Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06470.t1 | XP_003602501.1 | 96.1 | 333 | 13 | 0 | 1 | 333 | 1 | 333 | 4.70E-176 | 627.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06470.t1 | Q9LS48 | 46.1 | 89 | 48 | 0 | 218 | 306 | 212 | 300 | 5.5e-16 | 86.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06470.t1 | G7JAC0 | 96.1 | 333 | 13 | 0 | 1 | 333 | 1 | 333 | 3.4e-176 | 627.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene06470 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene06470 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene06470 | 0.815696 | 8.10E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene06470 | 0.817647 | 2.96E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene06470 | 0.807338 | 5.31E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene06470 | 0.943109 | 2.17E-102 | -1.69E-46 |
| MS.gene049427 | MS.gene06470 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene06470 | 0.825682 | 4.10E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene06470 | 0.851381 | 9.21E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene06470 | 0.855962 | 4.44E-62 | -1.69E-46 |
| MS.gene049681 | MS.gene06470 | 0.826139 | 3.20E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene06470 | 0.873369 | 1.55E-67 | -1.69E-46 |
| MS.gene050076 | MS.gene06470 | 0.829916 | 3.94E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene06470 | 0.835822 | 1.34E-56 | -1.69E-46 |
| MS.gene050231 | MS.gene06470 | 0.850647 | 1.48E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene06470 | 0.902142 | 1.31E-78 | -1.69E-46 |
| MS.gene050397 | MS.gene06470 | 0.869224 | 3.63E-66 | -1.69E-46 |
| MS.gene050432 | MS.gene06470 | 0.8117 | 6.14E-51 | -1.69E-46 |
| MS.gene050464 | MS.gene06470 | 0.824858 | 6.43E-54 | -1.69E-46 |
| MS.gene050516 | MS.gene06470 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene06470 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene06470 | 0.84886 | 4.68E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene06470 | 0.821529 | 3.85E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene06470 | 0.809902 | 1.50E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene06470 | 0.841168 | 5.60E-58 | -1.69E-46 |
| MS.gene050783 | MS.gene06470 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene06470 | 0.804812 | 1.81E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene06470 | 0.812927 | 3.31E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene06470 | 0.876163 | 1.74E-68 | -1.69E-46 |
| MS.gene05105 | MS.gene06470 | 0.813078 | 3.07E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene06470 | 0.818076 | 2.37E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene06470 | 0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene06470 | 0.834625 | 2.69E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene06470 | 0.820089 | 8.24E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene06470 | 0.845622 | 3.62E-59 | -1.69E-46 |
| MS.gene051663 | MS.gene06470 | 0.835145 | 1.99E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene06470 | 0.882658 | 8.66E-71 | -1.69E-46 |
| MS.gene051877 | MS.gene06470 | 0.861655 | 8.81E-64 | -1.69E-46 |
| MS.gene052011 | MS.gene06470 | -0.851228 | 1.02E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene06470 | 0.865241 | 6.81E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene06470 | 0.828945 | 6.78E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene06470 | 0.846634 | 1.92E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene06470 | 0.850945 | 1.22E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene06470 | 0.881323 | 2.64E-70 | -1.69E-46 |
| MS.gene052287 | MS.gene06470 | 0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene06470 | 0.853272 | 2.67E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene06470 | 0.837976 | 3.78E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene06470 | 0.864225 | 1.42E-64 | -1.69E-46 |
| MS.gene052340 | MS.gene06470 | 0.83042 | 2.97E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene06470 | 0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene06470 | 0.863348 | 2.66E-64 | -1.69E-46 |
| MS.gene052982 | MS.gene06470 | 0.802908 | 4.49E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene06470 | 0.819668 | 1.03E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene06470 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene06470 | 0.813506 | 2.47E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene06470 | 0.904965 | 7.07E-80 | -1.69E-46 |
| MS.gene053907 | MS.gene06470 | 0.816759 | 4.68E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene06470 | 0.816679 | 4.88E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene06470 | 0.840406 | 8.86E-58 | -1.69E-46 |
| MS.gene054011 | MS.gene06470 | 0.853186 | 2.82E-61 | -1.69E-46 |
| MS.gene054012 | MS.gene06470 | 0.85308 | 3.03E-61 | -1.69E-46 |
| MS.gene054013 | MS.gene06470 | 0.84564 | 3.58E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene06470 | 0.841671 | 4.13E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene06470 | 0.836659 | 8.22E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene06470 | 0.866963 | 1.94E-65 | -1.69E-46 |
| MS.gene05455 | MS.gene06470 | 0.852624 | 4.09E-61 | -1.69E-46 |
| MS.gene054719 | MS.gene06470 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene06470 | 0.835918 | 1.27E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene06470 | 0.833727 | 4.52E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene06470 | 0.832933 | 7.12E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene06470 | 0.81847 | 1.93E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene06470 | 0.829049 | 6.40E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene06470 | 0.845918 | 3.01E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene06470 | 0.890338 | 1.08E-73 | -1.69E-46 |
| MS.gene055303 | MS.gene06470 | 0.817706 | 2.87E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene06470 | 0.885137 | 1.05E-71 | -1.69E-46 |
| MS.gene055412 | MS.gene06470 | 0.801296 | 9.63E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene06470 | 0.898007 | 8.08E-77 | -1.69E-46 |
| MS.gene055428 | MS.gene06470 | 0.891515 | 3.70E-74 | -1.69E-46 |
| MS.gene05553 | MS.gene06470 | 0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene06470 | 0.820663 | 6.09E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene06470 | 0.864527 | 1.14E-64 | -1.69E-46 |
| MS.gene055712 | MS.gene06470 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene06470 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene06470 | 0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene06470 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene06470 | 0.860848 | 1.55E-63 | -1.69E-46 |
| MS.gene056407 | MS.gene06470 | 0.852 | 6.15E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene06470 | 0.857582 | 1.48E-62 | -1.69E-46 |
| MS.gene056452 | MS.gene06470 | 0.85575 | 5.11E-62 | -1.69E-46 |
| MS.gene056497 | MS.gene06470 | 0.802247 | 6.14E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene06470 | 0.863522 | 2.34E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene06470 | 0.823631 | 1.25E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene06470 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene06470 | 0.846459 | 2.14E-59 | -1.69E-46 |
| MS.gene056846 | MS.gene06470 | 0.845266 | 4.52E-59 | -1.69E-46 |
| MS.gene056899 | MS.gene06470 | -0.822275 | 2.58E-53 | -1.69E-46 |
| MS.gene056902 | MS.gene06470 | 0.83169 | 1.45E-55 | -1.69E-46 |
| MS.gene056931 | MS.gene06470 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene06470 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene056935 | MS.gene06470 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene06470 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene06470 | 0.859148 | 5.05E-63 | -1.69E-46 |
| MS.gene057121 | MS.gene06470 | 0.891546 | 3.60E-74 | -1.69E-46 |
| MS.gene057123 | MS.gene06470 | 0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene06470 | 0.830481 | 2.87E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene06470 | 0.871799 | 5.19E-67 | -1.69E-46 |
| MS.gene057295 | MS.gene06470 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene05733 | MS.gene06470 | 0.834437 | 3.00E-56 | -1.69E-46 |
| MS.gene057439 | MS.gene06470 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene06470 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene06470 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene06470 | 0.842752 | 2.13E-58 | -1.69E-46 |
| MS.gene057476 | MS.gene06470 | 0.820392 | 7.03E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene06470 | 0.839233 | 1.79E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene06470 | 0.834195 | 3.45E-56 | -1.69E-46 |
| MS.gene057845 | MS.gene06470 | 0.813731 | 2.21E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene06470 | 0.886218 | 4.14E-72 | -1.69E-46 |
| MS.gene058082 | MS.gene06470 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene06470 | 0.90589 | 2.66E-80 | -1.69E-46 |
| MS.gene058142 | MS.gene06470 | 0.836923 | 7.04E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene06470 | 0.851356 | 9.36E-61 | -1.69E-46 |
| MS.gene058276 | MS.gene06470 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene06470 | 0.843422 | 1.41E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene06470 | 0.813863 | 2.06E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene06470 | 0.811298 | 7.51E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene06470 | 0.910982 | 1.02E-82 | -1.69E-46 |
| MS.gene058710 | MS.gene06470 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene06470 | 0.828759 | 7.52E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene06470 | 0.81715 | 3.83E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene06470 | 0.850368 | 1.78E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene06470 | 0.800428 | 1.45E-48 | -1.69E-46 |
| MS.gene058993 | MS.gene06470 | 0.82295 | 1.80E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene06470 | 0.904462 | 1.20E-79 | -1.69E-46 |
| MS.gene059141 | MS.gene06470 | 0.834477 | 2.93E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene06470 | 0.833336 | 5.65E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene06470 | 0.854629 | 1.08E-61 | -1.69E-46 |
| MS.gene059462 | MS.gene06470 | 0.803593 | 3.24E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene06470 | 0.86617 | 3.47E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene06470 | 0.830605 | 2.67E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene06470 | 0.858676 | 6.99E-63 | -1.69E-46 |
| MS.gene05959 | MS.gene06470 | 0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene06470 | 0.831955 | 1.24E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene06470 | 0.864881 | 8.84E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene06470 | 0.863034 | 3.32E-64 | -1.69E-46 |
| MS.gene059695 | MS.gene06470 | 0.860626 | 1.81E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene06470 | 0.892219 | 1.94E-74 | -1.69E-46 |
| MS.gene059894 | MS.gene06470 | 0.825233 | 5.24E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene06470 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene06470 | 0.855665 | 5.42E-62 | -1.69E-46 |
| MS.gene060403 | MS.gene06470 | 0.826215 | 3.07E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene06470 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene06470 | 0.828329 | 9.55E-55 | -1.69E-46 |
| MS.gene06090 | MS.gene06470 | 0.851865 | 6.72E-61 | -1.69E-46 |
| MS.gene060986 | MS.gene06470 | 0.800325 | 1.52E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene06470 | 0.875929 | 2.09E-68 | -1.69E-46 |
| MS.gene061154 | MS.gene06470 | 0.812783 | 3.56E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene06470 | 0.807757 | 4.32E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64503 | MS.gene06470 | PPI |
| MS.gene06470 | MS.gene09833 | PPI |
| MS.gene061914 | MS.gene06470 | PPI |
| MS.gene018541 | MS.gene06470 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06470.t1 | MTR_3g095070 | 96.096 | 333 | 13 | 0 | 1 | 333 | 1 | 333 | 0.0 | 661 |
| MS.gene06470.t1 | MTR_7g100328 | 37.367 | 281 | 151 | 6 | 60 | 324 | 74 | 345 | 9.42e-52 | 175 |
| MS.gene06470.t1 | MTR_1g067600 | 33.333 | 210 | 134 | 4 | 104 | 310 | 132 | 338 | 3.83e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06470.t1 | AT4G39470 | 54.513 | 277 | 120 | 2 | 62 | 333 | 66 | 341 | 6.08e-103 | 306 |
| MS.gene06470.t1 | AT3G18420 | 36.992 | 246 | 142 | 4 | 74 | 306 | 55 | 300 | 2.43e-42 | 149 |
| MS.gene06470.t1 | AT2G37400 | 39.896 | 193 | 115 | 1 | 123 | 314 | 129 | 321 | 9.74e-38 | 137 |
| MS.gene06470.t1 | AT3G53560 | 40.000 | 195 | 112 | 2 | 123 | 314 | 129 | 321 | 2.32e-37 | 137 |
| MS.gene06470.t1 | AT3G53560 | 39.320 | 206 | 119 | 3 | 112 | 314 | 167 | 369 | 4.78e-37 | 137 |
| MS.gene06470.t1 | AT5G02590 | 39.691 | 194 | 115 | 2 | 115 | 307 | 120 | 312 | 5.50e-37 | 135 |
| MS.gene06470.t1 | AT3G09490 | 35.814 | 215 | 130 | 3 | 92 | 303 | 84 | 293 | 1.65e-30 | 118 |
Find 67 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATTGTATTTGGAAATTT+TGG | 0.111951 | 3.2:-79431426 | MS.gene06470:CDS |
| TGTTGATTCAGCTGAAATTT+TGG | 0.183578 | 3.2:-79431645 | MS.gene06470:CDS |
| TAAGGCTAAAGGATTGTATT+TGG | 0.219222 | 3.2:-79431435 | MS.gene06470:CDS |
| AACAAGTGCATAGTGATAAA+TGG | 0.231649 | 3.2:+79431819 | None:intergenic |
| AATTCCTTCTGAAACTTTAC+TGG | 0.241171 | 3.2:+79429583 | None:intergenic |
| ATACAGTCTTCTAGATAAAA+AGG | 0.263949 | 3.2:-79429710 | MS.gene06470:CDS |
| AAAATTGTGGAGGGTGTTAA+TGG | 0.334111 | 3.2:+79431788 | None:intergenic |
| AGAAGGGAATTGGGGAGATA+TGG | 0.336995 | 3.2:+79431911 | None:intergenic |
| TGGTTGTGTATGGGAAAATT+AGG | 0.344777 | 3.2:-79431574 | MS.gene06470:CDS |
| GTGTGCTTTGCAGGGTGATT+TGG | 0.355123 | 3.2:-79430002 | MS.gene06470:intron |
| CCCTTCTGTGGAAACTCTTC+AGG | 0.358106 | 3.2:+79429646 | None:intergenic |
| AGCCTCCACTCAACCTCATT+TGG | 0.359412 | 3.2:+79431497 | None:intergenic |
| TCGTGGCAAAAGAAGGGAAT+TGG | 0.399875 | 3.2:+79431901 | None:intergenic |
| CGTGGCAAAAGAAGGGAATT+GGG | 0.418032 | 3.2:+79431902 | None:intergenic |
| ACAAGTGCATAGTGATAAAT+GGG | 0.468344 | 3.2:+79431820 | None:intergenic |
| GCTCTTAAAGTGGTTGTGTA+TGG | 0.470707 | 3.2:-79431584 | MS.gene06470:CDS |
| TTGCAGGGTGATTTGGAGGA+GGG | 0.472903 | 3.2:-79429995 | MS.gene06470:intron |
| TTACGGAGGAGAGAAATATA+AGG | 0.473332 | 3.2:-79430164 | MS.gene06470:CDS |
| TACGAATTCGTGGCAAAAGA+AGG | 0.481369 | 3.2:+79431894 | None:intergenic |
| TTTGCAGGGTGATTTGGAGG+AGG | 0.482427 | 3.2:-79429996 | MS.gene06470:intron |
| GGTTGAAGTGAAATTGATAA+GGG | 0.483895 | 3.2:+79431860 | None:intergenic |
| TGCACAAATGCGTGTTGTAC+AGG | 0.487235 | 3.2:-79430133 | MS.gene06470:intron |
| TGCTTTGCAGGGTGATTTGG+AGG | 0.487354 | 3.2:-79429999 | MS.gene06470:intron |
| GATATCACCTTAGCAGCAAA+AGG | 0.497307 | 3.2:-79429613 | MS.gene06470:CDS |
| TTCAGCATTTCAAATACAGC+AGG | 0.497693 | 3.2:+79430222 | None:intergenic |
| GACAATGGGGTATTTGAGTA+AGG | 0.500527 | 3.2:-79431453 | MS.gene06470:CDS |
| CTCTTAAAGTGGTTGTGTAT+GGG | 0.502104 | 3.2:-79431583 | MS.gene06470:CDS |
| AAGCTGAGAAGTTTGTGAAG+AGG | 0.509773 | 3.2:-79431535 | MS.gene06470:CDS |
| TGGTTGAAGTGAAATTGATA+AGG | 0.510289 | 3.2:+79431859 | None:intergenic |
| ATTCCTTCTGAAACTTTACT+GGG | 0.524396 | 3.2:+79429584 | None:intergenic |
| AAACTCACCTGGCAAAGATA+AGG | 0.536373 | 3.2:+79429923 | None:intergenic |
| GGGTATTTGAGTAAGGCTAA+AGG | 0.536389 | 3.2:-79431446 | MS.gene06470:CDS |
| GCATTGTGTTATGAGACAAT+GGG | 0.536548 | 3.2:-79431467 | MS.gene06470:CDS |
| GCCTGAAGAGTTTCCACAGA+AGG | 0.536929 | 3.2:-79429647 | MS.gene06470:CDS |
| AAATGTTGAGGCTCTTAAAG+TGG | 0.543541 | 3.2:-79431594 | MS.gene06470:CDS |
| TATTAATGAAAACAAAGTTA+CGG | 0.545367 | 3.2:-79430181 | MS.gene06470:CDS |
| GGTACTGAAACTGCAAAAGC+GGG | 0.549723 | 3.2:+79431671 | None:intergenic |
| CCTGAAGAGTTTCCACAGAA+GGG | 0.557973 | 3.2:-79429646 | MS.gene06470:CDS |
| AAGTTGGTTAAAGTTGTTTG+AGG | 0.558821 | 3.2:+79431761 | None:intergenic |
| GGAGGGTGTTAATGGAGTGC+GGG | 0.560063 | 3.2:+79431796 | None:intergenic |
| TGCATTGTGTTATGAGACAA+TGG | 0.562265 | 3.2:-79431468 | MS.gene06470:CDS |
| GATTGATGAGGAACCAAATG+AGG | 0.565692 | 3.2:-79431510 | MS.gene06470:CDS |
| TGGAGGGTGTTAATGGAGTG+CGG | 0.568184 | 3.2:+79431795 | None:intergenic |
| TCATCAAGAAATCCCTTCTG+TGG | 0.572197 | 3.2:+79429634 | None:intergenic |
| TTGTTGCAGATACGAATTCG+TGG | 0.574634 | 3.2:+79431884 | None:intergenic |
| TGAAGAGCTCTAACAAGAAG+AGG | 0.582607 | 3.2:+79431395 | None:intergenic |
| AGGAACCAAATGAGGTTGAG+TGG | 0.584513 | 3.2:-79431502 | MS.gene06470:CDS |
| ACGAATTCGTGGCAAAAGAA+GGG | 0.586466 | 3.2:+79431895 | None:intergenic |
| ATCCCCAGTAAAGTTTCAGA+AGG | 0.590040 | 3.2:-79429587 | MS.gene06470:CDS |
| AGGTACTGAAACTGCAAAAG+CGG | 0.602398 | 3.2:+79431670 | None:intergenic |
| TGTGAAGAGGTTGATTGATG+AGG | 0.608344 | 3.2:-79431522 | MS.gene06470:CDS |
| TGTTTGAGGTGAGAAAATTG+TGG | 0.610889 | 3.2:+79431775 | None:intergenic |
| GAAGGATTCAAGAAATGTTG+AGG | 0.622010 | 3.2:-79431606 | MS.gene06470:CDS |
| TGTATGGGAAAATTAGGAGA+GGG | 0.623027 | 3.2:-79431568 | MS.gene06470:CDS |
| ATTTCAGCTGAATCAACAGA+AGG | 0.625556 | 3.2:+79431650 | None:intergenic |
| TGAGGTGAGAAAATTGTGGA+GGG | 0.628555 | 3.2:+79431779 | None:intergenic |
| GTGTATGGGAAAATTAGGAG+AGG | 0.651978 | 3.2:-79431569 | MS.gene06470:CDS |
| AGATAAGGCCTAAAATCTCG+AGG | 0.652081 | 3.2:+79429938 | None:intergenic |
| TTCCTTCTGAAACTTTACTG+GGG | 0.652971 | 3.2:+79429585 | None:intergenic |
| GTGGCAAAAGAAGGGAATTG+GGG | 0.656867 | 3.2:+79431903 | None:intergenic |
| TGTATTTGAAATGCTGAACA+AGG | 0.665874 | 3.2:-79430217 | MS.gene06470:CDS |
| TTGAGGTGAGAAAATTGTGG+AGG | 0.671928 | 3.2:+79431778 | None:intergenic |
| AACCAAATGAGGTTGAGTGG+AGG | 0.677766 | 3.2:-79431499 | MS.gene06470:CDS |
| TAATGAAAACAAAGTTACGG+AGG | 0.686188 | 3.2:-79430178 | MS.gene06470:CDS |
| GAGATATGGTTTGAACTCTG+AGG | 0.695791 | 3.2:+79431925 | None:intergenic |
| CTCTGAGGAGATGAAGAGAG+TGG | 0.713127 | 3.2:+79431940 | None:intergenic |
| CATTGTGTTATGAGACAATG+GGG | 0.737873 | 3.2:-79431466 | MS.gene06470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAATGAAAACAAAGTTA+CGG | - | chr3.2:79431333-79431352 | MS.gene06470:intron | 15.0% |
| !!! | TAATACAATTACTATTTTGA+CGG | + | chr3.2:79431139-79431158 | None:intergenic | 15.0% |
| !!! | TCAAATTTTGATTAGAAATT+TGG | - | chr3.2:79430265-79430284 | MS.gene06470:intron | 15.0% |
| !! | AAATAAAGAGTTAAGAACTT+AGG | + | chr3.2:79430722-79430741 | None:intergenic | 20.0% |
| !! | AATAAAGAGTTAAGAACTTA+GGG | + | chr3.2:79430721-79430740 | None:intergenic | 20.0% |
| !! | CAAAACAATATAAGCATAAT+AGG | + | chr3.2:79430826-79430845 | None:intergenic | 20.0% |
| !! | CAATACAATAATTTCATGAA+TGG | + | chr3.2:79431752-79431771 | None:intergenic | 20.0% |
| !! | TTTATGTGATGAATATTAGA+CGG | - | chr3.2:79430895-79430914 | MS.gene06470:intron | 20.0% |
| !! | TTTGATTATGATTGAAAAGT+TGG | - | chr3.2:79430215-79430234 | MS.gene06470:CDS | 20.0% |
| !!! | AAAGTTTCATTTTTTCTCAT+TGG | - | chr3.2:79429786-79429805 | MS.gene06470:intron | 20.0% |
| !!! | AAGTTTCATTTTTTCTCATT+GGG | - | chr3.2:79429787-79429806 | MS.gene06470:intron | 20.0% |
| !!! | ATATGAATGCTTTTTTGTTT+AGG | - | chr3.2:79430238-79430257 | MS.gene06470:CDS | 20.0% |
| !!! | TAATATAGTTCTGTAAGATA+TGG | - | chr3.2:79431706-79431725 | MS.gene06470:CDS | 20.0% |
| !!! | TATATCTGTTTTTGTTTTGA+TGG | - | chr3.2:79430161-79430180 | MS.gene06470:CDS | 20.0% |
| ! | AACATCCAAAATTCATACAT+GGG | + | chr3.2:79430776-79430795 | None:intergenic | 25.0% |
| ! | AATCTGAATCCAAAGTAAAA+TGG | + | chr3.2:79431035-79431054 | None:intergenic | 25.0% |
| ! | AATTGTCAAAATAACAGCTA+TGG | - | chr3.2:79430937-79430956 | MS.gene06470:intron | 25.0% |
| ! | AGAACAAAAATTAAAGTCAG+AGG | + | chr3.2:79431646-79431665 | None:intergenic | 25.0% |
| ! | ATACAGTCTTCTAGATAAAA+AGG | - | chr3.2:79431804-79431823 | MS.gene06470:CDS | 25.0% |
| ! | ATGCAATCATATTTGCATAA+AGG | + | chr3.2:79430670-79430689 | None:intergenic | 25.0% |
| ! | ATGTTAAAAGAATATGTTGC+AGG | - | chr3.2:79431774-79431793 | MS.gene06470:CDS | 25.0% |
| ! | TCACATAAATTTACAATCAC+AGG | + | chr3.2:79430884-79430903 | None:intergenic | 25.0% |
| ! | TGTTAAAAGAATATGTTGCA+GGG | - | chr3.2:79431775-79431794 | MS.gene06470:CDS | 25.0% |
| ! | TTTGATGGAATTATGAATGT+TGG | - | chr3.2:79430176-79430195 | MS.gene06470:CDS | 25.0% |
| !! | AACTTTTTGTGAAATGAAGT+TGG | + | chr3.2:79429772-79429791 | None:intergenic | 25.0% |
| !! | AGGATTGTATTTGGAAATTT+TGG | - | chr3.2:79430088-79430107 | MS.gene06470:intron | 25.0% |
| !! | TAAAACCCATGTATGAATTT+TGG | - | chr3.2:79430768-79430787 | MS.gene06470:intron | 25.0% |
| !!! | AGTTGTGAGAATGTTTTAAA+GGG | - | chr3.2:79430358-79430377 | MS.gene06470:intron | 25.0% |
| !!! | ATAGCTGTTATTTTGACAAT+TGG | + | chr3.2:79430938-79430957 | None:intergenic | 25.0% |
| !!! | ATTTGGAAATTTTGGAGAAT+TGG | - | chr3.2:79430096-79430115 | MS.gene06470:intron | 25.0% |
| !!! | GTCTTTTTGGAGTAATTATT+TGG | - | chr3.2:79431475-79431494 | MS.gene06470:CDS | 25.0% |
| !!! | TAGTTGTGAGAATGTTTTAA+AGG | - | chr3.2:79430357-79430376 | MS.gene06470:intron | 25.0% |
| !!! | TGTTTTTTCATAAGTTATCG+TGG | + | chr3.2:79430444-79430463 | None:intergenic | 25.0% |
| AACAAGTGCATAGTGATAAA+TGG | + | chr3.2:79429698-79429717 | None:intergenic | 30.0% | |
| AATATGATTGCATGTTGACA+TGG | - | chr3.2:79430677-79430696 | MS.gene06470:intron | 30.0% | |
| ACAAGTGCATAGTGATAAAT+GGG | + | chr3.2:79429697-79429716 | None:intergenic | 30.0% | |
| CAACATCCAAAATTCATACA+TGG | + | chr3.2:79430777-79430796 | None:intergenic | 30.0% | |
| GGTTGAAGTGAAATTGATAA+GGG | + | chr3.2:79429657-79429676 | None:intergenic | 30.0% | |
| TAAGGCTAAAGGATTGTATT+TGG | - | chr3.2:79430079-79430098 | MS.gene06470:intron | 30.0% | |
| TAATGAAAACAAAGTTACGG+AGG | - | chr3.2:79431336-79431355 | MS.gene06470:intron | 30.0% | |
| TACTTTGGATTCAGATTTGA+AGG | - | chr3.2:79431038-79431057 | MS.gene06470:intron | 30.0% | |
| TGGTTGAAGTGAAATTGATA+AGG | + | chr3.2:79429658-79429677 | None:intergenic | 30.0% | |
| TGTCATGAAATCAATTTACC+AGG | - | chr3.2:79431167-79431186 | MS.gene06470:intron | 30.0% | |
| TTGAGCCTTAGTATGTATTT+CGG | - | chr3.2:79430851-79430870 | MS.gene06470:intron | 30.0% | |
| ! | AACCATGAACAATGTCTTTT+TGG | - | chr3.2:79431462-79431481 | MS.gene06470:CDS | 30.0% |
| ! | AAGTTGGTTAAAGTTGTTTG+AGG | + | chr3.2:79429756-79429775 | None:intergenic | 30.0% |
| ! | ATCAAAATCCTCGAGATTTT+AGG | - | chr3.2:79431568-79431587 | MS.gene06470:CDS | 30.0% |
| ! | GGTAAATTGATTTCATGACA+TGG | + | chr3.2:79431167-79431186 | None:intergenic | 30.0% |
| ! | TGTATTTGAAATGCTGAACA+AGG | - | chr3.2:79431297-79431316 | MS.gene06470:intron | 30.0% |
| !! | AATTCCTTCTGAAACTTTAC+TGG | + | chr3.2:79431934-79431953 | None:intergenic | 30.0% |
| !! | AATTTTGGAGGAGAAGATTT+TGG | - | chr3.2:79429884-79429903 | MS.gene06470:intron | 30.0% |
| !! | ATTCCTTCTGAAACTTTACT+GGG | + | chr3.2:79431933-79431952 | None:intergenic | 30.0% |
| !! | TTGTTGACTTAGTGTTTGTT+TGG | - | chr3.2:79430311-79430330 | MS.gene06470:intron | 30.0% |
| !!! | TGTTGATTCAGCTGAAATTT+TGG | - | chr3.2:79429869-79429888 | MS.gene06470:intron | 30.0% |
| AAATGTTGAGGCTCTTAAAG+TGG | - | chr3.2:79429920-79429939 | MS.gene06470:intron | 35.0% | |
| AACAAACAAATTGAGTGTCC+TGG | + | chr3.2:79431188-79431207 | None:intergenic | 35.0% | |
| AACTCGTAGTAGATAAGCAA+AGG | + | chr3.2:79431435-79431454 | None:intergenic | 35.0% | |
| ATAACATATGTGTGCTTTGC+AGG | - | chr3.2:79431503-79431522 | MS.gene06470:CDS | 35.0% | |
| ATTTCAGCTGAATCAACAGA+AGG | + | chr3.2:79429867-79429886 | None:intergenic | 35.0% | |
| CAGTCTTCTAGATAAAAAGG+AGG | - | chr3.2:79431807-79431826 | MS.gene06470:CDS | 35.0% | |
| CATTGTGTTATGAGACAATG+GGG | - | chr3.2:79430048-79430067 | MS.gene06470:intron | 35.0% | |
| CTCCAAAAAGACATTGTTCA+TGG | + | chr3.2:79431467-79431486 | None:intergenic | 35.0% | |
| CTCTTAAAGTGGTTGTGTAT+GGG | - | chr3.2:79429931-79429950 | MS.gene06470:CDS | 35.0% | |
| CTGAATCCAAAGTAAAATGG+TGG | + | chr3.2:79431032-79431051 | None:intergenic | 35.0% | |
| GAAGGATTCAAGAAATGTTG+AGG | - | chr3.2:79429908-79429927 | MS.gene06470:intron | 35.0% | |
| GCATTGTGTTATGAGACAAT+GGG | - | chr3.2:79430047-79430066 | MS.gene06470:intron | 35.0% | |
| GTGATGCACAAAAACAATGA+GGG | - | chr3.2:79431268-79431287 | MS.gene06470:intron | 35.0% | |
| TAACATATGTGTGCTTTGCA+GGG | - | chr3.2:79431504-79431523 | MS.gene06470:CDS | 35.0% | |
| TCTTCCCGAAATACATACTA+AGG | + | chr3.2:79430859-79430878 | None:intergenic | 35.0% | |
| TGAGCCTTAGTATGTATTTC+GGG | - | chr3.2:79430852-79430871 | MS.gene06470:intron | 35.0% | |
| TGCATTGTGTTATGAGACAA+TGG | - | chr3.2:79430046-79430065 | MS.gene06470:intron | 35.0% | |
| TGGTTGTGTATGGGAAAATT+AGG | - | chr3.2:79429940-79429959 | MS.gene06470:CDS | 35.0% | |
| TGTATGGGAAAATTAGGAGA+GGG | - | chr3.2:79429946-79429965 | MS.gene06470:CDS | 35.0% | |
| TTACGGAGGAGAGAAATATA+AGG | - | chr3.2:79431350-79431369 | MS.gene06470:intron | 35.0% | |
| TTAGTATGTATTTCGGGAAG+AGG | - | chr3.2:79430858-79430877 | MS.gene06470:intron | 35.0% | |
| TTCAGCATTTCAAATACAGC+AGG | + | chr3.2:79431295-79431314 | None:intergenic | 35.0% | |
| TTTGCTAGATGCTTCTTTGA+CGG | - | chr3.2:79431064-79431083 | MS.gene06470:intron | 35.0% | |
| TTTGGATTCAGATTTGAAGG+TGG | - | chr3.2:79431041-79431060 | MS.gene06470:intron | 35.0% | |
| ! | AAACAAGTTGTGTTGCTGAT+TGG | - | chr3.2:79430568-79430587 | MS.gene06470:intron | 35.0% |
| ! | AACTGTGCAGTGTTGTTAAA+TGG | - | chr3.2:79430965-79430984 | MS.gene06470:intron | 35.0% |
| ! | AGTGATACTCTCTTTTCTAC+AGG | - | chr3.2:79431234-79431253 | MS.gene06470:intron | 35.0% |
| ! | GATTGGTAATCATGGCTATT+AGG | - | chr3.2:79430585-79430604 | MS.gene06470:intron | 35.0% |
| ! | GTGATACTCTCTTTTCTACA+GGG | - | chr3.2:79431235-79431254 | MS.gene06470:intron | 35.0% |
| ! | TGAACACCACCATTTTACTT+TGG | - | chr3.2:79431023-79431042 | MS.gene06470:intron | 35.0% |
| ! | TGATTCAGCTGAAATTTTGG+AGG | - | chr3.2:79429872-79429891 | MS.gene06470:intron | 35.0% |
| ! | TGTTTGAGGTGAGAAAATTG+TGG | + | chr3.2:79429742-79429761 | None:intergenic | 35.0% |
| !! | AAAATTGTGGAGGGTGTTAA+TGG | + | chr3.2:79429729-79429748 | None:intergenic | 35.0% |
| !! | TTCCTTCTGAAACTTTACTG+GGG | + | chr3.2:79431932-79431951 | None:intergenic | 35.0% |
| !!! | ACTATTTTGACGGCATTTTG+TGG | + | chr3.2:79431129-79431148 | None:intergenic | 35.0% |
| AAACTCACCTGGCAAAGATA+AGG | + | chr3.2:79431594-79431613 | None:intergenic | 40.0% | |
| AAGCTGAGAAGTTTGTGAAG+AGG | - | chr3.2:79429979-79429998 | MS.gene06470:CDS | 40.0% | |
| AAGTTATCGTGGAGAGCTTA+TGG | + | chr3.2:79430433-79430452 | None:intergenic | 40.0% | |
| ACGAATTCGTGGCAAAAGAA+GGG | + | chr3.2:79429622-79429641 | None:intergenic | 40.0% | |
| AGATAAGGCCTAAAATCTCG+AGG | + | chr3.2:79431579-79431598 | None:intergenic | 40.0% | |
| ATCCCCAGTAAAGTTTCAGA+AGG | - | chr3.2:79431927-79431946 | MS.gene06470:CDS | 40.0% | |
| GAGATATGGTTTGAACTCTG+AGG | + | chr3.2:79429592-79429611 | None:intergenic | 40.0% | |
| GATATCACCTTAGCAGCAAA+AGG | - | chr3.2:79431901-79431920 | MS.gene06470:CDS | 40.0% | |
| GATTGATGAGGAACCAAATG+AGG | - | chr3.2:79430004-79430023 | MS.gene06470:intron | 40.0% | |
| GATTTGCATACAAACTCACC+TGG | + | chr3.2:79431605-79431624 | None:intergenic | 40.0% | |
| GCTCTTAAAGTGGTTGTGTA+TGG | - | chr3.2:79429930-79429949 | MS.gene06470:intron | 40.0% | |
| GGGTATTTGAGTAAGGCTAA+AGG | - | chr3.2:79430068-79430087 | MS.gene06470:intron | 40.0% | |
| GGTGATGCACAAAAACAATG+AGG | - | chr3.2:79431267-79431286 | MS.gene06470:intron | 40.0% | |
| GTGTATGGGAAAATTAGGAG+AGG | - | chr3.2:79429945-79429964 | MS.gene06470:CDS | 40.0% | |
| TACGAATTCGTGGCAAAAGA+AGG | + | chr3.2:79429623-79429642 | None:intergenic | 40.0% | |
| TATGACGCTTGTCAAAACAC+CGG | + | chr3.2:79431002-79431021 | None:intergenic | 40.0% | |
| TCATCAAGAAATCCCTTCTG+TGG | + | chr3.2:79431883-79431902 | None:intergenic | 40.0% | |
| TGAGGTGAGAAAATTGTGGA+GGG | + | chr3.2:79429738-79429757 | None:intergenic | 40.0% | |
| TTGAGGTGAGAAAATTGTGG+AGG | + | chr3.2:79429739-79429758 | None:intergenic | 40.0% | |
| TTGTTGCAGATACGAATTCG+TGG | + | chr3.2:79429633-79429652 | None:intergenic | 40.0% | |
| ! | ACTCTCTTTTCTACAGGGTT+TGG | - | chr3.2:79431240-79431259 | MS.gene06470:intron | 40.0% |
| ! | GACAATGGGGTATTTGAGTA+AGG | - | chr3.2:79430061-79430080 | MS.gene06470:intron | 40.0% |
| ! | GTGTTGCTGATTGGTAATCA+TGG | - | chr3.2:79430577-79430596 | MS.gene06470:intron | 40.0% |
| ! | TGAAGAGCTCTAACAAGAAG+AGG | + | chr3.2:79430122-79430141 | None:intergenic | 40.0% |
| ! | TGGGTAGCACGAAATTTTGA+TGG | + | chr3.2:79429678-79429697 | None:intergenic | 40.0% |
| ! | TGTGAAGAGGTTGATTGATG+AGG | - | chr3.2:79429992-79430011 | MS.gene06470:CDS | 40.0% |
| ! | TTTTCTACAGGGTTTGGCTA+TGG | - | chr3.2:79431246-79431265 | MS.gene06470:intron | 40.0% |
| !! | AGGTACTGAAACTGCAAAAG+CGG | + | chr3.2:79429847-79429866 | None:intergenic | 40.0% |
| !! | TTTTAGGCCTTATCTTTGCC+AGG | - | chr3.2:79431584-79431603 | MS.gene06470:CDS | 40.0% |
| AACCAAATGAGGTTGAGTGG+AGG | - | chr3.2:79430015-79430034 | MS.gene06470:intron | 45.0% | |
| AGAAGGGAATTGGGGAGATA+TGG | + | chr3.2:79429606-79429625 | None:intergenic | 45.0% | |
| AGGAACCAAATGAGGTTGAG+TGG | - | chr3.2:79430012-79430031 | MS.gene06470:intron | 45.0% | |
| CCTGAAGAGTTTCCACAGAA+GGG | - | chr3.2:79431868-79431887 | MS.gene06470:CDS | 45.0% | |
| CGTGGCAAAAGAAGGGAATT+GGG | + | chr3.2:79429615-79429634 | None:intergenic | 45.0% | |
| GATGAATATTAGACGGCGCT+AGG | - | chr3.2:79430902-79430921 | MS.gene06470:intron | 45.0% | |
| GTGGCAAAAGAAGGGAATTG+GGG | + | chr3.2:79429614-79429633 | None:intergenic | 45.0% | |
| TCGTGGCAAAAGAAGGGAAT+TGG | + | chr3.2:79429616-79429635 | None:intergenic | 45.0% | |
| TGCACAAATGCGTGTTGTAC+AGG | - | chr3.2:79431381-79431400 | MS.gene06470:intron | 45.0% | |
| ! | GCTTCTTTGACGGCATTTTG+TGG | - | chr3.2:79431074-79431093 | MS.gene06470:intron | 45.0% |
| ! | GGATGTTCCTTTTGCTGCTA+AGG | + | chr3.2:79431911-79431930 | None:intergenic | 45.0% |
| ! | GGTACTGAAACTGCAAAAGC+GGG | + | chr3.2:79429846-79429865 | None:intergenic | 45.0% |
| !! | GGAGGAGAAGATTTTGGAGA+AGG | - | chr3.2:79429890-79429909 | MS.gene06470:intron | 45.0% |
| AGCCTCCACTCAACCTCATT+TGG | + | chr3.2:79430020-79430039 | None:intergenic | 50.0% | |
| CCCTTCTGTGGAAACTCTTC+AGG | + | chr3.2:79431871-79431890 | None:intergenic | 50.0% | |
| GCCTGAAGAGTTTCCACAGA+AGG | - | chr3.2:79431867-79431886 | MS.gene06470:CDS | 50.0% | |
| GCTTGTCAAAACACCGGTCA+CGG | + | chr3.2:79430996-79431015 | None:intergenic | 50.0% | |
| GTGTGCTTTGCAGGGTGATT+TGG | - | chr3.2:79431512-79431531 | MS.gene06470:CDS | 50.0% | |
| ! | CTCTGAGGAGATGAAGAGAG+TGG | + | chr3.2:79429577-79429596 | None:intergenic | 50.0% |
| ! | TGCTTTGCAGGGTGATTTGG+AGG | - | chr3.2:79431515-79431534 | MS.gene06470:CDS | 50.0% |
| ! | TTGCAGGGTGATTTGGAGGA+GGG | - | chr3.2:79431519-79431538 | MS.gene06470:CDS | 50.0% |
| ! | TTTGCAGGGTGATTTGGAGG+AGG | - | chr3.2:79431518-79431537 | MS.gene06470:CDS | 50.0% |
| !! | TGGAGGGTGTTAATGGAGTG+CGG | + | chr3.2:79429722-79429741 | None:intergenic | 50.0% |
| TTAAATGGCGACGCCGTGAC+CGG | - | chr3.2:79430980-79430999 | MS.gene06470:intron | 55.0% | |
| !! | GGAGGGTGTTAATGGAGTGC+GGG | + | chr3.2:79429721-79429740 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79429555 | 79431981 | 79429555 | ID=MS.gene06470 |
| chr3.2 | mRNA | 79429555 | 79431981 | 79429555 | ID=MS.gene06470.t1;Parent=MS.gene06470 |
| chr3.2 | exon | 79431394 | 79431981 | 79431394 | ID=MS.gene06470.t1.exon1;Parent=MS.gene06470.t1 |
| chr3.2 | CDS | 79431394 | 79431981 | 79431394 | ID=cds.MS.gene06470.t1;Parent=MS.gene06470.t1 |
| chr3.2 | exon | 79430134 | 79430280 | 79430134 | ID=MS.gene06470.t1.exon2;Parent=MS.gene06470.t1 |
| chr3.2 | CDS | 79430134 | 79430280 | 79430134 | ID=cds.MS.gene06470.t1;Parent=MS.gene06470.t1 |
| chr3.2 | exon | 79429931 | 79430011 | 79429931 | ID=MS.gene06470.t1.exon3;Parent=MS.gene06470.t1 |
| chr3.2 | CDS | 79429931 | 79430011 | 79429931 | ID=cds.MS.gene06470.t1;Parent=MS.gene06470.t1 |
| chr3.2 | exon | 79429555 | 79429740 | 79429555 | ID=MS.gene06470.t1.exon4;Parent=MS.gene06470.t1 |
| chr3.2 | CDS | 79429555 | 79429740 | 79429555 | ID=cds.MS.gene06470.t1;Parent=MS.gene06470.t1 |
| Gene Sequence |
| Protein sequence |
