Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015800.t1 | XP_003630727.1 | 99.8 | 591 | 1 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1175.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015800.t1 | P51615 | 84.6 | 591 | 91 | 0 | 1 | 591 | 1 | 591 | 5.6e-298 | 1024.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015800.t1 | G7L7H0 | 99.8 | 591 | 1 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1175.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049858 | MS.gene015800 | PPI |
| MS.gene39348 | MS.gene015800 | PPI |
| MS.gene015800 | MS.gene020057 | PPI |
| MS.gene055729 | MS.gene015800 | PPI |
| MS.gene65276 | MS.gene015800 | PPI |
| MS.gene019525 | MS.gene015800 | PPI |
| MS.gene023832 | MS.gene015800 | PPI |
| MS.gene015800 | MS.gene27680 | PPI |
| MS.gene27682 | MS.gene015800 | PPI |
| MS.gene08581 | MS.gene015800 | PPI |
| MS.gene27681 | MS.gene015800 | PPI |
| MS.gene52200 | MS.gene015800 | PPI |
| MS.gene015800 | MS.gene022694 | PPI |
| MS.gene58341 | MS.gene015800 | PPI |
| MS.gene015800 | MS.gene055731 | PPI |
| MS.gene39666 | MS.gene015800 | PPI |
| MS.gene004152 | MS.gene015800 | PPI |
| MS.gene015800 | MS.gene055730 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015800.t1 | MTR_8g102620 | 99.831 | 591 | 1 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1216 |
| MS.gene015800.t1 | MTR_3g110330 | 84.764 | 571 | 87 | 0 | 21 | 591 | 8 | 578 | 0.0 | 1013 |
| MS.gene015800.t1 | MTR_2g101040 | 78.511 | 591 | 127 | 0 | 1 | 591 | 85 | 675 | 0.0 | 967 |
| MS.gene015800.t1 | MTR_8g014390 | 78.238 | 579 | 126 | 0 | 13 | 591 | 10 | 588 | 0.0 | 954 |
| MS.gene015800.t1 | MTR_2g101040 | 75.121 | 619 | 126 | 1 | 1 | 591 | 51 | 669 | 0.0 | 953 |
| MS.gene015800.t1 | MTR_2g101040 | 78.657 | 581 | 124 | 0 | 1 | 581 | 51 | 631 | 0.0 | 951 |
| MS.gene015800.t1 | MTR_2g101040 | 78.863 | 563 | 119 | 0 | 1 | 563 | 51 | 613 | 0.0 | 920 |
| MS.gene015800.t1 | MTR_7g076650 | 41.549 | 568 | 297 | 9 | 52 | 587 | 30 | 594 | 4.51e-147 | 437 |
| MS.gene015800.t1 | MTR_8g009500 | 42.032 | 571 | 291 | 10 | 54 | 587 | 53 | 620 | 2.86e-145 | 434 |
| MS.gene015800.t1 | MTR_8g032040 | 40.917 | 567 | 302 | 9 | 52 | 587 | 33 | 597 | 1.29e-144 | 431 |
| MS.gene015800.t1 | MTR_7g076650 | 38.944 | 606 | 297 | 10 | 52 | 587 | 30 | 632 | 9.21e-140 | 420 |
| MS.gene015800.t1 | MTR_7g076650 | 43.177 | 491 | 256 | 7 | 52 | 521 | 30 | 518 | 7.08e-136 | 406 |
| MS.gene015800.t1 | MTR_8g009500 | 42.436 | 509 | 263 | 9 | 106 | 587 | 21 | 526 | 3.44e-131 | 394 |
| MS.gene015800.t1 | MTR_8g009500 | 43.016 | 451 | 230 | 7 | 54 | 479 | 53 | 501 | 3.58e-122 | 370 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015800.t1 | AT5G25880 | 80.210 | 571 | 113 | 0 | 21 | 591 | 18 | 588 | 0.0 | 982 |
| MS.gene015800.t1 | AT1G79750 | 79.102 | 579 | 121 | 0 | 13 | 591 | 68 | 646 | 0.0 | 976 |
| MS.gene015800.t1 | AT2G19900 | 80.862 | 580 | 111 | 0 | 12 | 591 | 2 | 581 | 0.0 | 967 |
| MS.gene015800.t1 | AT5G11670 | 79.518 | 581 | 117 | 1 | 11 | 591 | 10 | 588 | 0.0 | 962 |
| MS.gene015800.t1 | AT5G25880 | 80.479 | 543 | 106 | 0 | 21 | 563 | 18 | 560 | 0.0 | 933 |
| MS.gene015800.t1 | AT2G19900 | 83.195 | 482 | 81 | 0 | 110 | 591 | 1 | 482 | 0.0 | 823 |
| MS.gene015800.t1 | AT5G25880 | 81.081 | 444 | 84 | 0 | 21 | 464 | 18 | 461 | 0.0 | 775 |
| MS.gene015800.t1 | AT2G13560 | 42.657 | 572 | 290 | 10 | 52 | 587 | 46 | 615 | 1.03e-149 | 445 |
| MS.gene015800.t1 | AT4G00570 | 40.459 | 566 | 303 | 9 | 52 | 587 | 39 | 600 | 5.98e-144 | 430 |
Find 149 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGCAGATTCCTCTCATTT+TGG | 0.129337 | 4.3:+2686395 | MS.gene015800:intron |
| TGTATATGCTCCCGTATTTC+TGG | 0.180374 | 4.3:-2684140 | None:intergenic |
| AACTGACGGTGAGCGGATTT+TGG | 0.205691 | 4.3:+2684353 | MS.gene015800:CDS |
| GGGAATTCCTGTTGGTAAAT+TGG | 0.238319 | 4.3:+2684757 | MS.gene015800:CDS |
| ATCTTCCCAGGCTTTGGTTT+GGG | 0.270502 | 4.3:+2686757 | MS.gene015800:CDS |
| CCGCCACCAACGGCGGATCT+TGG | 0.298243 | 4.3:-2682949 | None:intergenic |
| GCTTACATCTTCCCAGGCTT+TGG | 0.317558 | 4.3:+2686751 | MS.gene015800:CDS |
| GACCGAGGAGAACTACAAAA+AGG | 0.333516 | 4.3:+2686978 | MS.gene015800:CDS |
| GTCCCCACATCGATTGTAAC+TGG | 0.354517 | 4.3:-2684941 | None:intergenic |
| CATCTTCCCAGGCTTTGGTT+TGG | 0.357949 | 4.3:+2686756 | MS.gene015800:CDS |
| AAAGGCAAAACTTATTATTC+TGG | 0.358566 | 4.3:+2686633 | MS.gene015800:CDS |
| CTTAGACAAAAGAGGGCAAC+TGG | 0.358645 | 4.3:+2685004 | MS.gene015800:CDS |
| TTTGCAAAGGAACCTCATAT+TGG | 0.377650 | 4.3:-2683892 | None:intergenic |
| CGCCACCAACGGCGGATCTT+GGG | 0.383451 | 4.3:-2682948 | None:intergenic |
| GGGTACCACCAATCAACTTC+AGG | 0.383890 | 4.3:-2685507 | None:intergenic |
| TGTGGCCATGATGGACCTTC+AGG | 0.388311 | 4.3:+2683919 | MS.gene015800:CDS |
| TGGGAAGATGTAAGCATTGT+TGG | 0.397937 | 4.3:-2686743 | None:intergenic |
| AAGAGAGTCGTAAGAAGATA+TGG | 0.399119 | 4.3:+2685885 | MS.gene015800:CDS |
| TTTGAATTGCTTGCAAAATA+CGG | 0.400987 | 4.3:+2685331 | MS.gene015800:CDS |
| ATGTGCATCCCTCTCTTTCT+CGG | 0.401753 | 4.3:-2683696 | None:intergenic |
| ACAACCGGAGTATATACAAT+TGG | 0.408892 | 4.3:-2684105 | None:intergenic |
| TTCAACACTTCAAGAAGCCT+TGG | 0.417822 | 4.3:+2686061 | MS.gene015800:CDS |
| CCCCTCTGTACCGCAACTAT+AGG | 0.418903 | 4.3:+2687296 | MS.gene015800:CDS |
| CACACTCCTAGATGCTGTTA+AGG | 0.419044 | 4.3:+2686107 | MS.gene015800:CDS |
| ATTGTATATACTCCGGTTGT+TGG | 0.426627 | 4.3:+2684108 | MS.gene015800:CDS |
| TTGTATTCAACAGGATCAAA+TGG | 0.426872 | 4.3:-2686612 | None:intergenic |
| ACATTCCTCTTCCTCGGTGC+TGG | 0.428848 | 4.3:+2685541 | MS.gene015800:CDS |
| AAACTATAACCTGAAGTTGC+TGG | 0.433465 | 4.3:-2683754 | None:intergenic |
| TGTCAGCAGCCAGCAACTTC+AGG | 0.433953 | 4.3:+2683745 | MS.gene015800:CDS |
| TTGATACCTTAACAGCATCT+AGG | 0.434707 | 4.3:-2686113 | None:intergenic |
| ACTGCAGCTGTTGTTCTAGC+TGG | 0.437531 | 4.3:+2685472 | MS.gene015800:CDS |
| TTATGATTTCAGGCAGGAAC+TGG | 0.438073 | 4.3:+2685700 | MS.gene015800:intron |
| TTCTTACGACTCTCTTCTAT+AGG | 0.439698 | 4.3:-2685878 | None:intergenic |
| GAGCATATACAAGCGTCCTC+AGG | 0.443018 | 4.3:+2684152 | MS.gene015800:CDS |
| CTCAGACTGTGAGGTTGGAT+TGG | 0.448482 | 4.3:-2686424 | None:intergenic |
| TACAAAGCCAATTTACCAAC+AGG | 0.449248 | 4.3:-2684764 | None:intergenic |
| CCAAGATCCGCCGTTGGTGG+CGG | 0.452149 | 4.3:+2682949 | MS.gene015800:CDS |
| GGTGAGGCTTGCCAGAAATA+CGG | 0.457098 | 4.3:+2684129 | MS.gene015800:CDS |
| GCACAACATCCGCCAATATG+AGG | 0.461834 | 4.3:+2683880 | MS.gene015800:CDS |
| ACAGTTCTGATTGGATCATC+AGG | 0.464456 | 4.3:+2686228 | MS.gene015800:CDS |
| GCATCTAGGAGTGTGCTAAC+AGG | 0.464697 | 4.3:-2686099 | None:intergenic |
| ATCAAGCCTACAGTTCTGAT+TGG | 0.468764 | 4.3:+2686219 | MS.gene015800:CDS |
| TGGTTTGGGTATAGTGATGT+CGG | 0.471357 | 4.3:+2686771 | MS.gene015800:CDS |
| CTTCTCCAGCACCGAGGAAG+AGG | 0.475135 | 4.3:-2685546 | None:intergenic |
| TAGAGATGGTGAGTCGGTGC+TGG | 0.475443 | 4.3:+2682918 | MS.gene015800:CDS |
| CTCGGTCACTTGCTTCGCCA+AGG | 0.475592 | 4.3:-2686962 | None:intergenic |
| GGTTTGGGTATAGTGATGTC+GGG | 0.476580 | 4.3:+2686772 | MS.gene015800:CDS |
| CACACCTAGTTCATATGCCT+TGG | 0.478256 | 4.3:-2687067 | None:intergenic |
| CTTGGACCTTCTCTGTTGCC+AGG | 0.483919 | 4.3:+2683025 | MS.gene015800:CDS |
| TGCTGACAGTGGGAGGTAAG+AGG | 0.486932 | 4.3:-2683730 | None:intergenic |
| TCAACACTTCAAGAAGCCTT+GGG | 0.487002 | 4.3:+2686062 | MS.gene015800:CDS |
| TGGCAAGCCTCACCAACAAC+CGG | 0.487891 | 4.3:-2684120 | None:intergenic |
| CAAAACTTATTATTCTGGCC+AGG | 0.488294 | 4.3:+2686638 | MS.gene015800:CDS |
| ACTATACCCAAACCAAAGCC+TGG | 0.496340 | 4.3:-2686763 | None:intergenic |
| AGGATCAACTTGTCACCCCT+TGG | 0.496562 | 4.3:+2683007 | MS.gene015800:CDS |
| AGCTGCAAATGTTGCTGCCA+AGG | 0.499193 | 4.3:+2687050 | MS.gene015800:CDS |
| GCATACTTGACAAGATTCTC+AGG | 0.501166 | 4.3:-2687256 | None:intergenic |
| GCAAGCCCTTTGTTGTATTG+TGG | 0.501797 | 4.3:-2683668 | None:intergenic |
| GTGAGGCTTGCCAGAAATAC+GGG | 0.504652 | 4.3:+2684130 | MS.gene015800:CDS |
| TATGGTTGCAGCGGAAGCCT+TGG | 0.505776 | 4.3:+2686945 | MS.gene015800:intron |
| AGCAACATTTGCAGCTATGT+TGG | 0.509394 | 4.3:-2687043 | None:intergenic |
| ACCTATAGTTGCGGTACAGA+GGG | 0.514198 | 4.3:-2687297 | None:intergenic |
| GCAAAGGAACCTCATATTGG+CGG | 0.516748 | 4.3:-2683889 | None:intergenic |
| ATAACTTGAATACTTCTCTC+AGG | 0.517509 | 4.3:-2684324 | None:intergenic |
| CAAGTTATTGTTGTAACTGA+CGG | 0.518216 | 4.3:+2684339 | MS.gene015800:CDS |
| ACTCGGAGATCTTGGATGCC+AGG | 0.520946 | 4.3:+2684377 | MS.gene015800:CDS |
| CGCCGTTGGTGGCGGTGTTG+AGG | 0.523116 | 4.3:+2682957 | MS.gene015800:CDS |
| AGCCCAAGATCCGCCGTTGG+TGG | 0.525009 | 4.3:+2682946 | MS.gene015800:CDS |
| CAACCGGAGTATATACAATT+GGG | 0.525343 | 4.3:-2684104 | None:intergenic |
| AACAATGCTTACATCTTCCC+AGG | 0.526563 | 4.3:+2686745 | MS.gene015800:CDS |
| GTAGCAGCCCTGAAGTTGAT+TGG | 0.526983 | 4.3:+2685499 | MS.gene015800:CDS |
| CACCGACTCACCATCTCTAA+AGG | 0.533747 | 4.3:-2682914 | None:intergenic |
| CCCTTGTTCACCTATAGTTG+CGG | 0.533999 | 4.3:-2687306 | None:intergenic |
| TTGGCTTTGTACTCCGCACT+AGG | 0.536425 | 4.3:+2684776 | MS.gene015800:CDS |
| ACATCGGCCTTAGACAAAAG+AGG | 0.536978 | 4.3:+2684996 | MS.gene015800:CDS |
| GGGATCCACAATACAACAAA+GGG | 0.538634 | 4.3:+2683663 | MS.gene015800:CDS |
| AAGTTGCTGGCTGCTGACAG+TGG | 0.539573 | 4.3:-2683741 | None:intergenic |
| TGCTCTTGAGATGTCAAAGC+AGG | 0.543056 | 4.3:+2685738 | MS.gene015800:CDS |
| ACTGCAGTGAAGCAAAACTA+TGG | 0.543060 | 4.3:+2685176 | MS.gene015800:CDS |
| AGTTGCTGGCTGCTGACAGT+GGG | 0.543658 | 4.3:-2683740 | None:intergenic |
| TGGAAAATGCTTACTGCTGA+AGG | 0.547591 | 4.3:-2684809 | None:intergenic |
| GTACACTCAGACTGTGAGGT+TGG | 0.547757 | 4.3:-2686429 | None:intergenic |
| AGAGGAATGTATGCTCTGGT+AGG | 0.549433 | 4.3:-2685528 | None:intergenic |
| GGTTCCTTTGCAAAAGTATG+TGG | 0.552500 | 4.3:+2683901 | MS.gene015800:CDS |
| CAACGGCGGATCTTGGGCTG+AGG | 0.555211 | 4.3:-2682942 | None:intergenic |
| TTTGATCCTGTTGAATACAA+AGG | 0.555630 | 4.3:+2686615 | MS.gene015800:CDS |
| GGTACCACCAATCAACTTCA+GGG | 0.557944 | 4.3:-2685506 | None:intergenic |
| ATATACTCCGGTTGTTGGTG+AGG | 0.559880 | 4.3:+2684113 | MS.gene015800:CDS |
| ACTTCTTATTGACAATGTTG+AGG | 0.559904 | 4.3:+2684074 | MS.gene015800:CDS |
| GCAAAAGTATGTGGCCATGA+TGG | 0.560034 | 4.3:+2683910 | MS.gene015800:CDS |
| AGCATATACAAGCGTCCTCA+GGG | 0.562435 | 4.3:+2684153 | MS.gene015800:CDS |
| GCAGTGGGTACTCTTTGCTG+AGG | 0.563558 | 4.3:+2683642 | MS.gene015800:intron |
| CTGTCTGTAATTCAGGGTAT+GGG | 0.565443 | 4.3:+2684737 | MS.gene015800:intron |
| ACAAAAGAGGGCAACTGGGA+AGG | 0.565641 | 4.3:+2685009 | MS.gene015800:CDS |
| AGGAAGAGGAATGTATGCTC+TGG | 0.571753 | 4.3:-2685532 | None:intergenic |
| ACACTTAAGTCCTTTAGAGA+TGG | 0.574219 | 4.3:+2682904 | MS.gene015800:CDS |
| GAGCATACATTCCTCTTCCT+CGG | 0.574422 | 4.3:+2685535 | MS.gene015800:CDS |
| GATGATCCAATCAGAACTGT+AGG | 0.578735 | 4.3:-2686225 | None:intergenic |
| CACCTATAGTTGCGGTACAG+AGG | 0.578766 | 4.3:-2687298 | None:intergenic |
| ATCCTCAACACCGCCACCAA+CGG | 0.578871 | 4.3:-2682959 | None:intergenic |
| CAGGGTATGGGAATTCCTGT+TGG | 0.581626 | 4.3:+2684749 | MS.gene015800:intron |
| CATCGGCCTTAGACAAAAGA+GGG | 0.582094 | 4.3:+2684997 | MS.gene015800:CDS |
| TTGCTTTCACCGAGAAAGAG+AGG | 0.584418 | 4.3:+2683687 | MS.gene015800:CDS |
| CAGCTGAGGAGGCGTACACA+TGG | 0.586350 | 4.3:+2686451 | MS.gene015800:CDS |
| GATATGGCTTGTAGACTCAA+AGG | 0.587025 | 4.3:+2685901 | MS.gene015800:CDS |
| CTGATTGGATCATCAGGAGT+GGG | 0.587515 | 4.3:+2686234 | MS.gene015800:CDS |
| CTCAGCCCAAGATCCGCCGT+TGG | 0.587642 | 4.3:+2682943 | MS.gene015800:CDS |
| ATTTACAAAGGAAGTAGTTG+AGG | 0.588311 | 4.3:+2686263 | MS.gene015800:CDS |
| GGCTCGTGTTCATGAGCCCA+AGG | 0.588566 | 4.3:-2686078 | None:intergenic |
| CAGTCATGAACTCGTGCAGA+AGG | 0.588664 | 4.3:-2685157 | None:intergenic |
| CAGTGGGTACTCTTTGCTGA+GGG | 0.589331 | 4.3:+2683643 | MS.gene015800:intron |
| GTCTGAGTGTACAGCTGAGG+AGG | 0.593256 | 4.3:+2686440 | MS.gene015800:CDS |
| GCTCCCAATTGTATATACTC+CGG | 0.593816 | 4.3:+2684101 | MS.gene015800:CDS |
| CTCAACACCGCCACCAACGG+CGG | 0.593882 | 4.3:-2682956 | None:intergenic |
| GCATACCTGAAGGTCCATCA+TGG | 0.594227 | 4.3:-2683924 | None:intergenic |
| CTATACCCAAACCAAAGCCT+GGG | 0.594858 | 4.3:-2686762 | None:intergenic |
| TGCTTTCACCGAGAAAGAGA+GGG | 0.595557 | 4.3:+2683688 | MS.gene015800:CDS |
| GAGGAATGTATGCTCTGGTA+GGG | 0.599160 | 4.3:-2685527 | None:intergenic |
| CTGGCAACAGAGAAGGTCCA+AGG | 0.599866 | 4.3:-2683024 | None:intergenic |
| TTGTTGTAACTGACGGTGAG+CGG | 0.607640 | 4.3:+2684346 | MS.gene015800:CDS |
| CGGTGAAGATTGTGCTACTG+AGG | 0.608903 | 4.3:+2682987 | MS.gene015800:CDS |
| GAAGCATATCATCATGTACT+CGG | 0.608942 | 4.3:-2686801 | None:intergenic |
| TGGCAACAGAGAAGGTCCAA+GGG | 0.610667 | 4.3:-2683023 | None:intergenic |
| GCTGCCAAGGCATATGAACT+AGG | 0.617490 | 4.3:+2687063 | MS.gene015800:CDS |
| TTACCAGTTACAATCGATGT+GGG | 0.618075 | 4.3:+2684938 | MS.gene015800:CDS |
| AGGGATGCACATTATTTGCG+TGG | 0.618100 | 4.3:+2683707 | MS.gene015800:CDS |
| TGCTGGCTGCTGACAGTGGG+AGG | 0.618141 | 4.3:-2683737 | None:intergenic |
| TAAGTACCTGGCAACAGAGA+AGG | 0.619492 | 4.3:-2683031 | None:intergenic |
| TTTACCAGTTACAATCGATG+TGG | 0.620404 | 4.3:+2684937 | MS.gene015800:CDS |
| TTGGAAAGAGCCAAAATGAG+AGG | 0.625032 | 4.3:-2686405 | None:intergenic |
| GGCGGTGTTGAGGATGTCTA+CGG | 0.627021 | 4.3:+2682967 | MS.gene015800:CDS |
| GTCCTTTAGAGATGGTGAGT+CGG | 0.628872 | 4.3:+2682912 | MS.gene015800:CDS |
| AGGGATCCACAATACAACAA+AGG | 0.634750 | 4.3:+2683662 | MS.gene015800:CDS |
| TTGACAAGATTCTCAGGACG+AGG | 0.639476 | 4.3:-2687250 | None:intergenic |
| TCTGATTGGATCATCAGGAG+TGG | 0.643145 | 4.3:+2686233 | MS.gene015800:CDS |
| GCTTTGTACTCCGCACTAGG+AGG | 0.644741 | 4.3:+2684779 | MS.gene015800:CDS |
| TTAGACAAAAGAGGGCAACT+GGG | 0.655554 | 4.3:+2685005 | MS.gene015800:CDS |
| AGGACGAACTCCTCCTAGTG+CGG | 0.656076 | 4.3:-2684789 | None:intergenic |
| ACAGTCTGAGTGTACAGCTG+AGG | 0.665419 | 4.3:+2686437 | MS.gene015800:CDS |
| GCAGCCCTGAAGTTGATTGG+TGG | 0.673097 | 4.3:+2685502 | MS.gene015800:CDS |
| AGCTGTACACTCAGACTGTG+AGG | 0.676280 | 4.3:-2686433 | None:intergenic |
| CTTGGCGAAGCAAGTGACCG+AGG | 0.678598 | 4.3:+2686963 | MS.gene015800:CDS |
| TTTCTGATATCAGAGAAAGG+TGG | 0.681242 | 4.3:-2687012 | None:intergenic |
| TACCAGTTACAATCGATGTG+GGG | 0.682781 | 4.3:+2684939 | MS.gene015800:CDS |
| GGAGGCGTACACATGGAGTG+AGG | 0.696804 | 4.3:+2686458 | MS.gene015800:CDS |
| TTCTTACTTCTCCAGCACCG+AGG | 0.699862 | 4.3:-2685552 | None:intergenic |
| CCTATAGTTGCGGTACAGAG+GGG | 0.701436 | 4.3:-2687296 | None:intergenic |
| GGCAACAGAGAAGGTCCAAG+GGG | 0.714351 | 4.3:-2683022 | None:intergenic |
| AAACTAATATATAGACCCTG+AGG | 0.747130 | 4.3:-2684168 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAATGATTTTGAATAA+GGG | - | chr4.3:2685052-2685071 | None:intergenic | 10.0% |
| !!! | TAATAAAATGATTTTGAATA+AGG | - | chr4.3:2685053-2685072 | None:intergenic | 10.0% |
| !!! | TATTTTTCAAATTTTCAATT+TGG | + | chr4.3:2685973-2685992 | MS.gene015800:intron | 10.0% |
| !! | AAAATGGAAATATTAAACAA+AGG | - | chr4.3:2684902-2684921 | None:intergenic | 15.0% |
| !! | AATTATATACAAACTAATGT+AGG | - | chr4.3:2684219-2684238 | None:intergenic | 15.0% |
| !! | ATTTCAAATTTGAATTTATG+TGG | + | chr4.3:2685228-2685247 | MS.gene015800:intron | 15.0% |
| !! | TTTACTTGTATTTATTTATG+AGG | + | chr4.3:2685098-2685117 | MS.gene015800:intron | 15.0% |
| !!! | ATATGTTATTTATTTTCTAC+AGG | + | chr4.3:2683844-2683863 | MS.gene015800:intron | 15.0% |
| !!! | TACAGAATATTTTTTTATGA+TGG | + | chr4.3:2683162-2683181 | MS.gene015800:intron | 15.0% |
| !!! | TTTAATATTTCCATTTTTTC+TGG | + | chr4.3:2684905-2684924 | MS.gene015800:intron | 15.0% |
| !! | AAAAATTAAGAAATACATGC+CGG | - | chr4.3:2685410-2685429 | None:intergenic | 20.0% |
| !! | AACTAATTTATTCTCTTACA+GGG | + | chr4.3:2686009-2686028 | MS.gene015800:intron | 20.0% |
| !! | AATAAGCTGAAAATAACTTA+TGG | + | chr4.3:2683252-2683271 | MS.gene015800:intron | 20.0% |
| !! | AGAATTAAAAACATGTCTAA+AGG | - | chr4.3:2686170-2686189 | None:intergenic | 20.0% |
| !! | GTCATATGAAATAAAAACAA+AGG | - | chr4.3:2683534-2683553 | None:intergenic | 20.0% |
| !! | TAAATACAAGTAAAATGATG+CGG | - | chr4.3:2685092-2685111 | None:intergenic | 20.0% |
| !! | TAACTAATTTATTCTCTTAC+AGG | + | chr4.3:2686008-2686027 | MS.gene015800:intron | 20.0% |
| !! | TAATATCATGGTGAATAATA+AGG | - | chr4.3:2684694-2684713 | None:intergenic | 20.0% |
| !! | TTCTCATATTAATAACTTAC+AGG | - | chr4.3:2686833-2686852 | None:intergenic | 20.0% |
| !!! | ATTAATTAATGCATTTTCTC+AGG | + | chr4.3:2685447-2685466 | MS.gene015800:intron | 20.0% |
| !!! | GAAAACATGATAAATTTTCA+TGG | + | chr4.3:2685929-2685948 | MS.gene015800:intron | 20.0% |
| !!! | TCATTTTTTGTTATGATTTC+AGG | + | chr4.3:2685690-2685709 | MS.gene015800:intron | 20.0% |
| !!! | TTAAGTTGTTTATACAAACA+AGG | - | chr4.3:2684433-2684452 | None:intergenic | 20.0% |
| !!! | TTAATTAATGCATTTTCTCA+GGG | + | chr4.3:2685448-2685467 | MS.gene015800:intron | 20.0% |
| ! | AAAGGCAAAACTTATTATTC+TGG | + | chr4.3:2686633-2686652 | MS.gene015800:CDS | 25.0% |
| ! | AAATATATCTCCATCATGTT+TGG | + | chr4.3:2686372-2686391 | MS.gene015800:intron | 25.0% |
| ! | AAGGAAATAATCAGATAGAA+TGG | - | chr4.3:2686712-2686731 | None:intergenic | 25.0% |
| ! | AGGAAAAAAAAATACATGTC+TGG | - | chr4.3:2687134-2687153 | None:intergenic | 25.0% |
| ! | ATATATTGAGAACCAAAGAA+AGG | - | chr4.3:2683828-2683847 | None:intergenic | 25.0% |
| ! | ATGAACGTTTAATGAATGTT+TGG | + | chr4.3:2683136-2683155 | MS.gene015800:intron | 25.0% |
| ! | CTCTGATATCAGAAAAATTT+CGG | + | chr4.3:2687020-2687039 | MS.gene015800:CDS | 25.0% |
| ! | CTTATCAAGTACAAATAAGA+AGG | - | chr4.3:2685591-2685610 | None:intergenic | 25.0% |
| ! | GAAATATTGTTGTCAAATAG+TGG | + | chr4.3:2683389-2683408 | MS.gene015800:intron | 25.0% |
| ! | GGAAAAAAAAATACATGTCT+GGG | - | chr4.3:2687133-2687152 | None:intergenic | 25.0% |
| ! | TAAACTAACAACATCAAATG+AGG | + | chr4.3:2683974-2683993 | MS.gene015800:intron | 25.0% |
| ! | TAACAAAAAATGAGTTAGAC+TGG | - | chr4.3:2685683-2685702 | None:intergenic | 25.0% |
| ! | TGTTTATATACCATTAACAC+TGG | + | chr4.3:2685777-2685796 | MS.gene015800:intron | 25.0% |
| ! | TTTGAATTGCTTGCAAAATA+CGG | + | chr4.3:2685331-2685350 | MS.gene015800:CDS | 25.0% |
| !! | ATTAGTTTGAAAGAGAAGTA+TGG | + | chr4.3:2684183-2684202 | MS.gene015800:intron | 25.0% |
| !! | ATTTTTCTGATATCAGAGAA+AGG | - | chr4.3:2687018-2687037 | None:intergenic | 25.0% |
| !! | GATTATCTGAAATTGTAAGA+TGG | - | chr4.3:2686202-2686221 | None:intergenic | 25.0% |
| !! | TAATTAATGCATTTTCTCAG+GGG | + | chr4.3:2685449-2685468 | MS.gene015800:intron | 25.0% |
| !! | TTTATGAGGCTACATTTTAT+TGG | + | chr4.3:2685112-2685131 | MS.gene015800:intron | 25.0% |
| !!! | AATATTTCCATTTTTTCTGG+TGG | + | chr4.3:2684908-2684927 | MS.gene015800:intron | 25.0% |
| !!! | CATTTTATTGGTTTCTTCTT+AGG | + | chr4.3:2685124-2685143 | MS.gene015800:intron | 25.0% |
| !!! | GCAGTTTTGTTTAGTTTAAA+AGG | - | chr4.3:2687196-2687215 | None:intergenic | 25.0% |
| !!! | TTCTTGAGGTTTTAAAAAAC+TGG | + | chr4.3:2684301-2684320 | MS.gene015800:CDS | 25.0% |
| AAACTAATATATAGACCCTG+AGG | - | chr4.3:2684171-2684190 | None:intergenic | 30.0% | |
| AAAGAAGACCAATACTTAAC+CGG | - | chr4.3:2686518-2686537 | None:intergenic | 30.0% | |
| ACAAAAGAAACCAGTGTTAA+TGG | - | chr4.3:2685790-2685809 | None:intergenic | 30.0% | |
| ACTTCTTATTGACAATGTTG+AGG | + | chr4.3:2684074-2684093 | MS.gene015800:CDS | 30.0% | |
| AGTGGGAAAAACATTTACAA+AGG | + | chr4.3:2686251-2686270 | MS.gene015800:CDS | 30.0% | |
| ATAAATACTCGTTATGAGAG+CGG | - | chr4.3:2686326-2686345 | None:intergenic | 30.0% | |
| ATAACTTGAATACTTCTCTC+AGG | - | chr4.3:2684327-2684346 | None:intergenic | 30.0% | |
| ATGGTGAATAATAAGGTCTT+AGG | - | chr4.3:2684687-2684706 | None:intergenic | 30.0% | |
| ATTTACAAAGGAAGTAGTTG+AGG | + | chr4.3:2686263-2686282 | MS.gene015800:CDS | 30.0% | |
| CAAGTTATTGTTGTAACTGA+CGG | + | chr4.3:2684339-2684358 | MS.gene015800:CDS | 30.0% | |
| CTAGTGTTAGCATAATATCA+TGG | - | chr4.3:2684706-2684725 | None:intergenic | 30.0% | |
| CTGAAATTGTAAGATGGTTA+TGG | - | chr4.3:2686196-2686215 | None:intergenic | 30.0% | |
| GTATTATGTCTTACACATAC+CGG | + | chr4.3:2685388-2685407 | MS.gene015800:intron | 30.0% | |
| GTTTATACAAACAAGGCTTT+AGG | - | chr4.3:2684426-2684445 | None:intergenic | 30.0% | |
| TGGTGAATAATAAGGTCTTA+GGG | - | chr4.3:2684686-2684705 | None:intergenic | 30.0% | |
| TTGTACTACATAGTGTATCA+CGG | - | chr4.3:2683364-2683383 | None:intergenic | 30.0% | |
| TTGTATTCAACAGGATCAAA+TGG | - | chr4.3:2686615-2686634 | None:intergenic | 30.0% | |
| TTTGATCCTGTTGAATACAA+AGG | + | chr4.3:2686615-2686634 | MS.gene015800:CDS | 30.0% | |
| ! | AAAAACAAAGGTGCAATCAA+TGG | - | chr4.3:2683522-2683541 | None:intergenic | 30.0% |
| ! | CTGAATGATGAGTTTTACAT+CGG | + | chr4.3:2684980-2684999 | MS.gene015800:CDS | 30.0% |
| ! | TGTTTTCAACGATGATATAC+AGG | + | chr4.3:2685366-2685385 | MS.gene015800:CDS | 30.0% |
| ! | TTAATGAAAGTGTGATGAGT+TGG | - | chr4.3:2683957-2683976 | None:intergenic | 30.0% |
| !! | ACGAACATTTGTGTCATTTA+TGG | + | chr4.3:2686927-2686946 | MS.gene015800:intron | 30.0% |
| !! | TCATAGATTGACTTGATTTG+TGG | - | chr4.3:2683793-2683812 | None:intergenic | 30.0% |
| !! | TTTTTGTTATGATTTCAGGC+AGG | + | chr4.3:2685694-2685713 | MS.gene015800:intron | 30.0% |
| !!! | AGATGTTGTTTTCCTTTCTT+TGG | + | chr4.3:2683813-2683832 | MS.gene015800:intron | 30.0% |
| !!! | GTGAAGAAAATTTTAGAACC+TGG | - | chr4.3:2686659-2686678 | None:intergenic | 30.0% |
| AAACTATAACCTGAAGTTGC+TGG | - | chr4.3:2683757-2683776 | None:intergenic | 35.0% | |
| AACTATGCTGTCTGTAATTC+AGG | + | chr4.3:2684730-2684749 | MS.gene015800:intron | 35.0% | |
| AAGAAGACCAATACTTAACC+GGG | - | chr4.3:2686517-2686536 | None:intergenic | 35.0% | |
| AAGAGAGTCGTAAGAAGATA+TGG | + | chr4.3:2685885-2685904 | MS.gene015800:CDS | 35.0% | |
| ACAACCGGAGTATATACAAT+TGG | - | chr4.3:2684108-2684127 | None:intergenic | 35.0% | |
| ACTATGCTGTCTGTAATTCA+GGG | + | chr4.3:2684731-2684750 | MS.gene015800:intron | 35.0% | |
| ATAAGGTCTTAGGGTCTATT+TGG | - | chr4.3:2684677-2684696 | None:intergenic | 35.0% | |
| ATTGTATATACTCCGGTTGT+TGG | + | chr4.3:2684108-2684127 | MS.gene015800:CDS | 35.0% | |
| CAAAACTTATTATTCTGGCC+AGG | + | chr4.3:2686638-2686657 | MS.gene015800:CDS | 35.0% | |
| CAACCATAAACTCTCTCAAA+CGG | + | chr4.3:2683286-2683305 | MS.gene015800:intron | 35.0% | |
| CAACCGGAGTATATACAATT+GGG | - | chr4.3:2684107-2684126 | None:intergenic | 35.0% | |
| GAAGCATATCATCATGTACT+CGG | - | chr4.3:2686804-2686823 | None:intergenic | 35.0% | |
| GAATGAGAAGAGACAATAGA+TGG | - | chr4.3:2684832-2684851 | None:intergenic | 35.0% | |
| TAAATACTCGTTATGAGAGC+GGG | - | chr4.3:2686325-2686344 | None:intergenic | 35.0% | |
| TACAAAGCCAATTTACCAAC+AGG | - | chr4.3:2684767-2684786 | None:intergenic | 35.0% | |
| TCATAAGATGTCAAGTCAAG+CGG | + | chr4.3:2683311-2683330 | MS.gene015800:intron | 35.0% | |
| TGATTCAGTGTTGTCAACTA+CGG | - | chr4.3:2683458-2683477 | None:intergenic | 35.0% | |
| TGGTGAAAAAGTTCTTGTAC+AGG | + | chr4.3:2685196-2685215 | MS.gene015800:CDS | 35.0% | |
| TTACCAGTTACAATCGATGT+GGG | + | chr4.3:2684938-2684957 | MS.gene015800:CDS | 35.0% | |
| TTCTTACGACTCTCTTCTAT+AGG | - | chr4.3:2685881-2685900 | None:intergenic | 35.0% | |
| TTGATACCTTAACAGCATCT+AGG | - | chr4.3:2686116-2686135 | None:intergenic | 35.0% | |
| TTTACCAGTTACAATCGATG+TGG | + | chr4.3:2684937-2684956 | MS.gene015800:CDS | 35.0% | |
| TTTCTGATATCAGAGAAAGG+TGG | - | chr4.3:2687015-2687034 | None:intergenic | 35.0% | |
| TTTGCAAAGGAACCTCATAT+TGG | - | chr4.3:2683895-2683914 | None:intergenic | 35.0% | |
| ! | AAGAATTTTTCCCCTGCAAA+AGG | - | chr4.3:2684286-2684305 | None:intergenic | 35.0% |
| ! | ACACTTAAGTCCTTTAGAGA+TGG | + | chr4.3:2682904-2682923 | MS.gene015800:CDS | 35.0% |
| ! | ATAGTCTTACTTCATCTGCA+TGG | - | chr4.3:2685639-2685658 | None:intergenic | 35.0% |
| ! | GATTCTCCTTTAGAAATACC+TGG | - | chr4.3:2684398-2684417 | None:intergenic | 35.0% |
| ! | GTTTTGCCTTTGTATTCAAC+AGG | - | chr4.3:2686624-2686643 | None:intergenic | 35.0% |
| !! | AGCTTTTGTTTACCTTTTGC+AGG | + | chr4.3:2684271-2684290 | MS.gene015800:intron | 35.0% |
| !! | ATTGTTTCTGTTGCAGACTA+AGG | + | chr4.3:2685853-2685872 | MS.gene015800:intron | 35.0% |
| !! | CTTTTGTTTACCTTTTGCAG+GGG | + | chr4.3:2684273-2684292 | MS.gene015800:intron | 35.0% |
| !! | GCTTATTTTCGCGAACTTTA+CGG | - | chr4.3:2683239-2683258 | None:intergenic | 35.0% |
| !! | GCTTTTGTTTACCTTTTGCA+GGG | + | chr4.3:2684272-2684291 | MS.gene015800:intron | 35.0% |
| AACAATGCTTACATCTTCCC+AGG | + | chr4.3:2686745-2686764 | MS.gene015800:CDS | 40.0% | |
| AACACTGAATCAATCCAGAC+AGG | + | chr4.3:2683466-2683485 | MS.gene015800:intron | 40.0% | |
| AACCTATTGCGAGTCATGAA+GGG | - | chr4.3:2686146-2686165 | None:intergenic | 40.0% | |
| ACACTAGCCACCAGAAAAAA+TGG | - | chr4.3:2684918-2684937 | None:intergenic | 40.0% | |
| ACCGAGGAGAACTACAAAAA+GGG | + | chr4.3:2686979-2686998 | MS.gene015800:CDS | 40.0% | |
| ACTGCAGTGAAGCAAAACTA+TGG | + | chr4.3:2685176-2685195 | MS.gene015800:CDS | 40.0% | |
| ACTGCTTCAACTCTCATTGT+AGG | + | chr4.3:2687211-2687230 | MS.gene015800:intron | 40.0% | |
| AGACCGTTTGAGAGAGTTTA+TGG | - | chr4.3:2683292-2683311 | None:intergenic | 40.0% | |
| AGCAACATTTGCAGCTATGT+TGG | - | chr4.3:2687046-2687065 | None:intergenic | 40.0% | |
| AGGGATCCACAATACAACAA+AGG | + | chr4.3:2683662-2683681 | MS.gene015800:CDS | 40.0% | |
| AGTCTCAGTAGTGTGTATGT+CGG | + | chr4.3:2684628-2684647 | MS.gene015800:intron | 40.0% | |
| ATGCATGTGATGTAAGTACC+TGG | - | chr4.3:2683046-2683065 | None:intergenic | 40.0% | |
| ATTTGCCCGTTTCCGAAAAA+AGG | + | chr4.3:2686563-2686582 | MS.gene015800:intron | 40.0% | |
| CTACGGATCACGGAAATTAA+TGG | - | chr4.3:2683441-2683460 | None:intergenic | 40.0% | |
| CTAGAACAGACTAAGCTCTA+AGG | - | chr4.3:2683493-2683512 | None:intergenic | 40.0% | |
| CTGTCTGTAATTCAGGGTAT+GGG | + | chr4.3:2684737-2684756 | MS.gene015800:intron | 40.0% | |
| GATGATCCAATCAGAACTGT+AGG | - | chr4.3:2686228-2686247 | None:intergenic | 40.0% | |
| GCATACTTGACAAGATTCTC+AGG | - | chr4.3:2687259-2687278 | None:intergenic | 40.0% | |
| GCTCCCAATTGTATATACTC+CGG | + | chr4.3:2684101-2684120 | MS.gene015800:CDS | 40.0% | |
| GGACTGAGATAGCGTTTAAA+AGG | - | chr4.3:2687154-2687173 | None:intergenic | 40.0% | |
| GGGATCCACAATACAACAAA+GGG | + | chr4.3:2683663-2683682 | MS.gene015800:CDS | 40.0% | |
| TACACACTACTGAGACTGTT+TGG | - | chr4.3:2684625-2684644 | None:intergenic | 40.0% | |
| TACCAGTTACAATCGATGTG+GGG | + | chr4.3:2684939-2684958 | MS.gene015800:CDS | 40.0% | |
| TCAACACTTCAAGAAGCCTT+GGG | + | chr4.3:2686062-2686081 | MS.gene015800:CDS | 40.0% | |
| TCAAGTACGACATTCATTGC+AGG | + | chr4.3:2684239-2684258 | MS.gene015800:intron | 40.0% | |
| TGGAAAATGCTTACTGCTGA+AGG | - | chr4.3:2684812-2684831 | None:intergenic | 40.0% | |
| TGTATATGCTCCCGTATTTC+TGG | - | chr4.3:2684143-2684162 | None:intergenic | 40.0% | |
| TTAGACAAAAGAGGGCAACT+GGG | + | chr4.3:2685005-2685024 | MS.gene015800:CDS | 40.0% | |
| TTATGATTTCAGGCAGGAAC+TGG | + | chr4.3:2685700-2685719 | MS.gene015800:intron | 40.0% | |
| TTCAACACTTCAAGAAGCCT+TGG | + | chr4.3:2686061-2686080 | MS.gene015800:CDS | 40.0% | |
| TTCAACTCTCATTGTAGGCT+TGG | + | chr4.3:2687216-2687235 | MS.gene015800:intron | 40.0% | |
| TTGCAGGGGAAAAATTCTTG+AGG | + | chr4.3:2684287-2684306 | MS.gene015800:intron | 40.0% | |
| TTGGAAAGAGCCAAAATGAG+AGG | - | chr4.3:2686408-2686427 | None:intergenic | 40.0% | |
| TTTGCCCGTTTCCGAAAAAA+GGG | + | chr4.3:2686564-2686583 | MS.gene015800:intron | 40.0% | |
| ! | ACAGTTCTGATTGGATCATC+AGG | + | chr4.3:2686228-2686247 | MS.gene015800:CDS | 40.0% |
| ! | ATCAAGCCTACAGTTCTGAT+TGG | + | chr4.3:2686219-2686238 | MS.gene015800:CDS | 40.0% |
| ! | ATGGCCACATACTTTTGCAA+AGG | - | chr4.3:2683908-2683927 | None:intergenic | 40.0% |
| ! | ATGTTGTTGTTGTCGTCAAC+AGG | + | chr4.3:2684026-2684045 | MS.gene015800:intron | 40.0% |
| ! | ATTGTTGGACTGCATTGACA+AGG | - | chr4.3:2686731-2686750 | None:intergenic | 40.0% |
| ! | GAGTTAGACTGGCTAATGTA+GGG | - | chr4.3:2685672-2685691 | None:intergenic | 40.0% |
| ! | GATATGGCTTGTAGACTCAA+AGG | + | chr4.3:2685901-2685920 | MS.gene015800:CDS | 40.0% |
| ! | GGCTCTTGAACCTATTTTCT+CGG | + | chr4.3:2685249-2685268 | MS.gene015800:intron | 40.0% |
| ! | GGGAATTCCTGTTGGTAAAT+TGG | + | chr4.3:2684757-2684776 | MS.gene015800:CDS | 40.0% |
| ! | GGTTCCTTTGCAAAAGTATG+TGG | + | chr4.3:2683901-2683920 | MS.gene015800:CDS | 40.0% |
| ! | TGAGTTAGACTGGCTAATGT+AGG | - | chr4.3:2685673-2685692 | None:intergenic | 40.0% |
| ! | TGGATGCCAGGTATTTCTAA+AGG | + | chr4.3:2684389-2684408 | MS.gene015800:intron | 40.0% |
| ! | TGGGAAGATGTAAGCATTGT+TGG | - | chr4.3:2686746-2686765 | None:intergenic | 40.0% |
| ! | TGGTTTGGGTATAGTGATGT+CGG | + | chr4.3:2686771-2686790 | MS.gene015800:CDS | 40.0% |
| !! | TGTGTCATTTATGGTTGCAG+CGG | + | chr4.3:2686936-2686955 | MS.gene015800:intron | 40.0% |
| !!! | AAATCGCACGACCCTTTTTT+CGG | - | chr4.3:2686578-2686597 | None:intergenic | 40.0% |
| AAGTCAAGCGGAAGCTATAG+CGG | + | chr4.3:2683323-2683342 | MS.gene015800:intron | 45.0% | |
| AATCTGCAGGCCAAACATGA+TGG | - | chr4.3:2686385-2686404 | None:intergenic | 45.0% | |
| ACATCGGCCTTAGACAAAAG+AGG | + | chr4.3:2684996-2685015 | MS.gene015800:CDS | 45.0% | |
| ACCTATAGTTGCGGTACAGA+GGG | - | chr4.3:2687300-2687319 | None:intergenic | 45.0% | |
| ACTATACCCAAACCAAAGCC+TGG | - | chr4.3:2686766-2686785 | None:intergenic | 45.0% | |
| AGAGGAATGTATGCTCTGGT+AGG | - | chr4.3:2685531-2685550 | None:intergenic | 45.0% | |
| AGCATATACAAGCGTCCTCA+GGG | + | chr4.3:2684153-2684172 | MS.gene015800:CDS | 45.0% | |
| AGGAAGAGGAATGTATGCTC+TGG | - | chr4.3:2685535-2685554 | None:intergenic | 45.0% | |
| AGGGATGCACATTATTTGCG+TGG | + | chr4.3:2683707-2683726 | MS.gene015800:CDS | 45.0% | |
| ATATACTCCGGTTGTTGGTG+AGG | + | chr4.3:2684113-2684132 | MS.gene015800:CDS | 45.0% | |
| ATGTGCATCCCTCTCTTTCT+CGG | - | chr4.3:2683699-2683718 | None:intergenic | 45.0% | |
| CAACCTATTGCGAGTCATGA+AGG | - | chr4.3:2686147-2686166 | None:intergenic | 45.0% | |
| CAATCAGACGCCGAGAAAAT+AGG | - | chr4.3:2685262-2685281 | None:intergenic | 45.0% | |
| CACACCTAGTTCATATGCCT+TGG | - | chr4.3:2687070-2687089 | None:intergenic | 45.0% | |
| CACACTCCTAGATGCTGTTA+AGG | + | chr4.3:2686107-2686126 | MS.gene015800:CDS | 45.0% | |
| CATCGGCCTTAGACAAAAGA+GGG | + | chr4.3:2684997-2685016 | MS.gene015800:CDS | 45.0% | |
| CCAAAATGAGAGGAATCTGC+AGG | - | chr4.3:2686398-2686417 | None:intergenic | 45.0% | |
| CTATACCCAAACCAAAGCCT+GGG | - | chr4.3:2686765-2686784 | None:intergenic | 45.0% | |
| CTGATTGGATCATCAGGAGT+GGG | + | chr4.3:2686234-2686253 | MS.gene015800:CDS | 45.0% | |
| CTGTAGACCCGGTTAAGTAT+TGG | + | chr4.3:2686507-2686526 | MS.gene015800:intron | 45.0% | |
| CTTAGACAAAAGAGGGCAAC+TGG | + | chr4.3:2685004-2685023 | MS.gene015800:CDS | 45.0% | |
| GACCGAGGAGAACTACAAAA+AGG | + | chr4.3:2686978-2686997 | MS.gene015800:CDS | 45.0% | |
| GAGCATACATTCCTCTTCCT+CGG | + | chr4.3:2685535-2685554 | MS.gene015800:CDS | 45.0% | |
| GAGGAATGTATGCTCTGGTA+GGG | - | chr4.3:2685530-2685549 | None:intergenic | 45.0% | |
| GCAAAGGAACCTCATATTGG+CGG | - | chr4.3:2683892-2683911 | None:intergenic | 45.0% | |
| GCTGTCTGTAATTCAGGGTA+TGG | + | chr4.3:2684736-2684755 | MS.gene015800:intron | 45.0% | |
| GGTACCACCAATCAACTTCA+GGG | - | chr4.3:2685509-2685528 | None:intergenic | 45.0% | |
| GGTTTGGGTATAGTGATGTC+GGG | + | chr4.3:2686772-2686791 | MS.gene015800:CDS | 45.0% | |
| GTAACTGTCTACACTGCAGT+GGG | + | chr4.3:2683627-2683646 | MS.gene015800:intron | 45.0% | |
| GTGTTGTCAACTACGGATCA+CGG | - | chr4.3:2683451-2683470 | None:intergenic | 45.0% | |
| TAAGTACCTGGCAACAGAGA+AGG | - | chr4.3:2683034-2683053 | None:intergenic | 45.0% | |
| TCTGATTGGATCATCAGGAG+TGG | + | chr4.3:2686233-2686252 | MS.gene015800:CDS | 45.0% | |
| TGCTCTTGAGATGTCAAAGC+AGG | + | chr4.3:2685738-2685757 | MS.gene015800:CDS | 45.0% | |
| TGCTTTCACCGAGAAAGAGA+GGG | + | chr4.3:2683688-2683707 | MS.gene015800:CDS | 45.0% | |
| TGGAATGCATGCATACCTGA+AGG | - | chr4.3:2683937-2683956 | None:intergenic | 45.0% | |
| TGTAACTGTCTACACTGCAG+TGG | + | chr4.3:2683626-2683645 | MS.gene015800:intron | 45.0% | |
| TTGACAAGATTCTCAGGACG+AGG | - | chr4.3:2687253-2687272 | None:intergenic | 45.0% | |
| TTGCTTTCACCGAGAAAGAG+AGG | + | chr4.3:2683687-2683706 | MS.gene015800:CDS | 45.0% | |
| TTGTTGTAACTGACGGTGAG+CGG | + | chr4.3:2684346-2684365 | MS.gene015800:CDS | 45.0% | |
| ! | ATCTTCCCAGGCTTTGGTTT+GGG | + | chr4.3:2686757-2686776 | MS.gene015800:CDS | 45.0% |
| ! | ATGGCTTGTAGACTCAAAGG+TGG | + | chr4.3:2685904-2685923 | MS.gene015800:intron | 45.0% |
| ! | CAGTTGCCCTCTTTTGTCTA+AGG | - | chr4.3:2685006-2685025 | None:intergenic | 45.0% |
| ! | CCTGCAGATTCCTCTCATTT+TGG | + | chr4.3:2686395-2686414 | MS.gene015800:intron | 45.0% |
| ! | GCAAAAGTATGTGGCCATGA+TGG | + | chr4.3:2683910-2683929 | MS.gene015800:CDS | 45.0% |
| ! | GCAAGCCCTTTGTTGTATTG+TGG | - | chr4.3:2683671-2683690 | None:intergenic | 45.0% |
| ! | GCCCTTTTTGTAGTTCTCCT+CGG | - | chr4.3:2686983-2687002 | None:intergenic | 45.0% |
| ! | GTCCTTTAGAGATGGTGAGT+CGG | + | chr4.3:2682912-2682931 | MS.gene015800:CDS | 45.0% |
| !!! | ACGACCCTTTTTTCGGAAAC+GGG | - | chr4.3:2686571-2686590 | None:intergenic | 45.0% |
| !!! | ATTTTGGGACTCGGAGATCT+TGG | + | chr4.3:2684369-2684388 | MS.gene015800:CDS | 45.0% |
| !!! | CACGACCCTTTTTTCGGAAA+CGG | - | chr4.3:2686572-2686591 | None:intergenic | 45.0% |
| ACAAAAGAGGGCAACTGGGA+AGG | + | chr4.3:2685009-2685028 | MS.gene015800:CDS | 50.0% | |
| ACAGTCTGAGTGTACAGCTG+AGG | + | chr4.3:2686437-2686456 | MS.gene015800:CDS | 50.0% | |
| ACTGCAGCTGTTGTTCTAGC+TGG | + | chr4.3:2685472-2685491 | MS.gene015800:CDS | 50.0% | |
| AGAACAGAGAAGCGACAGAG+AGG | - | chr4.3:2683594-2683613 | None:intergenic | 50.0% | |
| AGCTGCAAATGTTGCTGCCA+AGG | + | chr4.3:2687050-2687069 | MS.gene015800:CDS | 50.0% | |
| AGCTGTACACTCAGACTGTG+AGG | - | chr4.3:2686436-2686455 | None:intergenic | 50.0% | |
| AGGATCAACTTGTCACCCCT+TGG | + | chr4.3:2683007-2683026 | MS.gene015800:CDS | 50.0% | |
| CACCTATAGTTGCGGTACAG+AGG | - | chr4.3:2687301-2687320 | None:intergenic | 50.0% | |
| CAGGGTATGGGAATTCCTGT+TGG | + | chr4.3:2684749-2684768 | MS.gene015800:intron | 50.0% | |
| CAGTCATGAACTCGTGCAGA+AGG | - | chr4.3:2685160-2685179 | None:intergenic | 50.0% | |
| CAGTGGGTACTCTTTGCTGA+GGG | + | chr4.3:2683643-2683662 | MS.gene015800:intron | 50.0% | |
| CCGGGTCTACAGAAAAGATG+CGG | - | chr4.3:2686499-2686518 | None:intergenic | 50.0% | |
| CCTATAGTTGCGGTACAGAG+GGG | - | chr4.3:2687299-2687318 | None:intergenic | 50.0% | |
| CTCAGACTGTGAGGTTGGAT+TGG | - | chr4.3:2686427-2686446 | None:intergenic | 50.0% | |
| GAGCATATACAAGCGTCCTC+AGG | + | chr4.3:2684152-2684171 | MS.gene015800:CDS | 50.0% | |
| GCACAACATCCGCCAATATG+AGG | + | chr4.3:2683880-2683899 | MS.gene015800:CDS | 50.0% | |
| GCATACCTGAAGGTCCATCA+TGG | - | chr4.3:2683927-2683946 | None:intergenic | 50.0% | |
| GCTGCCAAGGCATATGAACT+AGG | + | chr4.3:2687063-2687082 | MS.gene015800:CDS | 50.0% | |
| GCTTACATCTTCCCAGGCTT+TGG | + | chr4.3:2686751-2686770 | MS.gene015800:CDS | 50.0% | |
| GCTTGTAGACTCAAAGGTGG+TGG | + | chr4.3:2685907-2685926 | MS.gene015800:intron | 50.0% | |
| GGGTACCACCAATCAACTTC+AGG | - | chr4.3:2685510-2685529 | None:intergenic | 50.0% | |
| GGTGAGGCTTGCCAGAAATA+CGG | + | chr4.3:2684129-2684148 | MS.gene015800:CDS | 50.0% | |
| GTACACTCAGACTGTGAGGT+TGG | - | chr4.3:2686432-2686451 | None:intergenic | 50.0% | |
| GTCCCTTCATGACTCGCAAT+AGG | + | chr4.3:2686141-2686160 | MS.gene015800:intron | 50.0% | |
| GTGAGGCTTGCCAGAAATAC+GGG | + | chr4.3:2684130-2684149 | MS.gene015800:CDS | 50.0% | |
| GTTGTTGTCGTCAACAGGAG+AGG | + | chr4.3:2684031-2684050 | MS.gene015800:intron | 50.0% | |
| TGGCAACAGAGAAGGTCCAA+GGG | - | chr4.3:2683026-2683045 | None:intergenic | 50.0% | |
| TTCTTACTTCTCCAGCACCG+AGG | - | chr4.3:2685555-2685574 | None:intergenic | 50.0% | |
| ! | CATCTTCCCAGGCTTTGGTT+TGG | + | chr4.3:2686756-2686775 | MS.gene015800:CDS | 50.0% |
| ! | CCGCATCTTTTCTGTAGACC+CGG | + | chr4.3:2686496-2686515 | MS.gene015800:intron | 50.0% |
| ! | CGGTGAAGATTGTGCTACTG+AGG | + | chr4.3:2682987-2683006 | MS.gene015800:CDS | 50.0% |
| ! | GCATCTAGGAGTGTGCTAAC+AGG | - | chr4.3:2686102-2686121 | None:intergenic | 50.0% |
| ! | GTAGCAGCCCTGAAGTTGAT+TGG | + | chr4.3:2685499-2685518 | MS.gene015800:CDS | 50.0% |
| ! | GTCCCCACATCGATTGTAAC+TGG | - | chr4.3:2684944-2684963 | None:intergenic | 50.0% |
| ! | GTCGTGCGATTTTCGCTAGT+GGG | + | chr4.3:2686586-2686605 | MS.gene015800:CDS | 50.0% |
| !! | AACTGACGGTGAGCGGATTT+TGG | + | chr4.3:2684353-2684372 | MS.gene015800:CDS | 50.0% |
| !! | ACTGACGGTGAGCGGATTTT+GGG | + | chr4.3:2684354-2684373 | MS.gene015800:CDS | 50.0% |
| !! | CACCGACTCACCATCTCTAA+AGG | - | chr4.3:2682917-2682936 | None:intergenic | 50.0% |
| !! | CTAAGCTCTAAGGACCTGTC+TGG | - | chr4.3:2683483-2683502 | None:intergenic | 50.0% |
| !! | TTGGCTTTGTACTCCGCACT+AGG | + | chr4.3:2684776-2684795 | MS.gene015800:CDS | 50.0% |
| ACTCGGAGATCTTGGATGCC+AGG | + | chr4.3:2684377-2684396 | MS.gene015800:CDS | 55.0% | |
| AGGACGAACTCCTCCTAGTG+CGG | - | chr4.3:2684792-2684811 | None:intergenic | 55.0% | |
| ATCCTCAACACCGCCACCAA+CGG | - | chr4.3:2682962-2682981 | None:intergenic | 55.0% | |
| CCCCTCTGTACCGCAACTAT+AGG | + | chr4.3:2687296-2687315 | MS.gene015800:CDS | 55.0% | |
| CTGGCAACAGAGAAGGTCCA+AGG | - | chr4.3:2683027-2683046 | None:intergenic | 55.0% | |
| CTTGGACCTTCTCTGTTGCC+AGG | + | chr4.3:2683025-2683044 | MS.gene015800:CDS | 55.0% | |
| GCAGTGGGTACTCTTTGCTG+AGG | + | chr4.3:2683642-2683661 | MS.gene015800:intron | 55.0% | |
| GCTTTGTACTCCGCACTAGG+AGG | + | chr4.3:2684779-2684798 | MS.gene015800:CDS | 55.0% | |
| GGCAACAGAGAAGGTCCAAG+GGG | - | chr4.3:2683025-2683044 | None:intergenic | 55.0% | |
| GTCTGAGTGTACAGCTGAGG+AGG | + | chr4.3:2686440-2686459 | MS.gene015800:CDS | 55.0% | |
| TAGAGATGGTGAGTCGGTGC+TGG | + | chr4.3:2682918-2682937 | MS.gene015800:CDS | 55.0% | |
| TATGGTTGCAGCGGAAGCCT+TGG | + | chr4.3:2686945-2686964 | MS.gene015800:intron | 55.0% | |
| TGCTGACAGTGGGAGGTAAG+AGG | - | chr4.3:2683733-2683752 | None:intergenic | 55.0% | |
| TGGCAAGCCTCACCAACAAC+CGG | - | chr4.3:2684123-2684142 | None:intergenic | 55.0% | |
| TGTCAGCAGCCAGCAACTTC+AGG | + | chr4.3:2683745-2683764 | MS.gene015800:CDS | 55.0% | |
| ! | AAGTTGCTGGCTGCTGACAG+TGG | - | chr4.3:2683744-2683763 | None:intergenic | 55.0% |
| ! | ACATTCCTCTTCCTCGGTGC+TGG | + | chr4.3:2685541-2685560 | MS.gene015800:CDS | 55.0% |
| ! | AGTTGCTGGCTGCTGACAGT+GGG | - | chr4.3:2683743-2683762 | None:intergenic | 55.0% |
| ! | GCAGCCCTGAAGTTGATTGG+TGG | + | chr4.3:2685502-2685521 | MS.gene015800:CDS | 55.0% |
| ! | GGCGGTGTTGAGGATGTCTA+CGG | + | chr4.3:2682967-2682986 | MS.gene015800:CDS | 55.0% |
| ! | GGTCGTGCGATTTTCGCTAG+TGG | + | chr4.3:2686585-2686604 | MS.gene015800:CDS | 55.0% |
| !! | TGTGGCCATGATGGACCTTC+AGG | + | chr4.3:2683919-2683938 | MS.gene015800:CDS | 55.0% |
| !!! | GGTGAGCGGATTTTGGGACT+CGG | + | chr4.3:2684360-2684379 | MS.gene015800:CDS | 55.0% |
| CTCGGTCACTTGCTTCGCCA+AGG | - | chr4.3:2686965-2686984 | None:intergenic | 60.0% | |
| CTTGGCGAAGCAAGTGACCG+AGG | + | chr4.3:2686963-2686982 | MS.gene015800:CDS | 60.0% | |
| GGCTCGTGTTCATGAGCCCA+AGG | - | chr4.3:2686081-2686100 | None:intergenic | 60.0% | |
| ! | CAGCTGAGGAGGCGTACACA+TGG | + | chr4.3:2686451-2686470 | MS.gene015800:CDS | 60.0% |
| ! | CTTCTCCAGCACCGAGGAAG+AGG | - | chr4.3:2685549-2685568 | None:intergenic | 60.0% |
| ! | GGAGGCGTACACATGGAGTG+AGG | + | chr4.3:2686458-2686477 | MS.gene015800:CDS | 60.0% |
| AGCCCAAGATCCGCCGTTGG+TGG | + | chr4.3:2682946-2682965 | MS.gene015800:CDS | 65.0% | |
| CAACGGCGGATCTTGGGCTG+AGG | - | chr4.3:2682945-2682964 | None:intergenic | 65.0% | |
| CGCCACCAACGGCGGATCTT+GGG | - | chr4.3:2682951-2682970 | None:intergenic | 65.0% | |
| CTCAACACCGCCACCAACGG+CGG | - | chr4.3:2682959-2682978 | None:intergenic | 65.0% | |
| CTCAGCCCAAGATCCGCCGT+TGG | + | chr4.3:2682943-2682962 | MS.gene015800:CDS | 65.0% | |
| ! | CCAAGATCCGCCGTTGGTGG+CGG | + | chr4.3:2682949-2682968 | MS.gene015800:CDS | 65.0% |
| ! | TGCTGGCTGCTGACAGTGGG+AGG | - | chr4.3:2683740-2683759 | None:intergenic | 65.0% |
| CCGCCACCAACGGCGGATCT+TGG | - | chr4.3:2682952-2682971 | None:intergenic | 70.0% | |
| !! | CGCCGTTGGTGGCGGTGTTG+AGG | + | chr4.3:2682957-2682976 | MS.gene015800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 2682895 | 2687321 | 2682895 | ID=MS.gene015800 |
| chr4.3 | mRNA | 2682895 | 2687321 | 2682895 | ID=MS.gene015800.t1;Parent=MS.gene015800 |
| chr4.3 | exon | 2682895 | 2683046 | 2682895 | ID=MS.gene015800.t1.exon1;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2682895 | 2683046 | 2682895 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2683646 | 2683766 | 2683646 | ID=MS.gene015800.t1.exon2;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2683646 | 2683766 | 2683646 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2683866 | 2683940 | 2683866 | ID=MS.gene015800.t1.exon3;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2683866 | 2683940 | 2683866 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2684048 | 2684199 | 2684048 | ID=MS.gene015800.t1.exon4;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2684048 | 2684199 | 2684048 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2684293 | 2684398 | 2684293 | ID=MS.gene015800.t1.exon5;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2684293 | 2684398 | 2684293 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2684752 | 2684817 | 2684752 | ID=MS.gene015800.t1.exon6;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2684752 | 2684817 | 2684752 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2684935 | 2685030 | 2684935 | ID=MS.gene015800.t1.exon7;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2684935 | 2685030 | 2684935 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2685146 | 2685217 | 2685146 | ID=MS.gene015800.t1.exon8;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2685146 | 2685217 | 2685146 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2685304 | 2685387 | 2685304 | ID=MS.gene015800.t1.exon9;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2685304 | 2685387 | 2685304 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2685469 | 2685567 | 2685469 | ID=MS.gene015800.t1.exon10;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2685469 | 2685567 | 2685469 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2685712 | 2685759 | 2685712 | ID=MS.gene015800.t1.exon11;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2685712 | 2685759 | 2685712 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2685869 | 2685922 | 2685869 | ID=MS.gene015800.t1.exon12;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2685869 | 2685922 | 2685869 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686030 | 2686128 | 2686030 | ID=MS.gene015800.t1.exon13;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686030 | 2686128 | 2686030 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686216 | 2686305 | 2686216 | ID=MS.gene015800.t1.exon14;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686216 | 2686305 | 2686216 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686402 | 2686479 | 2686402 | ID=MS.gene015800.t1.exon15;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686402 | 2686479 | 2686402 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686585 | 2686659 | 2686585 | ID=MS.gene015800.t1.exon16;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686585 | 2686659 | 2686585 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686742 | 2686832 | 2686742 | ID=MS.gene015800.t1.exon17;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686742 | 2686832 | 2686742 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2686956 | 2687084 | 2686956 | ID=MS.gene015800.t1.exon18;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2686956 | 2687084 | 2686956 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| chr4.3 | exon | 2687233 | 2687321 | 2687233 | ID=MS.gene015800.t1.exon19;Parent=MS.gene015800.t1 |
| chr4.3 | CDS | 2687233 | 2687321 | 2687233 | ID=cds.MS.gene015800.t1;Parent=MS.gene015800.t1 |
| Gene Sequence |
| Protein sequence |
