AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019708

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019708.t1 MTR_8g028435 87.363 364 14 2 1 332 1 364 0.0 639
MS.gene019708.t1 MTR_8g009110 80.548 365 38 3 1 332 1 365 0.0 589
MS.gene019708.t1 MTR_8g009160 79.945 364 41 2 1 332 1 364 0.0 585
MS.gene019708.t1 MTR_8g009090 78.846 364 45 2 1 332 1 364 0.0 582
MS.gene019708.t1 MTR_8g008930 76.164 365 54 2 1 332 1 365 0.0 567
MS.gene019708.t1 MTR_8g009170 77.869 366 47 4 1 332 1 366 0.0 559
MS.gene019708.t1 MTR_4g117880 71.311 366 71 3 1 332 1 366 0.0 535
MS.gene019708.t1 MTR_8g009150 70.137 365 56 4 1 332 1 345 5.04e-179 499
MS.gene019708.t1 MTR_8g009120 69.863 365 65 4 1 332 1 353 2.44e-174 488
MS.gene019708.t1 MTR_2g069190 65.909 352 86 2 15 332 20 371 4.85e-167 469
MS.gene019708.t1 MTR_2g069090 65.439 353 87 3 15 332 20 372 1.81e-164 463
MS.gene019708.t1 MTR_2g069210 61.918 365 104 3 2 332 4 367 3.95e-163 459
MS.gene019708.t1 MTR_2g069300 61.473 353 101 3 15 332 6 358 9.16e-159 448
MS.gene019708.t1 MTR_8g009170 76.950 282 32 3 1 249 1 282 7.99e-150 423
MS.gene019708.t1 MTR_8g009080 59.003 361 113 4 6 332 38 397 8.19e-150 427
MS.gene019708.t1 MTR_1g043775 54.701 351 126 2 15 332 7 357 2.58e-135 389
MS.gene019708.t1 MTR_1g043810 53.561 351 130 2 15 332 7 357 3.90e-135 388
MS.gene019708.t1 MTR_1g043760 54.728 349 126 2 15 331 7 355 2.21e-134 386
MS.gene019708.t1 MTR_1g043770 55.072 345 124 2 19 332 11 355 2.41e-134 386
MS.gene019708.t1 MTR_8g041600 51.685 356 129 6 17 332 22 374 4.13e-126 366
MS.gene019708.t1 MTR_8g041620 51.124 356 131 6 17 332 22 374 9.36e-126 365
MS.gene019708.t1 MTR_8g009180 77.311 238 38 3 111 332 57 294 3.68e-124 358
MS.gene019708.t1 MTR_7g056347 48.179 357 141 4 16 332 21 373 4.13e-123 358
MS.gene019708.t1 MTR_1g093120 47.875 353 147 3 17 332 18 370 3.35e-122 356
MS.gene019708.t1 MTR_0032s0040 50.266 376 140 5 1 332 1 373 2.47e-121 354
MS.gene019708.t1 MTR_7g029655 50.000 360 134 6 15 332 15 370 2.60e-121 353
MS.gene019708.t1 MTR_1g093140 48.077 364 141 5 15 332 17 378 1.17e-120 352
MS.gene019708.t1 MTR_1g093110 47.765 358 143 5 17 332 19 374 1.42e-119 349
MS.gene019708.t1 MTR_8g006930 50.000 354 137 4 17 332 22 373 6.61e-119 347
MS.gene019708.t1 MTR_2g069010 50.000 356 138 5 16 332 21 375 1.68e-117 344
MS.gene019708.t1 MTR_4g119410 50.282 354 136 4 17 332 22 373 4.20e-117 343
MS.gene019708.t1 MTR_2g069060 50.862 348 121 4 16 332 21 349 6.65e-117 342
MS.gene019708.t1 MTR_2g068950 47.978 371 152 6 1 332 1 369 1.22e-114 337
MS.gene019708.t1 MTR_4g024660 46.023 352 154 5 17 332 22 373 2.05e-113 333
MS.gene019708.t1 MTR_8g062600 45.251 358 150 5 16 332 21 373 3.58e-113 333
MS.gene019708.t1 MTR_2g068960 47.978 371 152 6 1 332 1 369 1.15e-112 332
MS.gene019708.t1 MTR_8g063070 45.308 373 161 7 1 332 3 373 2.60e-112 331
MS.gene019708.t1 MTR_7g078010 47.740 354 145 4 17 332 22 373 1.43e-110 326
MS.gene019708.t1 MTR_7g056393 47.472 356 143 6 17 332 22 373 9.32e-109 322
MS.gene019708.t1 MTR_2g069020 47.429 350 145 6 16 328 19 366 2.00e-108 321
MS.gene019708.t1 MTR_2g069020 47.429 350 145 6 16 328 19 366 6.89e-108 320
MS.gene019708.t1 MTR_8g469400 44.444 369 153 8 3 332 5 360 4.12e-105 312
MS.gene019708.t1 MTR_8g009080 54.317 278 92 3 6 249 38 314 8.81e-102 302
MS.gene019708.t1 MTR_1g070185 44.444 351 156 4 16 332 22 367 1.04e-101 303
MS.gene019708.t1 MTR_8g009080 54.545 275 90 4 6 246 38 311 1.92e-99 297
MS.gene019708.t1 MTR_1g043775 51.916 287 104 3 15 267 7 293 9.21e-97 289
MS.gene019708.t1 MTR_1g043810 52.612 268 94 2 15 249 7 274 2.70e-95 286
MS.gene019708.t1 MTR_1g043770 54.198 262 89 2 19 249 11 272 1.98e-93 280
MS.gene019708.t1 MTR_7g056353 43.553 349 137 5 17 331 24 346 5.26e-90 278
MS.gene019708.t1 MTR_8g041600 47.426 272 103 4 17 250 22 291 6.93e-87 264
MS.gene019708.t1 MTR_7g105070 36.676 349 185 4 19 332 15 362 2.33e-81 251
MS.gene019708.t1 MTR_7g078010 47.212 269 105 3 17 250 22 288 1.04e-78 243
MS.gene019708.t1 MTR_1g032140 40.688 349 166 6 19 331 21 364 5.48e-76 238
MS.gene019708.t1 MTR_1g032220 39.828 349 169 6 19 331 28 371 2.50e-75 236
MS.gene019708.t1 MTR_2g069060 50.220 227 82 1 55 250 22 248 4.01e-75 232
MS.gene019708.t1 MTR_1g032250 38.292 363 181 7 4 330 14 369 4.10e-73 231
MS.gene019708.t1 MTR_1g043840 56.818 176 72 1 143 314 50 225 1.25e-64 207
MS.gene019708.t1 MTR_7g068650 34.454 357 181 10 19 327 6 357 2.71e-58 192
MS.gene019708.t1 MTR_2g068840 34.571 350 176 8 27 332 21 361 1.53e-54 182
MS.gene019708.t1 MTR_4g015790 35.890 326 160 10 43 327 48 365 2.29e-54 182
MS.gene019708.t1 MTR_3g092890 34.853 307 157 6 60 331 38 336 1.87e-53 179
MS.gene019708.t1 MTR_8g024120 32.595 316 174 5 51 332 33 343 6.50e-51 172
MS.gene019708.t1 MTR_2g068800 37.643 263 133 7 27 264 21 277 5.12e-50 168
MS.gene019708.t1 MTR_5g065010 31.503 346 191 11 27 332 3 342 2.43e-49 168
MS.gene019708.t1 MTR_1g062110 31.831 355 186 10 27 332 26 373 1.78e-48 167
MS.gene019708.t1 MTR_5g055820 30.548 347 191 10 27 332 12 349 2.90e-48 166
MS.gene019708.t1 MTR_5g048850 31.700 347 186 12 27 332 12 348 3.25e-48 166
MS.gene019708.t1 MTR_0009s0050 30.523 344 194 9 27 332 12 348 5.06e-48 165
MS.gene019708.t1 MTR_0009s0050 30.523 344 194 9 27 332 12 348 5.70e-48 165
MS.gene019708.t1 MTR_3g063180 31.378 341 182 10 28 323 10 343 5.94e-48 165
MS.gene019708.t1 MTR_5g055690 29.395 347 195 9 27 332 12 349 1.89e-47 164
MS.gene019708.t1 MTR_6g015950 33.444 302 155 6 56 320 35 327 2.10e-47 163
MS.gene019708.t1 MTR_5g032870 32.484 314 163 7 44 316 24 329 2.68e-47 163
MS.gene019708.t1 MTR_3g070860 29.805 359 208 7 14 331 1 356 3.95e-47 163
MS.gene019708.t1 MTR_5g055680 31.962 316 170 7 55 332 40 348 6.77e-47 162
MS.gene019708.t1 MTR_5g082750 33.651 315 166 7 56 331 45 355 1.13e-46 162
MS.gene019708.t1 MTR_5g048570 28.198 344 200 8 27 332 12 346 1.34e-46 161
MS.gene019708.t1 MTR_1g034120 30.650 323 165 8 45 314 14 330 1.92e-46 161
MS.gene019708.t1 MTR_3g091350 30.854 363 193 11 4 327 13 356 2.46e-46 161
MS.gene019708.t1 MTR_7g102820 31.285 358 174 13 23 319 21 367 2.74e-46 161
MS.gene019708.t1 MTR_1g070135 31.677 322 175 9 46 331 26 338 4.70e-46 159
MS.gene019708.t1 MTR_2g072910 28.406 345 202 8 27 332 16 354 5.36e-46 160
MS.gene019708.t1 MTR_1g034140 33.232 328 152 12 60 332 27 342 5.59e-46 159
MS.gene019708.t1 MTR_5g055800 30.321 343 195 8 27 332 12 347 8.66e-46 159
MS.gene019708.t1 MTR_5g055900 30.058 346 193 10 27 332 12 348 1.25e-45 159
MS.gene019708.t1 MTR_3g091360 32.907 313 167 10 39 313 28 335 1.26e-45 159
MS.gene019708.t1 MTR_3g045230 33.141 347 182 8 27 332 17 354 2.14e-45 158
MS.gene019708.t1 MTR_0328s0030 29.915 351 187 9 27 332 10 346 2.55e-45 158
MS.gene019708.t1 MTR_1g034060 30.031 323 167 8 45 314 14 330 3.15e-45 157
MS.gene019708.t1 MTR_7g102720 33.754 317 158 9 55 332 32 335 3.37e-45 157
MS.gene019708.t1 MTR_1g070120 33.548 310 163 9 57 330 35 337 4.56e-45 157
MS.gene019708.t1 MTR_4g087100 29.630 351 181 8 41 332 7 350 4.60e-45 157
MS.gene019708.t1 MTR_5g032880 33.333 315 159 8 44 320 24 325 8.94e-45 162
MS.gene019708.t1 MTR_5g032880 32.595 316 169 8 44 320 362 672 1.06e-44 162
MS.gene019708.t1 MTR_2g072890 27.795 331 185 7 46 332 35 355 1.69e-44 156
MS.gene019708.t1 MTR_0009s0480 32.174 345 187 10 27 332 11 347 1.71e-44 155
MS.gene019708.t1 MTR_3g043900 32.370 346 185 8 27 332 17 353 2.89e-44 155
MS.gene019708.t1 MTR_4g087110 29.345 351 184 10 40 332 6 350 4.78e-44 154
MS.gene019708.t1 MTR_1g070085 30.556 324 177 7 46 331 25 338 5.42e-44 154
MS.gene019708.t1 MTR_1g070085 30.556 324 177 7 46 331 25 338 5.42e-44 154
MS.gene019708.t1 MTR_5g048740 29.915 351 188 10 27 332 10 347 2.07e-43 153
MS.gene019708.t1 MTR_5g048550 28.614 339 197 9 27 327 12 343 6.59e-42 149
MS.gene019708.t1 MTR_5g048470 28.060 335 198 8 27 323 17 346 9.97e-42 149
MS.gene019708.t1 MTR_7g063730 29.254 335 189 10 38 332 39 365 2.20e-41 148
MS.gene019708.t1 MTR_8g064200 27.844 334 199 7 27 323 17 345 2.38e-41 147
MS.gene019708.t1 MTR_2g025120 31.488 289 161 8 60 316 4 287 2.41e-41 146
MS.gene019708.t1 MTR_2g083030 29.861 288 159 5 57 312 34 310 2.44e-41 147
MS.gene019708.t1 MTR_8g064200 27.844 334 199 7 27 323 22 350 2.51e-41 147
MS.gene019708.t1 MTR_1g033810 29.861 288 163 6 60 312 47 330 5.51e-41 147
MS.gene019708.t1 MTR_7g016090 32.781 302 158 8 55 320 36 328 1.01e-40 145
MS.gene019708.t1 MTR_7g016090 32.781 302 158 8 55 320 34 326 1.12e-40 145
MS.gene019708.t1 MTR_4g087120 29.375 320 166 8 40 305 6 319 1.89e-40 145
MS.gene019708.t1 MTR_4g087090 29.766 299 161 5 60 312 30 325 2.10e-40 145
MS.gene019708.t1 MTR_1g070080 29.904 311 171 8 60 332 38 339 4.43e-40 144
MS.gene019708.t1 MTR_5g085330 32.082 293 160 9 60 318 5 292 6.94e-40 143
MS.gene019708.t1 MTR_3g083370 31.944 288 159 9 60 316 4 285 9.73e-40 142
MS.gene019708.t1 MTR_8g075890 31.655 278 145 7 41 277 19 292 1.02e-39 143
MS.gene019708.t1 MTR_8g075830 30.855 269 145 7 48 277 26 292 1.55e-39 143
MS.gene019708.t1 MTR_3g088565 31.353 303 160 11 59 321 2 296 2.48e-39 141
MS.gene019708.t1 MTR_4g093840 31.392 309 172 8 60 332 62 366 3.45e-39 142
MS.gene019708.t1 MTR_5g022020 31.502 273 150 5 42 277 20 292 3.77e-39 142
MS.gene019708.t1 MTR_3g058610 32.331 266 139 7 51 277 29 292 4.10e-39 142
MS.gene019708.t1 MTR_7g451860 31.707 287 151 7 60 312 41 316 7.96e-39 140
MS.gene019708.t1 MTR_7g047670 31.707 287 151 7 60 312 41 316 7.96e-39 140
MS.gene019708.t1 MTR_2g102570 32.343 303 146 11 56 314 48 335 2.62e-38 140
MS.gene019708.t1 MTR_4g087140 28.834 326 170 10 36 305 1 320 3.01e-38 139
MS.gene019708.t1 MTR_7g062580 27.660 329 190 10 27 315 19 339 3.36e-38 139
MS.gene019708.t1 MTR_7g062570 27.485 342 194 10 27 325 19 349 3.70e-38 139
MS.gene019708.t1 MTR_5g059130 29.795 292 159 5 60 313 44 327 5.12e-38 138
MS.gene019708.t1 MTR_7g062560 28.852 305 179 9 56 332 59 353 9.05e-38 138
MS.gene019708.t1 MTR_0009s0050 33.333 228 142 5 111 332 27 250 1.11e-37 135
MS.gene019708.t1 MTR_0009s0050 33.333 228 142 5 111 332 27 250 1.23e-37 135
MS.gene019708.t1 MTR_5g005570 32.192 292 158 8 51 312 28 309 1.31e-37 137
MS.gene019708.t1 MTR_7g016080 30.132 302 158 8 55 320 36 320 5.70e-37 135
MS.gene019708.t1 MTR_2g083000 31.818 286 149 7 60 312 33 305 6.38e-37 135
MS.gene019708.t1 MTR_2g437380 27.564 312 182 9 60 332 50 356 4.62e-36 134
MS.gene019708.t1 MTR_1g048940 30.990 313 169 10 60 332 45 350 9.25e-36 133
MS.gene019708.t1 MTR_1g062110 32.234 273 132 9 27 250 26 294 1.34e-35 131
MS.gene019708.t1 MTR_0009s0050 40.816 147 81 3 188 332 26 168 2.23e-35 127
MS.gene019708.t1 MTR_7g062600 28.479 309 171 10 57 325 48 346 3.09e-35 131
MS.gene019708.t1 MTR_5g059140 29.617 287 146 7 60 302 42 316 4.81e-35 130
MS.gene019708.t1 MTR_5g011250 30.612 294 162 8 60 313 47 338 5.11e-35 130
MS.gene019708.t1 MTR_1g070085 32.877 219 135 3 119 331 48 260 7.38e-35 128
MS.gene019708.t1 MTR_1g102070 31.118 331 176 10 22 304 16 342 8.18e-35 130
MS.gene019708.t1 MTR_3g040410 30.952 252 139 7 59 277 5 254 8.28e-35 129
MS.gene019708.t1 MTR_3g026150 29.139 302 171 9 57 322 57 351 1.62e-34 129
MS.gene019708.t1 MTR_1g044105 40.000 165 61 2 15 141 7 171 2.77e-34 124
MS.gene019708.t1 MTR_3g072820 28.767 292 162 5 60 313 42 325 2.78e-34 128
MS.gene019708.t1 MTR_1g070100 33.333 219 134 3 119 331 44 256 4.52e-34 126
MS.gene019708.t1 MTR_0056s0160 34.419 215 131 6 117 325 16 226 7.46e-34 124
MS.gene019708.t1 MTR_4g074130 30.827 266 133 7 60 284 40 295 1.16e-33 127
MS.gene019708.t1 MTR_6g464620 30.565 301 163 7 47 304 50 347 2.25e-33 127
MS.gene019708.t1 MTR_1g070135 32.780 241 120 8 46 250 26 260 2.44e-33 125
MS.gene019708.t1 MTR_7g062550 25.581 344 212 7 27 332 24 361 7.54e-33 125
MS.gene019708.t1 MTR_7g056370 35.979 189 82 4 18 170 2 187 1.03e-32 121
MS.gene019708.t1 MTR_1g011580 28.479 309 159 10 60 327 63 350 1.49e-32 124
MS.gene019708.t1 MTR_7g081710 27.914 326 190 9 30 316 16 335 1.99e-32 124
MS.gene019708.t1 MTR_1g032240 37.379 206 99 3 127 331 1 177 5.03e-32 118
MS.gene019708.t1 MTR_1g081840 28.239 301 169 6 47 304 40 336 4.33e-31 120
MS.gene019708.t1 MTR_0009s0480 32.830 265 135 9 27 253 11 270 4.43e-31 118
MS.gene019708.t1 MTR_8g008960 67.568 74 24 0 259 332 29 102 4.60e-31 113
MS.gene019708.t1 MTR_3g096500 29.371 286 157 6 61 304 67 349 4.97e-31 120
MS.gene019708.t1 MTR_2g070870 29.630 297 160 9 53 312 21 305 5.99e-31 119
MS.gene019708.t1 MTR_8g033380 29.720 286 157 5 60 304 54 336 1.40e-30 119
MS.gene019708.t1 MTR_5g055690 28.409 264 144 7 27 250 12 270 1.79e-30 117
MS.gene019708.t1 MTR_3g464530 31.179 263 120 9 60 278 34 279 2.41e-30 117
MS.gene019708.t1 MTR_8g074050 28.205 312 176 12 60 332 52 354 6.72e-30 117
MS.gene019708.t1 MTR_4g116010 27.000 300 170 8 60 319 50 340 8.17e-30 117
MS.gene019708.t1 MTR_7g045650 28.261 276 153 7 27 262 24 294 9.80e-30 116
MS.gene019708.t1 MTR_5g048850 31.698 265 135 10 27 251 12 270 1.49e-29 114
MS.gene019708.t1 MTR_3g117420 27.090 299 167 10 60 317 52 340 2.24e-29 115
MS.gene019708.t1 MTR_3g088745 27.070 314 180 7 61 330 37 345 6.16e-29 114
MS.gene019708.t1 MTR_2g019370 27.759 299 157 9 60 312 28 313 1.48e-28 113
MS.gene019708.t1 MTR_3g072810 28.182 330 178 10 28 312 6 321 1.52e-28 113
MS.gene019708.t1 MTR_4g087130 27.445 317 175 7 40 305 6 318 3.80e-28 112
MS.gene019708.t1 MTR_2g025120 29.730 222 123 6 60 250 4 223 9.84e-28 108
MS.gene019708.t1 MTR_0009s0400 36.301 146 89 2 188 332 2 144 1.06e-27 105
MS.gene019708.t1 MTR_3g026150 30.660 212 137 6 117 322 41 248 1.55e-27 108
MS.gene019708.t1 MTR_8g074070 27.010 311 181 11 60 332 52 354 1.67e-27 110
MS.gene019708.t1 MTR_8g461330 27.726 321 167 11 60 331 27 331 2.45e-27 109
MS.gene019708.t1 MTR_2g437380 28.700 223 148 5 117 332 44 262 4.98e-27 107
MS.gene019708.t1 MTR_5g025050 27.778 288 164 10 59 314 4 279 9.89e-27 107
MS.gene019708.t1 MTR_6g092620 28.346 254 145 7 59 278 2 252 2.72e-26 106
MS.gene019708.t1 MTR_8g093930 25.667 300 180 6 60 319 47 343 3.74e-26 107
MS.gene019708.t1 MTR_2g072910 27.444 266 151 7 27 253 16 278 4.02e-26 105
MS.gene019708.t1 MTR_5g025090 25.902 305 182 9 60 332 5 297 9.82e-26 104
MS.gene019708.t1 MTR_5g027230 27.682 289 165 10 56 312 2 278 1.36e-25 104
MS.gene019708.t1 MTR_3g083370 29.279 222 124 6 60 250 4 223 1.64e-25 102
MS.gene019708.t1 MTR_8g030880 27.425 299 176 6 57 317 2 297 2.05e-25 104
MS.gene019708.t1 MTR_4g123020 27.211 294 163 10 59 312 19 301 3.05e-25 103
MS.gene019708.t1 MTR_5g025060 28.302 265 169 9 56 312 2 253 3.86e-25 102
MS.gene019708.t1 MTR_4g099380 36.420 162 57 5 19 142 129 282 3.97e-25 102
MS.gene019708.t1 MTR_8g074070 29.110 292 180 13 60 332 52 335 8.98e-25 102
MS.gene019708.t1 MTR_1g086550 28.221 326 168 12 60 332 20 332 1.27e-24 102
MS.gene019708.t1 MTR_7g077670 28.136 295 167 7 60 317 11 297 1.65e-24 102
MS.gene019708.t1 MTR_8g093980 27.129 317 179 11 60 329 59 370 9.66e-24 100
MS.gene019708.t1 MTR_3g117485 24.916 297 176 9 60 316 49 338 2.33e-23 99.4
MS.gene019708.t1 MTR_4g132770 44.681 94 51 1 190 282 32 125 2.60e-23 94.7
MS.gene019708.t1 MTR_4g099390 51.190 84 39 1 251 332 1 84 9.88e-23 90.9
MS.gene019708.t1 MTR_3g464530 29.412 238 108 8 57 250 31 252 2.82e-22 94.4
MS.gene019708.t1 MTR_2g033270 30.469 256 139 10 58 277 13 265 5.30e-22 95.1
MS.gene019708.t1 MTR_3g026150 28.696 230 124 7 57 250 57 282 5.84e-22 94.4
MS.gene019708.t1 MTR_5g024940 27.875 287 148 11 56 312 2 259 1.60e-21 92.8
MS.gene019708.t1 MTR_1g070110 30.601 183 93 3 134 316 70 218 1.66e-21 92.0
MS.gene019708.t1 MTR_3g117485 30.337 178 115 5 142 316 95 266 8.93e-21 90.9
MS.gene019708.t1 MTR_4g115990 25.000 296 189 9 48 319 33 319 5.48e-20 89.4
MS.gene019708.t1 MTR_1g027290 27.931 290 156 11 60 304 29 310 3.76e-19 87.0
MS.gene019708.t1 MTR_8g102600 26.367 311 161 10 62 314 11 311 4.00e-19 87.0
MS.gene019708.t1 MTR_6g088665 26.861 309 164 11 62 314 20 322 5.35e-18 84.0
MS.gene019708.t1 MTR_7g084360 37.126 167 55 3 140 302 7 127 5.93e-18 79.3
MS.gene019708.t1 MTR_6g088665 26.774 310 164 11 62 314 20 323 7.14e-18 83.6
MS.gene019708.t1 MTR_8g102600 29.798 198 126 5 126 314 68 261 2.47e-17 81.3
MS.gene019708.t1 MTR_2g069070 31.646 158 61 2 16 142 21 162 2.64e-17 79.3
MS.gene019708.t1 MTR_4g096840 25.658 304 167 12 56 312 22 313 2.23e-16 79.0
MS.gene019708.t1 MTR_3g040440 46.154 65 35 0 199 263 14 78 1.19e-15 75.9
MS.gene019708.t1 MTR_4g100600 24.272 309 178 9 52 313 1 300 8.10e-13 68.6
MS.gene019708.t1 MTR_2g068850 41.176 85 47 2 27 110 21 103 8.82e-13 67.0
MS.gene019708.t1 MTR_3g108520 22.483 298 185 9 60 315 7 300 8.39e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019708.t1 AT1G06650 56.461 356 116 5 16 332 14 369 1.44e-140 402
MS.gene019708.t1 AT1G06620 54.598 348 124 2 19 332 18 365 3.73e-138 396
MS.gene019708.t1 AT5G59540 53.824 353 126 2 17 332 14 366 1.15e-137 395
MS.gene019708.t1 AT5G59530 53.955 354 123 3 17 332 13 364 4.91e-135 388
MS.gene019708.t1 AT1G06640 53.444 363 129 6 9 332 8 369 1.27e-131 380
MS.gene019708.t1 AT1G04350 52.260 354 129 4 16 332 10 360 5.53e-130 375
MS.gene019708.t1 AT1G06645 52.162 370 130 8 4 332 16 379 5.20e-126 366
MS.gene019708.t1 AT5G43440 51.117 358 132 6 15 332 11 365 6.27e-126 365
MS.gene019708.t1 AT2G30840 52.394 355 130 5 16 332 9 362 6.52e-124 360
MS.gene019708.t1 AT1G04380 49.570 349 128 5 16 332 13 345 4.67e-121 352
MS.gene019708.t1 AT2G30830 51.143 350 136 5 17 332 10 358 3.74e-119 348
MS.gene019708.t1 AT5G43450 48.045 358 140 5 15 332 11 362 1.24e-118 347
MS.gene019708.t1 AT2G30840 51.268 355 128 6 16 332 9 356 7.40e-118 344
MS.gene019708.t1 AT1G03410 47.042 355 149 4 16 332 8 361 3.06e-117 343
MS.gene019708.t1 AT1G03410 47.042 355 149 4 16 332 45 398 1.24e-116 343
MS.gene019708.t1 AT3G61400 47.581 372 148 9 5 332 2 370 9.87e-115 337
MS.gene019708.t1 AT2G25450 49.148 352 143 5 16 332 9 359 3.73e-112 330
MS.gene019708.t1 AT1G03400 48.169 355 135 6 16 332 8 351 1.30e-110 326
MS.gene019708.t1 AT1G03400 44.909 383 134 8 16 332 8 379 3.37e-104 310
MS.gene019708.t1 AT5G59540 51.661 271 94 2 17 250 14 284 1.96e-97 290
MS.gene019708.t1 AT1G06620 52.830 265 91 2 19 249 18 282 1.23e-96 288
MS.gene019708.t1 AT1G06650 52.747 273 91 4 16 250 14 286 2.14e-95 286
MS.gene019708.t1 AT1G06640 50.000 286 104 5 9 256 8 292 5.65e-93 280
MS.gene019708.t1 AT1G06640 50.714 280 99 5 9 250 8 286 1.33e-91 275
MS.gene019708.t1 AT2G30840 50.923 271 96 3 16 249 9 279 1.62e-91 275
MS.gene019708.t1 AT5G43440 49.455 275 96 6 15 249 11 282 1.01e-90 273
MS.gene019708.t1 AT5G43450 46.429 280 108 5 15 256 11 286 5.43e-86 261
MS.gene019708.t1 AT1G04380 46.442 267 95 5 16 250 13 263 2.61e-81 248
MS.gene019708.t1 AT3G61400 45.675 289 112 7 5 250 2 288 1.24e-80 247
MS.gene019708.t1 AT3G13610 35.714 350 167 10 27 332 26 361 1.02e-60 198
MS.gene019708.t1 AT1G55290 33.623 345 172 8 27 327 25 356 5.57e-57 189
MS.gene019708.t1 AT4G10500 34.853 307 160 5 60 331 44 345 1.40e-54 182
MS.gene019708.t1 AT4G10490 34.091 308 162 6 60 331 42 344 5.89e-53 178
MS.gene019708.t1 AT3G12900 34.421 337 179 8 27 327 21 351 1.10e-51 175
MS.gene019708.t1 AT5G24530 32.026 306 168 4 60 330 38 338 3.51e-50 170
MS.gene019708.t1 AT2G36690 32.764 351 188 8 25 332 18 363 7.42e-50 170
MS.gene019708.t1 AT2G36690 32.764 351 188 8 25 332 18 363 7.42e-50 170
MS.gene019708.t1 AT2G38240 32.670 352 182 10 21 327 5 346 1.57e-49 169
MS.gene019708.t1 AT5G05600 32.468 308 167 6 56 325 58 362 1.72e-48 167
MS.gene019708.t1 AT3G11180 31.193 327 176 7 41 330 82 396 1.51e-47 165
MS.gene019708.t1 AT3G11180 31.988 322 170 7 41 325 82 391 1.59e-47 165
MS.gene019708.t1 AT3G19010 32.886 298 149 7 55 305 23 316 4.41e-46 160
MS.gene019708.t1 AT3G19010 32.886 298 149 7 55 305 23 316 4.41e-46 160
MS.gene019708.t1 AT3G55970 34.323 303 154 9 59 320 51 349 1.53e-45 159
MS.gene019708.t1 AT3G19000 31.231 333 173 8 30 312 2 328 2.94e-45 158
MS.gene019708.t1 AT4G25310 32.753 287 157 7 79 332 70 353 3.45e-45 157
MS.gene019708.t1 AT4G25300 30.368 326 185 8 40 327 30 351 9.26e-45 157
MS.gene019708.t1 AT1G17020 29.341 334 189 9 40 332 31 358 1.50e-43 153
MS.gene019708.t1 AT1G17010 28.916 332 193 8 40 332 31 358 5.71e-43 152
MS.gene019708.t1 AT1G78550 29.712 313 177 7 57 332 50 356 7.71e-43 151
MS.gene019708.t1 AT1G77330 31.955 266 136 7 59 285 2 261 2.91e-42 149
MS.gene019708.t1 AT4G21200 32.394 284 149 9 60 312 42 313 5.72e-42 149
MS.gene019708.t1 AT4G16330 29.841 315 152 8 60 327 67 359 7.18e-42 149
MS.gene019708.t1 AT3G19010 33.217 286 134 10 55 305 23 286 3.20e-41 146
MS.gene019708.t1 AT3G21420 30.226 354 190 12 28 332 17 362 1.10e-39 143
MS.gene019708.t1 AT3G51240 31.673 281 154 6 35 277 11 291 1.49e-39 143
MS.gene019708.t1 AT1G62380 32.806 253 137 6 60 281 7 257 1.82e-39 142
MS.gene019708.t1 AT1G15550 30.556 324 169 13 35 313 26 338 6.94e-38 139
MS.gene019708.t1 AT1G05010 32.946 258 137 8 60 284 4 258 1.71e-37 137
MS.gene019708.t1 AT4G22880 31.081 296 162 9 60 315 47 340 1.74e-37 137
MS.gene019708.t1 AT4G22880 31.081 296 162 9 60 315 47 340 1.74e-37 137
MS.gene019708.t1 AT4G22880 31.081 296 162 9 60 315 47 340 1.74e-37 137
MS.gene019708.t1 AT1G12010 31.496 254 139 7 60 281 7 257 3.48e-37 135
MS.gene019708.t1 AT5G08640 31.081 296 150 8 59 312 42 325 3.86e-37 136
MS.gene019708.t1 AT5G08640 31.081 296 150 8 59 312 42 325 3.86e-37 136
MS.gene019708.t1 AT1G78550 29.032 279 156 6 91 332 5 278 7.71e-36 131
MS.gene019708.t1 AT4G16330 33.784 222 136 4 110 327 39 253 2.61e-35 129
MS.gene019708.t1 AT3G19000 29.749 279 143 7 30 258 2 277 1.32e-33 125
MS.gene019708.t1 AT4G25420 30.576 278 149 5 60 296 61 335 2.92e-33 126
MS.gene019708.t1 AT2G44800 29.794 339 190 12 21 318 9 340 9.90e-33 125
MS.gene019708.t1 AT5G63590 30.822 292 155 7 60 312 14 297 1.25e-32 123
MS.gene019708.t1 AT5G12270 29.745 353 192 12 25 332 18 359 1.71e-32 124
MS.gene019708.t1 AT1G60980 31.835 267 133 7 60 279 57 321 2.68e-32 124
MS.gene019708.t1 AT1G80330 29.470 302 149 10 60 313 49 334 3.08e-32 123
MS.gene019708.t1 AT5G05600 31.760 233 121 5 56 250 58 290 4.05e-32 121
MS.gene019708.t1 AT5G63600 29.655 290 156 9 60 313 33 310 9.27e-32 121
MS.gene019708.t1 AT5G20400 30.508 295 163 7 60 317 45 334 1.16e-31 122
MS.gene019708.t1 AT4G25300 35.106 188 117 3 142 327 73 257 1.31e-31 119
MS.gene019708.t1 AT3G19010 30.894 246 122 6 55 253 23 267 2.03e-31 120
MS.gene019708.t1 AT1G80340 28.704 324 170 10 40 314 21 332 1.49e-30 119
MS.gene019708.t1 AT3G55970 34.764 233 110 8 59 250 51 282 1.69e-30 117
MS.gene019708.t1 AT4G25310 27.972 286 144 7 79 332 70 325 1.94e-30 118
MS.gene019708.t1 AT5G63600 29.553 291 156 10 60 313 33 311 2.06e-30 118
MS.gene019708.t1 AT1G30040 29.667 300 154 10 56 312 27 312 3.35e-30 117
MS.gene019708.t1 AT5G51810 30.153 262 136 5 60 279 63 319 4.53e-30 118
MS.gene019708.t1 AT2G19590 30.400 250 140 7 60 278 11 257 5.27e-29 114
MS.gene019708.t1 AT3G60290 28.834 326 184 12 31 315 19 337 1.24e-28 114
MS.gene019708.t1 AT5G07480 27.362 307 170 10 55 316 39 337 1.35e-28 113
MS.gene019708.t1 AT4G21690 28.788 330 157 10 56 331 43 348 1.78e-28 113
MS.gene019708.t1 AT5G07200 28.723 282 153 7 60 297 58 335 1.96e-28 113
MS.gene019708.t1 AT1G50960 27.018 285 166 7 60 312 40 314 3.47e-28 112
MS.gene019708.t1 AT3G51240 34.337 166 103 2 118 277 42 207 1.02e-27 109
MS.gene019708.t1 AT2G34555 29.293 297 152 11 59 312 26 307 3.09e-26 107
MS.gene019708.t1 AT1G78440 28.523 298 157 10 59 312 17 302 7.72e-26 105
MS.gene019708.t1 AT1G49390 26.552 290 172 6 60 313 45 329 1.33e-25 105
MS.gene019708.t1 AT5G20550 28.425 292 165 8 60 313 45 330 1.36e-25 105
MS.gene019708.t1 AT5G63595 28.514 249 127 7 56 273 21 249 6.22e-25 102
MS.gene019708.t1 AT1G44090 28.626 262 144 6 60 279 63 323 2.64e-24 102
MS.gene019708.t1 AT5G54000 26.599 297 175 8 60 317 46 338 3.56e-24 101
MS.gene019708.t1 AT4G25420 29.741 232 122 4 60 250 61 292 7.58e-24 99.8
MS.gene019708.t1 AT4G23340 28.159 277 147 9 85 318 30 297 1.70e-23 99.4
MS.gene019708.t1 AT5G51810 29.237 236 120 5 60 253 63 293 2.10e-23 98.6
MS.gene019708.t1 AT5G58660 27.667 300 133 13 60 289 34 319 6.43e-23 98.2
MS.gene019708.t1 AT1G14130 27.562 283 161 10 59 308 8 279 2.23e-22 95.9
MS.gene019708.t1 AT1G47990 28.475 295 159 13 60 312 15 299 6.29e-22 94.7
MS.gene019708.t1 AT5G07480 31.053 190 119 6 134 316 44 228 1.16e-21 92.4
MS.gene019708.t1 AT3G47190 25.000 252 128 9 60 263 32 270 3.54e-21 92.8
MS.gene019708.t1 AT1G02400 28.814 295 159 14 60 312 24 309 8.23e-21 91.7
MS.gene019708.t1 AT1G49390 28.922 204 134 5 116 313 52 250 9.38e-21 90.5
MS.gene019708.t1 AT5G54000 29.858 211 135 7 116 317 52 258 1.19e-20 90.1
MS.gene019708.t1 AT4G23340 31.319 182 114 5 145 318 1 179 1.51e-20 88.6
MS.gene019708.t1 AT5G43935 26.298 289 154 9 60 313 19 283 4.22e-20 89.4
MS.gene019708.t1 AT5G51310 25.574 305 174 10 60 318 5 302 1.18e-19 88.6
MS.gene019708.t1 AT2G19590 28.899 218 123 6 92 278 26 242 1.36e-19 87.8
MS.gene019708.t1 AT1G30040 28.151 238 117 9 56 250 27 253 4.46e-19 85.9
MS.gene019708.t1 AT5G63580 27.350 234 121 6 57 250 16 240 7.67e-19 84.7
MS.gene019708.t1 AT5G63580 27.586 232 119 6 57 248 16 238 7.73e-19 84.7
MS.gene019708.t1 AT2G06960 39.683 126 59 3 190 315 33 141 8.40e-19 82.0
MS.gene019708.t1 AT5G58660 26.667 255 109 12 60 250 34 274 6.95e-16 77.0
MS.gene019708.t1 AT3G50210 24.643 280 152 8 60 280 8 287 1.49e-15 76.6
MS.gene019708.t1 AT3G50210 24.643 280 152 8 60 280 8 287 1.49e-15 76.6
MS.gene019708.t1 AT3G50210 24.643 280 152 8 60 280 8 287 1.49e-15 76.6
MS.gene019708.t1 AT3G49620 24.451 319 182 8 51 315 25 338 2.25e-15 76.6
MS.gene019708.t1 AT3G49630 24.382 283 160 6 52 280 1 283 8.60e-15 74.7
MS.gene019708.t1 AT3G49630 24.400 250 143 5 77 280 30 279 1.65e-13 70.9
MS.gene019708.t1 AT3G50210 29.221 154 101 4 134 280 53 205 2.20e-11 63.5
MS.gene019708.t1 AT4G22870 30.928 97 65 2 219 315 2 96 2.42e-11 60.5
MS.gene019708.t1 AT3G46500 35.294 119 68 3 201 314 60 174 6.80e-11 61.2
MS.gene019708.t1 AT3G49630 28.188 149 104 3 134 280 63 210 9.58e-11 62.0

Find 75 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGGTTTCTCTGTATA+TGG 0.236260 8.1:+73203710 None:intergenic
ATAGCTCACCAGCACTTAAT+TGG 0.240215 8.1:-73205879 MS.gene019708:intron
GTTGTTCCCACAGTCAATTC+TGG 0.240799 8.1:+73204994 None:intergenic
AAGTCCTTTATCAGGATAAA+TGG 0.250135 8.1:-73204912 MS.gene019708:CDS
GAACTATTGTCAGAAGCTTT+AGG 0.272915 8.1:-73205099 MS.gene019708:CDS
GGAAAATACATGAGAAATCT+AGG 0.290240 8.1:-73205135 MS.gene019708:CDS
TCTGATAAGAGTTCCTTTAT+AGG 0.292777 8.1:+73203744 None:intergenic
GAAACAAAAGCTGGTGTAAA+AGG 0.293999 8.1:-73206240 MS.gene019708:CDS
TCTTCTGGTTTGGGAGTATC+AGG 0.295482 8.1:+73205829 None:intergenic
ATCAGGTTGATGATGGAATA+AGG 0.321050 8.1:+73206185 None:intergenic
TAGGCTAACTCATATTTATC+AGG 0.330157 8.1:+73206168 None:intergenic
TCCAAACCATCTAAAAGATA+TGG 0.330391 8.1:-73205070 MS.gene019708:CDS
AAACATGCAACAGATATTCT+TGG 0.354935 8.1:+73203807 None:intergenic
TATAGGAATATCTTCTGGTT+TGG 0.355865 8.1:+73205819 None:intergenic
TGGCCTCCAAGTCCTTTATC+AGG 0.357107 8.1:-73204920 MS.gene019708:CDS
CAATCCATTTATCCTGATAA+AGG 0.360668 8.1:+73204908 None:intergenic
AATAACATGGCTTGTGTTGT+AGG 0.361872 8.1:+73206149 None:intergenic
AGAGATATATTGCTAGAATA+TGG 0.365002 8.1:-73205156 MS.gene019708:CDS
ATAGGAATATCTTCTGGTTT+GGG 0.365035 8.1:+73205820 None:intergenic
ATTGATATTACACCTGTTCC+TGG 0.370717 8.1:-73204889 MS.gene019708:CDS
AAAGCTCTATGGACCTATAA+AGG 0.376551 8.1:-73203757 MS.gene019708:CDS
AGGTCATCCTCAAAGCTCTA+TGG 0.380218 8.1:-73203768 MS.gene019708:CDS
CCCACAGTCAATTCTGGTTC+AGG 0.384551 8.1:+73205000 None:intergenic
AGTTGAAAGATGGTGTTAAG+AGG 0.407849 8.1:-73205990 MS.gene019708:intron
CATATTTATCAGGTTGATGA+TGG 0.411678 8.1:+73206178 None:intergenic
TTTGAAGCAAAAGGACTAGA+TGG 0.430907 8.1:-73203669 MS.gene019708:CDS
CATACTATAGGAATATCTTC+TGG 0.435826 8.1:+73205814 None:intergenic
GGACTTGGAGGCCACCAATA+TGG 0.451469 8.1:+73204929 None:intergenic
ATTTATCCTGATAAAGGACT+TGG 0.457503 8.1:+73204914 None:intergenic
GTGCTTCTCCAAGACCATAT+TGG 0.458917 8.1:-73204943 MS.gene019708:CDS
TACATATACCTGCATACTAT+AGG 0.463744 8.1:+73205802 None:intergenic
TATAGGTCCATAGAGCTTTG+AGG 0.468817 8.1:+73203761 None:intergenic
GTAGCCTACTTTGAAGCAAA+AGG 0.470831 8.1:-73203678 MS.gene019708:CDS
GAAATCATTATCAGAATGCT+TGG 0.474772 8.1:+73204972 None:intergenic
ACTATGAGAGCTCCAGGAAC+AGG 0.475780 8.1:+73204877 None:intergenic
CAGGACAAGGAGGATAATAA+TGG 0.480372 8.1:+73205019 None:intergenic
GTTCATTCAATATAGAATCA+AGG 0.486469 8.1:+73206277 None:intergenic
GCTGAAGGACTACTTGCTCT+TGG 0.489070 8.1:-73205042 MS.gene019708:CDS
GGTTGATGATGGAATAAGGT+AGG 0.489286 8.1:+73206189 None:intergenic
TTCAATATAGAATCAAGGTT+AGG 0.490953 8.1:+73206282 None:intergenic
GGAGGCCACCAATATGGTCT+TGG 0.505190 8.1:+73204935 None:intergenic
AAAGATATGGATTGTGCTGA+AGG 0.509848 8.1:-73205057 MS.gene019708:CDS
ACTGAGGTTTCTCTGTATAT+GGG 0.509984 8.1:+73203711 None:intergenic
TATCCTGATAAAGGACTTGG+AGG 0.513683 8.1:+73204917 None:intergenic
AACTCCTCAAGAACACTCAA+AGG 0.516232 8.1:+73206009 None:intergenic
TGAAGGAAGCATGTGAAACA+TGG 0.519753 8.1:-73206062 MS.gene019708:CDS
TATAGAATCAAGGTTAGGCT+TGG 0.520854 8.1:+73206287 None:intergenic
ACTCCTCAAGAACACTCAAA+GGG 0.527377 8.1:+73206010 None:intergenic
GTCAATTCTGGTTCAGGACA+AGG 0.531294 8.1:+73205006 None:intergenic
ACATTAACTATGAGAGCTCC+AGG 0.533138 8.1:+73204871 None:intergenic
AAGATATTCCTATAGTATGC+AGG 0.538473 8.1:-73205810 MS.gene019708:intron
GTATCCCTCCAATTAAGTGC+TGG 0.539300 8.1:+73205871 None:intergenic
GAAAATACATGAGAAATCTA+GGG 0.542913 8.1:-73205134 MS.gene019708:CDS
GGAGCTCTCATAGTTAATGT+TGG 0.545513 8.1:-73204868 MS.gene019708:CDS
AATCCCTTTGAGTGTTCTTG+AGG 0.545874 8.1:-73206013 MS.gene019708:CDS
GCTCACCAGCACTTAATTGG+AGG 0.561497 8.1:-73205876 MS.gene019708:CDS
GTTCTTGAGGAGTTGAAAGA+TGG 0.561567 8.1:-73206000 MS.gene019708:CDS
ATATCTGCAAGGTCTATGAC+AGG 0.576610 8.1:+73206126 None:intergenic
GCATTTGATGAAACAAAAGC+TGG 0.578863 8.1:-73206249 MS.gene019708:CDS
GTTGATGATGGAATAAGGTA+GGG 0.587595 8.1:+73206190 None:intergenic
GAAGGAAGCATGTGAAACAT+GGG 0.587598 8.1:-73206061 MS.gene019708:CDS
GTAAAAGGCCTTGTTGATGA+AGG 0.592109 8.1:-73206225 MS.gene019708:CDS
CTTTGTTATCAATATCTGCA+AGG 0.600509 8.1:+73206115 None:intergenic
AGAGTTCTTGCAAATCATGT+TGG 0.604388 8.1:-73203831 MS.gene019708:CDS
CTTCTCCAAGACCATATTGG+TGG 0.609639 8.1:-73204940 MS.gene019708:CDS
CTCACCAGCACTTAATTGGA+GGG 0.611496 8.1:-73205875 MS.gene019708:CDS
GAGGTTTCTCTGTATATGGG+AGG 0.624750 8.1:+73203714 None:intergenic
TCTTAAGTCCTTCATCAACA+AGG 0.630268 8.1:+73206217 None:intergenic
GGCTACATAGTCAGCAACTG+AGG 0.637395 8.1:+73203695 None:intergenic
TCCTGAACCAGAATTGACTG+TGG 0.682984 8.1:-73205001 MS.gene019708:CDS
GGTCTATGACAGGAATAACA+TGG 0.684175 8.1:+73206136 None:intergenic
AAGGAAGCATGTGAAACATG+GGG 0.690006 8.1:-73206060 MS.gene019708:CDS
CCTGAACCAGAATTGACTGT+GGG 0.714206 8.1:-73205000 MS.gene019708:CDS
AATTCTGGTTCAGGACAAGG+AGG 0.722763 8.1:+73205009 None:intergenic
GGTCTTGGAGAAGCACTGTG+AGG 0.738541 8.1:+73204950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAGTTAAATACTTAAATT+TGG - chr8.1:73204393-73204412 MS.gene019708:intron 10.0%
!! TTAATAATACTTCTTAATAA+AGG - chr8.1:73205354-73205373 MS.gene019708:intron 10.0%
!!! AAAATTGCTATTATAAATAA+AGG + chr8.1:73204038-73204057 None:intergenic 10.0%
!!! AATCAGTTTTTTATTTTTTT+AGG + chr8.1:73204752-73204771 None:intergenic 10.0%
!! ATAATCAACAAAAATCAATA+TGG - chr8.1:73205603-73205622 MS.gene019708:intron 15.0%
!! CAGTTAGAAAATATAAAATA+TGG + chr8.1:73204310-73204329 None:intergenic 15.0%
!! CTAACTGATAAAAATATAAA+AGG - chr8.1:73204708-73204727 MS.gene019708:intron 15.0%
!! GTATTATGAAAATGATATAT+TGG + chr8.1:73205188-73205207 None:intergenic 15.0%
!! TAGATTAATAATCAATTATG+TGG + chr8.1:73205581-73205600 None:intergenic 15.0%
!! AAACAAACAAGTATTACATT+AGG + chr8.1:73205982-73206001 None:intergenic 20.0%
!! AATGCATTACTAAATGTTTA+TGG + chr8.1:73205146-73205165 None:intergenic 20.0%
!! TAATACTTCTTAATAAAGGT+TGG - chr8.1:73205358-73205377 MS.gene019708:intron 20.0%
!! TAGAATGACTCAATTTATAA+TGG - chr8.1:73205255-73205274 MS.gene019708:intron 20.0%
!! TTTATGTACTATTTCAACTT+TGG - chr8.1:73204180-73204199 MS.gene019708:intron 20.0%
!!! AATTTCTAGTTAACATGAAA+AGG + chr8.1:73204659-73204678 None:intergenic 20.0%
!!! TGATTTTGATTAGACATATT+AGG + chr8.1:73205706-73205725 None:intergenic 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG - chr8.1:73203908-73203927 MS.gene019708:intron 20.0%
! AGAGATATATTGCTAGAATA+TGG - chr8.1:73204788-73204807 MS.gene019708:intron 25.0%
! ATGAATAAAACCATATTGAG+AGG - chr8.1:73205442-73205461 MS.gene019708:intron 25.0%
! ATTTACGCAATCAATTGTTA+AGG + chr8.1:73205558-73205577 None:intergenic 25.0%
! CTTAAATAAGATGAGAGATA+AGG + chr8.1:73205802-73205821 None:intergenic 25.0%
! GAAAATACATGAGAAATCTA+GGG - chr8.1:73204810-73204829 MS.gene019708:intron 25.0%
! GTTCATTCAATATAGAATCA+AGG + chr8.1:73203670-73203689 None:intergenic 25.0%
! TGAACAAATTGAAGAAACAA+CGG - chr8.1:73204425-73204444 MS.gene019708:intron 25.0%
! TGTCTATATTGGTAAGAAAT+AGG - chr8.1:73205918-73205937 MS.gene019708:intron 25.0%
! TTCAATATAGAATCAAGGTT+AGG + chr8.1:73203665-73203684 None:intergenic 25.0%
!! CTTATCTCTCATCTTATTTA+AGG - chr8.1:73205800-73205819 MS.gene019708:intron 25.0%
!! GATTTTGCATTTTCAAAAAG+TGG - chr8.1:73205504-73205523 MS.gene019708:intron 25.0%
!! GGATACTTTTATATGTTACT+TGG - chr8.1:73204090-73204109 MS.gene019708:intron 25.0%
AAAAATTGTTGACAGAGTGA+AGG - chr8.1:73203865-73203884 MS.gene019708:CDS 30.0%
AAACATGCAACAGATATTCT+TGG + chr8.1:73206140-73206159 None:intergenic 30.0%
AAGATATTCCTATAGTATGC+AGG - chr8.1:73204134-73204153 MS.gene019708:intron 30.0%
AAGTCCTTTATCAGGATAAA+TGG - chr8.1:73205032-73205051 MS.gene019708:CDS 30.0%
ATTTATCCTGATAAAGGACT+TGG + chr8.1:73205033-73205052 None:intergenic 30.0%
CAATCCATTTATCCTGATAA+AGG + chr8.1:73205039-73205058 None:intergenic 30.0%
CATACTATAGGAATATCTTC+TGG + chr8.1:73204133-73204152 None:intergenic 30.0%
GAAATCATTATCAGAATGCT+TGG + chr8.1:73204975-73204994 None:intergenic 30.0%
GACAAGACTAATGTCTATAT+TGG - chr8.1:73205907-73205926 MS.gene019708:intron 30.0%
GATTAAATAGAACTCTCATG+TGG + chr8.1:73204689-73204708 None:intergenic 30.0%
GGAAAATACATGAGAAATCT+AGG - chr8.1:73204809-73204828 MS.gene019708:intron 30.0%
GGTATAATTGAATGTAACCA+TGG + chr8.1:73204289-73204308 None:intergenic 30.0%
TACATATACCTGCATACTAT+AGG + chr8.1:73204145-73204164 None:intergenic 30.0%
TAGGCTAACTCATATTTATC+AGG + chr8.1:73203779-73203798 None:intergenic 30.0%
TCCAAACCATCTAAAAGATA+TGG - chr8.1:73204874-73204893 MS.gene019708:CDS 30.0%
TCTGATAAGAGTTCCTTTAT+AGG + chr8.1:73206203-73206222 None:intergenic 30.0%
! AATCTCTGTCAAAGAACTTT+TGG + chr8.1:73205488-73205507 None:intergenic 30.0%
! ATCTCTGTCAAAGAACTTTT+GGG + chr8.1:73205487-73205506 None:intergenic 30.0%
! ATTAGACATATTAGGTTGCA+TGG + chr8.1:73205698-73205717 None:intergenic 30.0%
! CACAATCCATATCTTTTAGA+TGG + chr8.1:73204883-73204902 None:intergenic 30.0%
! CTTTGTTATCAATATCTGCA+AGG + chr8.1:73203832-73203851 None:intergenic 30.0%
! TATAGGAATATCTTCTGGTT+TGG + chr8.1:73204128-73204147 None:intergenic 30.0%
! TCCATATCTTTTAGATGGTT+TGG + chr8.1:73204878-73204897 None:intergenic 30.0%
! TTTGCATTTTCAAAAAGTGG+TGG - chr8.1:73205507-73205526 MS.gene019708:intron 30.0%
!! AAATCATCATTGTGCTGTTT+CGG - chr8.1:73205720-73205739 MS.gene019708:intron 30.0%
!! ATAGGAATATCTTCTGGTTT+GGG + chr8.1:73204127-73204146 None:intergenic 30.0%
!! CATATTTATCAGGTTGATGA+TGG + chr8.1:73203769-73203788 None:intergenic 30.0%
!!! GTGTGTTATTTTAGTAGCTA+TGG + chr8.1:73205674-73205693 None:intergenic 30.0%
!!! TCACTCTGTCAACAATTTTT+TGG + chr8.1:73203865-73203884 None:intergenic 30.0%
AAAGCTCTATGGACCTATAA+AGG - chr8.1:73206187-73206206 MS.gene019708:CDS 35.0%
AACTGAGGTTTCTCTGTATA+TGG + chr8.1:73206237-73206256 None:intergenic 35.0%
ACTGAGGTTTCTCTGTATAT+GGG + chr8.1:73206236-73206255 None:intergenic 35.0%
AGAGTTCTTGCAAATCATGT+TGG - chr8.1:73206113-73206132 MS.gene019708:CDS 35.0%
ATGTTTAGCATGTGTCCTAT+CGG - chr8.1:73204249-73204268 MS.gene019708:intron 35.0%
ATTGATATTACACCTGTTCC+TGG - chr8.1:73205055-73205074 MS.gene019708:CDS 35.0%
CTTGGACAACTTAAGCAAAA+TGG - chr8.1:73205397-73205416 MS.gene019708:intron 35.0%
GAAACAAAAGCTGGTGTAAA+AGG - chr8.1:73203704-73203723 MS.gene019708:CDS 35.0%
GAACTATTGTCAGAAGCTTT+AGG - chr8.1:73204845-73204864 MS.gene019708:intron 35.0%
GCATTTGATGAAACAAAAGC+TGG - chr8.1:73203695-73203714 MS.gene019708:CDS 35.0%
TATAGAATCAAGGTTAGGCT+TGG + chr8.1:73203660-73203679 None:intergenic 35.0%
TCTTAAGTCCTTCATCAACA+AGG + chr8.1:73203730-73203749 None:intergenic 35.0%
TGTTAAGGAACTGTCGTTAT+AGG + chr8.1:73205543-73205562 None:intergenic 35.0%
! AAAGATATGGATTGTGCTGA+AGG - chr8.1:73204887-73204906 MS.gene019708:CDS 35.0%
! AATAACATGGCTTGTGTTGT+AGG + chr8.1:73203798-73203817 None:intergenic 35.0%
! AGTTGAAAGATGGTGTTAAG+AGG - chr8.1:73203954-73203973 MS.gene019708:intron 35.0%
! GCACTAACGCTTTAAATTGT+AGG - chr8.1:73204218-73204237 MS.gene019708:intron 35.0%
! GGTCTGTTTTACTTTGTTCA+GGG + chr8.1:73205653-73205672 None:intergenic 35.0%
! GTGAAGCACTAACATATACA+AGG + chr8.1:73204368-73204387 None:intergenic 35.0%
! TAATGTTGGAGATCTTTTGC+AGG - chr8.1:73205090-73205109 MS.gene019708:CDS 35.0%
! TAGTCCTTTTGCTTCAAAGT+AGG + chr8.1:73206273-73206292 None:intergenic 35.0%
! TGGTCTGTTTTACTTTGTTC+AGG + chr8.1:73205654-73205673 None:intergenic 35.0%
! TTTGAAGCAAAAGGACTAGA+TGG - chr8.1:73206275-73206294 MS.gene019708:CDS 35.0%
!! ATCAGGTTGATGATGGAATA+AGG + chr8.1:73203762-73203781 None:intergenic 35.0%
!! CATTAGTCTTGTCTGTTTGA+AGG + chr8.1:73205900-73205919 None:intergenic 35.0%
!! GTTGATGATGGAATAAGGTA+GGG + chr8.1:73203757-73203776 None:intergenic 35.0%
!! TGTTAAGAGGTTTTATGAGC+AGG - chr8.1:73203967-73203986 MS.gene019708:intron 35.0%
!!! ATGAGAGTGTTGGTTTTAGA+AGG + chr8.1:73205226-73205245 None:intergenic 35.0%
!!! TGAGAGTGTTGGTTTTAGAA+GGG + chr8.1:73205225-73205244 None:intergenic 35.0%
AACATATACAAGGACACCAG+AGG + chr8.1:73204358-73204377 None:intergenic 40.0%
AACTCCTCAAGAACACTCAA+AGG + chr8.1:73203938-73203957 None:intergenic 40.0%
AATCCCTTTGAGTGTTCTTG+AGG - chr8.1:73203931-73203950 MS.gene019708:intron 40.0%
ACATTAACTATGAGAGCTCC+AGG + chr8.1:73205076-73205095 None:intergenic 40.0%
ACTCCTCAAGAACACTCAAA+GGG + chr8.1:73203937-73203956 None:intergenic 40.0%
AGGATTCTCTCCTCTCAATA+TGG + chr8.1:73205455-73205474 None:intergenic 40.0%
ATAGCTCACCAGCACTTAAT+TGG - chr8.1:73204065-73204084 MS.gene019708:intron 40.0%
ATATCTGCAAGGTCTATGAC+AGG + chr8.1:73203821-73203840 None:intergenic 40.0%
CAGGACAAGGAGGATAATAA+TGG + chr8.1:73204928-73204947 None:intergenic 40.0%
GCAATGTAAGCAACAACAGA+GGG + chr8.1:73205847-73205866 None:intergenic 40.0%
GGAGCTCTCATAGTTAATGT+TGG - chr8.1:73205076-73205095 MS.gene019708:CDS 40.0%
GGTCTATGACAGGAATAACA+TGG + chr8.1:73203811-73203830 None:intergenic 40.0%
GTTCTTGAGGAGTTGAAAGA+TGG - chr8.1:73203944-73203963 MS.gene019708:intron 40.0%
TATAGGTCCATAGAGCTTTG+AGG + chr8.1:73206186-73206205 None:intergenic 40.0%
TATCCTGATAAAGGACTTGG+AGG + chr8.1:73205030-73205049 None:intergenic 40.0%
TGCAATGTAAGCAACAACAG+AGG + chr8.1:73205848-73205867 None:intergenic 40.0%
TGTCCAAGTCACTTATCACT+TGG + chr8.1:73205385-73205404 None:intergenic 40.0%
! AAAGAACTTTTGGGCACATG+TGG + chr8.1:73205478-73205497 None:intergenic 40.0%
! AAGGAAGCATGTGAAACATG+GGG - chr8.1:73203884-73203903 MS.gene019708:intron 40.0%
! ATTATGCTCGATGAGAGTGT+TGG + chr8.1:73205236-73205255 None:intergenic 40.0%
! GAAGGAAGCATGTGAAACAT+GGG - chr8.1:73203883-73203902 MS.gene019708:intron 40.0%
! TGAAGGAAGCATGTGAAACA+TGG - chr8.1:73203882-73203901 MS.gene019708:intron 40.0%
!! GGTTGATGATGGAATAAGGT+AGG + chr8.1:73203758-73203777 None:intergenic 40.0%
!! GTAAAAGGCCTTGTTGATGA+AGG - chr8.1:73203719-73203738 MS.gene019708:CDS 40.0%
!! GTAGCCTACTTTGAAGCAAA+AGG - chr8.1:73206266-73206285 MS.gene019708:CDS 40.0%
!!! GTTGCATGTTTTTTCTGCAC+AGG - chr8.1:73206149-73206168 MS.gene019708:CDS 40.0%
AGCAAAATGGTCACGTTCAC+TGG - chr8.1:73205410-73205429 MS.gene019708:intron 45.0%
AGGTCATCCTCAAAGCTCTA+TGG - chr8.1:73206176-73206195 MS.gene019708:CDS 45.0%
CCTGAACCAGAATTGACTGT+GGG - chr8.1:73204944-73204963 MS.gene019708:CDS 45.0%
CTCACCAGCACTTAATTGGA+GGG - chr8.1:73204069-73204088 MS.gene019708:intron 45.0%
CTGCCATGATCCAGTGAATT+GGG + chr8.1:73204451-73204470 None:intergenic 45.0%
CTTCTCCAAGACCATATTGG+TGG - chr8.1:73205004-73205023 MS.gene019708:CDS 45.0%
GACAATATTAGTGTCGCCTC+TGG - chr8.1:73204339-73204358 MS.gene019708:intron 45.0%
GAGGTTTCTCTGTATATGGG+AGG + chr8.1:73206233-73206252 None:intergenic 45.0%
GCGACACTAATATTGTCACG+TGG + chr8.1:73204336-73204355 None:intergenic 45.0%
GGTCCAAGTGATAAGTGACT+TGG - chr8.1:73205379-73205398 MS.gene019708:intron 45.0%
GTATCCCTCCAATTAAGTGC+TGG + chr8.1:73204076-73204095 None:intergenic 45.0%
GTGCTTCTCCAAGACCATAT+TGG - chr8.1:73205001-73205020 MS.gene019708:CDS 45.0%
GTTGTTCCCACAGTCAATTC+TGG + chr8.1:73204953-73204972 None:intergenic 45.0%
TCCTGAACCAGAATTGACTG+TGG - chr8.1:73204943-73204962 MS.gene019708:CDS 45.0%
!! AATTCTGGTTCAGGACAAGG+AGG + chr8.1:73204938-73204957 None:intergenic 45.0%
!! ATGTAACCATGGTGTCGTGT+TGG + chr8.1:73204278-73204297 None:intergenic 45.0%
!! GTCAATTCTGGTTCAGGACA+AGG + chr8.1:73204941-73204960 None:intergenic 45.0%
!! TCTTCTGGTTTGGGAGTATC+AGG + chr8.1:73204118-73204137 None:intergenic 45.0%
!!! GTTTTTTCTGCACAGGTCAC+AGG - chr8.1:73206156-73206175 MS.gene019708:CDS 45.0%
!! AATTAATATATCTTAAAATA+AGG + chr8.1:73204617-73204636 None:intergenic 5.0%
ACTATGAGAGCTCCAGGAAC+AGG + chr8.1:73205070-73205089 None:intergenic 50.0%
GAAACAACGGCCCAATTCAC+TGG - chr8.1:73204438-73204457 MS.gene019708:intron 50.0%
GATAGAGTGACCTTGCTACC+AGG + chr8.1:73204474-73204493 None:intergenic 50.0%
GCTCACCAGCACTTAATTGG+AGG - chr8.1:73204068-73204087 MS.gene019708:intron 50.0%
GCTGAAGGACTACTTGCTCT+TGG - chr8.1:73204902-73204921 MS.gene019708:CDS 50.0%
GCTGCCATGATCCAGTGAAT+TGG + chr8.1:73204452-73204471 None:intergenic 50.0%
GGCTACATAGTCAGCAACTG+AGG + chr8.1:73206252-73206271 None:intergenic 50.0%
TGGCCTCCAAGTCCTTTATC+AGG - chr8.1:73205024-73205043 MS.gene019708:CDS 50.0%
! GAACTTTTGGGCACATGTGG+AGG + chr8.1:73205475-73205494 None:intergenic 50.0%
!! CCCACAGTCAATTCTGGTTC+AGG + chr8.1:73204947-73204966 None:intergenic 50.0%
ATCATGGCAGCCTGGTAGCA+AGG - chr8.1:73204461-73204480 MS.gene019708:intron 55.0%
CGGCCCAATTCACTGGATCA+TGG - chr8.1:73204445-73204464 MS.gene019708:intron 55.0%
GGACTTGGAGGCCACCAATA+TGG + chr8.1:73205018-73205037 None:intergenic 55.0%
GGAGGCCACCAATATGGTCT+TGG + chr8.1:73205012-73205031 None:intergenic 55.0%
TTCACTGGATCATGGCAGCC+TGG - chr8.1:73204453-73204472 MS.gene019708:intron 55.0%
! GTGTCGTGTTGGTGTCCGAT+AGG + chr8.1:73204267-73204286 None:intergenic 55.0%
!! GGTCTTGGAGAAGCACTGTG+AGG + chr8.1:73204997-73205016 None:intergenic 55.0%
CGGACACCAACACGACACCA+TGG - chr8.1:73204269-73204288 MS.gene019708:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 73203638 73206328 73203638 ID=MS.gene019708
chr8.1 mRNA 73203638 73206328 73203638 ID=MS.gene019708.t1;Parent=MS.gene019708
chr8.1 exon 73205991 73206328 73205991 ID=MS.gene019708.t1.exon1;Parent=MS.gene019708.t1
chr8.1 CDS 73205991 73206328 73205991 ID=cds.MS.gene019708.t1;Parent=MS.gene019708.t1
chr8.1 exon 73205811 73205897 73205811 ID=MS.gene019708.t1.exon2;Parent=MS.gene019708.t1
chr8.1 CDS 73205811 73205897 73205811 ID=cds.MS.gene019708.t1;Parent=MS.gene019708.t1
chr8.1 exon 73204855 73205176 73204855 ID=MS.gene019708.t1.exon3;Parent=MS.gene019708.t1
chr8.1 CDS 73204855 73205176 73204855 ID=cds.MS.gene019708.t1;Parent=MS.gene019708.t1
chr8.1 exon 73203638 73203889 73203638 ID=MS.gene019708.t1.exon4;Parent=MS.gene019708.t1
chr8.1 CDS 73203638 73203889 73203638 ID=cds.MS.gene019708.t1;Parent=MS.gene019708.t1
Gene Sequence

>MS.gene019708

ATGGGAACTACTGATACAACCAAGCCTAACCTTGATTCTATATTGAATGAACGCAAAGCATTTGATGAAACAAAAGCTGGTGTAAAAGGCCTTGTTGATGAAGGACTTAAGAAGATCCCTACCTTATTCCATCATCAACCTGATAAATATGAGTTAGCCTACAACACAAGCCATGTTATTCCTGTCATAGACCTTGCAGATATTGATAACAAAGATCGTATTCACCAAAAAATTGTTGACAGAGTGAAGGAAGCATGTGAAACATGGGGATTTTTTCAAGTTGTTAATCATGGAATCCCTTTGAGTGTTCTTGAGGAGTTGAAAGATGGTGTTAAGAGGTTTTATGAGCAGGATACAGAAGTAAAAAAAGATTTGTATACTAGAGATAGACATAAATCCTTTATTTATAATAGCAATTTTGATATTTATAGCTCACCAGCACTTAATTGGAGGGATACTTTTATATGTTACTTGGCTCCTGATACTCCCAAACCAGAAGATATTCCTATAGTATGCAGGTATATGTATGCATCTGTATAAAATTTATGTACTATTTCAACTTTGGTTATTATTGTAAGTTGCACTAACGCTTTAAATTGTAGGCATGTGCGATGTTTAGCATGTGTCCTATCGGACACCAACACGACACCATGGTTACATTCAATTATACCATATTTTATATTTTCTAACTGTGTCCACGTGACAATATTAGTGTCGCCTCTGGTGTCCTTGTATATGTTAGTGCTTCACAAGATTTAAGTTAAATACTTAAATTTGGTTTTCTATTTGAACAAATTGAAGAAACAACGGCCCAATTCACTGGATCATGGCAGCCTGGTAGCAAGGTCACTCTATCACGTCGCTCGCGTATTGAAGTTGTTCTCAAACTTAGTCTTTTGCTTGTTAAATTCTCTCTCTTATCTCGTCTTAGATATAAGAGAAAATGTTGTTTTTATCAGTGATGTTACTTTCGTATCCTTATTTTAAGATATATTAATTGATGAACTAGCTTTGATTTCCTTTTCATGTTAACTAGAAATTTATCTTTCCACATGAGAGTTCTATTTAATCTAACTGATAAAAATATAAAAGGTCTGAAATTGATTTTAATCCTAAAAAAATAAAAAACTGATTTGCTACTTATTTTTGCAGAGATATATTGCTAGAATATGGAAAATACATGAGAAATCTAGGGACTTTATTGTTTGAACTATTGTCAGAAGCTTTAGGTCTGAATCCAAACCATCTAAAAGATATGGATTGTGCTGAAGGACTACTTGCTCTTGGCCATTATTATCCTCCTTGTCCTGAACCAGAATTGACTGTGGGAACAACCAAGCATTCTGATAATGATTTCCTCACAGTGCTTCTCCAAGACCATATTGGTGGCCTCCAAGTCCTTTATCAGGATAAATGGATTGATATTACACCTGTTCCTGGAGCTCTCATAGTTAATGTTGGAGATCTTTTGCAGGCAAGTTTTCTGCATTTTAATGTGCATATTTCCATAAACATTTAGTAATGCATTATTAACATATTTCTGTCTTCCAATATATCATTTTCATAATACTTTTTCTCTCATATCCCTTCTAAAACCAACACTCTCATCGAGCATAATAGAATGACTCAATTTATAATGGCTCATTCAAAACAGAACTTAATGCACATATTCATCAATTAATTAGTGCTTTAGAATAATTAATCATAGTTAATATGTTAATAATACTTCTTAATAAAGGTTGGTCCAAGTGATAAGTGACTTGGACAACTTAAGCAAAATGGTCACGTTCACTGGATTTTGCATATGAATAAAACCATATTGAGAGGAGAGAATCCTCCACATGTGCCCAAAAGTTCTTTGACAGAGATTTTGCATTTTCAAAAAGTGGTGGATACTATATACCTATAACGACAGTTCCTTAACAATTGATTGCGTAAATCCACATAATTGATTATTAATCTAACATAATCAACAAAAATCAATATGGCACTTATTGAACAATCAGAATGTGCCCTGAACAAAGTAAAACAGACCATAGCTACTAAAATAACACACACCATGCAACCTAATATGTCTAATCAAAATCATCATTGTGCTGTTTCGGTTCTTGTAATTAATCAGTTATTTGCATTTTCAACTTGACTTCAAGTATGTAGCATGCCTTATCTCTCATCTTATTTAAGGTGTTATGTTATATCTTTTGTGCCCTCTGTTGTTGCTTACATTGCAAGTAATTTGACTTTCAACATAAACTTGATCCTTCAAACAGACAAGACTAATGTCTATATTGGTAAGAAATAGGAAAAATGATTTTTTCTCATATTAGAATGATATAGTTGACCTAATGTAATACTTGTTTGTTTTTATTTGTTGTTGTGTGAAGAATCAATGATAGATAAAAACATATAGCTGATTTTGTTTGTTTGTTTGAATTGTAGCTTATAACAAATGACAAATTCAAGAGTGTTGAACACAGAGTTCTTGCAAATCATGTTGGTCCAAGAATATCTGTTGCATGTTTTTTCTGCACAGGTCACAGGTCATCCTCAAAGCTCTATGGACCTATAAAGGAACTCTTATCAGATGACAATCCTCCCATATACAGAGAAACCTCAGTTGCTGACTATGTAGCCTACTTTGAAGCAAAAGGACTAGATGGTACTTCTGCTCTTACACATTTCAAGATTTGA
Protein sequence

>MS.gene019708.t1

MGTTDTTKPNLDSILNERKAFDETKAGVKGLVDEGLKKIPTLFHHQPDKYELAYNTSHVIPVIDLADIDNKDRIHQKIVDRVKEACETWGFFQVVNHGIPLSVLEELKDGVKSSPALNWRDTFICYLAPDTPKPEDIPIVCRDILLEYGKYMRNLGTLLFELLSEALGLNPNHLKDMDCAEGLLALGHYYPPCPEPELTVGTTKHSDNDFLTVLLQDHIGGLQVLYQDKWIDITPVPGALIVNVGDLLQLITNDKFKSVEHRVLANHVGPRISVACFFCTGHRSSSKLYGPIKELLSDDNPPIYRETSVADYVAYFEAKGLDGTSALTHFKI