Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020057.t1 | XP_003626825.1 | 97.2 | 605 | 15 | 1 | 1 | 603 | 1 | 605 | 0.00E+00 | 1162.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020057.t1 | Q9SIU0 | 84.1 | 597 | 89 | 2 | 6 | 600 | 5 | 597 | 1.3e-289 | 996.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020057.t1 | G7LDG5 | 97.2 | 605 | 15 | 1 | 1 | 603 | 1 | 605 | 0.0e+00 | 1162.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023832 | MS.gene020057 | PPI |
| MS.gene015800 | MS.gene020057 | PPI |
| MS.gene40254 | MS.gene020057 | PPI |
| MS.gene72021 | MS.gene020057 | PPI |
| MS.gene019525 | MS.gene020057 | PPI |
| MS.gene020057 | MS.gene36359 | PPI |
| MS.gene52200 | MS.gene020057 | PPI |
| MS.gene020057 | MS.gene27680 | PPI |
| MS.gene27682 | MS.gene020057 | PPI |
| MS.gene05873 | MS.gene020057 | PPI |
| MS.gene055731 | MS.gene020057 | PPI |
| MS.gene27681 | MS.gene020057 | PPI |
| MS.gene58341 | MS.gene020057 | PPI |
| MS.gene020057 | MS.gene055730 | PPI |
| MS.gene40704 | MS.gene020057 | PPI |
| MS.gene055729 | MS.gene020057 | PPI |
| MS.gene014608 | MS.gene020057 | PPI |
| MS.gene072226 | MS.gene020057 | PPI |
| MS.gene011059 | MS.gene020057 | PPI |
| MS.gene36748 | MS.gene020057 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020057.t1 | MTR_8g009500 | 97.190 | 605 | 15 | 1 | 1 | 603 | 1 | 605 | 0.0 | 1202 |
| MS.gene020057.t1 | MTR_8g009500 | 98.807 | 503 | 6 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1025 |
| MS.gene020057.t1 | MTR_8g009500 | 97.260 | 511 | 12 | 1 | 95 | 603 | 1 | 511 | 0.0 | 1007 |
| MS.gene020057.t1 | MTR_8g032040 | 65.799 | 576 | 187 | 5 | 30 | 602 | 13 | 581 | 0.0 | 788 |
| MS.gene020057.t1 | MTR_7g076650 | 65.125 | 562 | 189 | 3 | 44 | 603 | 23 | 579 | 0.0 | 768 |
| MS.gene020057.t1 | MTR_7g076650 | 61.167 | 600 | 188 | 4 | 44 | 603 | 23 | 617 | 0.0 | 751 |
| MS.gene020057.t1 | MTR_7g076650 | 67.258 | 507 | 160 | 3 | 33 | 539 | 13 | 513 | 0.0 | 712 |
| MS.gene020057.t1 | MTR_8g014390 | 40.493 | 568 | 288 | 12 | 28 | 586 | 36 | 562 | 2.96e-136 | 410 |
| MS.gene020057.t1 | MTR_3g110330 | 41.899 | 537 | 282 | 10 | 54 | 586 | 42 | 552 | 8.03e-136 | 408 |
| MS.gene020057.t1 | MTR_2g101040 | 41.197 | 568 | 284 | 12 | 28 | 586 | 89 | 615 | 2.81e-135 | 410 |
| MS.gene020057.t1 | MTR_2g101040 | 41.197 | 568 | 284 | 12 | 28 | 586 | 123 | 649 | 3.59e-135 | 410 |
| MS.gene020057.t1 | MTR_2g101040 | 41.135 | 564 | 282 | 12 | 28 | 582 | 89 | 611 | 9.83e-135 | 408 |
| MS.gene020057.t1 | MTR_8g102620 | 42.644 | 537 | 278 | 9 | 54 | 586 | 55 | 565 | 3.38e-134 | 405 |
| MS.gene020057.t1 | MTR_2g101040 | 39.597 | 596 | 282 | 14 | 28 | 586 | 89 | 643 | 8.18e-131 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020057.t1 | AT2G13560 | 84.932 | 584 | 82 | 2 | 19 | 600 | 18 | 597 | 0.0 | 1019 |
| MS.gene020057.t1 | AT4G00570 | 64.884 | 561 | 187 | 3 | 44 | 602 | 32 | 584 | 0.0 | 755 |
| MS.gene020057.t1 | AT5G25880 | 42.272 | 537 | 280 | 10 | 54 | 586 | 52 | 562 | 7.92e-138 | 414 |
| MS.gene020057.t1 | AT5G25880 | 42.505 | 527 | 273 | 10 | 54 | 576 | 52 | 552 | 9.80e-138 | 413 |
| MS.gene020057.t1 | AT2G19900 | 42.272 | 537 | 280 | 9 | 54 | 586 | 45 | 555 | 6.71e-137 | 411 |
| MS.gene020057.t1 | AT1G79750 | 43.017 | 537 | 276 | 10 | 54 | 586 | 110 | 620 | 8.29e-137 | 413 |
| MS.gene020057.t1 | AT5G11670 | 41.527 | 537 | 284 | 9 | 54 | 586 | 52 | 562 | 1.01e-131 | 398 |
| MS.gene020057.t1 | AT2G19900 | 43.404 | 470 | 246 | 8 | 121 | 586 | 3 | 456 | 1.36e-123 | 374 |
| MS.gene020057.t1 | AT5G25880 | 42.593 | 432 | 221 | 8 | 54 | 483 | 52 | 458 | 7.04e-116 | 355 |
Find 142 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGAAGCATTCTCCATTT+TGG | 0.169548 | 8.3:-76839178 | MS.gene020057:CDS |
| TGCTGTTATAGATGAGTTTA+TGG | 0.175785 | 8.3:-76842472 | MS.gene020057:CDS |
| TTTGCAGGAAATGGTAATAT+TGG | 0.231427 | 8.3:-76837829 | MS.gene020057:intron |
| GTTGCAATTGCTGGACTTCT+AGG | 0.233797 | 8.3:-76841840 | MS.gene020057:CDS |
| TACAGATGGGAGCAGAATTC+TGG | 0.237038 | 8.3:-76843942 | MS.gene020057:CDS |
| TGCAAGGAATTTGAAAGAAA+TGG | 0.244826 | 8.3:-76840845 | MS.gene020057:CDS |
| CAAGGAATTGGCATTACTAT+TGG | 0.271734 | 8.3:-76843899 | MS.gene020057:CDS |
| TATAATGTTGTCGCCCAAAA+TGG | 0.295757 | 8.3:+76839164 | None:intergenic |
| TGGATTTGACATGGCAAATA+TGG | 0.313389 | 8.3:+76839322 | None:intergenic |
| CGCCACTTGGCCAGTGCATT+AGG | 0.321819 | 8.3:+76845864 | None:intergenic |
| ACAGCTGGTGTTGCAATTGC+TGG | 0.329137 | 8.3:-76841849 | MS.gene020057:CDS |
| CCGTTTAGTAATGTTGATCT+TGG | 0.334310 | 8.3:-76839126 | MS.gene020057:intron |
| GATCTTGGAGTTCAAGGAAT+TGG | 0.345793 | 8.3:-76843911 | MS.gene020057:CDS |
| GCTCAAGGATCGTATGTTAC+AGG | 0.351070 | 8.3:-76837641 | MS.gene020057:CDS |
| AGAGTGCAAAGAGTCAATTT+TGG | 0.357216 | 8.3:-76841284 | MS.gene020057:CDS |
| AAGGAATTGGCATTACTATT+GGG | 0.364280 | 8.3:-76843898 | MS.gene020057:CDS |
| CTTGCAAAAGGAAGGGCATC+TGG | 0.369192 | 8.3:+76840862 | None:intergenic |
| ATTCTGGGACTTGGAGATCT+TGG | 0.371211 | 8.3:-76843926 | MS.gene020057:CDS |
| AGCAAACCTACCCTGGAAAT+AGG | 0.377370 | 8.3:+76837779 | None:intergenic |
| AATACCTGTACAATCACATT+TGG | 0.382169 | 8.3:+76842429 | None:intergenic |
| TTGCAGCAGCATCGCCTTGA+TGG | 0.391714 | 8.3:-76842507 | MS.gene020057:CDS |
| GAGCAGCCACATACTCTTTG+AGG | 0.392718 | 8.3:+76843839 | None:intergenic |
| AACAACATGTACCTATTTCC+AGG | 0.393408 | 8.3:-76837790 | MS.gene020057:CDS |
| CTATAACTGGCCAGCTGAGC+AGG | 0.395936 | 8.3:-76844714 | MS.gene020057:intron |
| TGTTGATGTTGAACCCTTGA+GGG | 0.403574 | 8.3:+76839352 | None:intergenic |
| TGATGTCCATGGTCTATAAC+TGG | 0.411552 | 8.3:-76844727 | MS.gene020057:CDS |
| CTTGGAGATCTTGGAGTTCA+AGG | 0.414396 | 8.3:-76843917 | MS.gene020057:CDS |
| TCGACATTCTTCATGATCCT+TGG | 0.414537 | 8.3:-76848414 | MS.gene020057:CDS |
| GCAACAACTATCTTCTGCTT+GGG | 0.418709 | 8.3:+76841780 | None:intergenic |
| TTATTTATACCATTCTTTGT+TGG | 0.419412 | 8.3:+76839302 | None:intergenic |
| CTAGGTATTGGAGGCCCTCA+AGG | 0.420742 | 8.3:-76839366 | MS.gene020057:intron |
| AACTTACCCGACTTAGTTTG+CGG | 0.421680 | 8.3:+76836767 | None:intergenic |
| GATCTATATGTTGCTGCTGC+TGG | 0.424864 | 8.3:-76843869 | MS.gene020057:CDS |
| TTGCTCCTTCCCTTAGTCCT+TGG | 0.432962 | 8.3:+76840818 | None:intergenic |
| AAAATGGAGAATGCTTCGTC+AGG | 0.436830 | 8.3:+76839180 | None:intergenic |
| AAATGGATCGCCAAGGACTA+AGG | 0.437660 | 8.3:-76840828 | MS.gene020057:CDS |
| AAGATAGTTGTTGCTGGTGC+TGG | 0.439089 | 8.3:-76841771 | MS.gene020057:CDS |
| GATTTAAAGACCTGCTCAGC+TGG | 0.439436 | 8.3:+76844704 | None:intergenic |
| TGCTTGGGGAAGTCAATCAT+TGG | 0.442318 | 8.3:+76841795 | None:intergenic |
| CATTTCTACCTTGATATTGA+AGG | 0.442872 | 8.3:+76836970 | None:intergenic |
| TTCCTGTGATGATTGACGTT+GGG | 0.445155 | 8.3:-76843256 | MS.gene020057:CDS |
| CTCCTAGGACTATCTGCTGT+TGG | 0.448226 | 8.3:-76839711 | MS.gene020057:CDS |
| GATAGTCCTAGGAGGACATC+AGG | 0.454256 | 8.3:+76839720 | None:intergenic |
| CTCCGTTTATGAACGATAGT+TGG | 0.455677 | 8.3:+76848439 | None:intergenic |
| GGGAGCAGAATTCTGGGACT+TGG | 0.457800 | 8.3:-76843935 | MS.gene020057:CDS |
| ACAGATGGGAGCAGAATTCT+GGG | 0.459014 | 8.3:-76843941 | MS.gene020057:CDS |
| ATCTCGTTCTGTCATGGAAA+AGG | 0.463071 | 8.3:+76846324 | None:intergenic |
| TGGTAGTGGTTGATCTGAAA+AGG | 0.465328 | 8.3:-76845920 | MS.gene020057:intron |
| ACTGTTGGAGTATATACTAT+TGG | 0.467180 | 8.3:+76844830 | None:intergenic |
| AAACGCTCAATCTGCACGTC+AGG | 0.469649 | 8.3:+76846259 | None:intergenic |
| ATAGGTACATGTTGTTTCCC+TGG | 0.472498 | 8.3:+76837797 | None:intergenic |
| TCTTTCAAATTCCTTGCAAA+AGG | 0.472671 | 8.3:+76840850 | None:intergenic |
| TGCAGCAGCATCGCCTTGAT+GGG | 0.473784 | 8.3:-76842506 | MS.gene020057:CDS |
| TACTACTGCAGTGCTGGAAT+CGG | 0.477528 | 8.3:-76841369 | MS.gene020057:intron |
| TCAAATTCCTTGCAAAAGGA+AGG | 0.481202 | 8.3:+76840854 | None:intergenic |
| CTTGTATGTCAGAACTATAG+TGG | 0.485090 | 8.3:-76844803 | MS.gene020057:CDS |
| ATGTCAAATCCAACAAAGAA+TGG | 0.485534 | 8.3:-76839311 | MS.gene020057:intron |
| CCAAGATCAACATTACTAAA+CGG | 0.486720 | 8.3:+76839126 | None:intergenic |
| TCTCTACCCCAGGGGACAGC+TGG | 0.486859 | 8.3:-76841864 | MS.gene020057:intron |
| AGCAACAACTATCTTCTGCT+TGG | 0.489107 | 8.3:+76841779 | None:intergenic |
| AGCAGAAGGATATCATGAAA+TGG | 0.489300 | 8.3:-76836803 | MS.gene020057:CDS |
| TCGGTTTAGTATTCGCCACT+TGG | 0.489619 | 8.3:+76845851 | None:intergenic |
| CTAGGACTATCTGCTGTTGG+AGG | 0.492913 | 8.3:-76839708 | MS.gene020057:CDS |
| GCACATCATCATTAAACATT+CGG | 0.495254 | 8.3:+76842244 | None:intergenic |
| TGGAAGCTGTCTTTACTCGC+TGG | 0.495700 | 8.3:-76842452 | MS.gene020057:CDS |
| AATATTGGACACTGCAACCA+GGG | 0.501417 | 8.3:-76837814 | MS.gene020057:CDS |
| AGAGCTCCGCAAACTAAGTC+GGG | 0.501871 | 8.3:-76836773 | MS.gene020057:intron |
| AAGCAGAAGATAGTTGTTGC+TGG | 0.502605 | 8.3:-76841777 | MS.gene020057:CDS |
| GTCCAACTATCGTTCATAAA+CGG | 0.504904 | 8.3:-76848441 | MS.gene020057:CDS |
| AATCACCGCCGGTGAGGACG+TGG | 0.518417 | 8.3:+76848506 | None:intergenic |
| CTAGGTGCTGTAAGAGCTCA+AGG | 0.520317 | 8.3:-76841822 | MS.gene020057:CDS |
| CTGGCCAAATGTGATTGTAC+AGG | 0.520962 | 8.3:-76842433 | MS.gene020057:intron |
| CAAATTCCTTGCAAAAGGAA+GGG | 0.521173 | 8.3:+76840855 | None:intergenic |
| GTGAAGAAGAGGTTCTCAAA+GGG | 0.522056 | 8.3:-76837002 | MS.gene020057:CDS |
| ATTTCTACCTTGATATTGAA+GGG | 0.522938 | 8.3:+76836971 | None:intergenic |
| ACGTCAGGAGACACAACATT+TGG | 0.524491 | 8.3:+76846274 | None:intergenic |
| CTCAAACGCCACGTCCTCAC+CGG | 0.530207 | 8.3:-76848514 | MS.gene020057:CDS |
| CTCCAACAGCAGATAGTCCT+AGG | 0.532338 | 8.3:+76839709 | None:intergenic |
| GATATGATTGTAGTTACAGA+TGG | 0.537955 | 8.3:-76843956 | MS.gene020057:CDS |
| AAAACAATGGCAAGGATGCT+GGG | 0.541419 | 8.3:-76841327 | MS.gene020057:CDS |
| GCACTGAAATACATTCCTCT+TGG | 0.543451 | 8.3:+76844767 | None:intergenic |
| TCAGGAGACACAACATTTGG+AGG | 0.547588 | 8.3:+76846277 | None:intergenic |
| ACCTTCTGATCCTAATGCAC+TGG | 0.547636 | 8.3:-76845874 | MS.gene020057:CDS |
| TAGGTATTGGAGGCCCTCAA+GGG | 0.547927 | 8.3:-76839365 | MS.gene020057:CDS |
| CAAGATAGTCATCCCCATCA+AGG | 0.552456 | 8.3:+76842493 | None:intergenic |
| GAGACGATCTCGTTCTGTCA+TGG | 0.554372 | 8.3:+76846318 | None:intergenic |
| GAGAGCTCCGCAAACTAAGT+CGG | 0.559084 | 8.3:-76836774 | MS.gene020057:CDS |
| AATGTTTAATGATGATGTGC+AGG | 0.562033 | 8.3:-76842241 | MS.gene020057:intron |
| CGTTTGAGTCGTTGAAGTAA+CGG | 0.562516 | 8.3:+76848529 | None:intergenic |
| TATAGAAGAAGCTGTGGAGG+AGG | 0.562863 | 8.3:-76836830 | MS.gene020057:CDS |
| GTGAAGCCTGATGTCCTCCT+AGG | 0.564961 | 8.3:-76839726 | MS.gene020057:CDS |
| AGGAGCAAGTCTCGCAGAAG+TGG | 0.572831 | 8.3:-76840803 | MS.gene020057:intron |
| AATGGATCGCCAAGGACTAA+GGG | 0.573558 | 8.3:-76840827 | MS.gene020057:CDS |
| ATAGTATATACTCCAACAGT+AGG | 0.579352 | 8.3:-76844827 | MS.gene020057:CDS |
| CGATCTTTCACTACGATGGA+AGG | 0.580755 | 8.3:-76848469 | MS.gene020057:CDS |
| TGCATATATGAGTGAAGAAG+AGG | 0.581793 | 8.3:-76837013 | MS.gene020057:CDS |
| GCCAGTGCATTAGGATCAGA+AGG | 0.582116 | 8.3:+76845873 | None:intergenic |
| GTCCCAACGTCAATCATCAC+AGG | 0.582608 | 8.3:+76843254 | None:intergenic |
| CTTGAAGTTCAAGCAAGAGA+TGG | 0.582823 | 8.3:-76845897 | MS.gene020057:CDS |
| TGTTATAGAAGAAGCTGTGG+AGG | 0.584699 | 8.3:-76836833 | MS.gene020057:CDS |
| TCTCATTTCTGCCATGCAGT+CGG | 0.584817 | 8.3:+76845832 | None:intergenic |
| AAATGGAGAATGCTTCGTCA+GGG | 0.585250 | 8.3:+76839181 | None:intergenic |
| TTGTATGTCAGAACTATAGT+GGG | 0.587455 | 8.3:-76844802 | MS.gene020057:CDS |
| AGTGAAGAAGAGGTTCTCAA+AGG | 0.587972 | 8.3:-76837003 | MS.gene020057:CDS |
| TTGTTGATGTTGAACCCTTG+AGG | 0.590382 | 8.3:+76839351 | None:intergenic |
| TTTGACATGGCAAATATGGC+TGG | 0.591614 | 8.3:+76839326 | None:intergenic |
| TAATATTGGACACTGCAACC+AGG | 0.593488 | 8.3:-76837815 | MS.gene020057:CDS |
| TGACATACAAGACCTACTGT+TGG | 0.598875 | 8.3:+76844815 | None:intergenic |
| GACAACATTATATTTGCTAG+TGG | 0.603217 | 8.3:-76839153 | MS.gene020057:CDS |
| GTGGAGGAGGATCTAGCAGA+AGG | 0.606861 | 8.3:-76836817 | MS.gene020057:CDS |
| CGAATACTAAACCGACTGCA+TGG | 0.609715 | 8.3:-76845843 | MS.gene020057:CDS |
| TCGTGGAGAAATGATGTCCA+TGG | 0.612816 | 8.3:-76844738 | MS.gene020057:CDS |
| ATTCTTTGTTGGATTTGACA+TGG | 0.615831 | 8.3:+76839313 | None:intergenic |
| AGCTGGCCAGTTATAGACCA+TGG | 0.616327 | 8.3:+76844721 | None:intergenic |
| CTTCCTGTGATGATTGACGT+TGG | 0.616370 | 8.3:-76843257 | MS.gene020057:CDS |
| GTGCTGTAAGAGCTCAAGGA+AGG | 0.620608 | 8.3:-76841818 | MS.gene020057:CDS |
| TATTTCAGTGCTGAGGATCG+TGG | 0.621203 | 8.3:-76844755 | MS.gene020057:CDS |
| ATGCAGGGATTAATCACAGA+AGG | 0.622254 | 8.3:-76840901 | MS.gene020057:intron |
| TGGAGGATTGTTCTCAAGCG+AGG | 0.623454 | 8.3:-76839691 | MS.gene020057:intron |
| ATCCTAATGCACTGGCCAAG+TGG | 0.624552 | 8.3:-76845866 | MS.gene020057:CDS |
| ACAACATGTACCTATTTCCA+GGG | 0.625477 | 8.3:-76837789 | MS.gene020057:intron |
| GTCGCGATCTTTCACTACGA+TGG | 0.627814 | 8.3:-76848473 | MS.gene020057:CDS |
| CAGAATTCGAGATATTACAA+AGG | 0.629110 | 8.3:-76836869 | MS.gene020057:CDS |
| CAACAACTATCTTCTGCTTG+GGG | 0.630847 | 8.3:+76841781 | None:intergenic |
| TTACGCACTTTATTGAACCA+AGG | 0.636960 | 8.3:+76848397 | None:intergenic |
| ATATGATTGTAGTTACAGAT+GGG | 0.637411 | 8.3:-76843955 | MS.gene020057:CDS |
| AGGAATGTATTTCAGTGCTG+AGG | 0.642678 | 8.3:-76844762 | MS.gene020057:CDS |
| TGAAGTAATCACCGCCGGTG+AGG | 0.643325 | 8.3:+76848500 | None:intergenic |
| TTGAAAGAAATGGATCGCCA+AGG | 0.643697 | 8.3:-76840835 | MS.gene020057:CDS |
| ATCATCATTAAACATTCGGT+AGG | 0.645608 | 8.3:+76842248 | None:intergenic |
| GCAGCAGCATCGCCTTGATG+GGG | 0.650636 | 8.3:-76842505 | MS.gene020057:CDS |
| GATCGCCAAGGACTAAGGGA+AGG | 0.655509 | 8.3:-76840823 | MS.gene020057:CDS |
| CAGTATGAAGTAATCACCGC+CGG | 0.658289 | 8.3:+76848495 | None:intergenic |
| AAACGCCACGTCCTCACCGG+CGG | 0.658879 | 8.3:-76848511 | MS.gene020057:CDS |
| TAGTTGTTGCTGGTGCTGGA+AGG | 0.660614 | 8.3:-76841767 | MS.gene020057:intron |
| AATGGAGAATGCTTCGTCAG+GGG | 0.673016 | 8.3:+76839182 | None:intergenic |
| AGCTGTTATAGAAGAAGCTG+TGG | 0.673871 | 8.3:-76836836 | MS.gene020057:CDS |
| GGGCTGTTCAGAAGACCAAG+AGG | 0.697115 | 8.3:-76844782 | MS.gene020057:CDS |
| CAACAGCAGATAGTCCTAGG+AGG | 0.697965 | 8.3:+76839712 | None:intergenic |
| TGTTACAGGCTGCTGCTGAG+CGG | 0.717545 | 8.3:-76837627 | MS.gene020057:CDS |
| GAGACGATGATGATCTCGCG+CGG | 0.721970 | 8.3:+76848551 | None:intergenic |
| CGAGATCGTCTCGATCTACG+AGG | 0.743043 | 8.3:-76846307 | MS.gene020057:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 76836639 | 76848590 | 76836639 | ID=MS.gene020057 |
| chr8.3 | mRNA | 76836639 | 76848590 | 76836639 | ID=MS.gene020057.t1;Parent=MS.gene020057 |
| chr8.3 | exon | 76848405 | 76848590 | 76848405 | ID=MS.gene020057.t1.exon1;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76848405 | 76848590 | 76848405 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76846257 | 76846353 | 76846257 | ID=MS.gene020057.t1.exon2;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76846257 | 76846353 | 76846257 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76845818 | 76845936 | 76845818 | ID=MS.gene020057.t1.exon3;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76845818 | 76845936 | 76845818 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76844715 | 76844882 | 76844715 | ID=MS.gene020057.t1.exon4;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76844715 | 76844882 | 76844715 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76843853 | 76843981 | 76843853 | ID=MS.gene020057.t1.exon5;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76843853 | 76843981 | 76843853 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76843222 | 76843282 | 76843222 | ID=MS.gene020057.t1.exon6;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76843222 | 76843282 | 76843222 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76842434 | 76842537 | 76842434 | ID=MS.gene020057.t1.exon7;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76842434 | 76842537 | 76842434 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76842242 | 76842325 | 76842242 | ID=MS.gene020057.t1.exon8;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76842242 | 76842325 | 76842242 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76841768 | 76841874 | 76841768 | ID=MS.gene020057.t1.exon9;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76841768 | 76841874 | 76841768 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76841269 | 76841380 | 76841269 | ID=MS.gene020057.t1.exon10;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76841269 | 76841380 | 76841269 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76840804 | 76840917 | 76840804 | ID=MS.gene020057.t1.exon11;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76840804 | 76840917 | 76840804 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76839692 | 76839757 | 76839692 | ID=MS.gene020057.t1.exon12;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76839692 | 76839757 | 76839692 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76839312 | 76839384 | 76839312 | ID=MS.gene020057.t1.exon13;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76839312 | 76839384 | 76839312 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76839127 | 76839213 | 76839127 | ID=MS.gene020057.t1.exon14;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76839127 | 76839213 | 76839127 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76837790 | 76837844 | 76837790 | ID=MS.gene020057.t1.exon15;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76837790 | 76837844 | 76837790 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76837624 | 76837689 | 76837624 | ID=MS.gene020057.t1.exon16;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76837624 | 76837689 | 76837624 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76836979 | 76837041 | 76836979 | ID=MS.gene020057.t1.exon17;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76836979 | 76837041 | 76836979 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76836774 | 76836888 | 76836774 | ID=MS.gene020057.t1.exon18;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76836774 | 76836888 | 76836774 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| chr8.3 | exon | 76836639 | 76836644 | 76836639 | ID=MS.gene020057.t1.exon19;Parent=MS.gene020057.t1 |
| chr8.3 | CDS | 76836639 | 76836644 | 76836639 | ID=cds.MS.gene020057.t1;Parent=MS.gene020057.t1 |
| Gene Sequence |
| Protein sequence |
