Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40704.t1 | XP_013462050.1 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1144.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40704.t1 | P12628 | 92.2 | 575 | 43 | 1 | 4 | 578 | 17 | 589 | 4.8e-310 | 1064.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40704.t1 | A0A072VD34 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1144.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58341 | MS.gene40704 | PPI |
| MS.gene40704 | MS.gene27680 | PPI |
| MS.gene40704 | MS.gene52200 | PPI |
| MS.gene40704 | MS.gene019525 | PPI |
| MS.gene40704 | MS.gene022694 | PPI |
| MS.gene40704 | MS.gene004152 | PPI |
| MS.gene40704 | MS.gene055729 | PPI |
| MS.gene40704 | MS.gene39348 | PPI |
| MS.gene40704 | MS.gene055730 | PPI |
| MS.gene40704 | MS.gene27682 | PPI |
| MS.gene08581 | MS.gene40704 | PPI |
| MS.gene40704 | MS.gene055731 | PPI |
| MS.gene40704 | MS.gene020057 | PPI |
| MS.gene40704 | MS.gene27681 | PPI |
| MS.gene40704 | MS.gene049858 | PPI |
| MS.gene40704 | MS.gene65276 | PPI |
| MS.gene40704 | MS.gene39666 | PPI |
| MS.gene40704 | MS.gene023832 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40704.t1 | MTR_3g110330 | 99.481 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1184 |
| MS.gene40704.t1 | MTR_8g102620 | 84.588 | 571 | 88 | 0 | 8 | 578 | 21 | 591 | 0.0 | 1011 |
| MS.gene40704.t1 | MTR_8g014390 | 81.371 | 569 | 106 | 0 | 10 | 578 | 20 | 588 | 0.0 | 972 |
| MS.gene40704.t1 | MTR_2g101040 | 81.514 | 568 | 105 | 0 | 11 | 578 | 108 | 675 | 0.0 | 970 |
| MS.gene40704.t1 | MTR_2g101040 | 77.852 | 596 | 104 | 1 | 11 | 578 | 74 | 669 | 0.0 | 956 |
| MS.gene40704.t1 | MTR_2g101040 | 81.541 | 558 | 103 | 0 | 11 | 568 | 74 | 631 | 0.0 | 951 |
| MS.gene40704.t1 | MTR_2g101040 | 81.667 | 540 | 99 | 0 | 11 | 550 | 74 | 613 | 0.0 | 918 |
| MS.gene40704.t1 | MTR_7g076650 | 41.725 | 568 | 296 | 9 | 39 | 574 | 30 | 594 | 6.59e-149 | 442 |
| MS.gene40704.t1 | MTR_8g032040 | 41.270 | 567 | 300 | 9 | 39 | 574 | 33 | 597 | 1.08e-147 | 439 |
| MS.gene40704.t1 | MTR_8g009500 | 42.004 | 569 | 292 | 11 | 42 | 574 | 54 | 620 | 2.81e-146 | 436 |
| MS.gene40704.t1 | MTR_7g076650 | 39.109 | 606 | 296 | 10 | 39 | 574 | 30 | 632 | 2.70e-141 | 424 |
| MS.gene40704.t1 | MTR_7g076650 | 43.788 | 491 | 253 | 7 | 39 | 508 | 30 | 518 | 1.72e-137 | 410 |
| MS.gene40704.t1 | MTR_8g009500 | 42.520 | 508 | 264 | 10 | 93 | 574 | 21 | 526 | 1.33e-132 | 398 |
| MS.gene40704.t1 | MTR_8g009500 | 42.667 | 450 | 231 | 8 | 42 | 466 | 54 | 501 | 1.79e-122 | 371 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40704.t1 | AT5G25880 | 84.238 | 571 | 90 | 0 | 8 | 578 | 18 | 588 | 0.0 | 1019 |
| MS.gene40704.t1 | AT5G11670 | 82.753 | 574 | 99 | 0 | 5 | 578 | 15 | 588 | 0.0 | 984 |
| MS.gene40704.t1 | AT5G25880 | 84.346 | 543 | 85 | 0 | 8 | 550 | 18 | 560 | 0.0 | 970 |
| MS.gene40704.t1 | AT1G79750 | 80.492 | 569 | 111 | 0 | 10 | 578 | 78 | 646 | 0.0 | 969 |
| MS.gene40704.t1 | AT2G19900 | 80.277 | 578 | 114 | 0 | 1 | 578 | 4 | 581 | 0.0 | 964 |
| MS.gene40704.t1 | AT2G19900 | 82.988 | 482 | 82 | 0 | 97 | 578 | 1 | 482 | 0.0 | 826 |
| MS.gene40704.t1 | AT5G25880 | 84.910 | 444 | 67 | 0 | 8 | 451 | 18 | 461 | 0.0 | 805 |
| MS.gene40704.t1 | AT4G00570 | 42.553 | 564 | 294 | 9 | 39 | 574 | 39 | 600 | 1.15e-150 | 446 |
| MS.gene40704.t1 | AT2G13560 | 43.106 | 573 | 286 | 12 | 39 | 574 | 46 | 615 | 3.17e-150 | 446 |
Find 119 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCCTCCAACTAATTTA+AGG | 0.155600 | 3.2:-88479733 | None:intergenic |
| TCATAATGCTTTCGATCTTC+TGG | 0.247214 | 3.2:+88479535 | MS.gene40704:CDS |
| CAGTTGCTCGCTTCTGTCTA+AGG | 0.286661 | 3.2:-88479218 | None:intergenic |
| GGTGGTGTTAAGGACCTTTA+TGG | 0.303206 | 3.2:+88477511 | MS.gene40704:CDS |
| GACCACACATTCTTATTCTT+AGG | 0.314902 | 3.2:+88479761 | MS.gene40704:CDS |
| CTTTCTCTCTATACTGCATT+AGG | 0.318484 | 3.2:+88478997 | MS.gene40704:CDS |
| CTTGCTTCCCTTAAATTAGT+TGG | 0.327881 | 3.2:+88479725 | MS.gene40704:CDS |
| GACTGATGGTGAGCGAATAT+TGG | 0.334124 | 3.2:+88478796 | MS.gene40704:CDS |
| CATAGCATTGATGGATCTTC+AGG | 0.341593 | 3.2:+88478386 | MS.gene40704:CDS |
| CATGCAGTTAAGCAGAACTA+TGG | 0.350006 | 3.2:+88479393 | MS.gene40704:CDS |
| CTTAGACAGAAGCGAGCAAC+TGG | 0.354222 | 3.2:+88479219 | MS.gene40704:CDS |
| TGTCTTCACTCAAGAGCTTC+AGG | 0.358072 | 3.2:+88478189 | MS.gene40704:CDS |
| GTGCCAACATCAATGGTTAT+AGG | 0.362681 | 3.2:-88479156 | None:intergenic |
| AGTTCCTCCAACTAATTTAA+GGG | 0.376258 | 3.2:-88479732 | None:intergenic |
| GATCAAACCCAAACCAAATC+CGG | 0.382208 | 3.2:-88481252 | None:intergenic |
| AGCTCTTGAGATTTCAAAAC+AGG | 0.383791 | 3.2:+88480095 | MS.gene40704:CDS |
| CAACGGTAGCTTCGATAGCC+TGG | 0.390240 | 3.2:-88481864 | None:intergenic |
| ATTTAAAACAGCTGAAGCTT+TGG | 0.390871 | 3.2:+88481570 | MS.gene40704:intron |
| TTCTTAGTTCTTACTGAAGA+AGG | 0.391345 | 3.2:-88479030 | None:intergenic |
| TCATATTCAACGGGATCAAA+TGG | 0.392063 | 3.2:-88481079 | None:intergenic |
| CCTTCACAGGTTCATGCTCA+TGG | 0.394386 | 3.2:-88480560 | None:intergenic |
| TCACAAGTACATAGCATTGA+TGG | 0.394588 | 3.2:+88478377 | MS.gene40704:CDS |
| GGTTTGGGTTTGATCATCTC+TGG | 0.424457 | 3.2:+88481260 | MS.gene40704:CDS |
| ATATTGGGACTAGGCGATCT+TGG | 0.426877 | 3.2:+88478812 | MS.gene40704:CDS |
| TGCACTCAGATTGTGAAGTT+GGG | 0.436411 | 3.2:-88480908 | None:intergenic |
| ATTGTTTGTGCCAACATCAA+TGG | 0.437244 | 3.2:-88479163 | None:intergenic |
| TGGTGTTGGTGGTGGTGTTA+AGG | 0.439696 | 3.2:+88477501 | MS.gene40704:CDS |
| GTGCACTCAGATTGTGAAGT+TGG | 0.441100 | 3.2:-88480909 | None:intergenic |
| TAGAGAGAAAGTTTCCCAAC+AGG | 0.441390 | 3.2:-88478985 | None:intergenic |
| ACATTCTTATTCTTAGGAGC+TGG | 0.443261 | 3.2:+88479767 | MS.gene40704:CDS |
| TGGCTATTGAAGGCTGGAAC+TGG | 0.448999 | 3.2:+88480057 | MS.gene40704:intron |
| TGACAGGCTTCTCCAACTGT+TGG | 0.449408 | 3.2:-88478572 | None:intergenic |
| TTTGTGAATGGTGTTGGTGG+TGG | 0.450515 | 3.2:+88477493 | MS.gene40704:CDS |
| AAATTTCCTTCATATTCAAC+GGG | 0.451008 | 3.2:-88481088 | None:intergenic |
| ATCTCTTTCTTTCTCAGTGA+AGG | 0.452812 | 3.2:-88478134 | None:intergenic |
| AAGCATTTATAGGCGTCCTC+AGG | 0.456871 | 3.2:+88478604 | MS.gene40704:CDS |
| ATCTTTCTGATATTTGTGAA+TGG | 0.469748 | 3.2:-88481640 | None:intergenic |
| TTTGATCCCGTTGAATATGA+AGG | 0.472314 | 3.2:+88481082 | MS.gene40704:CDS |
| AAAATTTCCTTCATATTCAA+CGG | 0.476871 | 3.2:-88481089 | None:intergenic |
| CTTCACAGGTTCATGCTCAT+GGG | 0.481605 | 3.2:-88480559 | None:intergenic |
| GTATGAATGTACCTCATTCA+AGG | 0.487503 | 3.2:-88480782 | None:intergenic |
| ACTGATGGTGAGCGAATATT+GGG | 0.489006 | 3.2:+88478797 | MS.gene40704:CDS |
| TGAAGACAGCAGGAGGCAAA+AGG | 0.489689 | 3.2:-88478174 | None:intergenic |
| AAGATCGAAAGCATTATGAT+TGG | 0.489691 | 3.2:-88479531 | None:intergenic |
| TCACAGGAGAACTATGATAA+GGG | 0.491757 | 3.2:+88481604 | MS.gene40704:CDS |
| TCTTAGTTCTTACTGAAGAA+GGG | 0.494272 | 3.2:-88479029 | None:intergenic |
| ATCACAGGAGAACTATGATA+AGG | 0.496010 | 3.2:+88481603 | MS.gene40704:CDS |
| CATGGCTTCAACAACCTCCT+TGG | 0.497775 | 3.2:-88480755 | None:intergenic |
| ACTAGGCGATCTTGGTTGCC+AGG | 0.500190 | 3.2:+88478820 | MS.gene40704:CDS |
| TTCTGATATTTGTGAATGGA+GGG | 0.500345 | 3.2:-88481636 | None:intergenic |
| TAGCACTATCCTCACCATAA+AGG | 0.502501 | 3.2:-88477525 | None:intergenic |
| CAAGTTATTGTTGTGACTGA+TGG | 0.504528 | 3.2:+88478782 | MS.gene40704:CDS |
| AGAGATGCTCATTATGTTCG+TGG | 0.504930 | 3.2:+88478151 | MS.gene40704:CDS |
| CATATTCAACGGGATCAAAT+GGG | 0.505094 | 3.2:-88481078 | None:intergenic |
| TTTCTGATATTTGTGAATGG+AGG | 0.505110 | 3.2:-88481637 | None:intergenic |
| GGGTCTGTATATAAGTTTGA+AGG | 0.508087 | 3.2:+88478625 | MS.gene40704:CDS |
| ACTGTTGGAGTGTAAACAAC+AGG | 0.510690 | 3.2:-88478557 | None:intergenic |
| TGCAACACTAGCAGCAATGT+TGG | 0.511102 | 3.2:-88481668 | None:intergenic |
| CTCAGATTGTGAAGTTGGGT+TGG | 0.511133 | 3.2:-88480904 | None:intergenic |
| GCATTTAGAAGCTCCTTCAC+AGG | 0.511432 | 3.2:-88480573 | None:intergenic |
| ACAGCATCTGTGGTATTAGC+AGG | 0.511802 | 3.2:+88479698 | MS.gene40704:CDS |
| GCTTCCCTTAAATTAGTTGG+AGG | 0.512303 | 3.2:+88479728 | MS.gene40704:CDS |
| TTGATTGGATCATCTGGAGT+AGG | 0.520374 | 3.2:+88480721 | MS.gene40704:CDS |
| TATTGAATTAAAACCTGTCC+AGG | 0.521440 | 3.2:-88481118 | None:intergenic |
| AGGGCATGGGAATTCCTGTT+GGG | 0.523574 | 3.2:+88478971 | MS.gene40704:intron |
| ATGCAGTTAAGCAGAACTAT+GGG | 0.523707 | 3.2:+88479394 | MS.gene40704:CDS |
| AGCTCTTGAGTGAAGACAGC+AGG | 0.526320 | 3.2:-88478184 | None:intergenic |
| TGGGGAGAAAGTTCTTGTAC+AGG | 0.528324 | 3.2:+88479413 | MS.gene40704:CDS |
| CTTATTCTTAGGAGCTGGAG+AGG | 0.528375 | 3.2:+88479772 | MS.gene40704:CDS |
| CATGGAATTTCTCTGTTGCT+AGG | 0.532825 | 3.2:+88477569 | MS.gene40704:CDS |
| TTTACAAGATCCTTTGGTCG+AGG | 0.533764 | 3.2:-88481816 | None:intergenic |
| CAAGGAGGTTGTTGAAGCCA+TGG | 0.536270 | 3.2:+88480756 | MS.gene40704:CDS |
| CAGCAGAAGAAGCTTATACA+TGG | 0.536860 | 3.2:+88480931 | MS.gene40704:CDS |
| TAGGGCATGGGAATTCCTGT+TGG | 0.538702 | 3.2:+88478970 | MS.gene40704:intron |
| CTGAATGATGAATTCTACAT+TGG | 0.540227 | 3.2:+88479195 | MS.gene40704:CDS |
| TCCAGATGATCCAATCAAAA+CGG | 0.543485 | 3.2:-88480716 | None:intergenic |
| AACGGTAGCTTCGATAGCCT+GGG | 0.544790 | 3.2:-88481863 | None:intergenic |
| ATCAAACCCAAACCAAATCC+GGG | 0.548446 | 3.2:-88481251 | None:intergenic |
| TTTGGCTGCACAAGTATCAC+AGG | 0.550062 | 3.2:+88481588 | MS.gene40704:CDS |
| TGTGAAGAGGAACATCATAC+TGG | 0.551543 | 3.2:-88478359 | None:intergenic |
| CGTGCGTGATGAGATGCTCT+TGG | 0.552173 | 3.2:+88481292 | MS.gene40704:CDS |
| TTCTCATTTACCTCGACCAA+AGG | 0.555074 | 3.2:+88481806 | MS.gene40704:CDS |
| GTTGTTTACACTCCAACAGT+TGG | 0.556691 | 3.2:+88478560 | MS.gene40704:CDS |
| GCAGCTAAGACATACGAACT+TGG | 0.559765 | 3.2:+88481688 | MS.gene40704:CDS |
| GGTGAGCGAATATTGGGACT+AGG | 0.569263 | 3.2:+88478803 | MS.gene40704:CDS |
| GATCTGGCTTGTGGACTCCA+AGG | 0.572426 | 3.2:+88480233 | MS.gene40704:CDS |
| ATTTACAGGAGAGGAATGAA+AGG | 0.576916 | 3.2:+88478492 | MS.gene40704:intron |
| GGTTCATGCTCATGGGCCCA+AGG | 0.579706 | 3.2:-88480552 | None:intergenic |
| TACCTCATTCAAGGATGCCA+TGG | 0.579790 | 3.2:-88480773 | None:intergenic |
| CCATGAGCATGAACCTGTGA+AGG | 0.581900 | 3.2:+88480560 | MS.gene40704:CDS |
| GAAAGTTGCATGTACAGCCC+AGG | 0.582833 | 3.2:+88481846 | MS.gene40704:CDS |
| GCAAGTCCTTTGTTGTAGCG+TGG | 0.583550 | 3.2:-88478112 | None:intergenic |
| GATGATCCAATCAAAACGGT+TGG | 0.584702 | 3.2:-88480712 | None:intergenic |
| AGAGATCCACGCTACAACAA+AGG | 0.591569 | 3.2:+88478106 | MS.gene40704:CDS |
| AATTCAGGGTACAGCATCTG+TGG | 0.592279 | 3.2:+88479688 | MS.gene40704:intron |
| TAGCTTAGACATGGCAACTG+AGG | 0.593293 | 3.2:+88477468 | None:intergenic |
| AATGCTATGTACTTGTGAAG+AGG | 0.595015 | 3.2:-88478372 | None:intergenic |
| CTCCTAAGAATAAGAATGTG+TGG | 0.596180 | 3.2:-88479763 | None:intergenic |
| TCTCTCTATACTGCATTAGG+AGG | 0.598664 | 3.2:+88479000 | MS.gene40704:CDS |
| GGAGCTTCTAAATGCTGTCA+AGG | 0.601373 | 3.2:+88480581 | MS.gene40704:CDS |
| TATTGTGGTTTAGGAATATG+CGG | 0.601391 | 3.2:+88479350 | MS.gene40704:intron |
| AGCATTTATAGGCGTCCTCA+GGG | 0.601908 | 3.2:+88478605 | MS.gene40704:CDS |
| TTGCCTATAACCATTGATGT+TGG | 0.615107 | 3.2:+88479153 | MS.gene40704:CDS |
| TGTTAAGGACCTTTATGGTG+AGG | 0.622545 | 3.2:+88477516 | MS.gene40704:CDS |
| CTAGCAACAGAGAAATTCCA+TGG | 0.627315 | 3.2:-88477568 | None:intergenic |
| AGCCATGGCATCCTTGAATG+AGG | 0.632620 | 3.2:+88480771 | MS.gene40704:CDS |
| AGAAGCTTATACATGGAGCA+AGG | 0.633567 | 3.2:+88480938 | MS.gene40704:CDS |
| TTTCAGAGGCAAAATCCTTG+AGG | 0.635790 | 3.2:+88478730 | MS.gene40704:intron |
| TCTTGAGTGAAGACAGCAGG+AGG | 0.639397 | 3.2:-88478181 | None:intergenic |
| TTGGAAAGTGCAAGAATGAG+TGG | 0.647457 | 3.2:-88480885 | None:intergenic |
| ACAGAAGCGAGCAACTGGGA+AGG | 0.653659 | 3.2:+88479224 | MS.gene40704:CDS |
| TGGTGAGGATAGTGCTACAG+AGG | 0.659781 | 3.2:+88477531 | MS.gene40704:CDS |
| AGGATCAACTTATCACACCA+TGG | 0.678592 | 3.2:+88477551 | MS.gene40704:CDS |
| AGGAAAGACATTTACCAAGG+AGG | 0.680892 | 3.2:+88480741 | MS.gene40704:CDS |
| AGAGCATCTCATCACGCACG+CGG | 0.683022 | 3.2:-88481289 | None:intergenic |
| TTAGACAGAAGCGAGCAACT+GGG | 0.694021 | 3.2:+88479220 | MS.gene40704:CDS |
| TGCAGTTAAGCAGAACTATG+GGG | 0.709877 | 3.2:+88479395 | MS.gene40704:CDS |
| AGTAGGAAAGACATTTACCA+AGG | 0.712377 | 3.2:+88480738 | MS.gene40704:CDS |
| AAACTTATATACAGACCCTG+AGG | 0.760636 | 3.2:-88478620 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTTATTTACATTCT+TGG | + | chr3.2:88478280-88478299 | MS.gene40704:intron | 10.0% |
| !! | ATATTTGATCAATTAATAAA+TGG | + | chr3.2:88479101-88479120 | MS.gene40704:intron | 10.0% |
| !! | TCATTAAATTATACATAATT+TGG | - | chr3.2:88477933-88477952 | None:intergenic | 10.0% |
| !!! | CTGTTTTAAATAAAATAAAA+TGG | - | chr3.2:88481561-88481580 | None:intergenic | 10.0% |
| !!! | TAAATTAAATACTATCTTTT+TGG | + | chr3.2:88480174-88480193 | MS.gene40704:intron | 10.0% |
| !! | AAAAAAGGAATTATAAAATC+AGG | - | chr3.2:88479495-88479514 | None:intergenic | 15.0% |
| !! | AGATAATCAAGTTAATATAA+AGG | - | chr3.2:88478937-88478956 | None:intergenic | 15.0% |
| !! | GTTATTATTATGTTACATTA+TGG | - | chr3.2:88478248-88478267 | None:intergenic | 15.0% |
| !! | TTAATAAATGGTTTACTATT+TGG | + | chr3.2:88479113-88479132 | MS.gene40704:intron | 15.0% |
| !! | TTATTAATTGATCAAATATG+TGG | - | chr3.2:88479100-88479119 | None:intergenic | 15.0% |
| !!! | TATCTTCAATAATTTTGTTA+GGG | + | chr3.2:88478952-88478971 | MS.gene40704:intron | 15.0% |
| !!! | TTATCTTCAATAATTTTGTT+AGG | + | chr3.2:88478951-88478970 | MS.gene40704:intron | 15.0% |
| !!! | TTTAATGAAAGCATTAATTT+TGG | + | chr3.2:88477945-88477964 | MS.gene40704:intron | 15.0% |
| !! | AAAATAAGAGTCAATAACAT+GGG | - | chr3.2:88479659-88479678 | None:intergenic | 20.0% |
| !! | AAAATCTTCAAACTGAAAAA+AGG | - | chr3.2:88479510-88479529 | None:intergenic | 20.0% |
| !! | AAAATTTCCTTCATATTCAA+CGG | - | chr3.2:88481092-88481111 | None:intergenic | 20.0% |
| !! | AGTCGTTAATTATTATTTCA+TGG | + | chr3.2:88478029-88478048 | MS.gene40704:intron | 20.0% |
| !! | AGTTAATATAAAGGTTTAAC+TGG | - | chr3.2:88478928-88478947 | None:intergenic | 20.0% |
| !! | ATAAGTTTAATGACAAATGA+GGG | + | chr3.2:88477854-88477873 | MS.gene40704:intron | 20.0% |
| !! | TATAAGTTTAATGACAAATG+AGG | + | chr3.2:88477853-88477872 | MS.gene40704:intron | 20.0% |
| !! | TTATCAAATTATTACTAGTG+TGG | - | chr3.2:88479920-88479939 | None:intergenic | 20.0% |
| !!! | AAAAATATGGAAGCATTTAT+AGG | + | chr3.2:88478594-88478613 | MS.gene40704:CDS | 20.0% |
| !!! | AATTTCTTACTACTATCTTT+TGG | + | chr3.2:88480037-88480056 | MS.gene40704:intron | 20.0% |
| !!! | AGATTTAATGTGTTTGTTAA+TGG | + | chr3.2:88477828-88477847 | MS.gene40704:intron | 20.0% |
| !!! | ATTTTCTTTGGTTTAATTCA+GGG | + | chr3.2:88479674-88479693 | MS.gene40704:intron | 20.0% |
| !!! | CTTTGACATTTTTTATTTAC+AGG | + | chr3.2:88478478-88478497 | MS.gene40704:intron | 20.0% |
| !!! | TATTTTCTTTGGTTTAATTC+AGG | + | chr3.2:88479673-88479692 | MS.gene40704:intron | 20.0% |
| !!! | TTAATTTTGTTACAGTATCA+AGG | + | chr3.2:88481376-88481395 | MS.gene40704:intron | 20.0% |
| !!! | TTATTGACTCTTATTTTCTT+TGG | + | chr3.2:88479662-88479681 | MS.gene40704:intron | 20.0% |
| ! | AAACAGAGAAGACAAAATTA+AGG | - | chr3.2:88481770-88481789 | None:intergenic | 25.0% |
| ! | AAATTTCCTTCATATTCAAC+GGG | - | chr3.2:88481091-88481110 | None:intergenic | 25.0% |
| ! | AACAACTTACGAACTAATTA+TGG | + | chr3.2:88477648-88477667 | MS.gene40704:intron | 25.0% |
| ! | AACATAGTGTTTGTTTATTG+TGG | + | chr3.2:88479335-88479354 | MS.gene40704:intron | 25.0% |
| ! | ATCTTTCTGATATTTGTGAA+TGG | - | chr3.2:88481643-88481662 | None:intergenic | 25.0% |
| ! | ATGGAATCAATTGTGAAATA+TGG | - | chr3.2:88480680-88480699 | None:intergenic | 25.0% |
| ! | CTAAGCTAACAAACAAAATA+GGG | - | chr3.2:88478676-88478695 | None:intergenic | 25.0% |
| ! | CTAATGATATAATCTCTCAA+TGG | - | chr3.2:88481335-88481354 | None:intergenic | 25.0% |
| ! | GAAAATAAGAGTCAATAACA+TGG | - | chr3.2:88479660-88479679 | None:intergenic | 25.0% |
| ! | GCAAATATCTTATGAGATTA+TGG | - | chr3.2:88480474-88480493 | None:intergenic | 25.0% |
| ! | GTAATTAAATCATCATACCA+TGG | + | chr3.2:88478842-88478861 | MS.gene40704:intron | 25.0% |
| ! | TAATATTCGACATCATTATC+AGG | - | chr3.2:88477886-88477905 | None:intergenic | 25.0% |
| ! | TAATGATGTCGAATATTATC+TGG | + | chr3.2:88477888-88477907 | MS.gene40704:intron | 25.0% |
| ! | TAATTGATCAAATATGTGGA+AGG | - | chr3.2:88479096-88479115 | None:intergenic | 25.0% |
| ! | TCTAGTATTACAATTCTAGA+TGG | + | chr3.2:88480273-88480292 | MS.gene40704:intron | 25.0% |
| ! | TGAATTGAACACATTTAACA+TGG | - | chr3.2:88481721-88481740 | None:intergenic | 25.0% |
| ! | TTGAATGTAACTACATATCT+TGG | + | chr3.2:88479950-88479969 | MS.gene40704:intron | 25.0% |
| !! | ATAACTTGAATAGTCTTTTC+TGG | - | chr3.2:88478770-88478789 | None:intergenic | 25.0% |
| !! | TGTTTTCAATGATGATATAC+AGG | + | chr3.2:88479580-88479599 | MS.gene40704:CDS | 25.0% |
| !! | TTAAAGTCAGTCACTAATTT+TGG | - | chr3.2:88481182-88481201 | None:intergenic | 25.0% |
| !! | TTAATTTTGTCTTCTCTGTT+TGG | + | chr3.2:88481769-88481788 | MS.gene40704:intron | 25.0% |
| !!! | AAAGCATTAATTTTGGCTAA+TGG | + | chr3.2:88477952-88477971 | MS.gene40704:intron | 25.0% |
| !!! | AAGTACTTGAATTTTTTCAG+AGG | + | chr3.2:88478716-88478735 | MS.gene40704:intron | 25.0% |
| !!! | ACATTTTTTATTTACAGGAG+AGG | + | chr3.2:88478483-88478502 | MS.gene40704:intron | 25.0% |
| !!! | GTTGTTATTTATGTGTTTTC+AGG | + | chr3.2:88478311-88478330 | MS.gene40704:intron | 25.0% |
| !!! | TAACTAAATTAGTCTTCCTT+AGG | - | chr3.2:88479804-88479823 | None:intergenic | 25.0% |
| AAACATCATGGTGCAAAAAA+AGG | - | chr3.2:88479296-88479315 | None:intergenic | 30.0% | |
| AAGATATTTGCTCTATTGCA+GGG | + | chr3.2:88480483-88480502 | MS.gene40704:intron | 30.0% | |
| AAGCATAAATGCAAAAAGTG+AGG | - | chr3.2:88479839-88479858 | None:intergenic | 30.0% | |
| AAGTTCCTCCAACTAATTTA+AGG | - | chr3.2:88479736-88479755 | None:intergenic | 30.0% | |
| ACCACAATAAACAAACATCA+TGG | - | chr3.2:88479308-88479327 | None:intergenic | 30.0% | |
| ACCATGATGTTTGTTTATTG+TGG | + | chr3.2:88479304-88479323 | MS.gene40704:intron | 30.0% | |
| AGTTCCTCCAACTAATTTAA+GGG | - | chr3.2:88479735-88479754 | None:intergenic | 30.0% | |
| ATCGTCAAAACAAACAAACA+GGG | - | chr3.2:88477742-88477761 | None:intergenic | 30.0% | |
| CAATGTAATGTGACGTAATT+AGG | - | chr3.2:88477611-88477630 | None:intergenic | 30.0% | |
| CACATAAATAACAACGAAGT+TGG | - | chr3.2:88478306-88478325 | None:intergenic | 30.0% | |
| CCTTTATATCCAAGAAAACA+CGG | + | chr3.2:88478896-88478915 | MS.gene40704:intron | 30.0% | |
| CTAATGTTTGTGACATTTCT+TGG | + | chr3.2:88480847-88480866 | MS.gene40704:intron | 30.0% | |
| CTGAATGATGAATTCTACAT+TGG | + | chr3.2:88479195-88479214 | MS.gene40704:CDS | 30.0% | |
| GCTAAGCTAACAAACAAAAT+AGG | - | chr3.2:88478677-88478696 | None:intergenic | 30.0% | |
| GGTATGATGATTTAATTACC+TGG | - | chr3.2:88478841-88478860 | None:intergenic | 30.0% | |
| GTGTTTGTTTATTGTGGTTT+AGG | + | chr3.2:88479341-88479360 | MS.gene40704:intron | 30.0% | |
| TAAGATATTTGCTCTATTGC+AGG | + | chr3.2:88480482-88480501 | MS.gene40704:intron | 30.0% | |
| TAATAATGACTGTGTTACAG+TGG | + | chr3.2:88478070-88478089 | MS.gene40704:intron | 30.0% | |
| TAATTCCGATCAAAGATGAA+GGG | + | chr3.2:88480432-88480451 | MS.gene40704:intron | 30.0% | |
| TATTGAATTAAAACCTGTCC+AGG | - | chr3.2:88481121-88481140 | None:intergenic | 30.0% | |
| TATTGTGGTTTAGGAATATG+CGG | + | chr3.2:88479350-88479369 | MS.gene40704:intron | 30.0% | |
| TCAATGATGATATACAGGTA+AGG | + | chr3.2:88479585-88479604 | MS.gene40704:intron | 30.0% | |
| TCTTTGTACAATGTGCAATT+TGG | + | chr3.2:88477709-88477728 | MS.gene40704:intron | 30.0% | |
| TGAACAATTCATCTGTTTCA+TGG | + | chr3.2:88477798-88477817 | MS.gene40704:intron | 30.0% | |
| TTCTGATATTTGTGAATGGA+GGG | - | chr3.2:88481639-88481658 | None:intergenic | 30.0% | |
| TTTCTGATATTTGTGAATGG+AGG | - | chr3.2:88481640-88481659 | None:intergenic | 30.0% | |
| ! | AACAATGCTTACATTTTTCC+CGG | + | chr3.2:88481233-88481252 | MS.gene40704:CDS | 30.0% |
| ! | AATTGTGTGTTGTTAAGACA+TGG | + | chr3.2:88481517-88481536 | MS.gene40704:intron | 30.0% |
| ! | ATGATTTTCGTGCATCATTA+TGG | + | chr3.2:88477991-88478010 | MS.gene40704:intron | 30.0% |
| ! | ATTTAAAACAGCTGAAGCTT+TGG | + | chr3.2:88481570-88481589 | MS.gene40704:intron | 30.0% |
| ! | ATTTCACAATTGATTCCATC+AGG | + | chr3.2:88480681-88480700 | MS.gene40704:intron | 30.0% |
| ! | ATTTTGTCTCTTCTATTTGC+AGG | + | chr3.2:88481030-88481049 | MS.gene40704:intron | 30.0% |
| ! | CAATAATTTTGTTAGGGCAT+GGG | + | chr3.2:88478958-88478977 | MS.gene40704:intron | 30.0% |
| ! | TCAATAATTTTGTTAGGGCA+TGG | + | chr3.2:88478957-88478976 | MS.gene40704:intron | 30.0% |
| ! | TCTTAGTTCTTACTGAAGAA+GGG | - | chr3.2:88479032-88479051 | None:intergenic | 30.0% |
| ! | TTCTTAGTTCTTACTGAAGA+AGG | - | chr3.2:88479033-88479052 | None:intergenic | 30.0% |
| ! | TTTTGTCTCTTCTATTTGCA+GGG | + | chr3.2:88481031-88481050 | MS.gene40704:intron | 30.0% |
| !! | AAGATCGAAAGCATTATGAT+TGG | - | chr3.2:88479534-88479553 | None:intergenic | 30.0% |
| !! | AATGCTTCCATATTTTTGAC+AGG | - | chr3.2:88478591-88478610 | None:intergenic | 30.0% |
| !! | TACTATCTTTTGGCTATTGA+AGG | + | chr3.2:88480047-88480066 | MS.gene40704:intron | 30.0% |
| !! | TTATGTGTTTTCAGGAAAAG+AGG | + | chr3.2:88478319-88478338 | MS.gene40704:intron | 30.0% |
| !!! | AAATTTTTTTGTTCCTGGAC+AGG | + | chr3.2:88481105-88481124 | MS.gene40704:CDS | 30.0% |
| !!! | GAAGGAAATTTTTTTGTTCC+TGG | + | chr3.2:88481100-88481119 | MS.gene40704:CDS | 30.0% |
| AAACTTATATACAGACCCTG+AGG | - | chr3.2:88478623-88478642 | None:intergenic | 35.0% | |
| AATGCTATGTACTTGTGAAG+AGG | - | chr3.2:88478375-88478394 | None:intergenic | 35.0% | |
| ACATTCTTATTCTTAGGAGC+TGG | + | chr3.2:88479767-88479786 | MS.gene40704:CDS | 35.0% | |
| AGCTCTTGAGATTTCAAAAC+AGG | + | chr3.2:88480095-88480114 | MS.gene40704:CDS | 35.0% | |
| AGTAGGAAAGACATTTACCA+AGG | + | chr3.2:88480738-88480757 | MS.gene40704:CDS | 35.0% | |
| ATCACAGGAGAACTATGATA+AGG | + | chr3.2:88481603-88481622 | MS.gene40704:CDS | 35.0% | |
| ATCTCTTTCTTTCTCAGTGA+AGG | - | chr3.2:88478137-88478156 | None:intergenic | 35.0% | |
| ATGCAGTTAAGCAGAACTAT+GGG | + | chr3.2:88479394-88479413 | MS.gene40704:CDS | 35.0% | |
| ATGTCAAAGACAGTGAGAAA+AGG | - | chr3.2:88478467-88478486 | None:intergenic | 35.0% | |
| ATTGTTTGTGCCAACATCAA+TGG | - | chr3.2:88479166-88479185 | None:intergenic | 35.0% | |
| ATTTACAGGAGAGGAATGAA+AGG | + | chr3.2:88478492-88478511 | MS.gene40704:intron | 35.0% | |
| CAAGTTATTGTTGTGACTGA+TGG | + | chr3.2:88478782-88478801 | MS.gene40704:CDS | 35.0% | |
| CATATTCAACGGGATCAAAT+GGG | - | chr3.2:88481081-88481100 | None:intergenic | 35.0% | |
| CTCCTAAGAATAAGAATGTG+TGG | - | chr3.2:88479766-88479785 | None:intergenic | 35.0% | |
| CTTGCTTCCCTTAAATTAGT+TGG | + | chr3.2:88479725-88479744 | MS.gene40704:CDS | 35.0% | |
| CTTTCTCTCTATACTGCATT+AGG | + | chr3.2:88478997-88479016 | MS.gene40704:CDS | 35.0% | |
| GACCACACATTCTTATTCTT+AGG | + | chr3.2:88479761-88479780 | MS.gene40704:CDS | 35.0% | |
| GATCGTCAAAACAAACAAAC+AGG | - | chr3.2:88477743-88477762 | None:intergenic | 35.0% | |
| GGGTCTGTATATAAGTTTGA+AGG | + | chr3.2:88478625-88478644 | MS.gene40704:CDS | 35.0% | |
| GTAATTCCGATCAAAGATGA+AGG | + | chr3.2:88480431-88480450 | MS.gene40704:intron | 35.0% | |
| GTATGAATGTACCTCATTCA+AGG | - | chr3.2:88480785-88480804 | None:intergenic | 35.0% | |
| TAACTACATATCTTGGACAC+TGG | + | chr3.2:88479957-88479976 | MS.gene40704:intron | 35.0% | |
| TCAACACTTCAAAAAGCCTT+GGG | + | chr3.2:88480536-88480555 | MS.gene40704:CDS | 35.0% | |
| TCACAGGAGAACTATGATAA+GGG | + | chr3.2:88481604-88481623 | MS.gene40704:CDS | 35.0% | |
| TCATAATGCTTTCGATCTTC+TGG | + | chr3.2:88479535-88479554 | MS.gene40704:CDS | 35.0% | |
| TCATATTCAACGGGATCAAA+TGG | - | chr3.2:88481082-88481101 | None:intergenic | 35.0% | |
| TCCAGATGATCCAATCAAAA+CGG | - | chr3.2:88480719-88480738 | None:intergenic | 35.0% | |
| TCGACATCATTATCAGGATT+CGG | - | chr3.2:88477880-88477899 | None:intergenic | 35.0% | |
| TGGATGTGTTAGTATCAGTA+TGG | - | chr3.2:88479900-88479919 | None:intergenic | 35.0% | |
| TTCAACACTTCAAAAAGCCT+TGG | + | chr3.2:88480535-88480554 | MS.gene40704:CDS | 35.0% | |
| TTCAACATCTTCAGTGTCTT+TGG | + | chr3.2:88479448-88479467 | MS.gene40704:intron | 35.0% | |
| TTGCCTATAACCATTGATGT+TGG | + | chr3.2:88479153-88479172 | MS.gene40704:CDS | 35.0% | |
| TTTGATCCCGTTGAATATGA+AGG | + | chr3.2:88481082-88481101 | MS.gene40704:CDS | 35.0% | |
| ! | CAGTTCAAGCATTTTTACCT+TGG | - | chr3.2:88480253-88480272 | None:intergenic | 35.0% |
| ! | CCGTGTTTTCTTGGATATAA+AGG | - | chr3.2:88478899-88478918 | None:intergenic | 35.0% |
| ! | GCGTATTTTACAAGATCCTT+TGG | - | chr3.2:88481825-88481844 | None:intergenic | 35.0% |
| ! | GGGAAAAATGTAAGCATTGT+TGG | - | chr3.2:88481234-88481253 | None:intergenic | 35.0% |
| ! | GTTTTGCTGCAATGCAATTT+AGG | + | chr3.2:88481208-88481227 | MS.gene40704:intron | 35.0% |
| ! | TCACAAGTACATAGCATTGA+TGG | + | chr3.2:88478377-88478396 | MS.gene40704:CDS | 35.0% |
| !! | ATTTTTCCCGGATTTGGTTT+GGG | + | chr3.2:88481245-88481264 | MS.gene40704:CDS | 35.0% |
| !!! | AAGGCTTTTTGAAGTGTTGA+AGG | - | chr3.2:88480536-88480555 | None:intergenic | 35.0% |
| !!! | AGGCTTTTTGAAGTGTTGAA+GGG | - | chr3.2:88480535-88480554 | None:intergenic | 35.0% |
| !!! | GCATCTGTAGTTTTAAACCA+TGG | - | chr3.2:88478862-88478881 | None:intergenic | 35.0% |
| AAGAGACTCGCAAAAAGATC+TGG | + | chr3.2:88480217-88480236 | MS.gene40704:CDS | 40.0% | |
| ACAATTCTAGATGGAAGTCG+TGG | + | chr3.2:88480282-88480301 | MS.gene40704:intron | 40.0% | |
| ACTGTTGGAGTGTAAACAAC+AGG | - | chr3.2:88478560-88478579 | None:intergenic | 40.0% | |
| AGAAGCTTATACATGGAGCA+AGG | + | chr3.2:88480938-88480957 | MS.gene40704:CDS | 40.0% | |
| AGAGATGCTCATTATGTTCG+TGG | + | chr3.2:88478151-88478170 | MS.gene40704:CDS | 40.0% | |
| AGGAAAGACATTTACCAAGG+AGG | + | chr3.2:88480741-88480760 | MS.gene40704:CDS | 40.0% | |
| AGGATCAACTTATCACACCA+TGG | + | chr3.2:88477551-88477570 | MS.gene40704:CDS | 40.0% | |
| ATCAAACCCAAACCAAATCC+GGG | - | chr3.2:88481254-88481273 | None:intergenic | 40.0% | |
| ATCAAATATGTGGAAGGCGA+AGG | - | chr3.2:88479090-88479109 | None:intergenic | 40.0% | |
| CAGCAGAAGAAGCTTATACA+TGG | + | chr3.2:88480931-88480950 | MS.gene40704:CDS | 40.0% | |
| CATGCAGTTAAGCAGAACTA+TGG | + | chr3.2:88479393-88479412 | MS.gene40704:CDS | 40.0% | |
| CATGGAATTTCTCTGTTGCT+AGG | + | chr3.2:88477569-88477588 | MS.gene40704:CDS | 40.0% | |
| CTAGCAACAGAGAAATTCCA+TGG | - | chr3.2:88477571-88477590 | None:intergenic | 40.0% | |
| GATCAAACCCAAACCAAATC+CGG | - | chr3.2:88481255-88481274 | None:intergenic | 40.0% | |
| GATGATCCAATCAAAACGGT+TGG | - | chr3.2:88480715-88480734 | None:intergenic | 40.0% | |
| GCTTCCCTTAAATTAGTTGG+AGG | + | chr3.2:88479728-88479747 | MS.gene40704:CDS | 40.0% | |
| GGAGAAGCCTGTCAAAAATA+TGG | + | chr3.2:88478581-88478600 | MS.gene40704:CDS | 40.0% | |
| GTGCCAACATCAATGGTTAT+AGG | - | chr3.2:88479159-88479178 | None:intergenic | 40.0% | |
| GTTAGTATCAGTATGGTGTC+CGG | - | chr3.2:88479893-88479912 | None:intergenic | 40.0% | |
| GTTGTTTACACTCCAACAGT+TGG | + | chr3.2:88478560-88478579 | MS.gene40704:CDS | 40.0% | |
| TAGAGAGAAAGTTTCCCAAC+AGG | - | chr3.2:88478988-88479007 | None:intergenic | 40.0% | |
| TAGCACTATCCTCACCATAA+AGG | - | chr3.2:88477528-88477547 | None:intergenic | 40.0% | |
| TCTCAATGGCATGTACTTAC+AGG | - | chr3.2:88481321-88481340 | None:intergenic | 40.0% | |
| TCTCTCTATACTGCATTAGG+AGG | + | chr3.2:88479000-88479019 | MS.gene40704:CDS | 40.0% | |
| TGCACTCAGATTGTGAAGTT+GGG | - | chr3.2:88480911-88480930 | None:intergenic | 40.0% | |
| TGCAGTTAAGCAGAACTATG+GGG | + | chr3.2:88479395-88479414 | MS.gene40704:CDS | 40.0% | |
| TGTGAAGAGGAACATCATAC+TGG | - | chr3.2:88478362-88478381 | None:intergenic | 40.0% | |
| TGTTAAGGACCTTTATGGTG+AGG | + | chr3.2:88477516-88477535 | MS.gene40704:CDS | 40.0% | |
| TTCTCATTTACCTCGACCAA+AGG | + | chr3.2:88481806-88481825 | MS.gene40704:CDS | 40.0% | |
| TTGTGCCCTTCATCTTTGAT+CGG | - | chr3.2:88480440-88480459 | None:intergenic | 40.0% | |
| TTTACAAGATCCTTTGGTCG+AGG | - | chr3.2:88481819-88481838 | None:intergenic | 40.0% | |
| TTTCAGAGGCAAAATCCTTG+AGG | + | chr3.2:88478730-88478749 | MS.gene40704:intron | 40.0% | |
| ! | ACTGATGGTGAGCGAATATT+GGG | + | chr3.2:88478797-88478816 | MS.gene40704:CDS | 40.0% |
| ! | GAGGATTTTGTGAATGGTGT+TGG | + | chr3.2:88477487-88477506 | MS.gene40704:CDS | 40.0% |
| ! | GCAACTGAGGATTTTGTGAA+TGG | + | chr3.2:88477481-88477500 | MS.gene40704:CDS | 40.0% |
| ! | GCTTACATTTTTCCCGGATT+TGG | + | chr3.2:88481239-88481258 | MS.gene40704:CDS | 40.0% |
| ! | GGTAAAGCAATTTTCGCTAG+TGG | + | chr3.2:88481052-88481071 | MS.gene40704:CDS | 40.0% |
| ! | TCCTTGAGGTGCTTAAAAAC+TGG | + | chr3.2:88478744-88478763 | MS.gene40704:CDS | 40.0% |
| ! | TGGATTTTGCCGTGTTTTCT+TGG | - | chr3.2:88478908-88478927 | None:intergenic | 40.0% |
| ! | TTGATTGGATCATCTGGAGT+AGG | + | chr3.2:88480721-88480740 | MS.gene40704:CDS | 40.0% |
| ! | TTGGAAAGTGCAAGAATGAG+TGG | - | chr3.2:88480888-88480907 | None:intergenic | 40.0% |
| ! | TTTTTGCGAGTCTCTTCAAC+CGG | - | chr3.2:88480213-88480232 | None:intergenic | 40.0% |
| !! | ATCAAGCCAACCGTTTTGAT+TGG | + | chr3.2:88480706-88480725 | MS.gene40704:CDS | 40.0% |
| !! | ATCTTTTGGCTATTGAAGGC+TGG | + | chr3.2:88480051-88480070 | MS.gene40704:intron | 40.0% |
| !! | CATAGCATTGATGGATCTTC+AGG | + | chr3.2:88478386-88478405 | MS.gene40704:CDS | 40.0% |
| !! | CATTTTTCCCGGATTTGGTT+TGG | + | chr3.2:88481244-88481263 | MS.gene40704:CDS | 40.0% |
| !! | GATTTTGTGAATGGTGTTGG+TGG | + | chr3.2:88477490-88477509 | MS.gene40704:CDS | 40.0% |
| !! | TTTTGGCTAGACAAAAGCTC+CGG | + | chr3.2:88480191-88480210 | MS.gene40704:intron | 40.0% |
| !!! | ACCGTTTTGATTGGATCATC+TGG | + | chr3.2:88480715-88480734 | MS.gene40704:CDS | 40.0% |
| AACACAGACACATACACCAC+CGG | + | chr3.2:88479871-88479890 | MS.gene40704:intron | 45.0% | |
| AAGCATTTATAGGCGTCCTC+AGG | + | chr3.2:88478604-88478623 | MS.gene40704:CDS | 45.0% | |
| AATTCAGGGTACAGCATCTG+TGG | + | chr3.2:88479688-88479707 | MS.gene40704:intron | 45.0% | |
| ACAGCATCTGTGGTATTAGC+AGG | + | chr3.2:88479698-88479717 | MS.gene40704:CDS | 45.0% | |
| AGAGATCCACGCTACAACAA+AGG | + | chr3.2:88478106-88478125 | MS.gene40704:CDS | 45.0% | |
| AGCATTTATAGGCGTCCTCA+GGG | + | chr3.2:88478605-88478624 | MS.gene40704:CDS | 45.0% | |
| ATATTGGGACTAGGCGATCT+TGG | + | chr3.2:88478812-88478831 | MS.gene40704:CDS | 45.0% | |
| CTCAGATTGTGAAGTTGGGT+TGG | - | chr3.2:88480907-88480926 | None:intergenic | 45.0% | |
| CTTATTCTTAGGAGCTGGAG+AGG | + | chr3.2:88479772-88479791 | MS.gene40704:CDS | 45.0% | |
| CTTCACAGGTTCATGCTCAT+GGG | - | chr3.2:88480562-88480581 | None:intergenic | 45.0% | |
| GCAGCTAAGACATACGAACT+TGG | + | chr3.2:88481688-88481707 | MS.gene40704:CDS | 45.0% | |
| GCATTTAGAAGCTCCTTCAC+AGG | - | chr3.2:88480576-88480595 | None:intergenic | 45.0% | |
| GGAGCTTCTAAATGCTGTCA+AGG | + | chr3.2:88480581-88480600 | MS.gene40704:CDS | 45.0% | |
| GTGCACTCAGATTGTGAAGT+TGG | - | chr3.2:88480912-88480931 | None:intergenic | 45.0% | |
| TACCTCATTCAAGGATGCCA+TGG | - | chr3.2:88480776-88480795 | None:intergenic | 45.0% | |
| TGCAACACTAGCAGCAATGT+TGG | - | chr3.2:88481671-88481690 | None:intergenic | 45.0% | |
| TGGGGAGAAAGTTCTTGTAC+AGG | + | chr3.2:88479413-88479432 | MS.gene40704:CDS | 45.0% | |
| TGTCTTCACTCAAGAGCTTC+AGG | + | chr3.2:88478189-88478208 | MS.gene40704:CDS | 45.0% | |
| TTAGACAGAAGCGAGCAACT+GGG | + | chr3.2:88479220-88479239 | MS.gene40704:CDS | 45.0% | |
| TTGCATGTCAGTGAGTGTGA+AGG | - | chr3.2:88479259-88479278 | None:intergenic | 45.0% | |
| TTTGGCTGCACAAGTATCAC+AGG | + | chr3.2:88481588-88481607 | MS.gene40704:CDS | 45.0% | |
| ! | GACTGATGGTGAGCGAATAT+TGG | + | chr3.2:88478796-88478815 | MS.gene40704:CDS | 45.0% |
| ! | GGTGGTGTTAAGGACCTTTA+TGG | + | chr3.2:88477511-88477530 | MS.gene40704:CDS | 45.0% |
| ! | GGTTTGGGTTTGATCATCTC+TGG | + | chr3.2:88481260-88481279 | MS.gene40704:CDS | 45.0% |
| ! | TCGCAAAAAGATCTGGCTTG+TGG | + | chr3.2:88480224-88480243 | MS.gene40704:CDS | 45.0% |
| !! | GCCAGTTTTTAAGCACCTCA+AGG | - | chr3.2:88478748-88478767 | None:intergenic | 45.0% |
| !! | GTCTTCTCTGTTTGGTGTAC+AGG | + | chr3.2:88481777-88481796 | MS.gene40704:intron | 45.0% |
| !! | TTTGTGAATGGTGTTGGTGG+TGG | + | chr3.2:88477493-88477512 | MS.gene40704:CDS | 45.0% |
| AACGGTAGCTTCGATAGCCT+GGG | - | chr3.2:88481866-88481885 | None:intergenic | 50.0% | |
| AGCCATGGCATCCTTGAATG+AGG | + | chr3.2:88480771-88480790 | MS.gene40704:CDS | 50.0% | |
| AGCTCTTGAGTGAAGACAGC+AGG | - | chr3.2:88478187-88478206 | None:intergenic | 50.0% | |
| AGGGCATGGGAATTCCTGTT+GGG | + | chr3.2:88478971-88478990 | MS.gene40704:intron | 50.0% | |
| AGTATCAGTATGGTGTCCGG+TGG | - | chr3.2:88479890-88479909 | None:intergenic | 50.0% | |
| CAAGGAGGTTGTTGAAGCCA+TGG | + | chr3.2:88480756-88480775 | MS.gene40704:CDS | 50.0% | |
| CAGTTGCTCGCTTCTGTCTA+AGG | - | chr3.2:88479221-88479240 | None:intergenic | 50.0% | |
| CATGGCTTCAACAACCTCCT+TGG | - | chr3.2:88480758-88480777 | None:intergenic | 50.0% | |
| CCATGAGCATGAACCTGTGA+AGG | + | chr3.2:88480560-88480579 | MS.gene40704:CDS | 50.0% | |
| CCTTCACAGGTTCATGCTCA+TGG | - | chr3.2:88480563-88480582 | None:intergenic | 50.0% | |
| CTTAGACAGAAGCGAGCAAC+TGG | + | chr3.2:88479219-88479238 | MS.gene40704:CDS | 50.0% | |
| GAAAGTTGCATGTACAGCCC+AGG | + | chr3.2:88481846-88481865 | MS.gene40704:CDS | 50.0% | |
| GCTGGAGAGGTAAGTTCCTA+AGG | + | chr3.2:88479785-88479804 | MS.gene40704:intron | 50.0% | |
| GGTGAGCGAATATTGGGACT+AGG | + | chr3.2:88478803-88478822 | MS.gene40704:CDS | 50.0% | |
| TAGGGCATGGGAATTCCTGT+TGG | + | chr3.2:88478970-88478989 | MS.gene40704:intron | 50.0% | |
| TCTTGAGTGAAGACAGCAGG+AGG | - | chr3.2:88478184-88478203 | None:intergenic | 50.0% | |
| TGAAGACAGCAGGAGGCAAA+AGG | - | chr3.2:88478177-88478196 | None:intergenic | 50.0% | |
| TGACAGGCTTCTCCAACTGT+TGG | - | chr3.2:88478575-88478594 | None:intergenic | 50.0% | |
| TGGCTATTGAAGGCTGGAAC+TGG | + | chr3.2:88480057-88480076 | MS.gene40704:intron | 50.0% | |
| TGGTGAGGATAGTGCTACAG+AGG | + | chr3.2:88477531-88477550 | MS.gene40704:CDS | 50.0% | |
| ! | AGGCGAAGGCATAGGGAAAA+AGG | - | chr3.2:88479076-88479095 | None:intergenic | 50.0% |
| ! | ATGTGGAAGGCGAAGGCATA+GGG | - | chr3.2:88479083-88479102 | None:intergenic | 50.0% |
| ! | GCAAGTCCTTTGTTGTAGCG+TGG | - | chr3.2:88478115-88478134 | None:intergenic | 50.0% |
| ! | TATGTGGAAGGCGAAGGCAT+AGG | - | chr3.2:88479084-88479103 | None:intergenic | 50.0% |
| !! | CTCTGTTTGGTGTACAGGTC+TGG | + | chr3.2:88481782-88481801 | MS.gene40704:intron | 50.0% |
| !! | TGGTGTTGGTGGTGGTGTTA+AGG | + | chr3.2:88477501-88477520 | MS.gene40704:CDS | 50.0% |
| ACAGAAGCGAGCAACTGGGA+AGG | + | chr3.2:88479224-88479243 | MS.gene40704:CDS | 55.0% | |
| ACTAGGCGATCTTGGTTGCC+AGG | + | chr3.2:88478820-88478839 | MS.gene40704:CDS | 55.0% | |
| CAACGGTAGCTTCGATAGCC+TGG | - | chr3.2:88481867-88481886 | None:intergenic | 55.0% | |
| CGTGCGTGATGAGATGCTCT+TGG | + | chr3.2:88481292-88481311 | MS.gene40704:CDS | 55.0% | |
| ! | AGAGCATCTCATCACGCACG+CGG | - | chr3.2:88481292-88481311 | None:intergenic | 55.0% |
| ! | GATCTGGCTTGTGGACTCCA+AGG | + | chr3.2:88480233-88480252 | MS.gene40704:CDS | 55.0% |
| !! | CGGTTGGCTTGATTGCCTGA+TGG | - | chr3.2:88480699-88480718 | None:intergenic | 55.0% |
| GGTTCATGCTCATGGGCCCA+AGG | - | chr3.2:88480555-88480574 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 88477478 | 88481887 | 88477478 | ID=MS.gene40704 |
| chr3.2 | mRNA | 88477478 | 88481887 | 88477478 | ID=MS.gene40704.t1;Parent=MS.gene40704 |
| chr3.2 | exon | 88477478 | 88477590 | 88477478 | ID=MS.gene40704.t1.exon1;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88477478 | 88477590 | 88477478 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88478090 | 88478210 | 88478090 | ID=MS.gene40704.t1.exon2;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88478090 | 88478210 | 88478090 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88478333 | 88478407 | 88478333 | ID=MS.gene40704.t1.exon3;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88478333 | 88478407 | 88478333 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88478500 | 88478651 | 88478500 | ID=MS.gene40704.t1.exon4;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88478500 | 88478651 | 88478500 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88478736 | 88478841 | 88478736 | ID=MS.gene40704.t1.exon5;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88478736 | 88478841 | 88478736 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88478973 | 88479038 | 88478973 | ID=MS.gene40704.t1.exon6;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88478973 | 88479038 | 88478973 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88479150 | 88479245 | 88479150 | ID=MS.gene40704.t1.exon7;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88479150 | 88479245 | 88479150 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88479363 | 88479434 | 88479363 | ID=MS.gene40704.t1.exon8;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88479363 | 88479434 | 88479363 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88479518 | 88479601 | 88479518 | ID=MS.gene40704.t1.exon9;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88479518 | 88479601 | 88479518 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88479695 | 88479793 | 88479695 | ID=MS.gene40704.t1.exon10;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88479695 | 88479793 | 88479695 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88480069 | 88480116 | 88480069 | ID=MS.gene40704.t1.exon11;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88480069 | 88480116 | 88480069 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88480201 | 88480254 | 88480201 | ID=MS.gene40704.t1.exon12;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88480201 | 88480254 | 88480201 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88480504 | 88480602 | 88480504 | ID=MS.gene40704.t1.exon13;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88480504 | 88480602 | 88480504 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88480703 | 88480792 | 88480703 | ID=MS.gene40704.t1.exon14;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88480703 | 88480792 | 88480703 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88480882 | 88480959 | 88480882 | ID=MS.gene40704.t1.exon15;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88480882 | 88480959 | 88480882 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88481052 | 88481126 | 88481052 | ID=MS.gene40704.t1.exon16;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88481052 | 88481126 | 88481052 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88481230 | 88481320 | 88481230 | ID=MS.gene40704.t1.exon17;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88481230 | 88481320 | 88481230 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88481581 | 88481709 | 88481581 | ID=MS.gene40704.t1.exon18;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88481581 | 88481709 | 88481581 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| chr3.2 | exon | 88481799 | 88481887 | 88481799 | ID=MS.gene40704.t1.exon19;Parent=MS.gene40704.t1 |
| chr3.2 | CDS | 88481799 | 88481887 | 88481799 | ID=cds.MS.gene40704.t1;Parent=MS.gene40704.t1 |
| Gene Sequence |
| Protein sequence |
