Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018541.t1 | KEH24003.1 | 95.2 | 352 | 16 | 1 | 1 | 352 | 1 | 351 | 2.20E-160 | 575.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018541.t1 | Q9LS48 | 41.4 | 99 | 58 | 0 | 241 | 339 | 212 | 310 | 2.6e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018541.t1 | A0A072U4F2 | 95.2 | 352 | 16 | 1 | 1 | 352 | 1 | 351 | 1.6e-160 | 575.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018541 | MS.gene31030 | PPI |
| MS.gene018541 | MS.gene08394 | PPI |
| MS.gene018541 | MS.gene023230 | PPI |
| MS.gene018541 | MS.gene049351 | PPI |
| MS.gene018541 | MS.gene028233 | PPI |
| MS.gene018541 | MS.gene013374 | PPI |
| MS.gene018541 | MS.gene35220 | PPI |
| MS.gene018541 | MS.gene06470 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018541.t1 | MTR_7g100328 | 98.295 | 352 | 5 | 1 | 1 | 352 | 1 | 351 | 0.0 | 707 |
| MS.gene018541.t1 | MTR_1g067600 | 46.286 | 350 | 157 | 9 | 1 | 332 | 1 | 337 | 1.34e-81 | 253 |
| MS.gene018541.t1 | MTR_3g095070 | 36.458 | 288 | 154 | 7 | 68 | 346 | 57 | 324 | 3.87e-49 | 168 |
| MS.gene018541.t1 | MTR_8g101290 | 29.536 | 237 | 135 | 10 | 58 | 284 | 80 | 294 | 6.02e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018541.t1 | AT3G53560 | 63.043 | 230 | 80 | 2 | 119 | 348 | 108 | 332 | 3.80e-96 | 289 |
| MS.gene018541.t1 | AT2G37400 | 54.745 | 274 | 112 | 3 | 83 | 348 | 63 | 332 | 4.85e-96 | 289 |
| MS.gene018541.t1 | AT3G53560 | 63.043 | 230 | 80 | 2 | 119 | 348 | 156 | 380 | 7.85e-96 | 290 |
| MS.gene018541.t1 | AT5G02590 | 43.988 | 341 | 141 | 7 | 11 | 337 | 15 | 319 | 2.40e-85 | 261 |
| MS.gene018541.t1 | AT3G09490 | 44.279 | 201 | 108 | 1 | 127 | 327 | 98 | 294 | 2.45e-52 | 176 |
| MS.gene018541.t1 | AT4G39470 | 32.927 | 328 | 178 | 8 | 6 | 331 | 29 | 316 | 6.58e-52 | 176 |
| MS.gene018541.t1 | AT3G18420 | 33.110 | 299 | 166 | 7 | 49 | 339 | 38 | 310 | 5.11e-46 | 159 |
Find 94 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGGAGTAGGGTTATTT+TGG | 0.204717 | 7.4:+10023675 | None:intergenic |
| GTTATTGGTTGCTCAGATTA+AGG | 0.260166 | 7.4:-10023090 | MS.gene018541:CDS |
| AGAAGAAGGTTTCGGATGTT+AGG | 0.266026 | 7.4:-10023121 | MS.gene018541:CDS |
| AAGGAGAGGGAGGGTGATAA+GGG | 0.280767 | 7.4:+10023800 | None:intergenic |
| CTTCGAGTTGAAGCATTTCA+TGG | 0.282568 | 7.4:-10023242 | MS.gene018541:CDS |
| TTTGAAACGCAGGGTCGTTT+TGG | 0.296089 | 7.4:+10023702 | None:intergenic |
| TCATCAAAATACTCTTTATA+AGG | 0.300941 | 7.4:+10022894 | None:intergenic |
| AGAGGCGCTTAAAGCTTATC+AGG | 0.305548 | 7.4:-10023048 | MS.gene018541:CDS |
| ACAATTTCTTAGCAGATTCA+TGG | 0.328436 | 7.4:+10023291 | None:intergenic |
| AAAGGAGAGGGAGGGTGATA+AGG | 0.331906 | 7.4:+10023799 | None:intergenic |
| CGTAGAGCTTCAGCATCATT+TGG | 0.335421 | 7.4:+10023449 | None:intergenic |
| TGGAAAGGGTTTGGTGGAGT+AGG | 0.342617 | 7.4:+10023665 | None:intergenic |
| TCTTTATAAGGATGATTCTT+CGG | 0.343610 | 7.4:+10022906 | None:intergenic |
| GCTTAAAGCTTATCAGGATT+TGG | 0.343744 | 7.4:-10023042 | MS.gene018541:CDS |
| TGAAGCTCTACGTGCTTTAA+TGG | 0.348747 | 7.4:-10023438 | MS.gene018541:CDS |
| CTTTATAAGGATGATTCTTC+GGG | 0.354190 | 7.4:+10022907 | None:intergenic |
| GGGAGGAATTGTGGTGGTGG+TGG | 0.373494 | 7.4:+10023767 | None:intergenic |
| GGAGGGAGGAATTGTGGTGG+TGG | 0.386933 | 7.4:+10023764 | None:intergenic |
| GGAATTGTGGTGGTGGTGGA+TGG | 0.389269 | 7.4:+10023771 | None:intergenic |
| AGAAGAGAGAGGATAGGGTT+TGG | 0.397563 | 7.4:+10023645 | None:intergenic |
| TGGACTTGTGATGGCGAGTT+CGG | 0.402706 | 7.4:-10023222 | MS.gene018541:CDS |
| CAGGTTCAATTTCAATCAAA+CGG | 0.412642 | 7.4:+10023366 | None:intergenic |
| GGAAAGGGTTTGGTGGAGTA+GGG | 0.413750 | 7.4:+10023666 | None:intergenic |
| GAGAGGATAGGGTTTGGAAA+GGG | 0.419757 | 7.4:+10023651 | None:intergenic |
| AATTGCCACTCCATTTCTTC+AGG | 0.420552 | 7.4:+10023347 | None:intergenic |
| TGAAATTGAACCTGAAGAAA+TGG | 0.424458 | 7.4:-10023357 | MS.gene018541:CDS |
| TGGGAAGATGAGGATTTGAT+TGG | 0.425612 | 7.4:+10023722 | None:intergenic |
| GATAGGGTTTGGAAAGGGTT+TGG | 0.426503 | 7.4:+10023656 | None:intergenic |
| GAAGAAGGTTTCGGATGTTA+GGG | 0.426707 | 7.4:-10023120 | MS.gene018541:CDS |
| GAGGTTGGGTATGGAATTCA+TGG | 0.443970 | 7.4:+10023865 | None:intergenic |
| GAGGTTGGAGTGACGGAGGT+TGG | 0.447670 | 7.4:+10023850 | None:intergenic |
| GAGGGTGATAAGGGGAATGA+TGG | 0.448818 | 7.4:+10023809 | None:intergenic |
| CAAGAAACAGAAGAAGGTTT+CGG | 0.449162 | 7.4:-10023129 | MS.gene018541:CDS |
| GAGAGAGTGGCGGCGATGAC+AGG | 0.450025 | 7.4:+10023551 | None:intergenic |
| ATCTGCTAAGAAATTGTTTG+AGG | 0.450418 | 7.4:-10023285 | MS.gene018541:CDS |
| AGGTTGGAGTGACGGAGGTT+GGG | 0.454356 | 7.4:+10023851 | None:intergenic |
| AGAGAGGATAGGGTTTGGAA+AGG | 0.455764 | 7.4:+10023650 | None:intergenic |
| CTTCCCTCTCGAATTTCTGC+GGG | 0.460361 | 7.4:+10022847 | None:intergenic |
| ATGCATGTGGTTTCAACGAC+GGG | 0.470057 | 7.4:+10023620 | None:intergenic |
| GAATTGTGGTGGTGGTGGAT+GGG | 0.471518 | 7.4:+10023772 | None:intergenic |
| GGAGTGACGGAGGTTGGGTA+TGG | 0.475825 | 7.4:+10023856 | None:intergenic |
| TTCATCTTTCTTTCTAAGCA+AGG | 0.478456 | 7.4:+10022965 | None:intergenic |
| GAGGATGGAGGGAGGAATTG+TGG | 0.483001 | 7.4:+10023758 | None:intergenic |
| AGGGTTTGGAAAGGGTTTGG+TGG | 0.514075 | 7.4:+10023659 | None:intergenic |
| AATGGAGTGGCAATTGTTGA+AGG | 0.525932 | 7.4:-10023339 | MS.gene018541:CDS |
| CTCTTTAACAATCCTTTCAA+CGG | 0.526642 | 7.4:+10023176 | None:intergenic |
| GTTGTGATTGAGTGAGAGGT+TGG | 0.527474 | 7.4:+10023835 | None:intergenic |
| GAAGATGAGGATTTGATTGG+TGG | 0.529899 | 7.4:+10023725 | None:intergenic |
| AGAGGGAAGAAGCTGGTGCT+AGG | 0.536510 | 7.4:-10022833 | MS.gene018541:CDS |
| GGTTGCTCAGATTAAGGTGA+TGG | 0.536546 | 7.4:-10023084 | MS.gene018541:CDS |
| ATGGGAACGAAAGGAGAGGG+AGG | 0.539050 | 7.4:+10023790 | None:intergenic |
| CATGAAGAAGAAAGCGGTGG+CGG | 0.540016 | 7.4:+10023589 | None:intergenic |
| CTCTCCTCCGACCACCGTAA+CGG | 0.540098 | 7.4:-10023531 | MS.gene018541:CDS |
| TGAGTGAGAGGTTGGAGTGA+CGG | 0.540138 | 7.4:+10023843 | None:intergenic |
| GGTGGAAGCTTGAACGAGGA+TGG | 0.546675 | 7.4:+10023743 | None:intergenic |
| AGGAGAGGGAGGGTGATAAG+GGG | 0.549745 | 7.4:+10023801 | None:intergenic |
| TCTTCCCTCTCGAATTTCTG+CGG | 0.553717 | 7.4:+10022846 | None:intergenic |
| CAATCTGATGAACCGTTGAA+AGG | 0.557133 | 7.4:-10023188 | MS.gene018541:CDS |
| TGGATGGGAACGAAAGGAGA+GGG | 0.557548 | 7.4:+10023787 | None:intergenic |
| TGGTGGTGGATGGGAACGAA+AGG | 0.558966 | 7.4:+10023781 | None:intergenic |
| GACGGTTGTGATTGAGTGAG+AGG | 0.560939 | 7.4:+10023831 | None:intergenic |
| ATAATACCCTGACACAGATA+AGG | 0.564227 | 7.4:+10022993 | None:intergenic |
| GAAGCTTGAACGAGGATGGA+GGG | 0.567512 | 7.4:+10023747 | None:intergenic |
| GTGGATGGGAACGAAAGGAG+AGG | 0.569834 | 7.4:+10023786 | None:intergenic |
| AACGGAAAATGCTACGACGG+AGG | 0.575798 | 7.4:-10023513 | MS.gene018541:CDS |
| GCTCAGATTAAGGTGATGGA+AGG | 0.579155 | 7.4:-10023080 | MS.gene018541:CDS |
| GTGATAAGGGGAATGATGGA+CGG | 0.584735 | 7.4:+10023813 | None:intergenic |
| AGATAAGGCCTAAAATCTCT+CGG | 0.585108 | 7.4:+10023008 | None:intergenic |
| GGAAGCTTGAACGAGGATGG+AGG | 0.588597 | 7.4:+10023746 | None:intergenic |
| TTTAGGCCTTATCTGTGTCA+GGG | 0.591449 | 7.4:-10022999 | MS.gene018541:CDS |
| CGGCGATGACAGGAGTGTGA+TGG | 0.592621 | 7.4:+10023561 | None:intergenic |
| AGCATTTCATGGACTTGTGA+TGG | 0.594852 | 7.4:-10023231 | MS.gene018541:CDS |
| GTTGTGCAAGAAACAGAAGA+AGG | 0.595826 | 7.4:-10023135 | MS.gene018541:CDS |
| AAATTCGAGAGGGAAGAAGC+TGG | 0.597290 | 7.4:-10022840 | MS.gene018541:CDS |
| GTGAGAGGTTGGAGTGACGG+AGG | 0.609583 | 7.4:+10023846 | None:intergenic |
| TGGGAACGAAAGGAGAGGGA+GGG | 0.616150 | 7.4:+10023791 | None:intergenic |
| GCTTAGAAAGAAAGATGAAG+CGG | 0.617032 | 7.4:-10022961 | MS.gene018541:CDS |
| CTCAGATTAAGGTGATGGAA+GGG | 0.621477 | 7.4:-10023079 | MS.gene018541:CDS |
| TGAAATGCTTCAACTCGAAG+CGG | 0.637606 | 7.4:+10023245 | None:intergenic |
| TTGAACCTGAAGAAATGGAG+TGG | 0.639379 | 7.4:-10023352 | MS.gene018541:CDS |
| GCTTGAACGAGGATGGAGGG+AGG | 0.643989 | 7.4:+10023750 | None:intergenic |
| GGTGGTCGGAGGAGAGAGAG+TGG | 0.645390 | 7.4:+10023538 | None:intergenic |
| GATGCATGTGGTTTCAACGA+CGG | 0.656165 | 7.4:+10023619 | None:intergenic |
| AGCTCTACGTGCTTTAATGG+AGG | 0.672443 | 7.4:-10023435 | MS.gene018541:CDS |
| GGCGGCGATAACGATGCATG+TGG | 0.673470 | 7.4:+10023607 | None:intergenic |
| CGTAACGGAAAATGCTACGA+CGG | 0.678661 | 7.4:-10023516 | MS.gene018541:CDS |
| TGCATGTGGTTTCAACGACG+GGG | 0.681809 | 7.4:+10023621 | None:intergenic |
| TTTCCCGCAGAAATTCGAGA+GGG | 0.688033 | 7.4:-10022850 | MS.gene018541:CDS |
| GATGGAGGGAGGAATTGTGG+TGG | 0.694212 | 7.4:+10023761 | None:intergenic |
| GATTGGTGGAAGCTTGAACG+AGG | 0.699317 | 7.4:+10023739 | None:intergenic |
| GAAACGCATGAAGAAGAAAG+CGG | 0.702638 | 7.4:+10023583 | None:intergenic |
| GCATGTGGTTTCAACGACGG+GGG | 0.706740 | 7.4:+10023622 | None:intergenic |
| ACGCATGAAGAAGAAAGCGG+TGG | 0.712874 | 7.4:+10023586 | None:intergenic |
| GGTCGGAGGAGAGAGAGTGG+CGG | 0.713800 | 7.4:+10023541 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATCAAAATACTCTTTATA+AGG | + | chr7.4:10023799-10023818 | None:intergenic | 20.0% |
| !!! | TATTTTGATGATAACATGAA+TGG | - | chr7.4:10023808-10023827 | MS.gene018541:CDS | 20.0% |
| ! | TCTTTATAAGGATGATTCTT+CGG | + | chr7.4:10023787-10023806 | None:intergenic | 25.0% |
| AAAGAGAGTTGAAAAAGCAA+TGG | - | chr7.4:10023531-10023550 | MS.gene018541:CDS | 30.0% | |
| ACAATTTCTTAGCAGATTCA+TGG | + | chr7.4:10023402-10023421 | None:intergenic | 30.0% | |
| AGAAAAATTGATGAAGCGAT+TGG | - | chr7.4:10023292-10023311 | MS.gene018541:CDS | 30.0% | |
| ATCTGCTAAGAAATTGTTTG+AGG | - | chr7.4:10023405-10023424 | MS.gene018541:CDS | 30.0% | |
| CAGGTTCAATTTCAATCAAA+CGG | + | chr7.4:10023327-10023346 | None:intergenic | 30.0% | |
| CTCTTTAACAATCCTTTCAA+CGG | + | chr7.4:10023517-10023536 | None:intergenic | 30.0% | |
| CTTTATAAGGATGATTCTTC+GGG | + | chr7.4:10023786-10023805 | None:intergenic | 30.0% | |
| TGAAATTGAACCTGAAGAAA+TGG | - | chr7.4:10023333-10023352 | MS.gene018541:CDS | 30.0% | |
| TTCATCTTTCTTTCTAAGCA+AGG | + | chr7.4:10023728-10023747 | None:intergenic | 30.0% | |
| ! | TTCAGCATCATTTGGATTTT+CGG | + | chr7.4:10023236-10023255 | None:intergenic | 30.0% |
| !!! | TGTTAGGGATTTTAGGTTAT+TGG | - | chr7.4:10023585-10023604 | MS.gene018541:CDS | 30.0% |
| AGATAAGGCCTAAAATCTCT+CGG | + | chr7.4:10023685-10023704 | None:intergenic | 35.0% | |
| ATAATACCCTGACACAGATA+AGG | + | chr7.4:10023700-10023719 | None:intergenic | 35.0% | |
| CAAGAAACAGAAGAAGGTTT+CGG | - | chr7.4:10023561-10023580 | MS.gene018541:CDS | 35.0% | |
| GCTTAAAGCTTATCAGGATT+TGG | - | chr7.4:10023648-10023667 | MS.gene018541:CDS | 35.0% | |
| GCTTAGAAAGAAAGATGAAG+CGG | - | chr7.4:10023729-10023748 | MS.gene018541:CDS | 35.0% | |
| ! | AAGAAGAACCGAGAGATTTT+AGG | - | chr7.4:10023674-10023693 | MS.gene018541:CDS | 35.0% |
| ! | GTTATTGGTTGCTCAGATTA+AGG | - | chr7.4:10023600-10023619 | MS.gene018541:CDS | 35.0% |
| ! | TTTCGGATGTTAGGGATTTT+AGG | - | chr7.4:10023578-10023597 | MS.gene018541:CDS | 35.0% |
| AATGGAGTGGCAATTGTTGA+AGG | - | chr7.4:10023351-10023370 | MS.gene018541:CDS | 40.0% | |
| AATTGCCACTCCATTTCTTC+AGG | + | chr7.4:10023346-10023365 | None:intergenic | 40.0% | |
| AGAAGAAGGTTTCGGATGTT+AGG | - | chr7.4:10023569-10023588 | MS.gene018541:CDS | 40.0% | |
| AGCATTTCATGGACTTGTGA+TGG | - | chr7.4:10023459-10023478 | MS.gene018541:CDS | 40.0% | |
| CAATCTGATGAACCGTTGAA+AGG | - | chr7.4:10023502-10023521 | MS.gene018541:CDS | 40.0% | |
| GAAACGCATGAAGAAGAAAG+CGG | + | chr7.4:10023110-10023129 | None:intergenic | 40.0% | |
| GAAGAAGGTTTCGGATGTTA+GGG | - | chr7.4:10023570-10023589 | MS.gene018541:CDS | 40.0% | |
| GAAGATGAGGATTTGATTGG+TGG | + | chr7.4:10022968-10022987 | None:intergenic | 40.0% | |
| GTTGTGCAAGAAACAGAAGA+AGG | - | chr7.4:10023555-10023574 | MS.gene018541:CDS | 40.0% | |
| TGAAATGCTTCAACTCGAAG+CGG | + | chr7.4:10023448-10023467 | None:intergenic | 40.0% | |
| TGAAGCTCTACGTGCTTTAA+TGG | - | chr7.4:10023252-10023271 | MS.gene018541:CDS | 40.0% | |
| TGGGAAGATGAGGATTTGAT+TGG | + | chr7.4:10022971-10022990 | None:intergenic | 40.0% | |
| TTGAACCTGAAGAAATGGAG+TGG | - | chr7.4:10023338-10023357 | MS.gene018541:CDS | 40.0% | |
| ! | TTGGTGGAGTAGGGTTATTT+TGG | + | chr7.4:10023018-10023037 | None:intergenic | 40.0% |
| ! | TTTAGGCCTTATCTGTGTCA+GGG | - | chr7.4:10023691-10023710 | MS.gene018541:CDS | 40.0% |
| !! | CTCAGATTAAGGTGATGGAA+GGG | - | chr7.4:10023611-10023630 | MS.gene018541:CDS | 40.0% |
| !! | CTTCGAGTTGAAGCATTTCA+TGG | - | chr7.4:10023448-10023467 | MS.gene018541:CDS | 40.0% |
| !! | GATGGAAGGGAATTTTTCAG+AGG | - | chr7.4:10023624-10023643 | MS.gene018541:CDS | 40.0% |
| !! | TGGTGGAGTAGGGTTATTTT+GGG | + | chr7.4:10023017-10023036 | None:intergenic | 40.0% |
| !! | TTTTAGGCCTTATCTGTGTC+AGG | - | chr7.4:10023690-10023709 | MS.gene018541:CDS | 40.0% |
| !!! | TTTGGGGTTTTTGAAACGCA+GGG | + | chr7.4:10023000-10023019 | None:intergenic | 40.0% |
| !!! | TTTTGGGGTTTTTGAAACGC+AGG | + | chr7.4:10023001-10023020 | None:intergenic | 40.0% |
| AAATTCGAGAGGGAAGAAGC+TGG | - | chr7.4:10023850-10023869 | MS.gene018541:CDS | 45.0% | |
| AGAAGAGAGAGGATAGGGTT+TGG | + | chr7.4:10023048-10023067 | None:intergenic | 45.0% | |
| AGAGAGGATAGGGTTTGGAA+AGG | + | chr7.4:10023043-10023062 | None:intergenic | 45.0% | |
| AGCTCTACGTGCTTTAATGG+AGG | - | chr7.4:10023255-10023274 | MS.gene018541:CDS | 45.0% | |
| ATGCATGTGGTTTCAACGAC+GGG | + | chr7.4:10023073-10023092 | None:intergenic | 45.0% | |
| CGTAGAGCTTCAGCATCATT+TGG | + | chr7.4:10023244-10023263 | None:intergenic | 45.0% | |
| GAGAGGATAGGGTTTGGAAA+GGG | + | chr7.4:10023042-10023061 | None:intergenic | 45.0% | |
| GATAGGGTTTGGAAAGGGTT+TGG | + | chr7.4:10023037-10023056 | None:intergenic | 45.0% | |
| GATGCATGTGGTTTCAACGA+CGG | + | chr7.4:10023074-10023093 | None:intergenic | 45.0% | |
| GGTTGCTCAGATTAAGGTGA+TGG | - | chr7.4:10023606-10023625 | MS.gene018541:CDS | 45.0% | |
| GTTGTGATTGAGTGAGAGGT+TGG | + | chr7.4:10022858-10022877 | None:intergenic | 45.0% | |
| TCTTCCCTCTCGAATTTCTG+CGG | + | chr7.4:10023847-10023866 | None:intergenic | 45.0% | |
| TTTCCCGCAGAAATTCGAGA+GGG | - | chr7.4:10023840-10023859 | MS.gene018541:CDS | 45.0% | |
| ! | CGTAACGGAAAATGCTACGA+CGG | - | chr7.4:10023174-10023193 | MS.gene018541:CDS | 45.0% |
| ! | CGTCGTAGCATTTTCCGTTA+CGG | + | chr7.4:10023176-10023195 | None:intergenic | 45.0% |
| ! | GTGATAAGGGGAATGATGGA+CGG | + | chr7.4:10022880-10022899 | None:intergenic | 45.0% |
| ! | TTTTCCCGCAGAAATTCGAG+AGG | - | chr7.4:10023839-10023858 | MS.gene018541:CDS | 45.0% |
| !! | AGAGGCGCTTAAAGCTTATC+AGG | - | chr7.4:10023642-10023661 | MS.gene018541:CDS | 45.0% |
| !! | GCTCAGATTAAGGTGATGGA+AGG | - | chr7.4:10023610-10023629 | MS.gene018541:CDS | 45.0% |
| !! | GGTGGAGTAGGGTTATTTTG+GGG | + | chr7.4:10023016-10023035 | None:intergenic | 45.0% |
| !! | TTGAAACGCAGGGTCGTTTT+GGG | + | chr7.4:10022990-10023009 | None:intergenic | 45.0% |
| !! | TTTGAAACGCAGGGTCGTTT+TGG | + | chr7.4:10022991-10023010 | None:intergenic | 45.0% |
| AAAGGAGAGGGAGGGTGATA+AGG | + | chr7.4:10022894-10022913 | None:intergenic | 50.0% | |
| AACGGAAAATGCTACGACGG+AGG | - | chr7.4:10023177-10023196 | MS.gene018541:CDS | 50.0% | |
| AAGGAGAGGGAGGGTGATAA+GGG | + | chr7.4:10022893-10022912 | None:intergenic | 50.0% | |
| ACGCATGAAGAAGAAAGCGG+TGG | + | chr7.4:10023107-10023126 | None:intergenic | 50.0% | |
| AGGGTTTGGAAAGGGTTTGG+TGG | + | chr7.4:10023034-10023053 | None:intergenic | 50.0% | |
| CATGAAGAAGAAAGCGGTGG+CGG | + | chr7.4:10023104-10023123 | None:intergenic | 50.0% | |
| CTTCCCTCTCGAATTTCTGC+GGG | + | chr7.4:10023846-10023865 | None:intergenic | 50.0% | |
| GAAGCTTGAACGAGGATGGA+GGG | + | chr7.4:10022946-10022965 | None:intergenic | 50.0% | |
| GACGGTTGTGATTGAGTGAG+AGG | + | chr7.4:10022862-10022881 | None:intergenic | 50.0% | |
| GAGGGTGATAAGGGGAATGA+TGG | + | chr7.4:10022884-10022903 | None:intergenic | 50.0% | |
| GATTGGTGGAAGCTTGAACG+AGG | + | chr7.4:10022954-10022973 | None:intergenic | 50.0% | |
| TGAGTGAGAGGTTGGAGTGA+CGG | + | chr7.4:10022850-10022869 | None:intergenic | 50.0% | |
| TGCATGTGGTTTCAACGACG+GGG | + | chr7.4:10023072-10023091 | None:intergenic | 50.0% | |
| TGGATGGGAACGAAAGGAGA+GGG | + | chr7.4:10022906-10022925 | None:intergenic | 50.0% | |
| ! | CGTAGCATTTTCCGTTACGG+TGG | + | chr7.4:10023173-10023192 | None:intergenic | 50.0% |
| ! | GCATTTTCCGTTACGGTGGT+CGG | + | chr7.4:10023169-10023188 | None:intergenic | 50.0% |
| ! | TGGACTTGTGATGGCGAGTT+CGG | - | chr7.4:10023468-10023487 | MS.gene018541:CDS | 50.0% |
| !! | GAATTGTGGTGGTGGTGGAT+GGG | + | chr7.4:10022921-10022940 | None:intergenic | 50.0% |
| !! | GGAAAGGGTTTGGTGGAGTA+GGG | + | chr7.4:10023027-10023046 | None:intergenic | 50.0% |
| !! | TGGAAAGGGTTTGGTGGAGT+AGG | + | chr7.4:10023028-10023047 | None:intergenic | 50.0% |
| !!! | AGGGTCGTTTTGGGAAGATG+AGG | + | chr7.4:10022981-10023000 | None:intergenic | 50.0% |
| AGAGGGAAGAAGCTGGTGCT+AGG | - | chr7.4:10023857-10023876 | MS.gene018541:CDS | 55.0% | |
| AGGAGAGGGAGGGTGATAAG+GGG | + | chr7.4:10022892-10022911 | None:intergenic | 55.0% | |
| ATGGGAACGAAAGGAGAGGG+AGG | + | chr7.4:10022903-10022922 | None:intergenic | 55.0% | |
| GAGGATGGAGGGAGGAATTG+TGG | + | chr7.4:10022935-10022954 | None:intergenic | 55.0% | |
| GATGGAGGGAGGAATTGTGG+TGG | + | chr7.4:10022932-10022951 | None:intergenic | 55.0% | |
| GCATGTGGTTTCAACGACGG+GGG | + | chr7.4:10023071-10023090 | None:intergenic | 55.0% | |
| GGAAGCTTGAACGAGGATGG+AGG | + | chr7.4:10022947-10022966 | None:intergenic | 55.0% | |
| GGGGGAGAAGAGAGAGGATA+GGG | + | chr7.4:10023053-10023072 | None:intergenic | 55.0% | |
| GGTGGAAGCTTGAACGAGGA+TGG | + | chr7.4:10022950-10022969 | None:intergenic | 55.0% | |
| GTGGATGGGAACGAAAGGAG+AGG | + | chr7.4:10022907-10022926 | None:intergenic | 55.0% | |
| TGGGAACGAAAGGAGAGGGA+GGG | + | chr7.4:10022902-10022921 | None:intergenic | 55.0% | |
| ! | AGGTTGGAGTGACGGAGGTT+GGG | + | chr7.4:10022842-10022861 | None:intergenic | 55.0% |
| ! | TTTTCCGTTACGGTGGTCGG+AGG | + | chr7.4:10023166-10023185 | None:intergenic | 55.0% |
| !! | GGAATTGTGGTGGTGGTGGA+TGG | + | chr7.4:10022922-10022941 | None:intergenic | 55.0% |
| !! | TGGTGGTGGATGGGAACGAA+AGG | + | chr7.4:10022912-10022931 | None:intergenic | 55.0% |
| AACGACGGGGGAGAAGAGAG+AGG | + | chr7.4:10023059-10023078 | None:intergenic | 60.0% | |
| CGGGGGAGAAGAGAGAGGAT+AGG | + | chr7.4:10023054-10023073 | None:intergenic | 60.0% | |
| CTCTCCTCCGACCACCGTAA+CGG | - | chr7.4:10023159-10023178 | MS.gene018541:CDS | 60.0% | |
| GCTTGAACGAGGATGGAGGG+AGG | + | chr7.4:10022943-10022962 | None:intergenic | 60.0% | |
| GGAGGGAGGAATTGTGGTGG+TGG | + | chr7.4:10022929-10022948 | None:intergenic | 60.0% | |
| GGCGGCGATAACGATGCATG+TGG | + | chr7.4:10023086-10023105 | None:intergenic | 60.0% | |
| GTGAGAGGTTGGAGTGACGG+AGG | + | chr7.4:10022847-10022866 | None:intergenic | 60.0% | |
| ! | CGGCGATGACAGGAGTGTGA+TGG | + | chr7.4:10023132-10023151 | None:intergenic | 60.0% |
| ! | GAGGTTGGAGTGACGGAGGT+TGG | + | chr7.4:10022843-10022862 | None:intergenic | 60.0% |
| ! | GGAGTGACGGAGGTTGGGTA+TGG | + | chr7.4:10022837-10022856 | None:intergenic | 60.0% |
| !! | GGGAGGAATTGTGGTGGTGG+TGG | + | chr7.4:10022926-10022945 | None:intergenic | 60.0% |
| GAGAGAGTGGCGGCGATGAC+AGG | + | chr7.4:10023142-10023161 | None:intergenic | 65.0% | |
| GGTCGGAGGAGAGAGAGTGG+CGG | + | chr7.4:10023152-10023171 | None:intergenic | 65.0% | |
| GGTGGTCGGAGGAGAGAGAG+TGG | + | chr7.4:10023155-10023174 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 10022827 | 10023885 | 10022827 | ID=MS.gene018541 |
| chr7.4 | mRNA | 10022827 | 10023885 | 10022827 | ID=MS.gene018541.t1;Parent=MS.gene018541 |
| chr7.4 | exon | 10022827 | 10023885 | 10022827 | ID=MS.gene018541.t1.exon1;Parent=MS.gene018541.t1 |
| chr7.4 | CDS | 10022827 | 10023885 | 10022827 | ID=cds.MS.gene018541.t1;Parent=MS.gene018541.t1 |
| Gene Sequence |
| Protein sequence |
