Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014608.t1 | XP_013462050.1 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1144.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014608.t1 | P12628 | 92.2 | 575 | 43 | 1 | 4 | 578 | 17 | 589 | 4.8e-310 | 1064.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014608.t1 | A0A072VD34 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1144.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019525 | MS.gene014608 | PPI |
| MS.gene08581 | MS.gene014608 | PPI |
| MS.gene014608 | MS.gene055729 | PPI |
| MS.gene014608 | MS.gene27680 | PPI |
| MS.gene014608 | MS.gene52200 | PPI |
| MS.gene014608 | MS.gene39348 | PPI |
| MS.gene58341 | MS.gene014608 | PPI |
| MS.gene014608 | MS.gene022694 | PPI |
| MS.gene014608 | MS.gene004152 | PPI |
| MS.gene014608 | MS.gene055731 | PPI |
| MS.gene014608 | MS.gene055730 | PPI |
| MS.gene014608 | MS.gene27682 | PPI |
| MS.gene014608 | MS.gene65276 | PPI |
| MS.gene014608 | MS.gene39666 | PPI |
| MS.gene014608 | MS.gene023832 | PPI |
| MS.gene014608 | MS.gene020057 | PPI |
| MS.gene014608 | MS.gene27681 | PPI |
| MS.gene014608 | MS.gene049858 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014608.t1 | MTR_3g110330 | 99.481 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1184 |
| MS.gene014608.t1 | MTR_8g102620 | 84.588 | 571 | 88 | 0 | 8 | 578 | 21 | 591 | 0.0 | 1011 |
| MS.gene014608.t1 | MTR_8g014390 | 81.371 | 569 | 106 | 0 | 10 | 578 | 20 | 588 | 0.0 | 972 |
| MS.gene014608.t1 | MTR_2g101040 | 81.514 | 568 | 105 | 0 | 11 | 578 | 108 | 675 | 0.0 | 970 |
| MS.gene014608.t1 | MTR_2g101040 | 77.852 | 596 | 104 | 1 | 11 | 578 | 74 | 669 | 0.0 | 956 |
| MS.gene014608.t1 | MTR_2g101040 | 81.541 | 558 | 103 | 0 | 11 | 568 | 74 | 631 | 0.0 | 951 |
| MS.gene014608.t1 | MTR_2g101040 | 81.667 | 540 | 99 | 0 | 11 | 550 | 74 | 613 | 0.0 | 918 |
| MS.gene014608.t1 | MTR_7g076650 | 41.725 | 568 | 296 | 9 | 39 | 574 | 30 | 594 | 6.59e-149 | 442 |
| MS.gene014608.t1 | MTR_8g032040 | 41.270 | 567 | 300 | 9 | 39 | 574 | 33 | 597 | 1.08e-147 | 439 |
| MS.gene014608.t1 | MTR_8g009500 | 42.004 | 569 | 292 | 11 | 42 | 574 | 54 | 620 | 2.81e-146 | 436 |
| MS.gene014608.t1 | MTR_7g076650 | 39.109 | 606 | 296 | 10 | 39 | 574 | 30 | 632 | 2.70e-141 | 424 |
| MS.gene014608.t1 | MTR_7g076650 | 43.788 | 491 | 253 | 7 | 39 | 508 | 30 | 518 | 1.72e-137 | 410 |
| MS.gene014608.t1 | MTR_8g009500 | 42.520 | 508 | 264 | 10 | 93 | 574 | 21 | 526 | 1.33e-132 | 398 |
| MS.gene014608.t1 | MTR_8g009500 | 42.667 | 450 | 231 | 8 | 42 | 466 | 54 | 501 | 1.79e-122 | 371 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014608.t1 | AT5G25880 | 84.238 | 571 | 90 | 0 | 8 | 578 | 18 | 588 | 0.0 | 1019 |
| MS.gene014608.t1 | AT5G11670 | 82.753 | 574 | 99 | 0 | 5 | 578 | 15 | 588 | 0.0 | 984 |
| MS.gene014608.t1 | AT5G25880 | 84.346 | 543 | 85 | 0 | 8 | 550 | 18 | 560 | 0.0 | 970 |
| MS.gene014608.t1 | AT1G79750 | 80.492 | 569 | 111 | 0 | 10 | 578 | 78 | 646 | 0.0 | 969 |
| MS.gene014608.t1 | AT2G19900 | 80.277 | 578 | 114 | 0 | 1 | 578 | 4 | 581 | 0.0 | 964 |
| MS.gene014608.t1 | AT2G19900 | 82.988 | 482 | 82 | 0 | 97 | 578 | 1 | 482 | 0.0 | 826 |
| MS.gene014608.t1 | AT5G25880 | 84.910 | 444 | 67 | 0 | 8 | 451 | 18 | 461 | 0.0 | 805 |
| MS.gene014608.t1 | AT4G00570 | 42.553 | 564 | 294 | 9 | 39 | 574 | 39 | 600 | 1.15e-150 | 446 |
| MS.gene014608.t1 | AT2G13560 | 43.106 | 573 | 286 | 12 | 39 | 574 | 46 | 615 | 3.17e-150 | 446 |
Find 120 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCCTCCAACTAATTTA+AGG | 0.155600 | 3.1:-88353614 | None:intergenic |
| TCATAATGCTTTCGATCTTC+TGG | 0.247214 | 3.1:+88353416 | MS.gene014608:CDS |
| CAGTTGCTCGCTTCTGTCTA+AGG | 0.286661 | 3.1:-88353099 | None:intergenic |
| GGTGGTGTTAAGGACCTTTA+TGG | 0.303206 | 3.1:+88351388 | MS.gene014608:CDS |
| GACCACACATTCTTATTCTT+AGG | 0.314902 | 3.1:+88353642 | MS.gene014608:CDS |
| CTTTCTCTCTATACTGCATT+AGG | 0.318484 | 3.1:+88352878 | MS.gene014608:CDS |
| CTTGCTTCCCTTAAATTAGT+TGG | 0.327881 | 3.1:+88353606 | MS.gene014608:CDS |
| GACTGATGGTGAGCGAATAT+TGG | 0.334124 | 3.1:+88352675 | MS.gene014608:CDS |
| CATAGCATTGATGGATCTTC+AGG | 0.341593 | 3.1:+88352265 | MS.gene014608:CDS |
| CAACGGTAGCTTCGATAGCC+TGG | 0.348683 | 3.1:-88355747 | None:intergenic |
| CATGCAGTTAAGCAGAACTA+TGG | 0.350006 | 3.1:+88353274 | MS.gene014608:CDS |
| CTTAGACAGAAGCGAGCAAC+TGG | 0.354222 | 3.1:+88353100 | MS.gene014608:CDS |
| TGTCTTCACTCAAGAGCTTC+AGG | 0.358072 | 3.1:+88352069 | MS.gene014608:CDS |
| GTGCCAACATCAATGGTTAT+AGG | 0.362681 | 3.1:-88353037 | None:intergenic |
| AGTTCCTCCAACTAATTTAA+GGG | 0.376258 | 3.1:-88353613 | None:intergenic |
| TCATATTCAACGGGGTCAAA+TGG | 0.380214 | 3.1:-88354958 | None:intergenic |
| GATCAAACCCAAACCAAATC+CGG | 0.382208 | 3.1:-88355135 | None:intergenic |
| AGCTCTTGAGATTTCAAAAC+AGG | 0.383791 | 3.1:+88353976 | MS.gene014608:CDS |
| ATTTAAAACAGCTGAAGCTT+TGG | 0.390871 | 3.1:+88355453 | MS.gene014608:intron |
| TTCTTAGTTCTTACTGAAGA+AGG | 0.391345 | 3.1:-88352911 | None:intergenic |
| CCTTCACAGGTTCATGCTCA+TGG | 0.394386 | 3.1:-88354441 | None:intergenic |
| TCACAAGTACATAGCATTGA+TGG | 0.394588 | 3.1:+88352256 | MS.gene014608:CDS |
| AAATTTCCTTCATATTCAAC+GGG | 0.404690 | 3.1:-88354967 | None:intergenic |
| GGTTTGGGTTTGATCATCTC+TGG | 0.424457 | 3.1:+88355143 | MS.gene014608:CDS |
| ATATTGGGACTAGGCGATCT+TGG | 0.426877 | 3.1:+88352691 | MS.gene014608:CDS |
| TGCACTCAGATTGTGAAGTT+GGG | 0.436411 | 3.1:-88354789 | None:intergenic |
| ATTGTTTGTGCCAACATCAA+TGG | 0.437244 | 3.1:-88353044 | None:intergenic |
| TGGTGTTGGTGGTGGTGTTA+AGG | 0.439696 | 3.1:+88351378 | MS.gene014608:CDS |
| GTGCACTCAGATTGTGAAGT+TGG | 0.441100 | 3.1:-88354790 | None:intergenic |
| TAGAGAGAAAGTTTCCCAAC+AGG | 0.441390 | 3.1:-88352866 | None:intergenic |
| ACATTCTTATTCTTAGGAGC+TGG | 0.443261 | 3.1:+88353648 | MS.gene014608:CDS |
| TGGCTATTGAAGGCTGGAAC+TGG | 0.448999 | 3.1:+88353938 | MS.gene014608:intron |
| TGACAGGCTTCTCCAACTGT+TGG | 0.449408 | 3.1:-88352451 | None:intergenic |
| TTTGTGAATGGTGTTGGTGG+TGG | 0.450515 | 3.1:+88351370 | MS.gene014608:CDS |
| ATCTCTTTCTTTCTCAGTGA+AGG | 0.452812 | 3.1:-88352014 | None:intergenic |
| AAGCATTTATAGGCGTCCTC+AGG | 0.456871 | 3.1:+88352483 | MS.gene014608:CDS |
| ATCTTTCTGATATTTGTGAA+TGG | 0.469748 | 3.1:-88355523 | None:intergenic |
| AAAATTTCCTTCATATTCAA+CGG | 0.477281 | 3.1:-88354968 | None:intergenic |
| CTTCACAGGTTCATGCTCAT+GGG | 0.481605 | 3.1:-88354440 | None:intergenic |
| ATCGCAGGAGAACTATGATA+AGG | 0.484539 | 3.1:+88355486 | MS.gene014608:CDS |
| CATATTCAACGGGGTCAAAT+GGG | 0.484561 | 3.1:-88354957 | None:intergenic |
| GTATGAATGTACCTCATTCA+AGG | 0.487503 | 3.1:-88354663 | None:intergenic |
| ACTGATGGTGAGCGAATATT+GGG | 0.489006 | 3.1:+88352676 | MS.gene014608:CDS |
| TGAAGACAGCAGGAGGCAAA+AGG | 0.489689 | 3.1:-88352054 | None:intergenic |
| AAGATCGAAAGCATTATGAT+TGG | 0.489691 | 3.1:-88353412 | None:intergenic |
| TCGCAGGAGAACTATGATAA+GGG | 0.490559 | 3.1:+88355487 | MS.gene014608:CDS |
| TCTTAGTTCTTACTGAAGAA+GGG | 0.494272 | 3.1:-88352910 | None:intergenic |
| TTTGACCCCGTTGAATATGA+AGG | 0.494852 | 3.1:+88354961 | MS.gene014608:CDS |
| CATGGCTTCAACAACCTCCT+TGG | 0.497775 | 3.1:-88354636 | None:intergenic |
| ACTAGGCGATCTTGGTTGCC+AGG | 0.500190 | 3.1:+88352699 | MS.gene014608:CDS |
| TTCTGATATTTGTGAATGGA+GGG | 0.500345 | 3.1:-88355519 | None:intergenic |
| TAGCACTATCCTCACCATAA+AGG | 0.502501 | 3.1:-88351402 | None:intergenic |
| CAAGTTATTGTTGTGACTGA+TGG | 0.504528 | 3.1:+88352661 | MS.gene014608:CDS |
| AGAGATGCTCATTATGTTCG+TGG | 0.504930 | 3.1:+88352031 | MS.gene014608:CDS |
| TTTCTGATATTTGTGAATGG+AGG | 0.505110 | 3.1:-88355520 | None:intergenic |
| GGGTCTGTATATAAGTTTGA+AGG | 0.508087 | 3.1:+88352504 | MS.gene014608:CDS |
| ACTGTTGGAGTGTAAACAAC+AGG | 0.510690 | 3.1:-88352436 | None:intergenic |
| TGCAACACTAGCAGCAATGT+TGG | 0.511102 | 3.1:-88355551 | None:intergenic |
| CTCAGATTGTGAAGTTGGGT+TGG | 0.511133 | 3.1:-88354785 | None:intergenic |
| GCATTTAGAAGCTCCTTCAC+AGG | 0.511432 | 3.1:-88354454 | None:intergenic |
| ACAGCATCTGTGGTATTAGC+AGG | 0.511802 | 3.1:+88353579 | MS.gene014608:CDS |
| GCTTCCCTTAAATTAGTTGG+AGG | 0.512303 | 3.1:+88353609 | MS.gene014608:CDS |
| TTGATTGGATCATCTGGAGT+AGG | 0.520374 | 3.1:+88354602 | MS.gene014608:CDS |
| TATTGAATTAAAACCTGTCC+AGG | 0.521440 | 3.1:-88354997 | None:intergenic |
| AGGGCATGGGAATTCCTGTT+GGG | 0.523574 | 3.1:+88352852 | MS.gene014608:intron |
| ATGCAGTTAAGCAGAACTAT+GGG | 0.523707 | 3.1:+88353275 | MS.gene014608:CDS |
| AGCTCTTGAGTGAAGACAGC+AGG | 0.526320 | 3.1:-88352064 | None:intergenic |
| TGGGGAGAAAGTTCTTGTAC+AGG | 0.528324 | 3.1:+88353294 | MS.gene014608:CDS |
| CTTATTCTTAGGAGCTGGAG+AGG | 0.528375 | 3.1:+88353653 | MS.gene014608:CDS |
| CATGGAATTTCTCTGTTGCT+AGG | 0.532825 | 3.1:+88351446 | MS.gene014608:CDS |
| TTTACAAGATCCTTTGGTCG+AGG | 0.533764 | 3.1:-88355699 | None:intergenic |
| CAAGGAGGTTGTTGAAGCCA+TGG | 0.536270 | 3.1:+88354637 | MS.gene014608:CDS |
| CAGCAGAAGAAGCTTATACA+TGG | 0.536860 | 3.1:+88354812 | MS.gene014608:CDS |
| TAGGGCATGGGAATTCCTGT+TGG | 0.538702 | 3.1:+88352851 | MS.gene014608:intron |
| CTGAATGATGAATTCTACAT+TGG | 0.540227 | 3.1:+88353076 | MS.gene014608:CDS |
| TCCAGATGATCCAATCAAAA+CGG | 0.543485 | 3.1:-88354597 | None:intergenic |
| AACGGTAGCTTCGATAGCCT+GGG | 0.544790 | 3.1:-88355746 | None:intergenic |
| ATCAAACCCAAACCAAATCC+GGG | 0.548446 | 3.1:-88355134 | None:intergenic |
| TGTGAAGAGGAACATCATAC+TGG | 0.551543 | 3.1:-88352238 | None:intergenic |
| CGTGCGTGATGAGATGCTCT+TGG | 0.552173 | 3.1:+88355175 | MS.gene014608:CDS |
| TTTGGCTGCACAAGTATCGC+AGG | 0.554810 | 3.1:+88355471 | MS.gene014608:CDS |
| TTCTCATTTACCTCGACCAA+AGG | 0.555074 | 3.1:+88355689 | MS.gene014608:CDS |
| GTTGTTTACACTCCAACAGT+TGG | 0.556691 | 3.1:+88352439 | MS.gene014608:CDS |
| GCAGCTAAGACATACGAACT+TGG | 0.559765 | 3.1:+88355571 | MS.gene014608:CDS |
| GGTGAGCGAATATTGGGACT+AGG | 0.569263 | 3.1:+88352682 | MS.gene014608:CDS |
| GATCTGGCTTGTGGACTCCA+AGG | 0.572426 | 3.1:+88354114 | MS.gene014608:CDS |
| ATTTACAGGAGAGGAATGAA+AGG | 0.576916 | 3.1:+88352371 | MS.gene014608:intron |
| GGTTCATGCTCATGGGCCCA+AGG | 0.579706 | 3.1:-88354433 | None:intergenic |
| TACCTCATTCAAGGATGCCA+TGG | 0.579790 | 3.1:-88354654 | None:intergenic |
| CCATGAGCATGAACCTGTGA+AGG | 0.581900 | 3.1:+88354441 | MS.gene014608:CDS |
| GAAAGTTGCATGTACAGCCC+AGG | 0.582833 | 3.1:+88355729 | MS.gene014608:CDS |
| GCAAGTCCTTTGTTGTAGCG+TGG | 0.583550 | 3.1:-88351992 | None:intergenic |
| GATGATCCAATCAAAACGGT+TGG | 0.584702 | 3.1:-88354593 | None:intergenic |
| AGAGATCCACGCTACAACAA+AGG | 0.591569 | 3.1:+88351986 | MS.gene014608:CDS |
| AATTCAGGGTACAGCATCTG+TGG | 0.592279 | 3.1:+88353569 | MS.gene014608:intron |
| TAGCTTAGACATGGCAACTG+AGG | 0.593293 | 3.1:+88351345 | None:intergenic |
| AATGCTATGTACTTGTGAAG+AGG | 0.595015 | 3.1:-88352251 | None:intergenic |
| CTCCTAAGAATAAGAATGTG+TGG | 0.596180 | 3.1:-88353644 | None:intergenic |
| TCTCTCTATACTGCATTAGG+AGG | 0.598664 | 3.1:+88352881 | MS.gene014608:CDS |
| GGAGCTTCTAAATGCTGTCA+AGG | 0.601373 | 3.1:+88354462 | MS.gene014608:CDS |
| TATTGTGGTTTAGGAATATG+CGG | 0.601391 | 3.1:+88353231 | MS.gene014608:intron |
| AGCATTTATAGGCGTCCTCA+GGG | 0.601908 | 3.1:+88352484 | MS.gene014608:CDS |
| TTGCCTATAACCATTGATGT+TGG | 0.615107 | 3.1:+88353034 | MS.gene014608:CDS |
| TGTTAAGGACCTTTATGGTG+AGG | 0.622545 | 3.1:+88351393 | MS.gene014608:CDS |
| CTAGCAACAGAGAAATTCCA+TGG | 0.627315 | 3.1:-88351445 | None:intergenic |
| AGCCATGGCATCCTTGAATG+AGG | 0.632620 | 3.1:+88354652 | MS.gene014608:CDS |
| AGAAGCTTATACATGGAGCA+AGG | 0.633567 | 3.1:+88354819 | MS.gene014608:CDS |
| TTTCAGAGGCAAAATCCTTG+AGG | 0.635790 | 3.1:+88352609 | MS.gene014608:intron |
| TCTTGAGTGAAGACAGCAGG+AGG | 0.639397 | 3.1:-88352061 | None:intergenic |
| TTGGAAAGTGCAAGAATGAG+TGG | 0.647457 | 3.1:-88354766 | None:intergenic |
| ACAGAAGCGAGCAACTGGGA+AGG | 0.653659 | 3.1:+88353105 | MS.gene014608:CDS |
| TGGTGAGGATAGTGCTACAG+AGG | 0.659781 | 3.1:+88351408 | MS.gene014608:CDS |
| AGGATCAACTTATCACACCA+TGG | 0.678592 | 3.1:+88351428 | MS.gene014608:CDS |
| AGGAAAGACATTTACCAAGG+AGG | 0.680892 | 3.1:+88354622 | MS.gene014608:CDS |
| AGAGCATCTCATCACGCACG+CGG | 0.683022 | 3.1:-88355172 | None:intergenic |
| TTAGACAGAAGCGAGCAACT+GGG | 0.694021 | 3.1:+88353101 | MS.gene014608:CDS |
| TGCAGTTAAGCAGAACTATG+GGG | 0.709877 | 3.1:+88353276 | MS.gene014608:CDS |
| AGTAGGAAAGACATTTACCA+AGG | 0.712377 | 3.1:+88354619 | MS.gene014608:CDS |
| AATTTCCTTCATATTCAACG+GGG | 0.737882 | 3.1:-88354966 | None:intergenic |
| AAACTTATATACAGACCCTG+AGG | 0.760636 | 3.1:-88352499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTTATTTACATTCT+TGG | + | chr3.1:88352160-88352179 | MS.gene014608:intron | 10.0% |
| !! | ATATTTGATCAATTAATAAA+TGG | + | chr3.1:88352982-88353001 | MS.gene014608:intron | 10.0% |
| !! | TCATTAAATTATACATAATT+TGG | - | chr3.1:88351813-88351832 | None:intergenic | 10.0% |
| !!! | CTGTTTTAAATAAAATAAAA+TGG | - | chr3.1:88355444-88355463 | None:intergenic | 10.0% |
| !!! | TAAATTAAATACTATCTTTT+TGG | + | chr3.1:88354055-88354074 | MS.gene014608:intron | 10.0% |
| !! | AAAAAAGGAATTATAAAATC+AGG | - | chr3.1:88353376-88353395 | None:intergenic | 15.0% |
| !! | AGATAATCAAGTTAATATAA+AGG | - | chr3.1:88352818-88352837 | None:intergenic | 15.0% |
| !! | GTTATTATTATGTTACATTA+TGG | - | chr3.1:88352128-88352147 | None:intergenic | 15.0% |
| !! | TTAATAAATGGTTTACTATT+TGG | + | chr3.1:88352994-88353013 | MS.gene014608:intron | 15.0% |
| !! | TTATTAATTGATCAAATATG+TGG | - | chr3.1:88352981-88353000 | None:intergenic | 15.0% |
| !!! | TATCTTCAATAATTTTGTTA+GGG | + | chr3.1:88352833-88352852 | MS.gene014608:intron | 15.0% |
| !!! | TTATCTTCAATAATTTTGTT+AGG | + | chr3.1:88352832-88352851 | MS.gene014608:intron | 15.0% |
| !!! | TTTAATGAAAGCATTAATTT+TGG | + | chr3.1:88351825-88351844 | MS.gene014608:intron | 15.0% |
| !! | AAAATAAGAGTCAATAACAT+GGG | - | chr3.1:88353540-88353559 | None:intergenic | 20.0% |
| !! | AAAATCTTCAAACTGAAAAA+AGG | - | chr3.1:88353391-88353410 | None:intergenic | 20.0% |
| !! | AAAATTTCCTTCATATTCAA+CGG | - | chr3.1:88354971-88354990 | None:intergenic | 20.0% |
| !! | AGTCGTTAATTATTATTTCA+TGG | + | chr3.1:88351909-88351928 | MS.gene014608:intron | 20.0% |
| !! | AGTTAATATAAAGGTTTAAC+TGG | - | chr3.1:88352809-88352828 | None:intergenic | 20.0% |
| !! | ATAAGTTTAATGACAAAAGA+GGG | + | chr3.1:88351734-88351753 | MS.gene014608:intron | 20.0% |
| !! | ATAATATTCGACATCATTAT+CGG | - | chr3.1:88351767-88351786 | None:intergenic | 20.0% |
| !! | TATAAGTTTAATGACAAAAG+AGG | + | chr3.1:88351733-88351752 | MS.gene014608:intron | 20.0% |
| !! | TTATCAAATTATTACTAGTG+TGG | - | chr3.1:88353801-88353820 | None:intergenic | 20.0% |
| !!! | AAAAATATGGAAGCATTTAT+AGG | + | chr3.1:88352473-88352492 | MS.gene014608:CDS | 20.0% |
| !!! | AATTTCTTACTACTATCTTT+TGG | + | chr3.1:88353918-88353937 | MS.gene014608:intron | 20.0% |
| !!! | ATTTTCTTTGGTTTAATTCA+GGG | + | chr3.1:88353555-88353574 | MS.gene014608:intron | 20.0% |
| !!! | CTTTGACATTTTTTATTTAC+AGG | + | chr3.1:88352357-88352376 | MS.gene014608:intron | 20.0% |
| !!! | TATTTTCTTTGGTTTAATTC+AGG | + | chr3.1:88353554-88353573 | MS.gene014608:intron | 20.0% |
| !!! | TTAATTTTGTTACAGTATCA+AGG | + | chr3.1:88355259-88355278 | MS.gene014608:intron | 20.0% |
| !!! | TTATTGACTCTTATTTTCTT+TGG | + | chr3.1:88353543-88353562 | MS.gene014608:intron | 20.0% |
| ! | AAACAGAGAAGACAAAATTA+AGG | - | chr3.1:88355653-88355672 | None:intergenic | 25.0% |
| ! | AAATTTCCTTCATATTCAAC+GGG | - | chr3.1:88354970-88354989 | None:intergenic | 25.0% |
| ! | AACAACTTACGAACTAATTA+TGG | + | chr3.1:88351525-88351544 | MS.gene014608:intron | 25.0% |
| ! | AACATAGTGTTTGTTTATTG+TGG | + | chr3.1:88353216-88353235 | MS.gene014608:intron | 25.0% |
| ! | ATCTTTCTGATATTTGTGAA+TGG | - | chr3.1:88355526-88355545 | None:intergenic | 25.0% |
| ! | ATGGAATCAATTGTGAAATA+TGG | - | chr3.1:88354561-88354580 | None:intergenic | 25.0% |
| ! | CTAAGCTAACAAACAAAATA+GGG | - | chr3.1:88352555-88352574 | None:intergenic | 25.0% |
| ! | GAAAATAAGAGTCAATAACA+TGG | - | chr3.1:88353541-88353560 | None:intergenic | 25.0% |
| ! | GCAAATATCTTATGAGATTA+TGG | - | chr3.1:88354355-88354374 | None:intergenic | 25.0% |
| ! | GTAATTAAATCATCATACCA+TGG | + | chr3.1:88352721-88352740 | MS.gene014608:intron | 25.0% |
| ! | TAATATTCGACATCATTATC+GGG | - | chr3.1:88351766-88351785 | None:intergenic | 25.0% |
| ! | TAATGATGTCGAATATTATC+TGG | + | chr3.1:88351768-88351787 | MS.gene014608:intron | 25.0% |
| ! | TAATTGATCAAATATGTGGA+AGG | - | chr3.1:88352977-88352996 | None:intergenic | 25.0% |
| ! | TCTAGTATTACAATTCTAGA+TGG | + | chr3.1:88354154-88354173 | MS.gene014608:intron | 25.0% |
| ! | TGAATTGAACACATTTAACA+TGG | - | chr3.1:88355604-88355623 | None:intergenic | 25.0% |
| ! | TTGAATGTAACTACATATCT+TGG | + | chr3.1:88353831-88353850 | MS.gene014608:intron | 25.0% |
| !! | AAATCATGAATTTTCTTCTC+AGG | - | chr3.1:88351858-88351877 | None:intergenic | 25.0% |
| !! | ATAACTTGAATAGTCTTTTC+TGG | - | chr3.1:88352649-88352668 | None:intergenic | 25.0% |
| !! | TGTTTTCAATGATGATATAC+AGG | + | chr3.1:88353461-88353480 | MS.gene014608:CDS | 25.0% |
| !! | TTAAAGTCAGTCACTAATTT+TGG | - | chr3.1:88355065-88355084 | None:intergenic | 25.0% |
| !! | TTAATTTTGTCTTCTCTGTT+TGG | + | chr3.1:88355652-88355671 | MS.gene014608:intron | 25.0% |
| !!! | AAAGCATTAATTTTGGCTAA+TGG | + | chr3.1:88351832-88351851 | MS.gene014608:intron | 25.0% |
| !!! | AAGTACTTGAATTTTTTCAG+AGG | + | chr3.1:88352595-88352614 | MS.gene014608:intron | 25.0% |
| !!! | ACATTTTTTATTTACAGGAG+AGG | + | chr3.1:88352362-88352381 | MS.gene014608:intron | 25.0% |
| !!! | TAACTAAATTAGTCTTCCTT+AGG | - | chr3.1:88353685-88353704 | None:intergenic | 25.0% |
| AAACATCATGGTGCAAAAAA+AGG | - | chr3.1:88353177-88353196 | None:intergenic | 30.0% | |
| AAGATATTTGCTCTATTGCA+GGG | + | chr3.1:88354364-88354383 | MS.gene014608:intron | 30.0% | |
| AAGCATAAATGCAAAAAGTG+AGG | - | chr3.1:88353720-88353739 | None:intergenic | 30.0% | |
| AAGTTCCTCCAACTAATTTA+AGG | - | chr3.1:88353617-88353636 | None:intergenic | 30.0% | |
| AATTTCCTTCATATTCAACG+GGG | - | chr3.1:88354969-88354988 | None:intergenic | 30.0% | |
| ACCACAATAAACAAACATCA+TGG | - | chr3.1:88353189-88353208 | None:intergenic | 30.0% | |
| ACCATGATGTTTGTTTATTG+TGG | + | chr3.1:88353185-88353204 | MS.gene014608:intron | 30.0% | |
| AGTTCCTCCAACTAATTTAA+GGG | - | chr3.1:88353616-88353635 | None:intergenic | 30.0% | |
| ATCGTCAAAACAAACAAACA+GGG | - | chr3.1:88351619-88351638 | None:intergenic | 30.0% | |
| CAATGTAATGTGACGTAATT+AGG | - | chr3.1:88351488-88351507 | None:intergenic | 30.0% | |
| CCTTTATATCCAAGAAAACA+CGG | + | chr3.1:88352777-88352796 | MS.gene014608:intron | 30.0% | |
| CTAATGTTTGTGACATTTCT+TGG | + | chr3.1:88354728-88354747 | MS.gene014608:intron | 30.0% | |
| CTGAATGATGAATTCTACAT+TGG | + | chr3.1:88353076-88353095 | MS.gene014608:CDS | 30.0% | |
| GCTAAGCTAACAAACAAAAT+AGG | - | chr3.1:88352556-88352575 | None:intergenic | 30.0% | |
| GGTATGATGATTTAATTACC+TGG | - | chr3.1:88352720-88352739 | None:intergenic | 30.0% | |
| GTGTTTGTTTATTGTGGTTT+AGG | + | chr3.1:88353222-88353241 | MS.gene014608:intron | 30.0% | |
| TAAGATATTTGCTCTATTGC+AGG | + | chr3.1:88354363-88354382 | MS.gene014608:intron | 30.0% | |
| TAATAATGACTGTGTTACAG+TGG | + | chr3.1:88351950-88351969 | MS.gene014608:intron | 30.0% | |
| TAATTCCGATCAAAGATGAA+GGG | + | chr3.1:88354313-88354332 | MS.gene014608:intron | 30.0% | |
| TATTGAATTAAAACCTGTCC+AGG | - | chr3.1:88355000-88355019 | None:intergenic | 30.0% | |
| TATTGTGGTTTAGGAATATG+CGG | + | chr3.1:88353231-88353250 | MS.gene014608:intron | 30.0% | |
| TCAATGATGATATACAGGTA+AGG | + | chr3.1:88353466-88353485 | MS.gene014608:intron | 30.0% | |
| TCTTTGTACAATGTGCAATT+TGG | + | chr3.1:88351586-88351605 | MS.gene014608:intron | 30.0% | |
| TGAACAATTCATCTGTTTCA+TGG | + | chr3.1:88351678-88351697 | MS.gene014608:intron | 30.0% | |
| TTCTGATATTTGTGAATGGA+GGG | - | chr3.1:88355522-88355541 | None:intergenic | 30.0% | |
| TTTCTGATATTTGTGAATGG+AGG | - | chr3.1:88355523-88355542 | None:intergenic | 30.0% | |
| ! | AACAATGCTTACATTTTTCC+CGG | + | chr3.1:88355116-88355135 | MS.gene014608:CDS | 30.0% |
| ! | ATGATTTTCGTGCATCATTA+TGG | + | chr3.1:88351871-88351890 | MS.gene014608:intron | 30.0% |
| ! | ATTTAAAACAGCTGAAGCTT+TGG | + | chr3.1:88355453-88355472 | MS.gene014608:intron | 30.0% |
| ! | ATTTCACAATTGATTCCATC+AGG | + | chr3.1:88354562-88354581 | MS.gene014608:intron | 30.0% |
| ! | ATTTTGTCTCTTCTATTTGC+AGG | + | chr3.1:88354909-88354928 | MS.gene014608:intron | 30.0% |
| ! | CAATAATTTTGTTAGGGCAT+GGG | + | chr3.1:88352839-88352858 | MS.gene014608:intron | 30.0% |
| ! | TCAATAATTTTGTTAGGGCA+TGG | + | chr3.1:88352838-88352857 | MS.gene014608:intron | 30.0% |
| ! | TCTTAGTTCTTACTGAAGAA+GGG | - | chr3.1:88352913-88352932 | None:intergenic | 30.0% |
| ! | TTCTTAGTTCTTACTGAAGA+AGG | - | chr3.1:88352914-88352933 | None:intergenic | 30.0% |
| ! | TTTTGTCTCTTCTATTTGCA+GGG | + | chr3.1:88354910-88354929 | MS.gene014608:intron | 30.0% |
| !! | AAGATCGAAAGCATTATGAT+TGG | - | chr3.1:88353415-88353434 | None:intergenic | 30.0% |
| !! | AATGCTTCCATATTTTTGAC+AGG | - | chr3.1:88352470-88352489 | None:intergenic | 30.0% |
| !! | TACTATCTTTTGGCTATTGA+AGG | + | chr3.1:88353928-88353947 | MS.gene014608:intron | 30.0% |
| !! | TTATGTGTTTTCAGGAAAAG+AGG | + | chr3.1:88352198-88352217 | MS.gene014608:intron | 30.0% |
| !!! | AAATTTTTTTGTTCCTGGAC+AGG | + | chr3.1:88354984-88355003 | MS.gene014608:CDS | 30.0% |
| !!! | ATCTCTGTAGTTTTAAACCA+TGG | - | chr3.1:88352741-88352760 | None:intergenic | 30.0% |
| !!! | GAAGGAAATTTTTTTGTTCC+TGG | + | chr3.1:88354979-88354998 | MS.gene014608:CDS | 30.0% |
| AAACTTATATACAGACCCTG+AGG | - | chr3.1:88352502-88352521 | None:intergenic | 35.0% | |
| AATGCTATGTACTTGTGAAG+AGG | - | chr3.1:88352254-88352273 | None:intergenic | 35.0% | |
| ACACATAACAACAACGAAGT+TGG | - | chr3.1:88352186-88352205 | None:intergenic | 35.0% | |
| ACATTCTTATTCTTAGGAGC+TGG | + | chr3.1:88353648-88353667 | MS.gene014608:CDS | 35.0% | |
| AGCTCTTGAGATTTCAAAAC+AGG | + | chr3.1:88353976-88353995 | MS.gene014608:CDS | 35.0% | |
| AGTAGGAAAGACATTTACCA+AGG | + | chr3.1:88354619-88354638 | MS.gene014608:CDS | 35.0% | |
| ATCTCTTTCTTTCTCAGTGA+AGG | - | chr3.1:88352017-88352036 | None:intergenic | 35.0% | |
| ATGCAGTTAAGCAGAACTAT+GGG | + | chr3.1:88353275-88353294 | MS.gene014608:CDS | 35.0% | |
| ATGTCAAAGACAGTGAGAAA+AGG | - | chr3.1:88352346-88352365 | None:intergenic | 35.0% | |
| ATTGTTTGTGCCAACATCAA+TGG | - | chr3.1:88353047-88353066 | None:intergenic | 35.0% | |
| ATTTACAGGAGAGGAATGAA+AGG | + | chr3.1:88352371-88352390 | MS.gene014608:intron | 35.0% | |
| CAAGTTATTGTTGTGACTGA+TGG | + | chr3.1:88352661-88352680 | MS.gene014608:CDS | 35.0% | |
| CTCCTAAGAATAAGAATGTG+TGG | - | chr3.1:88353647-88353666 | None:intergenic | 35.0% | |
| CTTGCTTCCCTTAAATTAGT+TGG | + | chr3.1:88353606-88353625 | MS.gene014608:CDS | 35.0% | |
| CTTTCTCTCTATACTGCATT+AGG | + | chr3.1:88352878-88352897 | MS.gene014608:CDS | 35.0% | |
| GACCACACATTCTTATTCTT+AGG | + | chr3.1:88353642-88353661 | MS.gene014608:CDS | 35.0% | |
| GATCGTCAAAACAAACAAAC+AGG | - | chr3.1:88351620-88351639 | None:intergenic | 35.0% | |
| GGGTCTGTATATAAGTTTGA+AGG | + | chr3.1:88352504-88352523 | MS.gene014608:CDS | 35.0% | |
| GTAATTCCGATCAAAGATGA+AGG | + | chr3.1:88354312-88354331 | MS.gene014608:intron | 35.0% | |
| GTATGAATGTACCTCATTCA+AGG | - | chr3.1:88354666-88354685 | None:intergenic | 35.0% | |
| TAACTACATATCTTGGACAC+TGG | + | chr3.1:88353838-88353857 | MS.gene014608:intron | 35.0% | |
| TCAACACTTCAAAAAGCCTT+GGG | + | chr3.1:88354417-88354436 | MS.gene014608:CDS | 35.0% | |
| TCATAATGCTTTCGATCTTC+TGG | + | chr3.1:88353416-88353435 | MS.gene014608:CDS | 35.0% | |
| TCCAGATGATCCAATCAAAA+CGG | - | chr3.1:88354600-88354619 | None:intergenic | 35.0% | |
| TCTCAATTGCATGTACTTAC+AGG | - | chr3.1:88355204-88355223 | None:intergenic | 35.0% | |
| TGGATGTGTTAGTATCAGTA+TGG | - | chr3.1:88353781-88353800 | None:intergenic | 35.0% | |
| TTCAACACTTCAAAAAGCCT+TGG | + | chr3.1:88354416-88354435 | MS.gene014608:CDS | 35.0% | |
| TTCAACATCTTCAGTGTCTT+TGG | + | chr3.1:88353329-88353348 | MS.gene014608:intron | 35.0% | |
| TTGCCTATAACCATTGATGT+TGG | + | chr3.1:88353034-88353053 | MS.gene014608:CDS | 35.0% | |
| ! | AGTTGTGTGTTGTTAAGACA+TGG | + | chr3.1:88355400-88355419 | MS.gene014608:intron | 35.0% |
| ! | CAGTTCAAGCATTTTTACCT+TGG | - | chr3.1:88354134-88354153 | None:intergenic | 35.0% |
| ! | CCGTGTTTTCTTGGATATAA+AGG | - | chr3.1:88352780-88352799 | None:intergenic | 35.0% |
| ! | GCGTATTTTACAAGATCCTT+TGG | - | chr3.1:88355708-88355727 | None:intergenic | 35.0% |
| ! | GGGAAAAATGTAAGCATTGT+TGG | - | chr3.1:88355117-88355136 | None:intergenic | 35.0% |
| ! | GTTTTGCTGCAATGCAATTT+AGG | + | chr3.1:88355091-88355110 | MS.gene014608:intron | 35.0% |
| ! | TCACAAGTACATAGCATTGA+TGG | + | chr3.1:88352256-88352275 | MS.gene014608:CDS | 35.0% |
| !! | ATTTTTCCCGGATTTGGTTT+GGG | + | chr3.1:88355128-88355147 | MS.gene014608:CDS | 35.0% |
| !! | CGTTGTTGTTATGTGTTTTC+AGG | + | chr3.1:88352190-88352209 | MS.gene014608:intron | 35.0% |
| !!! | AAGGCTTTTTGAAGTGTTGA+AGG | - | chr3.1:88354417-88354436 | None:intergenic | 35.0% |
| !!! | AGGCTTTTTGAAGTGTTGAA+GGG | - | chr3.1:88354416-88354435 | None:intergenic | 35.0% |
| AAGAGACTCGCAAAAAGATC+TGG | + | chr3.1:88354098-88354117 | MS.gene014608:CDS | 40.0% | |
| ACAATTCTAGATGGAAGTCG+TGG | + | chr3.1:88354163-88354182 | MS.gene014608:intron | 40.0% | |
| ACTGTTGGAGTGTAAACAAC+AGG | - | chr3.1:88352439-88352458 | None:intergenic | 40.0% | |
| AGAAGCTTATACATGGAGCA+AGG | + | chr3.1:88354819-88354838 | MS.gene014608:CDS | 40.0% | |
| AGAGATGCTCATTATGTTCG+TGG | + | chr3.1:88352031-88352050 | MS.gene014608:CDS | 40.0% | |
| AGGAAAGACATTTACCAAGG+AGG | + | chr3.1:88354622-88354641 | MS.gene014608:CDS | 40.0% | |
| AGGATCAACTTATCACACCA+TGG | + | chr3.1:88351428-88351447 | MS.gene014608:CDS | 40.0% | |
| ATCAAACCCAAACCAAATCC+GGG | - | chr3.1:88355137-88355156 | None:intergenic | 40.0% | |
| ATCAAATATGTGGAAGGCGA+AGG | - | chr3.1:88352971-88352990 | None:intergenic | 40.0% | |
| ATCGCAGGAGAACTATGATA+AGG | + | chr3.1:88355486-88355505 | MS.gene014608:CDS | 40.0% | |
| CAGCAGAAGAAGCTTATACA+TGG | + | chr3.1:88354812-88354831 | MS.gene014608:CDS | 40.0% | |
| CATATTCAACGGGGTCAAAT+GGG | - | chr3.1:88354960-88354979 | None:intergenic | 40.0% | |
| CATGCAGTTAAGCAGAACTA+TGG | + | chr3.1:88353274-88353293 | MS.gene014608:CDS | 40.0% | |
| CATGGAATTTCTCTGTTGCT+AGG | + | chr3.1:88351446-88351465 | MS.gene014608:CDS | 40.0% | |
| CTAGCAACAGAGAAATTCCA+TGG | - | chr3.1:88351448-88351467 | None:intergenic | 40.0% | |
| GATCAAACCCAAACCAAATC+CGG | - | chr3.1:88355138-88355157 | None:intergenic | 40.0% | |
| GATGATCCAATCAAAACGGT+TGG | - | chr3.1:88354596-88354615 | None:intergenic | 40.0% | |
| GCTTCCCTTAAATTAGTTGG+AGG | + | chr3.1:88353609-88353628 | MS.gene014608:CDS | 40.0% | |
| GGAGAAGCCTGTCAAAAATA+TGG | + | chr3.1:88352460-88352479 | MS.gene014608:CDS | 40.0% | |
| GTGCCAACATCAATGGTTAT+AGG | - | chr3.1:88353040-88353059 | None:intergenic | 40.0% | |
| GTTAGTATCAGTATGGTGTC+CGG | - | chr3.1:88353774-88353793 | None:intergenic | 40.0% | |
| GTTGTTTACACTCCAACAGT+TGG | + | chr3.1:88352439-88352458 | MS.gene014608:CDS | 40.0% | |
| TAGAGAGAAAGTTTCCCAAC+AGG | - | chr3.1:88352869-88352888 | None:intergenic | 40.0% | |
| TAGCACTATCCTCACCATAA+AGG | - | chr3.1:88351405-88351424 | None:intergenic | 40.0% | |
| TCATATTCAACGGGGTCAAA+TGG | - | chr3.1:88354961-88354980 | None:intergenic | 40.0% | |
| TCGACATCATTATCGGGATT+CGG | - | chr3.1:88351760-88351779 | None:intergenic | 40.0% | |
| TCGCAGGAGAACTATGATAA+GGG | + | chr3.1:88355487-88355506 | MS.gene014608:CDS | 40.0% | |
| TCTCTCTATACTGCATTAGG+AGG | + | chr3.1:88352881-88352900 | MS.gene014608:CDS | 40.0% | |
| TGCACTCAGATTGTGAAGTT+GGG | - | chr3.1:88354792-88354811 | None:intergenic | 40.0% | |
| TGCAGTTAAGCAGAACTATG+GGG | + | chr3.1:88353276-88353295 | MS.gene014608:CDS | 40.0% | |
| TGTGAAGAGGAACATCATAC+TGG | - | chr3.1:88352241-88352260 | None:intergenic | 40.0% | |
| TGTTAAGGACCTTTATGGTG+AGG | + | chr3.1:88351393-88351412 | MS.gene014608:CDS | 40.0% | |
| TTCTCATTTACCTCGACCAA+AGG | + | chr3.1:88355689-88355708 | MS.gene014608:CDS | 40.0% | |
| TTGTGCCCTTCATCTTTGAT+CGG | - | chr3.1:88354321-88354340 | None:intergenic | 40.0% | |
| TTTACAAGATCCTTTGGTCG+AGG | - | chr3.1:88355702-88355721 | None:intergenic | 40.0% | |
| TTTCAGAGGCAAAATCCTTG+AGG | + | chr3.1:88352609-88352628 | MS.gene014608:intron | 40.0% | |
| TTTGACCCCGTTGAATATGA+AGG | + | chr3.1:88354961-88354980 | MS.gene014608:CDS | 40.0% | |
| ! | ACTGATGGTGAGCGAATATT+GGG | + | chr3.1:88352676-88352695 | MS.gene014608:CDS | 40.0% |
| ! | GAGGATTTTGTGAATGGTGT+TGG | + | chr3.1:88351364-88351383 | MS.gene014608:CDS | 40.0% |
| ! | GCAACTGAGGATTTTGTGAA+TGG | + | chr3.1:88351358-88351377 | MS.gene014608:CDS | 40.0% |
| ! | GCTTACATTTTTCCCGGATT+TGG | + | chr3.1:88355122-88355141 | MS.gene014608:CDS | 40.0% |
| ! | GGTAAAGCAATTTTCGCTAG+TGG | + | chr3.1:88354931-88354950 | MS.gene014608:CDS | 40.0% |
| ! | TCCTTGAGGTGCTTAAAAAC+TGG | + | chr3.1:88352623-88352642 | MS.gene014608:CDS | 40.0% |
| ! | TGGATTTTGCCGTGTTTTCT+TGG | - | chr3.1:88352789-88352808 | None:intergenic | 40.0% |
| ! | TTGATTGGATCATCTGGAGT+AGG | + | chr3.1:88354602-88354621 | MS.gene014608:CDS | 40.0% |
| ! | TTGGAAAGTGCAAGAATGAG+TGG | - | chr3.1:88354769-88354788 | None:intergenic | 40.0% |
| ! | TTTTTGCGAGTCTCTTCAAC+CGG | - | chr3.1:88354094-88354113 | None:intergenic | 40.0% |
| !! | ATCAAGCCAACCGTTTTGAT+TGG | + | chr3.1:88354587-88354606 | MS.gene014608:CDS | 40.0% |
| !! | ATCTTTTGGCTATTGAAGGC+TGG | + | chr3.1:88353932-88353951 | MS.gene014608:intron | 40.0% |
| !! | CATAGCATTGATGGATCTTC+AGG | + | chr3.1:88352265-88352284 | MS.gene014608:CDS | 40.0% |
| !! | CATTTTTCCCGGATTTGGTT+TGG | + | chr3.1:88355127-88355146 | MS.gene014608:CDS | 40.0% |
| !! | GATTTTGTGAATGGTGTTGG+TGG | + | chr3.1:88351367-88351386 | MS.gene014608:CDS | 40.0% |
| !! | TTTTGGCTAGACAAAAGCTC+CGG | + | chr3.1:88354072-88354091 | MS.gene014608:intron | 40.0% |
| !!! | ACCGTTTTGATTGGATCATC+TGG | + | chr3.1:88354596-88354615 | MS.gene014608:CDS | 40.0% |
| AACACAGACACATACACCAC+CGG | + | chr3.1:88353752-88353771 | MS.gene014608:intron | 45.0% | |
| AAGCATTTATAGGCGTCCTC+AGG | + | chr3.1:88352483-88352502 | MS.gene014608:CDS | 45.0% | |
| AATTCAGGGTACAGCATCTG+TGG | + | chr3.1:88353569-88353588 | MS.gene014608:intron | 45.0% | |
| ACAGCATCTGTGGTATTAGC+AGG | + | chr3.1:88353579-88353598 | MS.gene014608:CDS | 45.0% | |
| AGAGATCCACGCTACAACAA+AGG | + | chr3.1:88351986-88352005 | MS.gene014608:CDS | 45.0% | |
| AGCATTTATAGGCGTCCTCA+GGG | + | chr3.1:88352484-88352503 | MS.gene014608:CDS | 45.0% | |
| ATATTGGGACTAGGCGATCT+TGG | + | chr3.1:88352691-88352710 | MS.gene014608:CDS | 45.0% | |
| CTCAGATTGTGAAGTTGGGT+TGG | - | chr3.1:88354788-88354807 | None:intergenic | 45.0% | |
| CTTATTCTTAGGAGCTGGAG+AGG | + | chr3.1:88353653-88353672 | MS.gene014608:CDS | 45.0% | |
| CTTCACAGGTTCATGCTCAT+GGG | - | chr3.1:88354443-88354462 | None:intergenic | 45.0% | |
| GCAGCTAAGACATACGAACT+TGG | + | chr3.1:88355571-88355590 | MS.gene014608:CDS | 45.0% | |
| GCATTTAGAAGCTCCTTCAC+AGG | - | chr3.1:88354457-88354476 | None:intergenic | 45.0% | |
| GGAGCTTCTAAATGCTGTCA+AGG | + | chr3.1:88354462-88354481 | MS.gene014608:CDS | 45.0% | |
| GTGCACTCAGATTGTGAAGT+TGG | - | chr3.1:88354793-88354812 | None:intergenic | 45.0% | |
| TACCTCATTCAAGGATGCCA+TGG | - | chr3.1:88354657-88354676 | None:intergenic | 45.0% | |
| TGCAACACTAGCAGCAATGT+TGG | - | chr3.1:88355554-88355573 | None:intergenic | 45.0% | |
| TGGGGAGAAAGTTCTTGTAC+AGG | + | chr3.1:88353294-88353313 | MS.gene014608:CDS | 45.0% | |
| TGTCTTCACTCAAGAGCTTC+AGG | + | chr3.1:88352069-88352088 | MS.gene014608:CDS | 45.0% | |
| TTAGACAGAAGCGAGCAACT+GGG | + | chr3.1:88353101-88353120 | MS.gene014608:CDS | 45.0% | |
| TTGCATGTCAGTGAGTGTGA+AGG | - | chr3.1:88353140-88353159 | None:intergenic | 45.0% | |
| ! | GACTGATGGTGAGCGAATAT+TGG | + | chr3.1:88352675-88352694 | MS.gene014608:CDS | 45.0% |
| ! | GGTGGTGTTAAGGACCTTTA+TGG | + | chr3.1:88351388-88351407 | MS.gene014608:CDS | 45.0% |
| ! | GGTTTGGGTTTGATCATCTC+TGG | + | chr3.1:88355143-88355162 | MS.gene014608:CDS | 45.0% |
| ! | TCGCAAAAAGATCTGGCTTG+TGG | + | chr3.1:88354105-88354124 | MS.gene014608:CDS | 45.0% |
| !! | GCCAGTTTTTAAGCACCTCA+AGG | - | chr3.1:88352627-88352646 | None:intergenic | 45.0% |
| !! | GTCTTCTCTGTTTGGTGTAC+AGG | + | chr3.1:88355660-88355679 | MS.gene014608:intron | 45.0% |
| !! | TTTGTGAATGGTGTTGGTGG+TGG | + | chr3.1:88351370-88351389 | MS.gene014608:CDS | 45.0% |
| AACGGTAGCTTCGATAGCCT+GGG | - | chr3.1:88355749-88355768 | None:intergenic | 50.0% | |
| AGCCATGGCATCCTTGAATG+AGG | + | chr3.1:88354652-88354671 | MS.gene014608:CDS | 50.0% | |
| AGCTCTTGAGTGAAGACAGC+AGG | - | chr3.1:88352067-88352086 | None:intergenic | 50.0% | |
| AGGGCATGGGAATTCCTGTT+GGG | + | chr3.1:88352852-88352871 | MS.gene014608:intron | 50.0% | |
| AGTATCAGTATGGTGTCCGG+TGG | - | chr3.1:88353771-88353790 | None:intergenic | 50.0% | |
| CAAGGAGGTTGTTGAAGCCA+TGG | + | chr3.1:88354637-88354656 | MS.gene014608:CDS | 50.0% | |
| CAGTTGCTCGCTTCTGTCTA+AGG | - | chr3.1:88353102-88353121 | None:intergenic | 50.0% | |
| CATGGCTTCAACAACCTCCT+TGG | - | chr3.1:88354639-88354658 | None:intergenic | 50.0% | |
| CCATGAGCATGAACCTGTGA+AGG | + | chr3.1:88354441-88354460 | MS.gene014608:CDS | 50.0% | |
| CCTTCACAGGTTCATGCTCA+TGG | - | chr3.1:88354444-88354463 | None:intergenic | 50.0% | |
| CTTAGACAGAAGCGAGCAAC+TGG | + | chr3.1:88353100-88353119 | MS.gene014608:CDS | 50.0% | |
| GAAAGTTGCATGTACAGCCC+AGG | + | chr3.1:88355729-88355748 | MS.gene014608:CDS | 50.0% | |
| GCTGGAGAGGTAAGTTCCTA+AGG | + | chr3.1:88353666-88353685 | MS.gene014608:intron | 50.0% | |
| GGTGAGCGAATATTGGGACT+AGG | + | chr3.1:88352682-88352701 | MS.gene014608:CDS | 50.0% | |
| TAGGGCATGGGAATTCCTGT+TGG | + | chr3.1:88352851-88352870 | MS.gene014608:intron | 50.0% | |
| TCTTGAGTGAAGACAGCAGG+AGG | - | chr3.1:88352064-88352083 | None:intergenic | 50.0% | |
| TGAAGACAGCAGGAGGCAAA+AGG | - | chr3.1:88352057-88352076 | None:intergenic | 50.0% | |
| TGACAGGCTTCTCCAACTGT+TGG | - | chr3.1:88352454-88352473 | None:intergenic | 50.0% | |
| TGGCTATTGAAGGCTGGAAC+TGG | + | chr3.1:88353938-88353957 | MS.gene014608:intron | 50.0% | |
| TGGTGAGGATAGTGCTACAG+AGG | + | chr3.1:88351408-88351427 | MS.gene014608:CDS | 50.0% | |
| ! | AGGCGAAGGCATAGGGAAAA+AGG | - | chr3.1:88352957-88352976 | None:intergenic | 50.0% |
| ! | ATGTGGAAGGCGAAGGCATA+GGG | - | chr3.1:88352964-88352983 | None:intergenic | 50.0% |
| ! | GCAAGTCCTTTGTTGTAGCG+TGG | - | chr3.1:88351995-88352014 | None:intergenic | 50.0% |
| ! | TATGTGGAAGGCGAAGGCAT+AGG | - | chr3.1:88352965-88352984 | None:intergenic | 50.0% |
| ! | TTTGGCTGCACAAGTATCGC+AGG | + | chr3.1:88355471-88355490 | MS.gene014608:CDS | 50.0% |
| !! | CTCTGTTTGGTGTACAGGTC+TGG | + | chr3.1:88355665-88355684 | MS.gene014608:intron | 50.0% |
| !! | TGGTGTTGGTGGTGGTGTTA+AGG | + | chr3.1:88351378-88351397 | MS.gene014608:CDS | 50.0% |
| ACAGAAGCGAGCAACTGGGA+AGG | + | chr3.1:88353105-88353124 | MS.gene014608:CDS | 55.0% | |
| ACTAGGCGATCTTGGTTGCC+AGG | + | chr3.1:88352699-88352718 | MS.gene014608:CDS | 55.0% | |
| CAACGGTAGCTTCGATAGCC+TGG | - | chr3.1:88355750-88355769 | None:intergenic | 55.0% | |
| CGTGCGTGATGAGATGCTCT+TGG | + | chr3.1:88355175-88355194 | MS.gene014608:CDS | 55.0% | |
| ! | AGAGCATCTCATCACGCACG+CGG | - | chr3.1:88355175-88355194 | None:intergenic | 55.0% |
| ! | GATCTGGCTTGTGGACTCCA+AGG | + | chr3.1:88354114-88354133 | MS.gene014608:CDS | 55.0% |
| !! | CGGTTGGCTTGATTGCCTGA+TGG | - | chr3.1:88354580-88354599 | None:intergenic | 55.0% |
| GGTTCATGCTCATGGGCCCA+AGG | - | chr3.1:88354436-88354455 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 88351355 | 88355770 | 88351355 | ID=MS.gene014608 |
| chr3.1 | mRNA | 88351355 | 88355770 | 88351355 | ID=MS.gene014608.t1;Parent=MS.gene014608 |
| chr3.1 | exon | 88351355 | 88351467 | 88351355 | ID=MS.gene014608.t1.exon1;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88351355 | 88351467 | 88351355 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88351970 | 88352090 | 88351970 | ID=MS.gene014608.t1.exon2;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88351970 | 88352090 | 88351970 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88352212 | 88352286 | 88352212 | ID=MS.gene014608.t1.exon3;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88352212 | 88352286 | 88352212 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88352379 | 88352530 | 88352379 | ID=MS.gene014608.t1.exon4;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88352379 | 88352530 | 88352379 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88352615 | 88352720 | 88352615 | ID=MS.gene014608.t1.exon5;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88352615 | 88352720 | 88352615 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88352854 | 88352919 | 88352854 | ID=MS.gene014608.t1.exon6;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88352854 | 88352919 | 88352854 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88353031 | 88353126 | 88353031 | ID=MS.gene014608.t1.exon7;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88353031 | 88353126 | 88353031 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88353244 | 88353315 | 88353244 | ID=MS.gene014608.t1.exon8;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88353244 | 88353315 | 88353244 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88353399 | 88353482 | 88353399 | ID=MS.gene014608.t1.exon9;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88353399 | 88353482 | 88353399 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88353576 | 88353674 | 88353576 | ID=MS.gene014608.t1.exon10;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88353576 | 88353674 | 88353576 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88353950 | 88353997 | 88353950 | ID=MS.gene014608.t1.exon11;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88353950 | 88353997 | 88353950 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88354082 | 88354135 | 88354082 | ID=MS.gene014608.t1.exon12;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88354082 | 88354135 | 88354082 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88354385 | 88354483 | 88354385 | ID=MS.gene014608.t1.exon13;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88354385 | 88354483 | 88354385 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88354584 | 88354673 | 88354584 | ID=MS.gene014608.t1.exon14;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88354584 | 88354673 | 88354584 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88354763 | 88354840 | 88354763 | ID=MS.gene014608.t1.exon15;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88354763 | 88354840 | 88354763 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88354931 | 88355005 | 88354931 | ID=MS.gene014608.t1.exon16;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88354931 | 88355005 | 88354931 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88355113 | 88355203 | 88355113 | ID=MS.gene014608.t1.exon17;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88355113 | 88355203 | 88355113 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88355464 | 88355592 | 88355464 | ID=MS.gene014608.t1.exon18;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88355464 | 88355592 | 88355464 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| chr3.1 | exon | 88355682 | 88355770 | 88355682 | ID=MS.gene014608.t1.exon19;Parent=MS.gene014608.t1 |
| chr3.1 | CDS | 88355682 | 88355770 | 88355682 | ID=cds.MS.gene014608.t1;Parent=MS.gene014608.t1 |
| Gene Sequence |
| Protein sequence |
