712 | 1.2:-9335100 | MS.gene015968:intron |
| ATGGTGTACATGATAACAGT+TGG | 0.615199 | 1.2:+9336928 | None:intergenic |
| TTGACACGGATACCTATTGG+TGG | 0.616417 | 1.2:-9334316 | MS.gene015968:CDS |
| TCTTGCACTTCTACTTACCA+TGG | 0.616641 | 1.2:+9336271 | None:intergenic |
| TATCCCCAAAGAACGGAGGT+AGG | 0.621214 | 1.2:+9334703 | None:intergenic |
| TCTCTCTTATAGCTATGAGA+AGG | 0.622750 | 1.2:+9334269 | None:intergenic |
| GTTGACCACCAAATATTGAG+TGG | 0.625187 | 1.2:+9336977 | None:intergenic |
| AATGTAGCTATTGTCTTGTG+TGG | 0.627927 | 1.2:+9334379 | None:intergenic |
| GAAGGACTCCATTTACTGGA+GGG | 0.628004 | 1.2:+9335486 | None:intergenic |
| TTACTTGTAGTGCCTTCTGG+GGG | 0.629233 | 1.2:+9334609 | None:intergenic |
| ATTCAATCAGGGTGCATACG+AGG | 0.629254 | 1.2:-9336024 | MS.gene015968:intron |
| TGGCAATTGATAGTCTCCCA+GGG | 0.629445 | 1.2:-9334669 | MS.gene015968:CDS |
| TCATAGCGTAGCTTCCAAGA+TGG | 0.632289 | 1.2:-9335690 | MS.gene015968:CDS |
| AGAGTTGGAGACTTTGAAGG+AGG | 0.634262 | 1.2:-9334893 | MS.gene015968:CDS |
| GATAATTCCACATATAGCTG+TGG | 0.636977 | 1.2:+9336999 | None:intergenic |
| GATGAGATGACAACTAATAG+GGG | 0.637701 | 1.2:-9333897 | MS.gene015968:CDS |
| AAGGAATGCATTAGGCAACA+AGG | 0.639810 | 1.2:-9335066 | MS.gene015968:CDS |
| AACCTTCTAGGAACACCAGT+TGG | 0.641372 | 1.2:+9335925 | None:intergenic |
| TGGTACTGACTCTACAAATG+AGG | 0.649995 | 1.2:+9334399 | None:intergenic |
| GCAACTGCAGGATATGGGAA+AGG | 0.654624 | 1.2:-9335780 | MS.gene015968:intron |
| TTAGTATGCATAGGGGACTG+AGG | 0.656982 | 1.2:+9335464 | None:intergenic |
| AAGTGAGTTCAAGATACCGA+AGG | 0.667136 | 1.2:-9336387 | MS.gene015968:CDS |
| AACAATACTTACGGTAGGCG+CGG | 0.669012 | 1.2:+9334990 | None:intergenic |
| GCAACTCCTACAATCAACAA+AGG | 0.672535 | 1.2:+9336955 | None:intergenic |
| GGAAGGACTCCATTTACTGG+AGG | 0.678944 | 1.2:+9335485 | None:intergenic |
| TTTACCCTGAAGAATCTACC+GGG | 0.685166 | 1.2:-9333594 | MS.gene015968:CDS |
| AGCCTGTTGAATGAAAAGAA+CGG | 0.705325 | 1.2:+9336525 | None:intergenic |
| AAAATATCCCCAAAGAACGG+AGG | 0.705867 | 1.2:+9334699 | None:intergenic |
| GTACCTTAACTACAGTCCAG+TGG | 0.707187 | 1.2:+9335866 | None:intergenic |
| TAAACTCTTAGTATGCATAG+GGG | 0.760737 | 1.2:+9335457 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAGAATTAGTTATAAT+TGG | + | chr1.2:9337317-9337336 | None:intergenic | 10.0% |
| !!! | TTCTAGTTTATATAAAAAAT+GGG | + | chr1.2:9335728-9335747 | None:intergenic | 10.0% |
| !! | ATGAAAACTAATGAAAAAAA+TGG | - | chr1.2:9336179-9336198 | MS.gene015968:intron | 15.0% |
| !! | GATTATTAATTCTACAAATA+TGG | + | chr1.2:9336544-9336563 | None:intergenic | 15.0% |
| !!! | AACTCTTTATTTTATGTTTA+TGG | - | chr1.2:9337411-9337430 | MS.gene015968:CDS | 15.0% |
| !!! | ATTTTGAAACTATATTTGAA+AGG | + | chr1.2:9333780-9333799 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTATTTGGTCTT+AGG | - | chr1.2:9336124-9336143 | MS.gene015968:intron | 15.0% |
| !!! | CTTCTAGTTTATATAAAAAA+TGG | + | chr1.2:9335729-9335748 | None:intergenic | 15.0% |
| !!! | TAGAATTTTATCAGATTTAT+AGG | + | chr1.2:9336944-9336963 | None:intergenic | 15.0% |
| !!! | TATTTATGTTATTTGATCTA+TGG | - | chr1.2:9333805-9333824 | MS.gene015968:CDS | 15.0% |
| !!! | TTATATATATACATGCTTTT+AGG | + | chr1.2:9337026-9337045 | None:intergenic | 15.0% |
| !!! | TTGAATTTTATAAACAAGAT+TGG | - | chr1.2:9333631-9333650 | MS.gene015968:intron | 15.0% |
| !!! | TTTTTCATTAGTTTTCATTA+CGG | + | chr1.2:9336177-9336196 | None:intergenic | 15.0% |
| !! | AAATTTATATTCCTCTAACA+AGG | + | chr1.2:9334692-9334711 | None:intergenic | 20.0% |
| !! | AACATACTGAAATTGATAAA+TGG | + | chr1.2:9336914-9336933 | None:intergenic | 20.0% |
| !! | AATTGTGAAGTTAAAATACT+AGG | + | chr1.2:9334615-9334634 | None:intergenic | 20.0% |
| !! | AATTTATATTCCTCTAACAA+GGG | + | chr1.2:9334691-9334710 | None:intergenic | 20.0% |
| !! | AGTAGTAAATATTTAGACTT+CGG | + | chr1.2:9334828-9334847 | None:intergenic | 20.0% |
| !! | ATTAAACTCTTTGATCTATA+AGG | - | chr1.2:9333964-9333983 | MS.gene015968:CDS | 20.0% |
| !! | ATTAATTCTACAAATATGGA+AGG | + | chr1.2:9336540-9336559 | None:intergenic | 20.0% |
| !! | CAAATAAAAAAACTCTTTCA+AGG | - | chr1.2:9337272-9337291 | MS.gene015968:intron | 20.0% |
| !! | TAAAAAAACATTGACATTGT+AGG | + | chr1.2:9334891-9334910 | None:intergenic | 20.0% |
| !! | TAATAAAAAATGTTCACCAT+TGG | + | chr1.2:9336115-9336134 | None:intergenic | 20.0% |
| !! | TAGAGGAATATAAATTTCAT+TGG | - | chr1.2:9334695-9334714 | MS.gene015968:CDS | 20.0% |
| !! | TTAAACTCTTTGATCTATAA+GGG | - | chr1.2:9333965-9333984 | MS.gene015968:CDS | 20.0% |
| !!! | AAACTATATTTGAAAGGTTT+TGG | + | chr1.2:9333774-9333793 | None:intergenic | 20.0% |
| !!! | ATGCTAATGTTTAACTTTTA+TGG | - | chr1.2:9334371-9334390 | MS.gene015968:CDS | 20.0% |
| !!! | CTTTTTTTTTGTTAAACCTA+AGG | + | chr1.2:9336979-9336998 | None:intergenic | 20.0% |
| !!! | GAATTGATACTTTAGAATTA+AGG | + | chr1.2:9335893-9335912 | None:intergenic | 20.0% |
| !!! | GGTGAACATTTTTTATTATT+TGG | - | chr1.2:9336117-9336136 | MS.gene015968:intron | 20.0% |
| !!! | TAAGCTTTTTTATCCAAATA+GGG | + | chr1.2:9335651-9335670 | None:intergenic | 20.0% |
| !!! | TATCATATAAGTTATTTCTG+TGG | - | chr1.2:9334277-9334296 | MS.gene015968:CDS | 20.0% |
| !!! | TGATAAAATTTTACCATTAG+TGG | + | chr1.2:9336890-9336909 | None:intergenic | 20.0% |
| !!! | TTAAGCTTTTTTATCCAAAT+AGG | + | chr1.2:9335652-9335671 | None:intergenic | 20.0% |
| !!! | TTTATTTTATGTTTATGGCT+TGG | - | chr1.2:9337416-9337435 | MS.gene015968:CDS | 20.0% |
| ! | AAACATTAGCATTACACTTT+GGG | + | chr1.2:9334363-9334382 | None:intergenic | 25.0% |
| ! | AAAGAATATGTAGAAAGTTG+GGG | + | chr1.2:9333691-9333710 | None:intergenic | 25.0% |
| ! | ATCAAAAGGATATACATGTT+AGG | + | chr1.2:9335505-9335524 | None:intergenic | 25.0% |
| ! | CAAAGAATATGTAGAAAGTT+GGG | + | chr1.2:9333692-9333711 | None:intergenic | 25.0% |
| ! | TAAACATTAGCATTACACTT+TGG | + | chr1.2:9334364-9334383 | None:intergenic | 25.0% |
| ! | TAAGAGTCTAAAGAATCAAA+AGG | + | chr1.2:9335519-9335538 | None:intergenic | 25.0% |
| ! | TAGGCATCTATATGTTTAAT+AGG | + | chr1.2:9336224-9336243 | None:intergenic | 25.0% |
| ! | TCTGAATATGAGGAAATTAT+TGG | - | chr1.2:9336848-9336867 | MS.gene015968:intron | 25.0% |
| ! | TTAATAGAGAAACAGGTAAA+TGG | - | chr1.2:9333748-9333767 | MS.gene015968:intron | 25.0% |
| ! | TTATTATGATGCAGAGTTAT+TGG | - | chr1.2:9337125-9337144 | MS.gene015968:intron | 25.0% |
| ! | TTTCTTGAAAATGTTTGATC+AGG | - | chr1.2:9337056-9337075 | MS.gene015968:intron | 25.0% |
| !! | AATTTACTTTCCATTTTGCT+AGG | + | chr1.2:9334584-9334603 | None:intergenic | 25.0% |
| !! | ACATGAAAACATTGATTGTA+TGG | + | chr1.2:9334970-9334989 | None:intergenic | 25.0% |
| !! | ACATTGATTGAAGAAATTTG+TGG | + | chr1.2:9334931-9334950 | None:intergenic | 25.0% |
| !! | ATTCTTTAGACTCTTATTTG+CGG | - | chr1.2:9335523-9335542 | MS.gene015968:intron | 25.0% |
| !! | CTATATTTTGCAATCTGTTA+TGG | - | chr1.2:9336704-9336723 | MS.gene015968:intron | 25.0% |
| !! | TGTTTTTCTTCTTGGAATAA+TGG | - | chr1.2:9335426-9335445 | MS.gene015968:intron | 25.0% |
| !! | TTGCAATCATTTTCTCTTTT+GGG | - | chr1.2:9334737-9334756 | MS.gene015968:CDS | 25.0% |
| !!! | AATGACTTTAGATGGATTTT+AGG | + | chr1.2:9335240-9335259 | None:intergenic | 25.0% |
| !!! | CACAATTGTTTTGATCAATA+GGG | - | chr1.2:9334628-9334647 | MS.gene015968:CDS | 25.0% |
| !!! | CATTTTCAAGAAATAAGTGA+AGG | + | chr1.2:9337049-9337068 | None:intergenic | 25.0% |
| !!! | TCACAATTGTTTTGATCAAT+AGG | - | chr1.2:9334627-9334646 | MS.gene015968:CDS | 25.0% |
| AAATTTGTGGACAAATAACG+CGG | + | chr1.2:9334918-9334937 | None:intergenic | 30.0% | |
| AAGCTATACTAAAGAGCTTA+TGG | - | chr1.2:9335759-9335778 | MS.gene015968:CDS | 30.0% | |
| AATCGTAGTAGCTTAACTTA+TGG | - | chr1.2:9337216-9337235 | MS.gene015968:intron | 30.0% | |
| ACCATTAGTGGTATATTATG+TGG | + | chr1.2:9336878-9336897 | None:intergenic | 30.0% | |
| AGAAAATGGCGATATTTAAC+AGG | - | chr1.2:9334793-9334812 | MS.gene015968:CDS | 30.0% | |
| AGACAATATGAGAGAACTTA+AGG | + | chr1.2:9335833-9335852 | None:intergenic | 30.0% | |
| ATTAACTCTAACAGGCAAAT+AGG | + | chr1.2:9336243-9336262 | None:intergenic | 30.0% | |
| ATTAGATGCTTCTGAATATG+AGG | - | chr1.2:9336838-9336857 | MS.gene015968:intron | 30.0% | |
| ATTATCCACTCAATATTTGG+TGG | - | chr1.2:9334062-9334081 | MS.gene015968:intron | 30.0% | |
| CAAGAAGAAAAACATCATAG+TGG | + | chr1.2:9335420-9335439 | None:intergenic | 30.0% | |
| CTAAACTCTTAGTATGCATA+GGG | + | chr1.2:9335591-9335610 | None:intergenic | 30.0% | |
| GATAGATAACTTGATGTTTG+TGG | - | chr1.2:9336491-9336510 | MS.gene015968:intron | 30.0% | |
| GATTATCACTAGGTTTACTA+GGG | - | chr1.2:9334466-9334485 | MS.gene015968:intron | 30.0% | |
| GCAAAGAATATGTAGAAAGT+TGG | + | chr1.2:9333693-9333712 | None:intergenic | 30.0% | |
| GGAATTATCCACTCAATATT+TGG | - | chr1.2:9334059-9334078 | MS.gene015968:intron | 30.0% | |
| TAAACTCTTAGTATGCATAG+GGG | + | chr1.2:9335590-9335609 | None:intergenic | 30.0% | |
| TCCACATAATATACCACTAA+TGG | - | chr1.2:9336874-9336893 | MS.gene015968:CDS | 30.0% | |
| TCGCAAATACTTCATATGAT+TGG | - | chr1.2:9333885-9333904 | MS.gene015968:CDS | 30.0% | |
| TGTGCAAAAACTGTATAGAA+TGG | + | chr1.2:9334138-9334157 | None:intergenic | 30.0% | |
| TTAACCTTCTAACTATACTG+AGG | - | chr1.2:9334222-9334241 | MS.gene015968:CDS | 30.0% | |
| TTATGGTCATATTTGTTCCA+GGG | - | chr1.2:9334388-9334407 | MS.gene015968:CDS | 30.0% | |
| TTTATGGTCATATTTGTTCC+AGG | - | chr1.2:9334387-9334406 | MS.gene015968:CDS | 30.0% | |
| ! | CACTATGATGTTTTTCTTCT+TGG | - | chr1.2:9335418-9335437 | MS.gene015968:intron | 30.0% |
| ! | CTTGCAATCATTTTCTCTTT+TGG | - | chr1.2:9334736-9334755 | MS.gene015968:CDS | 30.0% |
| ! | TAAGTAGAAGTGCAAGAAAA+TGG | - | chr1.2:9334779-9334798 | MS.gene015968:CDS | 30.0% |
| ! | TTGGGGATATTTTGCTTATA+TGG | - | chr1.2:9336355-9336374 | MS.gene015968:CDS | 30.0% |
| !! | AAGTCTTCCTTTGAAATCTT+CGG | + | chr1.2:9333613-9333632 | None:intergenic | 30.0% |
| !! | ATTTAGCACTGACATTGTTA+TGG | - | chr1.2:9333932-9333951 | MS.gene015968:CDS | 30.0% |
| !!! | CATTTGGTAATGTGTTTTAC+AGG | - | chr1.2:9333990-9334009 | MS.gene015968:intron | 30.0% |
| !!! | TCTACTCATTTTTAGTCCTT+AGG | - | chr1.2:9336960-9336979 | MS.gene015968:CDS | 30.0% |
| AACTATACTGAGGTTCTGTT+TGG | - | chr1.2:9334232-9334251 | MS.gene015968:CDS | 35.0% | |
| AATGTAGCTATTGTCTTGTG+TGG | + | chr1.2:9336668-9336687 | None:intergenic | 35.0% | |
| AGAACCTCAGTATAGTTAGA+AGG | + | chr1.2:9334229-9334248 | None:intergenic | 35.0% | |
| AGATTATGGTGTTCCAATGA+TGG | - | chr1.2:9335052-9335071 | MS.gene015968:CDS | 35.0% | |
| AGCAAAATATCCCCAAAGAA+CGG | + | chr1.2:9336351-9336370 | None:intergenic | 35.0% | |
| AGCCTGTTGAATGAAAAGAA+CGG | + | chr1.2:9334522-9334541 | None:intergenic | 35.0% | |
| ATAAATGCCCCAAAGATGTA+TGG | + | chr1.2:9335298-9335317 | None:intergenic | 35.0% | |
| ATAGCTATGAGAAGGAAGAA+AGG | + | chr1.2:9336770-9336789 | None:intergenic | 35.0% | |
| ATGAGAAGGAAGAAAGGTAA+TGG | + | chr1.2:9336764-9336783 | None:intergenic | 35.0% | |
| ATGAGAGAACTTAAGGAAAG+TGG | + | chr1.2:9335826-9335845 | None:intergenic | 35.0% | |
| ATGCATGTTCGATTATCACT+AGG | - | chr1.2:9334456-9334475 | MS.gene015968:intron | 35.0% | |
| ATGGTGTACATGATAACAGT+TGG | + | chr1.2:9334119-9334138 | None:intergenic | 35.0% | |
| CAATGAAGACAGACATATTC+AGG | - | chr1.2:9337242-9337261 | MS.gene015968:intron | 35.0% | |
| CGATTATCACTAGGTTTACT+AGG | - | chr1.2:9334465-9334484 | MS.gene015968:intron | 35.0% | |
| CTAAAAGTGATAAGGCGATA+AGG | + | chr1.2:9336298-9336317 | None:intergenic | 35.0% | |
| CTTTGCTCATTAACTCTAAC+AGG | + | chr1.2:9336251-9336270 | None:intergenic | 35.0% | |
| GAAATTTACAGTTGATCCGA+AGG | - | chr1.2:9335937-9335956 | MS.gene015968:CDS | 35.0% | |
| GAGCAACTTAATAGAGAAAC+AGG | - | chr1.2:9333741-9333760 | MS.gene015968:intron | 35.0% | |
| GATAATTCCACATATAGCTG+TGG | + | chr1.2:9334048-9334067 | None:intergenic | 35.0% | |
| GATGAGATGACAACTAATAG+GGG | - | chr1.2:9337147-9337166 | MS.gene015968:intron | 35.0% | |
| GCTAAACTCTTAGTATGCAT+AGG | + | chr1.2:9335592-9335611 | None:intergenic | 35.0% | |
| GGAAACAATATTCCACCAAT+AGG | + | chr1.2:9336743-9336762 | None:intergenic | 35.0% | |
| GGAAGCAACTCTGAATTATA+CGG | - | chr1.2:9335999-9336018 | MS.gene015968:CDS | 35.0% | |
| GGAATAACCGAAGATTTCAA+AGG | - | chr1.2:9333603-9333622 | MS.gene015968:intron | 35.0% | |
| GGATGAGATGACAACTAATA+GGG | - | chr1.2:9337146-9337165 | MS.gene015968:intron | 35.0% | |
| GGCATCCATTTCTATAAACA+CGG | + | chr1.2:9336036-9336055 | None:intergenic | 35.0% | |
| GTGTACTTGAGTTTATCTAC+CGG | + | chr1.2:9335871-9335890 | None:intergenic | 35.0% | |
| TAAAGAGTTGGAGACTTTGA+AGG | - | chr1.2:9336148-9336167 | MS.gene015968:intron | 35.0% | |
| TCTCTCTTATAGCTATGAGA+AGG | + | chr1.2:9336778-9336797 | None:intergenic | 35.0% | |
| TCTTCGGTTATTCCTCTAAA+TGG | + | chr1.2:9333597-9333616 | None:intergenic | 35.0% | |
| TGCACAAAAAGACCAGAATT+AGG | - | chr1.2:9334152-9334171 | MS.gene015968:intron | 35.0% | |
| TGGATGAGATGACAACTAAT+AGG | - | chr1.2:9337145-9337164 | MS.gene015968:intron | 35.0% | |
| TGTACTTGAGTTTATCTACC+GGG | + | chr1.2:9335870-9335889 | None:intergenic | 35.0% | |
| TGTCAAGCCAACAATACTTA+CGG | + | chr1.2:9336066-9336085 | None:intergenic | 35.0% | |
| TTCCAATGATGGTAGTATGT+TGG | - | chr1.2:9335063-9335082 | MS.gene015968:CDS | 35.0% | |
| TTGCAGTCAATGACTTTAGA+TGG | + | chr1.2:9335248-9335267 | None:intergenic | 35.0% | |
| TTTCATTCAACAGGCTATAG+AGG | - | chr1.2:9334526-9334545 | MS.gene015968:intron | 35.0% | |
| TTTCATTGGCGCTATACAAA+TGG | - | chr1.2:9334709-9334728 | MS.gene015968:CDS | 35.0% | |
| ! | AGGCTATAGAGGTATAGATA+TGG | - | chr1.2:9334537-9334556 | MS.gene015968:intron | 35.0% |
| ! | CAATCTGTTATGGATTGACA+CGG | - | chr1.2:9336714-9336733 | MS.gene015968:intron | 35.0% |
| ! | CTGTACTGGTGTTAGAATAT+TGG | - | chr1.2:9333665-9333684 | MS.gene015968:intron | 35.0% |
| ! | TACCGTTCTTTTCATTCAAC+AGG | - | chr1.2:9334517-9334536 | MS.gene015968:intron | 35.0% |
| ! | TAGTTTGCATCGAATAACCT+TGG | + | chr1.2:9336809-9336828 | None:intergenic | 35.0% |
| ! | TCGAGCTTCTACTATCATTT+TGG | + | chr1.2:9337197-9337216 | None:intergenic | 35.0% |
| ! | TTTATGGCTTGGACTTGTAT+AGG | - | chr1.2:9337427-9337446 | MS.gene015968:CDS | 35.0% |
| ! | TTTCCCAAAATTGATTCCCT+GGG | + | chr1.2:9336394-9336413 | None:intergenic | 35.0% |
| !! | TATCCTTTTGATGACAGGAA+CGG | + | chr1.2:9336321-9336340 | None:intergenic | 35.0% |
| !! | TTGATCTATAAGGGAGCATT+TGG | - | chr1.2:9333974-9333993 | MS.gene015968:intron | 35.0% |
| !! | TTGGTCTTAGGTTAAAGAGT+TGG | - | chr1.2:9336136-9336155 | MS.gene015968:intron | 35.0% |
| !!! | TTGGTAATGTGTTTTACAGG+TGG | - | chr1.2:9333993-9334012 | MS.gene015968:intron | 35.0% |
| AAAATATCCCCAAAGAACGG+AGG | + | chr1.2:9336348-9336367 | None:intergenic | 40.0% | |
| AAACCTGCTATCATAACTGC+TGG | + | chr1.2:9335322-9335341 | None:intergenic | 40.0% | |
| AAGCCAACAATACTTACGGT+AGG | + | chr1.2:9336062-9336081 | None:intergenic | 40.0% | |
| AAGGAATGCATTAGGCAACA+AGG | - | chr1.2:9335978-9335997 | MS.gene015968:CDS | 40.0% | |
| AAGTGAGTTCAAGATACCGA+AGG | - | chr1.2:9334657-9334676 | MS.gene015968:CDS | 40.0% | |
| ACATCATAGTGGTAAGCAGA+TGG | + | chr1.2:9335409-9335428 | None:intergenic | 40.0% | |
| ACTTACTTGTAGTGCCTTCT+GGG | + | chr1.2:9336440-9336459 | None:intergenic | 40.0% | |
| AGAGTTTAGCGACTCTTAGA+AGG | - | chr1.2:9335602-9335621 | MS.gene015968:intron | 40.0% | |
| AGGAACGGCTAAAAGTGATA+AGG | + | chr1.2:9336306-9336325 | None:intergenic | 40.0% | |
| AGGGTTGCAGAGGAATTATT+TGG | - | chr1.2:9334485-9334504 | MS.gene015968:intron | 40.0% | |
| ATATCCCGGTAGATTCTTCA+GGG | + | chr1.2:9337457-9337476 | None:intergenic | 40.0% | |
| ATTCCAGCAGTTATGATAGC+AGG | - | chr1.2:9335316-9335335 | MS.gene015968:intron | 40.0% | |
| CTATGTGCATACATGTCCAA+TGG | - | chr1.2:9336096-9336115 | MS.gene015968:intron | 40.0% | |
| GCAACTCCTACAATCAACAA+AGG | + | chr1.2:9334092-9334111 | None:intergenic | 40.0% | |
| GCTAACTCTTCCTAGCAAAA+TGG | - | chr1.2:9334571-9334590 | MS.gene015968:intron | 40.0% | |
| GGCTGCTTGGTAAGTATATT+TGG | - | chr1.2:9334196-9334215 | MS.gene015968:CDS | 40.0% | |
| GTACTTGAGTTTATCTACCG+GGG | + | chr1.2:9335869-9335888 | None:intergenic | 40.0% | |
| GTCCAACATACTACCATCAT+TGG | + | chr1.2:9335068-9335087 | None:intergenic | 40.0% | |
| GTTGACCACCAAATATTGAG+TGG | + | chr1.2:9334070-9334089 | None:intergenic | 40.0% | |
| GTTTACCCTGAAGAATCTAC+CGG | - | chr1.2:9337449-9337468 | MS.gene015968:CDS | 40.0% | |
| TAAGAGAGAGATTGCTTCCA+AGG | - | chr1.2:9336789-9336808 | MS.gene015968:intron | 40.0% | |
| TACCCTTGCCATACATCTTT+GGG | - | chr1.2:9335287-9335306 | MS.gene015968:intron | 40.0% | |
| TACTTACTTGTAGTGCCTTC+TGG | + | chr1.2:9336441-9336460 | None:intergenic | 40.0% | |
| TACTTGAGTTTATCTACCGG+GGG | + | chr1.2:9335868-9335887 | None:intergenic | 40.0% | |
| TCGGTATCTTGAACTCACTT+AGG | + | chr1.2:9334657-9334676 | None:intergenic | 40.0% | |
| TCTTGCACTTCTACTTACCA+TGG | + | chr1.2:9334776-9334795 | None:intergenic | 40.0% | |
| TGCTCTCCAAAAGCAATAAC+AGG | + | chr1.2:9333726-9333745 | None:intergenic | 40.0% | |
| TGGATTTGTGCAATCTGTAC+TGG | - | chr1.2:9333651-9333670 | MS.gene015968:intron | 40.0% | |
| TTGACATCCACAGCTATATG+TGG | - | chr1.2:9334038-9334057 | MS.gene015968:intron | 40.0% | |
| TTTACAGTTGATCCGAAGGA+AGG | - | chr1.2:9335941-9335960 | MS.gene015968:CDS | 40.0% | |
| TTTACCCTGAAGAATCTACC+GGG | - | chr1.2:9337450-9337469 | MS.gene015968:CDS | 40.0% | |
| TTTGTTCCAGGGTTTGTGTT+TGG | - | chr1.2:9334399-9334418 | MS.gene015968:CDS | 40.0% | |
| ! | AACAAGGGATTTTCAGCCTT+CGG | + | chr1.2:9334676-9334695 | None:intergenic | 40.0% |
| ! | ACTCTTATTTGCGGCATTCT+TGG | - | chr1.2:9335532-9335551 | MS.gene015968:intron | 40.0% |
| ! | CAGGTAAGCACCATATTTTG+CGG | - | chr1.2:9335625-9335644 | MS.gene015968:CDS | 40.0% |
| ! | CTTTCCCAAAATTGATTCCC+TGG | + | chr1.2:9336395-9336414 | None:intergenic | 40.0% |
| ! | GCACTTCCTGTTATTGCTTT+TGG | - | chr1.2:9333717-9333736 | MS.gene015968:intron | 40.0% |
| ! | GGTAAGCAGATGGTTTTTGA+AGG | + | chr1.2:9335399-9335418 | None:intergenic | 40.0% |
| ! | GGTCAACCTTTGTTGATTGT+AGG | - | chr1.2:9334083-9334102 | MS.gene015968:intron | 40.0% |
| ! | TCTCCCAGGGAATCAATTTT+GGG | - | chr1.2:9336388-9336407 | MS.gene015968:CDS | 40.0% |
| ! | TGTCTTTTCGCGCAGAATTT+TGG | - | chr1.2:9336610-9336629 | MS.gene015968:CDS | 40.0% |
| ! | TTTTCGCGCAGAATTTTGGA+AGG | - | chr1.2:9336614-9336633 | MS.gene015968:CDS | 40.0% |
| !! | ATTAGGTGCCAAGCTGTTTT+TGG | - | chr1.2:9334169-9334188 | MS.gene015968:intron | 40.0% |
| !! | CAGGGAATCAATTTTGGGAA+AGG | - | chr1.2:9336393-9336412 | MS.gene015968:CDS | 40.0% |
| !! | GTAGGTATCCTTTTGATGAC+AGG | + | chr1.2:9336326-9336345 | None:intergenic | 40.0% |
| !! | TGGTACTGACTCTACAAATG+AGG | + | chr1.2:9336648-9336667 | None:intergenic | 40.0% |
| AACAATACTTACGGTAGGCG+CGG | + | chr1.2:9336057-9336076 | None:intergenic | 45.0% | |
| AACAGCTTGGCACCTAATTC+TGG | + | chr1.2:9334167-9334186 | None:intergenic | 45.0% | |
| AACCTGAATCTCTCTACCAC+TGG | - | chr1.2:9335162-9335181 | MS.gene015968:intron | 45.0% | |
| ACACCAGTTGGAACTTTGCT+CGG | + | chr1.2:9335110-9335129 | None:intergenic | 45.0% | |
| ACCCTTGCCATACATCTTTG+GGG | - | chr1.2:9335288-9335307 | MS.gene015968:intron | 45.0% | |
| AGAGTGCGAAGGAATGCATT+AGG | - | chr1.2:9335970-9335989 | MS.gene015968:CDS | 45.0% | |
| AGTGGACAAAGCAACCTTCT+AGG | + | chr1.2:9335134-9335153 | None:intergenic | 45.0% | |
| AGTTGGAACTTTGCTCGGTA+TGG | + | chr1.2:9335105-9335124 | None:intergenic | 45.0% | |
| ATACCGAGCAAAGTTCCAAC+TGG | - | chr1.2:9335104-9335123 | MS.gene015968:intron | 45.0% | |
| ATACCTACCTCCGTTCTTTG+GGG | - | chr1.2:9336338-9336357 | MS.gene015968:CDS | 45.0% | |
| ATTCAATCAGGGTGCATACG+AGG | - | chr1.2:9335020-9335039 | MS.gene015968:CDS | 45.0% | |
| ATTGAATGCCAAAGGGAGAC+AGG | + | chr1.2:9335007-9335026 | None:intergenic | 45.0% | |
| CACCCTGATTGAATGCCAAA+GGG | + | chr1.2:9335014-9335033 | None:intergenic | 45.0% | |
| CATATCCCGGTAGATTCTTC+AGG | + | chr1.2:9337458-9337477 | None:intergenic | 45.0% | |
| CCAAATAGGGCCGCAAAATA+TGG | + | chr1.2:9335638-9335657 | None:intergenic | 45.0% | |
| CTACCACTGGACTGTAGTTA+AGG | - | chr1.2:9335175-9335194 | MS.gene015968:intron | 45.0% | |
| CTCCCTTTGGCATTCAATCA+GGG | - | chr1.2:9335009-9335028 | MS.gene015968:CDS | 45.0% | |
| CTTACTTGTAGTGCCTTCTG+GGG | + | chr1.2:9336439-9336458 | None:intergenic | 45.0% | |
| GAAGGACTCCATTTACTGGA+GGG | + | chr1.2:9335561-9335580 | None:intergenic | 45.0% | |
| GATACCTACCTCCGTTCTTT+GGG | - | chr1.2:9336337-9336356 | MS.gene015968:CDS | 45.0% | |
| GCGAGCCGTGTTTATAGAAA+TGG | - | chr1.2:9336028-9336047 | MS.gene015968:intron | 45.0% | |
| GGATTGACACGGATACCTAT+TGG | - | chr1.2:9336725-9336744 | MS.gene015968:intron | 45.0% | |
| GGCTGAAAATCCCTTGTTAG+AGG | - | chr1.2:9334678-9334697 | MS.gene015968:CDS | 45.0% | |
| GTACCCTTGCCATACATCTT+TGG | - | chr1.2:9335286-9335305 | MS.gene015968:intron | 45.0% | |
| GTACCTTAACTACAGTCCAG+TGG | + | chr1.2:9335181-9335200 | None:intergenic | 45.0% | |
| TAACTTCTCCTGTCTCCCTT+TGG | - | chr1.2:9334996-9335015 | MS.gene015968:intron | 45.0% | |
| TAGCCGTTCCTGTCATCAAA+AGG | - | chr1.2:9336315-9336334 | MS.gene015968:CDS | 45.0% | |
| TAGGTTTACTAGGGTTGCAG+AGG | - | chr1.2:9334475-9334494 | MS.gene015968:intron | 45.0% | |
| TCATAGCGTAGCTTCCAAGA+TGG | - | chr1.2:9335354-9335373 | MS.gene015968:intron | 45.0% | |
| TCTCCCTTTGGCATTCAATC+AGG | - | chr1.2:9335008-9335027 | MS.gene015968:CDS | 45.0% | |
| TGACTGCAACTGCAGGATAT+GGG | - | chr1.2:9335259-9335278 | MS.gene015968:intron | 45.0% | |
| TGAGGAAGGACTCCATTTAC+TGG | + | chr1.2:9335565-9335584 | None:intergenic | 45.0% | |
| TGATGTCCAAACACAAACCC+TGG | + | chr1.2:9334408-9334427 | None:intergenic | 45.0% | |
| TTACTTGTAGTGCCTTCTGG+GGG | + | chr1.2:9336438-9336457 | None:intergenic | 45.0% | |
| TTAGTATGCATAGGGGACTG+AGG | + | chr1.2:9335583-9335602 | None:intergenic | 45.0% | |
| TTCCAACTGGTGTTCCTAGA+AGG | - | chr1.2:9335117-9335136 | MS.gene015968:intron | 45.0% | |
| TTCCAAGATGGCTCAACAGA+AGG | - | chr1.2:9335366-9335385 | MS.gene015968:intron | 45.0% | |
| TTCCTTCTGTTGAGCCATCT+TGG | + | chr1.2:9335371-9335390 | None:intergenic | 45.0% | |
| TTGACACGGATACCTATTGG+TGG | - | chr1.2:9336728-9336747 | MS.gene015968:intron | 45.0% | |
| TTGACTGCAACTGCAGGATA+TGG | - | chr1.2:9335258-9335277 | MS.gene015968:intron | 45.0% | |
| TTTAGCGACTCTTAGAAGGC+AGG | - | chr1.2:9335606-9335625 | MS.gene015968:intron | 45.0% | |
| ! | AACCTTCTAGGAACACCAGT+TGG | + | chr1.2:9335122-9335141 | None:intergenic | 45.0% |
| ! | AAGTCATTGACTGCAACTGC+AGG | - | chr1.2:9335252-9335271 | MS.gene015968:intron | 45.0% |
| ! | AGAGTTGGAGACTTTGAAGG+AGG | - | chr1.2:9336151-9336170 | MS.gene015968:intron | 45.0% |
| ! | ATGGCAATTGATAGTCTCCC+AGG | - | chr1.2:9336374-9336393 | MS.gene015968:CDS | 45.0% |
| ! | CCATATTTTGCGGCCCTATT+TGG | - | chr1.2:9335635-9335654 | MS.gene015968:CDS | 45.0% |
| ! | GTCTCCCAGGGAATCAATTT+TGG | - | chr1.2:9336387-9336406 | MS.gene015968:CDS | 45.0% |
| ! | GTTGCTTTGTCCACTTCCTT+GGG | - | chr1.2:9335139-9335158 | MS.gene015968:intron | 45.0% |
| ! | TAGAGAGATTCAGGTTCCCA+AGG | + | chr1.2:9335158-9335177 | None:intergenic | 45.0% |
| ! | TGGCAATTGATAGTCTCCCA+GGG | - | chr1.2:9336375-9336394 | MS.gene015968:CDS | 45.0% |
| ! | TTCTTTTCATCACCCCCAGA+AGG | - | chr1.2:9336423-9336442 | MS.gene015968:intron | 45.0% |
| !!! | GTGTGTTTTTAGTCCCTCGT+CGG | - | chr1.2:9336998-9337017 | MS.gene015968:CDS | 45.0% |
| !!! | TGCCAAGCTGTTTTTGGCTT+GGG | - | chr1.2:9334175-9334194 | MS.gene015968:CDS | 45.0% |
| !!! | TGGGTTACTTTTCACTGCCA+TGG | - | chr1.2:9334756-9334775 | MS.gene015968:CDS | 45.0% |
| ACAGTTGATCCGAAGGAAGG+TGG | - | chr1.2:9335944-9335963 | MS.gene015968:CDS | 50.0% | |
| AGCCCAAGCCAAAAACAGCT+TGG | + | chr1.2:9334180-9334199 | None:intergenic | 50.0% | |
| CACTCTTCACCACCTTCCTT+CGG | + | chr1.2:9335956-9335975 | None:intergenic | 50.0% | |
| CTTGGTCTCCCTCCAGTAAA+TGG | - | chr1.2:9335550-9335569 | MS.gene015968:intron | 50.0% | |
| GCAACTGCAGGATATGGGAA+AGG | - | chr1.2:9335264-9335283 | MS.gene015968:intron | 50.0% | |
| GCACCCTGATTGAATGCCAA+AGG | + | chr1.2:9335015-9335034 | None:intergenic | 50.0% | |
| GCCCCAAAGATGTATGGCAA+GGG | + | chr1.2:9335292-9335311 | None:intergenic | 50.0% | |
| GGAAGGACTCCATTTACTGG+AGG | + | chr1.2:9335562-9335581 | None:intergenic | 50.0% | |
| GGATACCTACCTCCGTTCTT+TGG | - | chr1.2:9336336-9336355 | MS.gene015968:CDS | 50.0% | |
| GTCCAGTGGTAGAGAGATTC+AGG | + | chr1.2:9335167-9335186 | None:intergenic | 50.0% | |
| GTCTCACAAGTGATTACCCC+CGG | - | chr1.2:9335849-9335868 | MS.gene015968:intron | 50.0% | |
| TATCCCCAAAGAACGGAGGT+AGG | + | chr1.2:9336344-9336363 | None:intergenic | 50.0% | |
| TATGCATAGGGGACTGAGGA+AGG | + | chr1.2:9335579-9335598 | None:intergenic | 50.0% | |
| TGCCCCAAAGATGTATGGCA+AGG | + | chr1.2:9335293-9335312 | None:intergenic | 50.0% | |
| ! | ATGCTTTTAGGCTCCGACGA+GGG | + | chr1.2:9337014-9337033 | None:intergenic | 50.0% |
| ! | CGAGGTGTCATCGCAGATTA+TGG | - | chr1.2:9335038-9335057 | MS.gene015968:CDS | 50.0% |
| ! | GATTCAGGTTCCCAAGGAAG+TGG | + | chr1.2:9335152-9335171 | None:intergenic | 50.0% |
| ! | GCGCCTACCGTAAGTATTGT+TGG | - | chr1.2:9336056-9336075 | MS.gene015968:intron | 50.0% |
| ! | GGTTGCTTTGTCCACTTCCT+TGG | - | chr1.2:9335138-9335157 | MS.gene015968:intron | 50.0% |
| !!! | GTGCCAAGCTGTTTTTGGCT+TGG | - | chr1.2:9334174-9334193 | MS.gene015968:CDS | 50.0% |
| !!! | TGTTTTTGGCTTGGGCTGCT+TGG | - | chr1.2:9334183-9334202 | MS.gene015968:CDS | 50.0% |
| ! | CATGCTTTTAGGCTCCGACG+AGG | + | chr1.2:9337015-9337034 | None:intergenic | 55.0% |
| ! | GAAGGTGGTGAAGAGTGCGA+AGG | - | chr1.2:9335959-9335978 | MS.gene015968:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 9333588 | 9337478 | 9333588 | ID=MS.gene015968 |
| chr1.2 | mRNA | 9333588 | 9337478 | 9333588 | ID=MS.gene015968.t1;Parent=MS.gene015968 |
| chr1.2 | exon | 9337304 | 9337478 | 9337304 | ID=MS.gene015968.t1.exon1;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9337304 | 9337478 | 9337304 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9336862 | 9337054 | 9336862 | ID=MS.gene015968.t1.exon2;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9336862 | 9337054 | 9336862 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9336519 | 9336657 | 9336519 | ID=MS.gene015968.t1.exon3;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9336519 | 9336657 | 9336519 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9336252 | 9336417 | 9336252 | ID=MS.gene015968.t1.exon4;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9336252 | 9336417 | 9336252 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9335870 | 9336036 | 9335870 | ID=MS.gene015968.t1.exon5;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9335870 | 9336036 | 9335870 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9335619 | 9335792 | 9335619 | ID=MS.gene015968.t1.exon6;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9335619 | 9335792 | 9335619 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9335439 | 9335534 | 9335439 | ID=MS.gene015968.t1.exon7;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9335439 | 9335534 | 9335439 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9335002 | 9335118 | 9335002 | ID=MS.gene015968.t1.exon8;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9335002 | 9335118 | 9335002 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9334613 | 9334920 | 9334613 | ID=MS.gene015968.t1.exon9;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9334613 | 9334920 | 9334613 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9334171 | 9334441 | 9334171 | ID=MS.gene015968.t1.exon10;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9334171 | 9334441 | 9334171 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9333803 | 9333988 | 9333803 | ID=MS.gene015968.t1.exon11;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9333803 | 9333988 | 9333803 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| chr1.2 | exon | 9333588 | 9333617 | 9333588 | ID=MS.gene015968.t1.exon12;Parent=MS.gene015968.t1 |
| chr1.2 | CDS | 9333588 | 9333617 | 9333588 | ID=cds.MS.gene015968.t1;Parent=MS.gene015968.t1 |
| Gene Sequence |
| Protein sequence |
