AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022677

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022677.t1 MTR_8g009090 96.978 364 11 0 1 364 1 364 0.0 741
MS.gene022677.t1 MTR_8g008930 89.589 365 37 1 1 364 1 365 0.0 687
MS.gene022677.t1 MTR_8g009160 85.989 364 51 0 1 364 1 364 0.0 665
MS.gene022677.t1 MTR_8g009110 85.753 365 51 1 1 364 1 365 0.0 655
MS.gene022677.t1 MTR_8g028435 85.440 364 53 0 1 364 1 364 0.0 654
MS.gene022677.t1 MTR_8g009170 85.246 366 52 2 1 364 1 366 0.0 645
MS.gene022677.t1 MTR_4g117880 75.683 366 87 2 1 364 1 366 0.0 580
MS.gene022677.t1 MTR_8g009150 74.795 365 71 2 1 364 1 345 0.0 561
MS.gene022677.t1 MTR_8g009120 74.521 365 80 2 1 364 1 353 0.0 546
MS.gene022677.t1 MTR_2g069210 68.306 366 111 3 2 364 4 367 0.0 526
MS.gene022677.t1 MTR_2g069190 69.972 353 102 2 15 364 20 371 0.0 516
MS.gene022677.t1 MTR_2g069090 70.621 354 99 3 15 364 20 372 0.0 513
MS.gene022677.t1 MTR_8g009170 86.170 282 38 1 1 281 1 282 0.0 505
MS.gene022677.t1 MTR_8g009080 66.298 362 117 4 6 364 38 397 3.62e-176 495
MS.gene022677.t1 MTR_2g069300 66.193 352 114 3 17 364 8 358 4.86e-175 491
MS.gene022677.t1 MTR_1g043770 60.955 356 132 4 14 364 2 355 9.74e-158 447
MS.gene022677.t1 MTR_1g043775 59.259 351 138 4 17 364 9 357 1.64e-151 431
MS.gene022677.t1 MTR_1g043810 57.835 351 143 4 17 364 9 357 5.69e-151 430
MS.gene022677.t1 MTR_1g043760 59.599 349 137 3 17 363 9 355 2.62e-150 428
MS.gene022677.t1 MTR_8g041620 55.775 355 148 4 17 364 22 374 1.44e-145 417
MS.gene022677.t1 MTR_8g041600 55.493 355 149 4 17 364 22 374 1.06e-144 415
MS.gene022677.t1 MTR_0032s0040 53.581 377 158 4 1 364 1 373 1.72e-142 409
MS.gene022677.t1 MTR_7g056347 51.752 371 166 5 4 364 6 373 2.57e-142 408
MS.gene022677.t1 MTR_1g093120 51.351 370 172 4 1 364 3 370 2.99e-141 405
MS.gene022677.t1 MTR_2g069060 56.447 349 132 4 16 364 21 349 5.74e-141 404
MS.gene022677.t1 MTR_8g006930 53.639 371 159 5 4 364 6 373 9.05e-138 397
MS.gene022677.t1 MTR_2g069010 54.342 357 153 5 16 364 21 375 1.84e-137 396
MS.gene022677.t1 MTR_7g029655 53.056 360 155 4 15 364 15 370 4.40e-137 395
MS.gene022677.t1 MTR_4g119410 54.570 372 156 5 3 364 5 373 6.11e-137 395
MS.gene022677.t1 MTR_1g093140 50.133 377 174 4 1 364 3 378 4.89e-136 392
MS.gene022677.t1 MTR_1g093110 51.111 360 162 5 16 364 18 374 1.84e-134 389
MS.gene022677.t1 MTR_2g068950 52.151 372 167 6 1 364 1 369 1.59e-133 386
MS.gene022677.t1 MTR_8g009180 76.518 247 42 2 134 364 48 294 1.79e-133 383
MS.gene022677.t1 MTR_8g063070 49.462 372 179 5 1 364 3 373 4.11e-133 385
MS.gene022677.t1 MTR_8g062600 48.533 375 174 5 3 364 5 373 1.38e-130 379
MS.gene022677.t1 MTR_7g078010 52.022 371 165 5 4 364 6 373 2.08e-130 378
MS.gene022677.t1 MTR_2g068960 51.613 372 169 6 1 364 1 369 2.47e-130 378
MS.gene022677.t1 MTR_4g024660 48.378 370 182 5 3 364 5 373 3.59e-129 375
MS.gene022677.t1 MTR_2g069020 52.408 353 155 6 16 360 19 366 8.94e-129 374
MS.gene022677.t1 MTR_7g056393 51.613 372 167 5 3 364 5 373 1.03e-128 374
MS.gene022677.t1 MTR_2g069020 52.408 353 155 6 16 360 19 366 3.83e-128 373
MS.gene022677.t1 MTR_8g009080 64.516 279 94 4 6 281 38 314 3.01e-127 369
MS.gene022677.t1 MTR_8g009080 64.130 276 94 4 6 278 38 311 1.22e-124 362
MS.gene022677.t1 MTR_8g469400 47.838 370 171 7 3 364 5 360 2.87e-120 352
MS.gene022677.t1 MTR_1g043770 60.806 273 100 4 14 281 2 272 1.31e-113 333
MS.gene022677.t1 MTR_1g070185 46.724 351 178 3 17 364 23 367 1.34e-113 335
MS.gene022677.t1 MTR_1g043775 60.075 268 102 4 17 281 9 274 5.74e-112 329
MS.gene022677.t1 MTR_1g043810 58.209 268 107 4 17 281 9 274 3.14e-110 325
MS.gene022677.t1 MTR_8g041600 53.676 272 118 3 17 282 22 291 1.55e-105 312
MS.gene022677.t1 MTR_7g056353 46.591 352 156 5 16 363 23 346 9.95e-105 317
MS.gene022677.t1 MTR_2g069060 59.829 234 91 2 55 288 22 252 3.25e-101 300
MS.gene022677.t1 MTR_7g078010 52.797 286 125 4 4 282 6 288 1.85e-99 297
MS.gene022677.t1 MTR_7g105070 39.714 350 205 3 19 364 15 362 3.91e-93 283
MS.gene022677.t1 MTR_1g032220 42.571 350 190 4 19 363 28 371 2.48e-91 278
MS.gene022677.t1 MTR_1g032140 42.582 364 198 4 5 363 7 364 1.83e-89 273
MS.gene022677.t1 MTR_1g032250 42.105 342 187 4 19 355 28 363 2.88e-87 268
MS.gene022677.t1 MTR_1g043840 56.897 174 71 1 175 344 50 223 3.20e-66 213
MS.gene022677.t1 MTR_1g043840 56.757 74 31 1 71 144 256 328 6.32e-22 95.5
MS.gene022677.t1 MTR_7g068650 32.682 358 218 9 19 359 6 357 1.04e-62 204
MS.gene022677.t1 MTR_5g032870 37.421 318 183 8 44 352 24 334 5.14e-59 194
MS.gene022677.t1 MTR_2g068840 35.411 353 201 9 27 364 21 361 4.08e-58 192
MS.gene022677.t1 MTR_4g015790 31.351 370 216 9 19 359 5 365 1.38e-57 191
MS.gene022677.t1 MTR_3g092890 35.390 308 186 5 60 363 38 336 1.91e-57 190
MS.gene022677.t1 MTR_6g015950 37.171 304 173 7 56 352 35 327 7.73e-56 186
MS.gene022677.t1 MTR_3g091350 34.018 341 192 9 13 338 18 340 1.30e-55 186
MS.gene022677.t1 MTR_5g065010 31.395 344 226 6 27 364 3 342 3.50e-55 184
MS.gene022677.t1 MTR_8g024120 31.988 322 209 4 46 364 29 343 1.58e-54 182
MS.gene022677.t1 MTR_5g032880 35.647 317 181 6 44 352 24 325 2.76e-54 189
MS.gene022677.t1 MTR_5g032880 35.849 318 188 8 44 352 362 672 5.03e-52 183
MS.gene022677.t1 MTR_0009s0050 31.897 348 216 9 27 364 12 348 4.51e-54 182
MS.gene022677.t1 MTR_0009s0050 31.897 348 216 9 27 364 12 348 5.69e-54 182
MS.gene022677.t1 MTR_1g062110 32.493 357 213 9 27 364 26 373 8.69e-54 182
MS.gene022677.t1 MTR_2g072910 30.460 348 223 9 27 364 16 354 1.19e-53 181
MS.gene022677.t1 MTR_5g055820 31.143 350 217 11 27 364 12 349 1.50e-53 181
MS.gene022677.t1 MTR_5g048570 30.747 348 218 9 27 364 12 346 7.31e-53 179
MS.gene022677.t1 MTR_5g048850 32.286 350 212 12 27 364 12 348 8.64e-53 178
MS.gene022677.t1 MTR_7g102820 32.476 311 181 7 60 351 67 367 8.76e-53 179
MS.gene022677.t1 MTR_2g072890 28.529 340 228 8 33 364 23 355 1.03e-52 178
MS.gene022677.t1 MTR_5g055680 34.242 330 195 9 46 364 30 348 1.29e-52 178
MS.gene022677.t1 MTR_1g034140 33.435 329 182 9 60 364 27 342 5.97e-52 176
MS.gene022677.t1 MTR_5g082750 33.228 316 198 6 56 363 45 355 8.05e-52 176
MS.gene022677.t1 MTR_3g070860 30.618 356 231 7 19 363 6 356 8.43e-52 176
MS.gene022677.t1 MTR_3g045230 33.718 347 212 7 27 364 17 354 9.70e-52 176
MS.gene022677.t1 MTR_1g044105 52.727 165 68 4 17 173 9 171 9.91e-52 170
MS.gene022677.t1 MTR_5g055690 30.172 348 223 7 27 364 12 349 1.76e-51 175
MS.gene022677.t1 MTR_1g070135 33.025 324 200 8 46 363 26 338 3.07e-51 174
MS.gene022677.t1 MTR_5g055900 32.759 348 213 9 27 364 12 348 4.28e-51 174
MS.gene022677.t1 MTR_1g070120 34.675 323 194 8 46 362 26 337 1.66e-50 172
MS.gene022677.t1 MTR_1g070085 30.994 342 212 8 34 363 9 338 1.71e-50 172
MS.gene022677.t1 MTR_1g070085 30.994 342 212 8 34 363 9 338 1.71e-50 172
MS.gene022677.t1 MTR_5g048550 30.612 343 217 9 27 359 12 343 2.22e-50 172
MS.gene022677.t1 MTR_1g034120 33.974 312 174 8 60 346 26 330 2.34e-50 172
MS.gene022677.t1 MTR_3g063180 32.353 340 212 9 28 355 10 343 3.79e-50 172
MS.gene022677.t1 MTR_4g087110 31.232 349 212 8 40 364 6 350 6.37e-50 171
MS.gene022677.t1 MTR_7g056370 42.857 189 101 3 18 202 2 187 8.78e-50 166
MS.gene022677.t1 MTR_7g102720 33.438 320 193 6 52 364 29 335 1.13e-49 170
MS.gene022677.t1 MTR_0009s0480 33.811 349 208 13 27 364 11 347 1.17e-49 170
MS.gene022677.t1 MTR_1g034060 33.333 312 176 8 60 346 26 330 1.26e-49 170
MS.gene022677.t1 MTR_3g091360 33.019 318 203 7 22 333 11 324 3.31e-49 169
MS.gene022677.t1 MTR_8g064200 29.661 354 231 8 11 355 1 345 3.31e-49 169
MS.gene022677.t1 MTR_8g064200 29.577 355 232 8 10 355 5 350 3.85e-49 169
MS.gene022677.t1 MTR_4g087090 31.126 302 185 5 60 344 30 325 4.44e-49 169
MS.gene022677.t1 MTR_0328s0030 30.226 354 214 7 27 364 10 346 5.76e-49 168
MS.gene022677.t1 MTR_8g075890 35.379 277 168 6 41 309 19 292 1.56e-48 167
MS.gene022677.t1 MTR_7g016090 34.528 307 178 7 55 352 36 328 1.72e-48 167
MS.gene022677.t1 MTR_7g016090 34.528 307 178 7 55 352 34 326 1.80e-48 167
MS.gene022677.t1 MTR_3g043900 32.471 348 214 9 27 364 17 353 3.27e-48 166
MS.gene022677.t1 MTR_5g048740 30.337 356 212 11 27 364 10 347 1.95e-47 164
MS.gene022677.t1 MTR_2g068800 34.035 285 151 6 27 299 21 280 2.99e-47 162
MS.gene022677.t1 MTR_1g033810 31.849 292 184 7 60 344 47 330 4.39e-47 164
MS.gene022677.t1 MTR_5g055800 30.460 348 220 11 27 364 12 347 5.84e-47 163
MS.gene022677.t1 MTR_4g093840 32.099 324 209 7 48 364 47 366 1.20e-46 163
MS.gene022677.t1 MTR_4g087100 33.663 303 167 10 60 337 26 319 1.29e-46 162
MS.gene022677.t1 MTR_5g048470 28.571 336 227 6 27 355 17 346 3.92e-46 161
MS.gene022677.t1 MTR_1g070080 33.000 300 185 8 60 352 38 328 6.95e-46 160
MS.gene022677.t1 MTR_4g087140 33.033 333 188 11 60 364 26 351 7.28e-46 160
MS.gene022677.t1 MTR_7g062570 29.360 344 217 10 27 357 19 349 1.78e-45 159
MS.gene022677.t1 MTR_8g075830 33.574 277 173 6 41 309 19 292 3.15e-45 159
MS.gene022677.t1 MTR_4g087120 28.409 352 218 9 40 364 6 350 7.04e-45 157
MS.gene022677.t1 MTR_7g062580 29.909 331 206 12 27 344 19 336 7.92e-45 158
MS.gene022677.t1 MTR_2g083030 31.788 302 167 8 57 344 34 310 9.30e-45 157
MS.gene022677.t1 MTR_5g022020 33.696 276 172 6 42 309 20 292 7.48e-44 155
MS.gene022677.t1 MTR_7g016080 32.573 307 176 8 55 352 36 320 7.58e-44 154
MS.gene022677.t1 MTR_2g437380 29.747 316 202 8 60 364 50 356 2.02e-43 154
MS.gene022677.t1 MTR_3g058610 34.173 278 170 8 41 309 19 292 3.94e-43 153
MS.gene022677.t1 MTR_7g063730 28.614 339 218 10 38 364 39 365 8.00e-43 153
MS.gene022677.t1 MTR_4g099380 45.181 166 75 3 16 174 126 282 8.25e-43 150
MS.gene022677.t1 MTR_1g102070 33.824 340 195 9 22 340 16 346 4.22e-42 151
MS.gene022677.t1 MTR_5g059130 30.847 295 182 7 60 344 44 326 4.35e-42 150
MS.gene022677.t1 MTR_1g081840 31.761 318 190 8 47 347 40 347 5.36e-42 150
MS.gene022677.t1 MTR_3g117420 31.250 288 178 7 60 337 52 329 1.15e-41 149
MS.gene022677.t1 MTR_3g083370 33.898 295 155 11 60 336 4 276 1.63e-41 148
MS.gene022677.t1 MTR_7g451860 32.806 253 166 3 60 310 41 291 2.54e-41 148
MS.gene022677.t1 MTR_7g047670 32.806 253 166 3 60 310 41 291 2.54e-41 148
MS.gene022677.t1 MTR_5g011250 31.544 298 182 8 60 343 47 336 2.70e-41 148
MS.gene022677.t1 MTR_3g088565 31.317 281 175 9 59 332 2 271 3.45e-41 147
MS.gene022677.t1 MTR_3g026150 32.131 305 185 11 57 351 57 349 5.18e-41 147
MS.gene022677.t1 MTR_7g062560 29.299 314 198 8 56 364 59 353 7.62e-41 147
MS.gene022677.t1 MTR_6g464620 32.573 307 189 5 47 340 50 351 9.78e-41 147
MS.gene022677.t1 MTR_5g085330 33.103 290 162 10 60 336 5 275 1.17e-40 145
MS.gene022677.t1 MTR_2g083000 33.101 287 176 5 60 344 33 305 1.31e-40 145
MS.gene022677.t1 MTR_2g025120 32.394 284 160 9 61 331 5 269 2.06e-40 145
MS.gene022677.t1 MTR_1g062110 33.455 275 158 8 27 282 26 294 2.21e-40 145
MS.gene022677.t1 MTR_1g048940 30.960 323 188 12 60 364 45 350 2.80e-40 145
MS.gene022677.t1 MTR_7g081710 28.528 326 220 6 30 348 16 335 3.37e-40 145
MS.gene022677.t1 MTR_7g062600 30.225 311 195 11 57 357 48 346 4.25e-40 145
MS.gene022677.t1 MTR_2g102570 32.399 321 179 11 56 357 48 349 6.44e-40 145
MS.gene022677.t1 MTR_5g059140 30.662 287 175 8 60 334 42 316 1.27e-39 143
MS.gene022677.t1 MTR_8g074050 30.990 313 198 9 60 364 52 354 1.71e-39 144
MS.gene022677.t1 MTR_3g072820 29.392 296 187 7 60 345 42 325 1.89e-39 143
MS.gene022677.t1 MTR_5g005570 34.191 272 152 6 51 310 28 284 5.41e-39 142
MS.gene022677.t1 MTR_4g116010 31.579 285 177 8 60 337 50 323 6.02e-39 142
MS.gene022677.t1 MTR_1g011580 31.373 306 186 10 60 359 63 350 8.85e-39 142
MS.gene022677.t1 MTR_8g074070 30.128 312 202 8 60 364 52 354 3.02e-38 140
MS.gene022677.t1 MTR_7g045650 30.796 289 177 10 27 303 24 301 8.73e-38 138
MS.gene022677.t1 MTR_1g070135 33.884 242 148 6 46 282 26 260 1.30e-37 137
MS.gene022677.t1 MTR_1g070085 34.545 220 130 4 151 363 48 260 1.44e-37 136
MS.gene022677.t1 MTR_7g062550 27.221 349 232 10 27 364 24 361 2.04e-37 138
MS.gene022677.t1 MTR_4g074130 31.890 254 166 4 60 310 40 289 3.64e-37 137
MS.gene022677.t1 MTR_8g033380 32.302 291 183 4 60 340 54 340 6.71e-37 137
MS.gene022677.t1 MTR_4g087130 29.316 307 188 6 60 344 26 325 7.01e-37 137
MS.gene022677.t1 MTR_1g070100 34.545 220 130 4 151 363 44 256 1.58e-36 133
MS.gene022677.t1 MTR_5g055690 30.451 266 168 6 27 282 12 270 2.11e-36 133
MS.gene022677.t1 MTR_0009s0050 33.043 230 144 5 141 364 25 250 2.79e-36 132
MS.gene022677.t1 MTR_0009s0050 33.043 230 144 5 141 364 25 250 3.23e-36 132
MS.gene022677.t1 MTR_0009s0480 34.201 269 158 11 27 285 11 270 3.30e-36 132
MS.gene022677.t1 MTR_2g069070 42.767 159 74 2 16 174 21 162 3.74e-36 130
MS.gene022677.t1 MTR_5g048850 33.457 269 157 11 27 283 12 270 6.06e-36 132
MS.gene022677.t1 MTR_3g464530 30.405 296 171 9 60 346 34 303 2.52e-35 132
MS.gene022677.t1 MTR_3g088745 30.128 312 175 10 61 347 37 330 3.56e-35 132
MS.gene022677.t1 MTR_0009s0050 37.209 172 102 3 195 364 1 168 5.88e-35 126
MS.gene022677.t1 MTR_3g096500 29.693 293 187 5 61 340 67 353 1.73e-34 130
MS.gene022677.t1 MTR_2g072910 30.112 269 172 8 27 285 16 278 2.31e-34 128
MS.gene022677.t1 MTR_3g072810 30.108 279 179 6 76 344 49 321 7.45e-34 128
MS.gene022677.t1 MTR_8g074070 29.221 308 191 8 60 364 52 335 8.58e-34 128
MS.gene022677.t1 MTR_3g040410 30.492 305 157 11 59 337 5 280 9.76e-34 127
MS.gene022677.t1 MTR_0056s0160 36.139 202 117 5 158 357 35 226 1.97e-33 124
MS.gene022677.t1 MTR_3g117485 29.236 301 190 9 60 348 49 338 9.63e-33 125
MS.gene022677.t1 MTR_8g093930 27.632 304 201 5 60 351 47 343 1.28e-31 122
MS.gene022677.t1 MTR_8g008960 68.919 74 23 0 291 364 29 102 1.82e-31 115
MS.gene022677.t1 MTR_1g032240 35.922 206 102 3 159 363 1 177 6.60e-31 116
MS.gene022677.t1 MTR_5g025050 29.333 300 176 8 59 346 4 279 8.47e-31 119
MS.gene022677.t1 MTR_5g027230 28.904 301 178 9 56 344 2 278 4.46e-30 117
MS.gene022677.t1 MTR_2g437380 27.138 269 180 6 105 364 1 262 5.86e-30 116
MS.gene022677.t1 MTR_2g070870 28.808 302 180 9 57 344 25 305 8.07e-30 117
MS.gene022677.t1 MTR_2g019370 28.254 315 188 9 60 354 28 324 8.78e-30 117
MS.gene022677.t1 MTR_3g026150 29.688 256 163 8 108 354 1 248 1.35e-29 114
MS.gene022677.t1 MTR_0009s0400 38.356 146 86 2 220 364 2 144 8.31e-29 109
MS.gene022677.t1 MTR_3g026150 31.624 234 144 8 57 282 57 282 9.28e-29 113
MS.gene022677.t1 MTR_6g092620 30.249 281 167 11 59 323 2 269 2.10e-28 112
MS.gene022677.t1 MTR_5g025060 28.866 291 166 9 56 344 2 253 3.73e-28 111
MS.gene022677.t1 MTR_5g025090 27.885 312 189 8 60 359 5 292 1.37e-27 110
MS.gene022677.t1 MTR_2g025120 30.638 235 134 8 61 282 5 223 2.10e-27 108
MS.gene022677.t1 MTR_8g461330 29.316 307 183 9 60 347 27 318 3.29e-27 110
MS.gene022677.t1 MTR_3g117485 29.478 268 166 9 93 348 10 266 8.36e-27 107
MS.gene022677.t1 MTR_3g464530 29.310 232 142 6 60 282 34 252 2.37e-26 105
MS.gene022677.t1 MTR_3g083370 30.962 239 130 9 60 282 4 223 3.03e-26 105
MS.gene022677.t1 MTR_4g123020 28.716 296 188 9 59 344 19 301 1.11e-25 105
MS.gene022677.t1 MTR_4g115990 28.920 287 178 11 54 337 39 302 2.58e-25 104
MS.gene022677.t1 MTR_8g093980 25.776 322 209 8 60 361 59 370 6.50e-25 104
MS.gene022677.t1 MTR_6g088665 27.331 311 192 10 62 346 20 322 3.78e-24 102
MS.gene022677.t1 MTR_4g132770 45.161 93 50 1 222 313 32 124 5.43e-24 97.1
MS.gene022677.t1 MTR_5g024940 27.907 301 162 10 56 344 2 259 5.63e-24 100
MS.gene022677.t1 MTR_1g086550 27.976 336 188 13 60 364 20 332 6.15e-24 101
MS.gene022677.t1 MTR_1g070110 29.572 257 141 8 102 352 1 223 7.03e-24 99.0
MS.gene022677.t1 MTR_8g030880 28.832 274 161 8 57 310 2 261 9.30e-24 100
MS.gene022677.t1 MTR_6g088665 27.476 313 190 11 62 346 20 323 9.92e-24 100
MS.gene022677.t1 MTR_7g077670 28.571 273 178 8 85 347 30 295 3.61e-23 99.0
MS.gene022677.t1 MTR_2g033270 29.278 263 165 7 58 309 13 265 6.80e-22 95.1
MS.gene022677.t1 MTR_8g102600 25.000 300 197 8 68 344 15 309 8.21e-21 92.4
MS.gene022677.t1 MTR_4g099390 51.190 84 39 1 283 364 1 84 2.23e-20 84.7
MS.gene022677.t1 MTR_1g027290 26.117 291 192 9 60 336 29 310 2.17e-19 88.6
MS.gene022677.t1 MTR_4g100600 25.329 304 195 9 60 344 9 299 8.04e-19 86.7
MS.gene022677.t1 MTR_4g096840 26.349 315 191 11 56 347 22 318 1.70e-17 82.8
MS.gene022677.t1 MTR_2g068850 29.146 199 115 6 27 203 21 215 8.58e-17 79.0
MS.gene022677.t1 MTR_8g102600 29.444 180 114 5 174 344 84 259 2.08e-16 79.0
MS.gene022677.t1 MTR_7g090520 25.000 292 202 9 56 339 6 288 4.27e-16 78.6
MS.gene022677.t1 MTR_4g100590 24.194 310 197 11 60 351 9 298 4.28e-16 78.6
MS.gene022677.t1 MTR_1g027310 24.308 325 198 10 44 364 36 316 4.68e-16 78.6
MS.gene022677.t1 MTR_3g040440 46.875 64 34 0 232 295 15 78 2.39e-15 75.5
MS.gene022677.t1 MTR_7g084360 35.294 170 60 3 172 337 7 130 6.34e-15 71.2
MS.gene022677.t1 MTR_4g011720 23.510 302 210 10 60 351 9 299 7.85e-15 74.7
MS.gene022677.t1 MTR_3g108520 23.607 305 205 10 60 347 7 300 2.82e-14 73.2
MS.gene022677.t1 MTR_1g032230 32.000 150 74 3 3 148 7 132 3.85e-14 72.4
MS.gene022677.t1 MTR_4g100590 25.989 177 112 6 183 351 86 251 9.44e-12 65.1
MS.gene022677.t1 MTR_0009s0410 29.286 140 86 6 27 161 11 142 3.56e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022677.t1 AT1G06650 60.955 356 132 3 16 364 14 369 8.36e-166 468
MS.gene022677.t1 AT1G06620 61.032 349 132 2 19 364 18 365 2.33e-161 456
MS.gene022677.t1 AT5G59540 57.584 356 144 4 15 364 12 366 8.44e-157 445
MS.gene022677.t1 AT1G06640 58.127 363 144 4 9 364 8 369 1.35e-155 442
MS.gene022677.t1 AT1G06645 57.880 368 144 5 4 364 16 379 5.77e-155 441
MS.gene022677.t1 AT5G59530 57.703 357 141 6 15 364 11 364 9.33e-152 432
MS.gene022677.t1 AT1G04350 56.863 357 144 4 14 364 8 360 1.09e-150 429
MS.gene022677.t1 AT2G30840 58.310 355 141 4 16 364 9 362 1.10e-149 427
MS.gene022677.t1 AT2G30830 56.571 350 149 3 17 364 10 358 5.42e-146 417
MS.gene022677.t1 AT2G30840 57.183 355 139 5 16 364 9 356 6.39e-144 412
MS.gene022677.t1 AT1G04380 54.286 350 142 3 16 364 13 345 1.26e-143 410
MS.gene022677.t1 AT1G03410 54.775 356 152 5 16 364 8 361 4.27e-143 410
MS.gene022677.t1 AT5G43440 53.221 357 158 3 15 364 11 365 1.29e-142 409
MS.gene022677.t1 AT1G03410 54.775 356 152 5 16 364 45 398 1.84e-142 410
MS.gene022677.t1 AT5G43450 53.541 353 150 3 20 364 16 362 8.54e-139 399
MS.gene022677.t1 AT3G61400 53.611 360 156 6 15 364 12 370 7.59e-138 397
MS.gene022677.t1 AT2G25450 55.524 353 151 5 16 364 9 359 4.01e-137 395
MS.gene022677.t1 AT1G03400 52.825 354 152 5 16 364 8 351 5.68e-130 376
MS.gene022677.t1 AT1G03400 48.953 382 152 6 16 364 8 379 3.29e-123 360
MS.gene022677.t1 AT1G06620 60.526 266 101 2 19 281 18 282 4.83e-118 343
MS.gene022677.t1 AT1G06650 57.875 273 109 2 16 282 14 286 1.75e-116 340
MS.gene022677.t1 AT2G30840 57.934 271 109 2 16 281 9 279 1.38e-113 333
MS.gene022677.t1 AT5G59540 55.839 274 114 4 15 282 12 284 3.87e-113 331
MS.gene022677.t1 AT1G06640 54.296 291 126 3 4 288 3 292 7.43e-113 332
MS.gene022677.t1 AT1G06640 55.088 285 121 3 4 282 3 286 2.24e-111 327
MS.gene022677.t1 AT5G43440 52.190 274 122 3 15 281 11 282 2.02e-105 311
MS.gene022677.t1 AT5G43450 51.429 280 126 3 15 288 11 286 1.21e-102 304
MS.gene022677.t1 AT3G61400 51.625 277 125 4 15 282 12 288 9.01e-100 297
MS.gene022677.t1 AT1G04380 50.177 283 120 4 1 282 1 263 1.74e-99 296
MS.gene022677.t1 AT1G55290 34.018 341 208 7 27 359 25 356 5.73e-63 205
MS.gene022677.t1 AT3G13610 33.524 349 208 8 27 364 26 361 8.05e-62 202
MS.gene022677.t1 AT3G12900 34.821 336 211 6 27 359 21 351 6.97e-61 200
MS.gene022677.t1 AT4G10500 33.442 308 195 4 60 363 44 345 4.35e-59 195
MS.gene022677.t1 AT2G36690 33.146 356 212 8 25 364 18 363 1.34e-58 194
MS.gene022677.t1 AT2G36690 33.146 356 212 8 25 364 18 363 1.34e-58 194
MS.gene022677.t1 AT5G05600 34.194 310 191 6 56 357 58 362 7.77e-56 187
MS.gene022677.t1 AT4G10490 33.121 314 189 6 60 363 42 344 1.72e-55 185
MS.gene022677.t1 AT1G17020 31.953 338 207 10 40 364 31 358 6.94e-55 184
MS.gene022677.t1 AT2G38240 32.081 346 210 10 21 352 5 339 8.58e-55 184
MS.gene022677.t1 AT5G24530 32.573 307 197 3 60 362 38 338 1.05e-54 183
MS.gene022677.t1 AT3G11180 31.928 332 199 9 41 362 82 396 1.42e-51 177
MS.gene022677.t1 AT4G25310 34.471 293 175 8 80 364 70 353 1.63e-51 175
MS.gene022677.t1 AT3G11180 32.416 327 194 9 41 357 82 391 4.46e-51 175
MS.gene022677.t1 AT4G25300 32.121 330 206 9 40 359 30 351 1.16e-50 173
MS.gene022677.t1 AT1G78550 32.000 325 206 7 48 364 39 356 8.48e-49 168
MS.gene022677.t1 AT3G19010 34.304 309 162 8 55 337 23 316 9.83e-48 165
MS.gene022677.t1 AT3G19010 34.304 309 162 8 55 337 23 316 9.83e-48 165
MS.gene022677.t1 AT3G51240 35.216 301 180 9 34 325 10 304 1.98e-47 164
MS.gene022677.t1 AT1G17010 29.464 336 218 8 40 364 31 358 3.07e-47 164
MS.gene022677.t1 AT3G55970 33.657 309 180 9 59 352 51 349 4.56e-47 164
MS.gene022677.t1 AT3G19000 32.573 307 181 7 57 344 29 328 1.75e-45 159
MS.gene022677.t1 AT3G21420 30.114 352 225 7 28 364 17 362 3.00e-45 159
MS.gene022677.t1 AT5G08640 31.879 298 179 9 59 345 42 326 6.96e-45 157
MS.gene022677.t1 AT5G08640 31.879 298 179 9 59 345 42 326 6.96e-45 157
MS.gene022677.t1 AT4G16330 30.195 308 192 8 60 359 67 359 7.05e-44 155
MS.gene022677.t1 AT4G22880 31.879 298 179 8 60 342 47 335 1.34e-43 154
MS.gene022677.t1 AT4G22880 31.879 298 179 8 60 342 47 335 1.34e-43 154
MS.gene022677.t1 AT4G22880 31.879 298 179 8 60 342 47 335 1.34e-43 154
MS.gene022677.t1 AT3G19010 33.775 302 143 10 55 337 23 286 5.18e-43 152
MS.gene022677.t1 AT4G21200 32.753 287 176 9 60 344 42 313 1.01e-42 152
MS.gene022677.t1 AT1G77330 30.719 306 185 10 59 351 2 293 1.10e-42 150
MS.gene022677.t1 AT4G25420 32.107 299 187 4 60 347 61 354 1.40e-42 152
MS.gene022677.t1 AT1G78550 31.183 279 181 5 92 364 5 278 5.10e-42 148
MS.gene022677.t1 AT2G44800 29.882 338 223 7 21 350 9 340 3.49e-41 148
MS.gene022677.t1 AT1G05010 32.292 288 175 9 60 336 4 282 1.72e-39 143
MS.gene022677.t1 AT1G62380 34.470 264 150 8 60 313 7 257 3.06e-39 142
MS.gene022677.t1 AT5G20400 32.746 284 180 6 60 337 45 323 3.48e-39 142
MS.gene022677.t1 AT5G12270 28.212 358 223 11 25 364 18 359 3.96e-39 143
MS.gene022677.t1 AT5G05600 33.761 234 147 4 56 282 58 290 5.17e-39 140
MS.gene022677.t1 AT1G15550 31.034 319 170 11 56 349 53 346 9.08e-39 142
MS.gene022677.t1 AT3G60290 30.333 300 187 6 60 349 52 339 9.18e-39 142
MS.gene022677.t1 AT1G12010 32.331 266 153 9 60 313 7 257 3.42e-38 139
MS.gene022677.t1 AT1G60980 30.233 301 190 4 60 345 57 352 1.81e-37 139
MS.gene022677.t1 AT5G07480 27.302 315 192 9 55 348 39 337 4.72e-37 137
MS.gene022677.t1 AT4G25310 30.375 293 159 9 80 364 70 325 6.35e-37 136
MS.gene022677.t1 AT5G51810 31.104 299 186 5 60 347 63 352 1.87e-36 136
MS.gene022677.t1 AT5G63590 31.313 297 179 9 60 344 14 297 3.42e-36 134
MS.gene022677.t1 AT3G19000 30.830 253 152 6 57 290 29 277 2.35e-35 130
MS.gene022677.t1 AT5G20550 29.855 345 222 11 28 360 9 345 5.73e-35 131
MS.gene022677.t1 AT5G07200 30.769 312 193 6 15 309 13 318 1.39e-34 131
MS.gene022677.t1 AT1G80330 31.046 306 169 11 60 344 49 333 1.98e-34 130
MS.gene022677.t1 AT4G16330 31.628 215 136 4 149 359 46 253 3.84e-34 127
MS.gene022677.t1 AT5G63600 29.966 297 176 10 60 344 33 309 9.91e-34 127
MS.gene022677.t1 AT4G25300 36.170 188 115 3 174 359 73 257 1.19e-33 125
MS.gene022677.t1 AT3G19010 32.031 256 138 6 55 285 23 267 2.61e-33 125
MS.gene022677.t1 AT3G55970 33.755 237 137 7 60 282 52 282 9.75e-33 124
MS.gene022677.t1 AT4G25420 33.043 230 141 3 60 278 61 288 1.41e-32 124
MS.gene022677.t1 AT5G63600 29.866 298 176 11 60 344 33 310 2.17e-32 124
MS.gene022677.t1 AT1G49390 29.102 323 214 8 28 340 9 326 2.67e-32 124
MS.gene022677.t1 AT5G54000 31.061 264 172 5 80 337 65 324 1.30e-31 122
MS.gene022677.t1 AT3G51240 36.066 183 109 3 133 309 27 207 2.98e-31 119
MS.gene022677.t1 AT1G80340 28.736 348 181 12 40 349 21 339 3.85e-31 121
MS.gene022677.t1 AT2G19590 30.935 278 164 10 60 323 11 274 5.77e-30 117
MS.gene022677.t1 AT5G51810 32.068 237 144 4 60 285 63 293 6.91e-30 116
MS.gene022677.t1 AT5G63595 28.358 268 135 8 56 305 21 249 1.40e-29 115
MS.gene022677.t1 AT1G30040 28.339 307 185 9 56 346 27 314 1.62e-29 116
MS.gene022677.t1 AT1G50960 26.316 285 200 2 60 344 40 314 3.93e-29 115
MS.gene022677.t1 AT1G44090 30.970 268 161 5 60 311 63 322 6.68e-29 115
MS.gene022677.t1 AT4G21690 27.566 341 179 12 56 363 43 348 1.90e-28 114
MS.gene022677.t1 AT5G58660 25.862 290 155 9 60 310 34 302 4.17e-27 110
MS.gene022677.t1 AT5G54000 29.839 248 164 5 96 337 1 244 3.96e-26 105
MS.gene022677.t1 AT5G63580 28.755 233 151 5 57 282 16 240 4.80e-26 105
MS.gene022677.t1 AT1G49390 29.482 251 167 5 96 340 1 247 5.00e-26 105
MS.gene022677.t1 AT5G63580 29.004 231 149 5 57 280 16 238 5.78e-26 105
MS.gene022677.t1 AT5G43935 27.243 301 168 12 60 345 19 283 1.24e-25 105
MS.gene022677.t1 AT2G34555 28.523 298 185 7 59 344 26 307 1.71e-25 105
MS.gene022677.t1 AT1G78440 27.517 298 192 7 59 344 17 302 2.10e-25 105
MS.gene022677.t1 AT4G23340 28.571 273 176 8 86 347 30 294 2.81e-25 104
MS.gene022677.t1 AT3G47190 27.237 257 148 7 60 295 32 270 1.73e-24 102
MS.gene022677.t1 AT1G14130 28.470 281 176 7 59 324 8 278 7.93e-24 100
MS.gene022677.t1 AT1G14120 30.451 266 150 9 59 310 7 251 1.43e-23 99.8
MS.gene022677.t1 AT1G14120 30.451 266 150 9 59 310 7 251 1.43e-23 99.8
MS.gene022677.t1 AT1G14120 30.451 266 150 9 59 310 7 251 1.43e-23 99.8
MS.gene022677.t1 AT5G07480 30.526 190 120 6 166 348 44 228 4.25e-23 97.1
MS.gene022677.t1 AT2G19590 29.740 269 154 11 75 323 6 259 1.56e-22 96.7
MS.gene022677.t1 AT5G51310 27.037 270 168 7 60 310 5 264 3.58e-22 96.3
MS.gene022677.t1 AT1G47990 27.036 307 169 10 60 339 15 293 6.68e-22 95.1
MS.gene022677.t1 AT5G58660 24.809 262 137 9 60 282 34 274 9.63e-21 91.3
MS.gene022677.t1 AT3G46500 28.228 333 196 12 57 363 9 324 4.32e-20 90.1
MS.gene022677.t1 AT2G06960 36.765 136 69 3 216 351 27 145 8.73e-20 85.5
MS.gene022677.t1 AT1G02400 28.475 295 192 9 60 344 24 309 1.33e-19 89.0
MS.gene022677.t1 AT4G23340 31.285 179 112 5 177 347 1 176 5.92e-19 84.7
MS.gene022677.t1 AT3G49620 24.138 319 215 7 51 347 25 338 1.07e-18 86.7
MS.gene022677.t1 AT1G30040 25.926 243 148 8 56 282 27 253 1.12e-17 82.4
MS.gene022677.t1 AT3G50210 24.643 280 184 6 60 312 8 287 5.43e-17 81.3
MS.gene022677.t1 AT3G50210 24.643 280 184 6 60 312 8 287 5.43e-17 81.3
MS.gene022677.t1 AT3G50210 24.643 280 184 6 60 312 8 287 5.43e-17 81.3
MS.gene022677.t1 AT3G46490 26.471 306 188 10 59 336 11 307 1.10e-16 80.5
MS.gene022677.t1 AT3G49630 25.430 291 179 9 52 312 1 283 1.19e-16 80.5
MS.gene022677.t1 AT3G46500 27.203 261 162 7 60 298 12 266 2.40e-16 79.0
MS.gene022677.t1 AT1G52820 22.727 308 228 7 60 362 12 314 8.75e-16 77.8
MS.gene022677.t1 AT3G49630 25.681 257 160 7 79 312 31 279 1.76e-15 77.0
MS.gene022677.t1 AT3G46490 24.621 264 174 6 59 298 11 273 4.13e-15 75.5
MS.gene022677.t1 AT4G03070 23.438 320 218 10 55 359 9 316 2.29e-13 70.5
MS.gene022677.t1 AT4G16765 29.282 181 113 6 174 344 60 235 3.14e-13 69.3
MS.gene022677.t1 AT4G16765 29.282 181 113 6 174 344 60 235 3.14e-13 69.3
MS.gene022677.t1 AT4G16765 29.282 181 113 6 174 344 60 235 3.14e-13 69.3
MS.gene022677.t1 AT4G16765 30.636 173 105 6 174 336 60 227 3.90e-13 68.9
MS.gene022677.t1 AT3G46500 30.457 197 114 7 179 363 3 188 6.39e-13 67.4
MS.gene022677.t1 AT3G46500 30.457 197 114 7 179 363 65 250 1.23e-12 67.4
MS.gene022677.t1 AT3G46500 30.457 197 114 7 179 363 65 250 1.23e-12 67.4
MS.gene022677.t1 AT3G50210 29.221 154 98 4 166 312 56 205 8.27e-12 65.1
MS.gene022677.t1 AT3G49630 30.000 150 100 4 166 312 63 210 9.26e-12 65.1
MS.gene022677.t1 AT4G16770 26.068 234 149 7 55 270 17 244 1.14e-11 64.7
MS.gene022677.t1 AT4G22870 32.979 94 59 2 251 343 2 92 1.93e-11 60.8

Find 80 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTATCAATATCTTTA+AGG 0.109801 8.4:+78826114 None:intergenic
GTTGTTCCCACAGTCATTTC+TGG 0.141656 8.4:+78824864 None:intergenic
AACTGTGGTTTCTCTGTATT+TGG 0.141866 8.4:+78824466 None:intergenic
TCTGATAATAGTTCCTTTAT+TGG 0.252969 8.4:+78824500 None:intergenic
TCCAAACCATCTAAAAGATA+TGG 0.256802 8.4:-78824940 MS.gene022677:CDS
AGAGATATACTACTAGAATA+TGG 0.265186 8.4:-78825026 MS.gene022677:CDS
GAAACAAAAGCAGGTGTAAA+AGG 0.300249 8.4:-78826239 MS.gene022677:CDS
CCCACAGTCATTTCTGGTTC+AGG 0.304695 8.4:+78824870 None:intergenic
CTTTATTGGTCCATAGAGTT+TGG 0.326576 8.4:+78824514 None:intergenic
CATACAACAGGAAAATCTTC+TGG 0.327118 8.4:+78825810 None:intergenic
AACAGGAAAATCTTCTGGTT+TGG 0.334664 8.4:+78825815 None:intergenic
CAAACTCTATGGACCAATAA+AGG 0.347608 8.4:-78824513 MS.gene022677:CDS
AGGCCATCGTCCAAACTCTA+TGG 0.353617 8.4:-78824524 MS.gene022677:CDS
ATTAGGCTTGGTTGTATTAG+TGG 0.360179 8.4:+78826298 None:intergenic
ACAGGAAAATCTTCTGGTTT+GGG 0.360417 8.4:+78825816 None:intergenic
AATAACATGGCTTGTGTTGT+AGG 0.361872 8.4:+78826148 None:intergenic
GATGGATACAGATACTAAAA+AGG 0.382797 8.4:-78825955 MS.gene022677:CDS
ACTGTGGTTTCTCTGTATTT+GGG 0.383668 8.4:+78824467 None:intergenic
AAGCATGCAACGGATATTCT+TGG 0.388966 8.4:+78824563 None:intergenic
TCAAGGAAGCATGTGAAACT+TGG 0.407695 8.4:-78826058 MS.gene022677:CDS
TAGGCTATCTCATATTTGTC+AGG 0.412342 8.4:+78826167 None:intergenic
AAGTTCTGTATGACGACAAA+TGG 0.412887 8.4:-78824782 MS.gene022677:CDS
CATATTTGTCAGGTTGATGA+TGG 0.413248 8.4:+78826177 None:intergenic
TTTAATGCAAAAGGACTAGA+TGG 0.415229 8.4:-78824425 MS.gene022677:CDS
CTGAATGTGGAATCAAGATT+AGG 0.417544 8.4:+78826281 None:intergenic
TCTTCTGGTTTGGGAGTGTC+AGG 0.420316 8.4:+78825825 None:intergenic
GGATACTTGTACTTGTTCCT+TGG 0.421196 8.4:-78825850 MS.gene022677:CDS
ACTACTAGAATATGGGAAAC+AGG 0.425296 8.4:-78825018 MS.gene022677:CDS
GCAGCCTACTTTAATGCAAA+AGG 0.427099 8.4:-78824434 MS.gene022677:CDS
GCATTGTTGTCAGAAGCATT+AGG 0.428707 8.4:-78824969 MS.gene022677:CDS
ATAGCTCACCAGCACTCAAT+TGG 0.445033 8.4:-78825875 MS.gene022677:CDS
GGGAAACAGGTAATGAATCT+AGG 0.446970 8.4:-78825005 MS.gene022677:CDS
ATATCTTTAAGGTCTATAAC+AGG 0.449508 8.4:+78826125 None:intergenic
CAGGACAAGGAGGATAATAA+TGG 0.457753 8.4:+78824889 None:intergenic
CCAAACCATCTAAAAGATAT+GGG 0.458558 8.4:-78824939 MS.gene022677:CDS
ACAATCCCTTGATGAATACT+TGG 0.466300 8.4:+78826089 None:intergenic
GAGATATACTACTAGAATAT+GGG 0.479238 8.4:-78825025 MS.gene022677:CDS
GTGCTTCTACAAGACCATAT+TGG 0.485099 8.4:-78824813 MS.gene022677:CDS
GAACTTGAAGACCACCAATA+TGG 0.485546 8.4:+78824799 None:intergenic
CAAGGAAGCATGTGAAACTT+GGG 0.488613 8.4:-78826057 MS.gene022677:CDS
CATACATACCTGCATACAAC+AGG 0.493126 8.4:+78825798 None:intergenic
GTCATTTCTGGTTCAGGACA+AGG 0.500732 8.4:+78824876 None:intergenic
AAAGATATGGGTTGTGCTGA+AGG 0.500748 8.4:-78824927 MS.gene022677:CDS
ATCTCCTCAAGAACACTCAA+AGG 0.510634 8.4:+78826005 None:intergenic
GAGTGTTCTTGAGGAGATGA+AGG 0.513387 8.4:-78826000 MS.gene022677:CDS
GAAATCATTGTCACAATGCT+TGG 0.515295 8.4:+78824842 None:intergenic
AAAGATCCAAGTATTCATCA+AGG 0.518202 8.4:-78826095 MS.gene022677:CDS
AGCTTTACGTTCGCTGAATG+TGG 0.520538 8.4:+78826268 None:intergenic
GCTCACCAGCACTCAATTGG+AGG 0.527842 8.4:-78825872 MS.gene022677:CDS
TCTCCTCAAGAACACTCAAA+GGG 0.535297 8.4:+78826006 None:intergenic
GTGGTTTCTCTGTATTTGGG+AGG 0.538341 8.4:+78824470 None:intergenic
AGGGATTGTTAGCAAAATCA+AGG 0.538978 8.4:-78826075 MS.gene022677:CDS
ACTACGAGAGCTCCAGGTAC+AGG 0.547426 8.4:+78824747 None:intergenic
AGATGAAGGATGGTGTGAAG+AGG 0.547649 8.4:-78825986 MS.gene022677:CDS
ACATTAACTACGAGAGCTCC+AGG 0.550082 8.4:+78824741 None:intergenic
GTAAAAGGACTTGTTGATGC+AGG 0.552964 8.4:-78826224 MS.gene022677:CDS
AATCCCTTTGAGTGTTCTTG+AGG 0.553310 8.4:-78826009 MS.gene022677:CDS
GGTTGATGATGGAATAAGCT+TGG 0.560833 8.4:+78826188 None:intergenic
TTTGGGAGTGTCAGGAGCCA+AGG 0.560859 8.4:+78825833 None:intergenic
GTATCCCTCCAATTGAGTGC+TGG 0.565810 8.4:+78825867 None:intergenic
TGTGAAGAGGTTTCATGAGA+TGG 0.568486 8.4:-78825973 MS.gene022677:CDS
AGAGTAGTTGCAAATCAAGT+TGG 0.579220 8.4:-78824587 MS.gene022677:CDS
TGTGGAATCAAGATTAGGCT+TGG 0.581217 8.4:+78826286 None:intergenic
ATTGATATAACACCTGTACC+TGG 0.585161 8.4:-78824759 MS.gene022677:CDS
AAGATATGGGTTGTGCTGAA+GGG 0.594313 8.4:-78824926 MS.gene022677:CDS
AAGGAAGCATGTGAAACTTG+GGG 0.598891 8.4:-78826056 MS.gene022677:CDS
GGAGCTCTCGTAGTTAATGT+TGG 0.602143 8.4:-78824738 MS.gene022677:CDS
AAGATCCAAGTATTCATCAA+GGG 0.612697 8.4:-78826094 MS.gene022677:CDS
CTCACCAGCACTCAATTGGA+GGG 0.626812 8.4:-78825871 MS.gene022677:CDS
GTTCTTGAGGAGATGAAGGA+TGG 0.628456 8.4:-78825996 MS.gene022677:CDS
CTTCTACAAGACCATATTGG+TGG 0.634375 8.4:-78824810 MS.gene022677:CDS
GGCTGCAAAATCAGCAACTG+TGG 0.639927 8.4:+78824451 None:intergenic
GGACGATGGCCTAAGACCTG+TGG 0.664618 8.4:+78824535 None:intergenic
GGTCTATAACAGGAATAACA+TGG 0.672802 8.4:+78826135 None:intergenic
TCCTGAACCAGAAATGACTG+TGG 0.682984 8.4:-78824871 MS.gene022677:CDS
AGGAAGCATGTGAAACTTGG+GGG 0.692972 8.4:-78826055 MS.gene022677:CDS
GGTCCATAGAGTTTGGACGA+TGG 0.703355 8.4:+78824521 None:intergenic
ATTTCTGGTTCAGGACAAGG+AGG 0.708647 8.4:+78824879 None:intergenic
CCTGAACCAGAAATGACTGT+GGG 0.714206 8.4:-78824870 MS.gene022677:CDS
GGTCTTGTAGAAGCACTGTG+AGG 0.756387 8.4:+78824820 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAGTTGGTTTATATATA+TGG + chr8.4:78825079-78825098 None:intergenic 15.0%
!! AAAATCATATCATATCCTAA+TGG - chr8.4:78825545-78825564 MS.gene022677:intron 20.0%
!! AGATAATTAAGAGATAAGAT+AGG - chr8.4:78825128-78825147 MS.gene022677:intron 20.0%
!! ATGAAAATAACTAAAGTTCA+AGG + chr8.4:78824957-78824976 None:intergenic 20.0%
!! CTTGTAAAAAAAATATAGCA+TGG - chr8.4:78825287-78825306 MS.gene022677:intron 20.0%
!! TAAATTCAATTTCAGACATT+TGG + chr8.4:78825631-78825650 None:intergenic 20.0%
!! TTTATATATATGGATATCAG+AGG + chr8.4:78825069-78825088 None:intergenic 20.0%
!!! ATATAATATAAAGCACCATT+AGG + chr8.4:78825563-78825582 None:intergenic 20.0%
!!! ATATGAGTTAAAGTATCTAA+AGG + chr8.4:78825374-78825393 None:intergenic 20.0%
!!! CTTTGTTATCAATATCTTTA+AGG + chr8.4:78824588-78824607 None:intergenic 20.0%
!!! TGAACTTTAGTTATTTTCAT+TGG - chr8.4:78824957-78824976 MS.gene022677:CDS 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG - chr8.4:78824667-78824686 MS.gene022677:intron 20.0%
! AAGTATCTAAAGGACAAAAA+AGG + chr8.4:78825364-78825383 None:intergenic 25.0%
! AGAGATATACTACTAGAATA+TGG - chr8.4:78825673-78825692 MS.gene022677:intron 25.0%
! AGTATCTAAAGGACAAAAAA+GGG + chr8.4:78825363-78825382 None:intergenic 25.0%
! ATCATACAATATATTTGACG+CGG + chr8.4:78825479-78825498 None:intergenic 25.0%
! CCAACTTATACGAAATATAA+AGG - chr8.4:78825089-78825108 MS.gene022677:intron 25.0%
! CCTTTATATTTCGTATAAGT+TGG + chr8.4:78825092-78825111 None:intergenic 25.0%
! GAGATATACTACTAGAATAT+GGG - chr8.4:78825674-78825693 MS.gene022677:intron 25.0%
! TCTGATAATAGTTCCTTTAT+TGG + chr8.4:78826202-78826221 None:intergenic 25.0%
! TGAACACATCTTTATCTAAA+GGG + chr8.4:78824992-78825011 None:intergenic 25.0%
! TTGAACACATCTTTATCTAA+AGG + chr8.4:78824993-78825012 None:intergenic 25.0%
!! TTTTATACAAGAGATATGCA+TGG - chr8.4:78824769-78824788 MS.gene022677:CDS 25.0%
!!! ATATCTTTAAGGTCTATAAC+AGG + chr8.4:78824577-78824596 None:intergenic 25.0%
!!! ATCATTTGTTATAAGCTACA+AGG + chr8.4:78826071-78826090 None:intergenic 25.0%
!!! TAAGTTTTAACTACAGAGAT+AGG + chr8.4:78825235-78825254 None:intergenic 25.0%
AAAGATCCAAGTATTCATCA+AGG - chr8.4:78824604-78824623 MS.gene022677:CDS 30.0%
AAGATCCAAGTATTCATCAA+GGG - chr8.4:78824605-78824624 MS.gene022677:CDS 30.0%
AAGTTTAACAATGAGTCTTG+AGG + chr8.4:78825270-78825289 None:intergenic 30.0%
CCAAACCATCTAAAAGATAT+GGG - chr8.4:78825760-78825779 MS.gene022677:intron 30.0%
GATGGATACAGATACTAAAA+AGG - chr8.4:78824744-78824763 MS.gene022677:CDS 30.0%
TCAATTTAGTGTTTGATGAG+AGG - chr8.4:78825172-78825191 MS.gene022677:intron 30.0%
TCCAAACCATCTAAAAGATA+TGG - chr8.4:78825759-78825778 MS.gene022677:intron 30.0%
TTTAATGCAAAAGGACTAGA+TGG - chr8.4:78826274-78826293 MS.gene022677:CDS 30.0%
! TAGTCCTTTTGCATTAAAGT+AGG + chr8.4:78826272-78826291 None:intergenic 30.0%
AACTGTGGTTTCTCTGTATT+TGG + chr8.4:78826236-78826255 None:intergenic 35.0%
AAGTTCTGTATGACGACAAA+TGG - chr8.4:78825917-78825936 MS.gene022677:CDS 35.0%
ACAATCCCTTGATGAATACT+TGG + chr8.4:78824613-78824632 None:intergenic 35.0%
ACTACTAGAATATGGGAAAC+AGG - chr8.4:78825681-78825700 MS.gene022677:intron 35.0%
ACTGTGGTTTCTCTGTATTT+GGG + chr8.4:78826235-78826254 None:intergenic 35.0%
AGAGTAGTTGCAAATCAAGT+TGG - chr8.4:78826112-78826131 MS.gene022677:CDS 35.0%
AGGGATTGTTAGCAAAATCA+AGG - chr8.4:78824624-78824643 MS.gene022677:CDS 35.0%
ATTGATATAACACCTGTACC+TGG - chr8.4:78825940-78825959 MS.gene022677:CDS 35.0%
CAAACTCTATGGACCAATAA+AGG - chr8.4:78826186-78826205 MS.gene022677:CDS 35.0%
CACATCTTTATCTAAAGGGT+CGG + chr8.4:78824988-78825007 None:intergenic 35.0%
CATACAACAGGAAAATCTTC+TGG + chr8.4:78824892-78824911 None:intergenic 35.0%
CATGTACATGTGTAGCAAAT+GGG - chr8.4:78825604-78825623 MS.gene022677:intron 35.0%
CGAAATATAAAGGCTGTGTT+TGG - chr8.4:78825099-78825118 MS.gene022677:intron 35.0%
CTGAATGTGGAATCAAGATT+AGG + chr8.4:78824421-78824440 None:intergenic 35.0%
CTTTATTGGTCCATAGAGTT+TGG + chr8.4:78826188-78826207 None:intergenic 35.0%
GAAACAAAAGCAGGTGTAAA+AGG - chr8.4:78824460-78824479 MS.gene022677:CDS 35.0%
GAAATCATTGTCACAATGCT+TGG + chr8.4:78825860-78825879 None:intergenic 35.0%
GGAAATTATGCTTGAAACGA+TGG + chr8.4:78825342-78825361 None:intergenic 35.0%
GGTCTATAACAGGAATAACA+TGG + chr8.4:78824567-78824586 None:intergenic 35.0%
GTCACAAAGTTGTATGGTTT+GGG - chr8.4:78825309-78825328 MS.gene022677:intron 35.0%
TAGGCTATCTCATATTTGTC+AGG + chr8.4:78824535-78824554 None:intergenic 35.0%
TAGTGTTTGATGAGAGGATA+TGG - chr8.4:78825178-78825197 MS.gene022677:intron 35.0%
TCATGTACATGTGTAGCAAA+TGG - chr8.4:78825603-78825622 MS.gene022677:intron 35.0%
! AACAGGAAAATCTTCTGGTT+TGG + chr8.4:78824887-78824906 None:intergenic 35.0%
! AAGATTTTCCTGTTGTATGC+AGG - chr8.4:78824893-78824912 MS.gene022677:CDS 35.0%
! AATAACATGGCTTGTGTTGT+AGG + chr8.4:78824554-78824573 None:intergenic 35.0%
! ATTAGGCTTGGTTGTATTAG+TGG + chr8.4:78824404-78824423 None:intergenic 35.0%
! CACAACCCATATCTTTTAGA+TGG + chr8.4:78825768-78825787 None:intergenic 35.0%
! CCCATATCTTTTAGATGGTT+TGG + chr8.4:78825763-78825782 None:intergenic 35.0%
! GCTTTTGATGAAACAAAAGC+AGG - chr8.4:78824451-78824470 MS.gene022677:CDS 35.0%
!! ACAGGAAAATCTTCTGGTTT+GGG + chr8.4:78824886-78824905 None:intergenic 35.0%
!! CATATTTGTCAGGTTGATGA+TGG + chr8.4:78824525-78824544 None:intergenic 35.0%
!!! TAATGTTGGTGATCTTTTGC+AGG - chr8.4:78825975-78825994 MS.gene022677:CDS 35.0%
AAGCATGCAACGGATATTCT+TGG + chr8.4:78826139-78826158 None:intergenic 40.0%
AATCCCTTTGAGTGTTCTTG+AGG - chr8.4:78824690-78824709 MS.gene022677:intron 40.0%
AGCATGGTCACAAAGTTGTA+TGG - chr8.4:78825303-78825322 MS.gene022677:intron 40.0%
ATCTCCTCAAGAACACTCAA+AGG + chr8.4:78824697-78824716 None:intergenic 40.0%
CAGGACAAGGAGGATAATAA+TGG + chr8.4:78825813-78825832 None:intergenic 40.0%
CATACATACCTGCATACAAC+AGG + chr8.4:78824904-78824923 None:intergenic 40.0%
CTTCTACAAGACCATATTGG+TGG - chr8.4:78825889-78825908 MS.gene022677:CDS 40.0%
GAACTTGAAGACCACCAATA+TGG + chr8.4:78825903-78825922 None:intergenic 40.0%
GCAGCCTACTTTAATGCAAA+AGG - chr8.4:78826265-78826284 MS.gene022677:CDS 40.0%
GGATACTTGTACTTGTTCCT+TGG - chr8.4:78824849-78824868 MS.gene022677:CDS 40.0%
GGGAAACAGGTAATGAATCT+AGG - chr8.4:78825694-78825713 MS.gene022677:intron 40.0%
GGTCACAAAGTTGTATGGTT+TGG - chr8.4:78825308-78825327 MS.gene022677:intron 40.0%
GTGCTTCTACAAGACCATAT+TGG - chr8.4:78825886-78825905 MS.gene022677:CDS 40.0%
TCTCCTCAAGAACACTCAAA+GGG + chr8.4:78824696-78824715 None:intergenic 40.0%
TGTGAAGAGGTTTCATGAGA+TGG - chr8.4:78824726-78824745 MS.gene022677:CDS 40.0%
TGTGGAATCAAGATTAGGCT+TGG + chr8.4:78824416-78824435 None:intergenic 40.0%
! AAAGATATGGGTTGTGCTGA+AGG - chr8.4:78825772-78825791 MS.gene022677:intron 40.0%
! AAGATATGGGTTGTGCTGAA+GGG - chr8.4:78825773-78825792 MS.gene022677:intron 40.0%
! AAGGAAGCATGTGAAACTTG+GGG - chr8.4:78824643-78824662 MS.gene022677:intron 40.0%
! ACAAAGTTGTATGGTTTGGG+TGG - chr8.4:78825312-78825331 MS.gene022677:intron 40.0%
! CAAGGAAGCATGTGAAACTT+GGG - chr8.4:78824642-78824661 MS.gene022677:intron 40.0%
! TCAAGGAAGCATGTGAAACT+TGG - chr8.4:78824641-78824660 MS.gene022677:intron 40.0%
! TGTGGAGAAAAAGCATGCAA+CGG + chr8.4:78826149-78826168 None:intergenic 40.0%
!! GCATTGTTGTCAGAAGCATT+AGG - chr8.4:78825730-78825749 MS.gene022677:intron 40.0%
!! GGTTGATGATGGAATAAGCT+TGG + chr8.4:78824514-78824533 None:intergenic 40.0%
!! GTAAAAGGACTTGTTGATGC+AGG - chr8.4:78824475-78824494 MS.gene022677:CDS 40.0%
ACATTAACTACGAGAGCTCC+AGG + chr8.4:78825961-78825980 None:intergenic 45.0%
AGATGAAGGATGGTGTGAAG+AGG - chr8.4:78824713-78824732 MS.gene022677:intron 45.0%
AGCTTTACGTTCGCTGAATG+TGG + chr8.4:78824434-78824453 None:intergenic 45.0%
ATAGCTCACCAGCACTCAAT+TGG - chr8.4:78824824-78824843 MS.gene022677:CDS 45.0%
CAATGAGTCTTGAGGCATAG+TGG + chr8.4:78825262-78825281 None:intergenic 45.0%
CCTGAACCAGAAATGACTGT+GGG - chr8.4:78825829-78825848 MS.gene022677:CDS 45.0%
GAGTGTTCTTGAGGAGATGA+AGG - chr8.4:78824699-78824718 MS.gene022677:intron 45.0%
GGAGCTCTCGTAGTTAATGT+TGG - chr8.4:78825961-78825980 MS.gene022677:CDS 45.0%
GTGGTTTCTCTGTATTTGGG+AGG + chr8.4:78826232-78826251 None:intergenic 45.0%
GTTCTTGAGGAGATGAAGGA+TGG - chr8.4:78824703-78824722 MS.gene022677:intron 45.0%
GTTGTTCCCACAGTCATTTC+TGG + chr8.4:78825838-78825857 None:intergenic 45.0%
TCCTGAACCAGAAATGACTG+TGG - chr8.4:78825828-78825847 MS.gene022677:CDS 45.0%
! AGGAAGCATGTGAAACTTGG+GGG - chr8.4:78824644-78824663 MS.gene022677:intron 45.0%
!! ATTTCTGGTTCAGGACAAGG+AGG + chr8.4:78825823-78825842 None:intergenic 45.0%
!! GCTTTTTCTCCACAGGTCTT+AGG - chr8.4:78826155-78826174 MS.gene022677:CDS 45.0%
!! GTCATTTCTGGTTCAGGACA+AGG + chr8.4:78825826-78825845 None:intergenic 45.0%
!!! GTTGCATGCTTTTTCTCCAC+AGG - chr8.4:78826148-78826167 MS.gene022677:CDS 45.0%
AGGCCATCGTCCAAACTCTA+TGG - chr8.4:78826175-78826194 MS.gene022677:CDS 50.0%
CTCACCAGCACTCAATTGGA+GGG - chr8.4:78824828-78824847 MS.gene022677:CDS 50.0%
GGCTGCAAAATCAGCAACTG+TGG + chr8.4:78826251-78826270 None:intergenic 50.0%
GGTCCATAGAGTTTGGACGA+TGG + chr8.4:78826181-78826200 None:intergenic 50.0%
GTATCCCTCCAATTGAGTGC+TGG + chr8.4:78824835-78824854 None:intergenic 50.0%
!! CCCACAGTCATTTCTGGTTC+AGG + chr8.4:78825832-78825851 None:intergenic 50.0%
!! GGTCTTGTAGAAGCACTGTG+AGG + chr8.4:78825882-78825901 None:intergenic 50.0%
!! TCTTCTGGTTTGGGAGTGTC+AGG + chr8.4:78824877-78824896 None:intergenic 50.0%
ACTACGAGAGCTCCAGGTAC+AGG + chr8.4:78825955-78825974 None:intergenic 55.0%
GCTCACCAGCACTCAATTGG+AGG - chr8.4:78824827-78824846 MS.gene022677:CDS 55.0%
!! TTTGGGAGTGTCAGGAGCCA+AGG + chr8.4:78824869-78824888 None:intergenic 55.0%
GGACGATGGCCTAAGACCTG+TGG + chr8.4:78826167-78826186 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 78824394 78826327 78824394 ID=MS.gene022677
chr8.4 mRNA 78824394 78826327 78824394 ID=MS.gene022677.t1;Parent=MS.gene022677
chr8.4 exon 78825807 78826327 78825807 ID=MS.gene022677.t1.exon1;Parent=MS.gene022677.t1
chr8.4 CDS 78825807 78826327 78825807 ID=cds.MS.gene022677.t1;Parent=MS.gene022677.t1
chr8.4 exon 78824725 78825046 78824725 ID=MS.gene022677.t1.exon2;Parent=MS.gene022677.t1
chr8.4 CDS 78824725 78825046 78824725 ID=cds.MS.gene022677.t1;Parent=MS.gene022677.t1
chr8.4 exon 78824394 78824645 78824394 ID=MS.gene022677.t1.exon3;Parent=MS.gene022677.t1
chr8.4 CDS 78824394 78824645 78824394 ID=cds.MS.gene022677.t1;Parent=MS.gene022677.t1
Gene Sequence

>MS.gene022677

ATGGGAACCACTAATACAACCAAGCCTAATCTTGATTCCACATTCAGCGAACGTAAAGCTTTTGATGAAACAAAAGCAGGTGTAAAAGGACTTGTTGATGCAGGAGTTAAGAAGATACCAAGCTTATTCCATCATCAACCTGACAAATATGAGATAGCCTACAACACAAGCCATGTTATTCCTGTTATAGACCTTAAAGATATTGATAACAAAGATCCAAGTATTCATCAAGGGATTGTTAGCAAAATCAAGGAAGCATGTGAAACTTGGGGGTTTTTTCAAGTTGTTAATCATGGAATCCCTTTGAGTGTTCTTGAGGAGATGAAGGATGGTGTGAAGAGGTTTCATGAGATGGATACAGATACTAAAAAGGAGTTTTATACAAGAGATATGCATGGATCATTTATTTACAAAAGTAATTTTGATTTGTATAGCTCACCAGCACTCAATTGGAGGGATACTTGTACTTGTTCCTTGGCTCCTGACACTCCCAAACCAGAAGATTTTCCTGTTGTATGCAGGTATGTATGCATACGTATACAATTTATGTGCTCAGTGCTCCTTGAACTTTAGTTATTTTCATTGGTACAACCGACCCTTTAGATAAAGATGTGTTCAATATTTTTTATACTACTTTTTTAAATTATTGCTTGTGTCGACATGTTAGTAGTGCCTCTGATATCCATATATATAAACCAACTTATACGAAATATAAAGGCTGTGTTTGGTGTGCAAGATAATTAAGAGATAAGATAGGATAATCGTATCATATCGCATCTCAATTTAGTGTTTGATGAGAGGATATGGTATGATAAGTTAATTTTCAAACTTATTTTCTCCTATCTCTGTAGTTAAAACTTAAAAACCACTATGCCTCAAGACTCATTGTTAAACTTGTAAAAAAAATATAGCATGGTCACAAAGTTGTATGGTTTGGGTGGATTTCCATCGTTTCAAGCATAATTTCCCTTTTTTGTCCTTTAGATACTTTAACTCATATATGATTTCTGTCATCAATTAAATAATGTATCATATATGATTTCTGTCATCAATTAAATAATGTATCATATTTGTTATCTTGTCCGCGTCAAATATATTGTATGATAACTACTTATGTCTATATCATATTATTAGTCAAAGACAAATAAAATAAAATCATATCATATCCTAATGGTGCTTTATATTATATCATTTCTCTGTCATATCATATCATGTACATGTGTAGCAAATGGGTCCAAATGTCTGAAATTGAATTTAACTCTCATTTACTAATTCTTGCAGAGATATACTACTAGAATATGGGAAACAGGTAATGAATCTAGGAACTTTACTGTTTGCATTGTTGTCAGAAGCATTAGGCTTGAATCCAAACCATCTAAAAGATATGGGTTGTGCTGAAGGGCTAATTGCTCTTTGCCATTATTATCCTCCTTGTCCTGAACCAGAAATGACTGTGGGAACAACCAAGCATTGTGACAATGATTTCCTCACAGTGCTTCTACAAGACCATATTGGTGGTCTTCAAGTTCTGTATGACGACAAATGGATTGATATAACACCTGTACCTGGAGCTCTCGTAGTTAATGTTGGTGATCTTTTGCAGGCAAGTTTTATGTATTCTTATGTTTATATTGATAGAAGATGTAAGCATATAACTAATTATTTGTTTGTTTACCTTGTAGCTTATAACAAATGATAGATTCAAGAGTGTTGAACATAGAGTAGTTGCAAATCAAGTTGGTCCAAGAATATCCGTTGCATGCTTTTTCTCCACAGGTCTTAGGCCATCGTCCAAACTCTATGGACCAATAAAGGAACTATTATCAGAAAACAATCCTCCCAAATACAGAGAAACCACAGTTGCTGATTTTGCAGCCTACTTTAATGCAAAAGGACTAGATGGTACTTCTGCTCTTACACATTACAAGATTTGA
Protein sequence

>MS.gene022677.t1

MGTTNTTKPNLDSTFSERKAFDETKAGVKGLVDAGVKKIPSLFHHQPDKYEIAYNTSHVIPVIDLKDIDNKDPSIHQGIVSKIKEACETWGFFQVVNHGIPLSVLEEMKDGVKRFHEMDTDTKKEFYTRDMHGSFIYKSNFDLYSSPALNWRDTCTCSLAPDTPKPEDFPVVCRDILLEYGKQVMNLGTLLFALLSEALGLNPNHLKDMGCAEGLIALCHYYPPCPEPEMTVGTTKHCDNDFLTVLLQDHIGGLQVLYDDKWIDITPVPGALVVNVGDLLQLITNDRFKSVEHRVVANQVGPRISVACFFSTGLRPSSKLYGPIKELLSENNPPKYRETTVADFAAYFNAKGLDGTSALTHYKI