Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40254.t1 | XP_013462050.1 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1144.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40254.t1 | P12628 | 92.2 | 575 | 43 | 1 | 4 | 578 | 17 | 589 | 4.8e-310 | 1064.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40254.t1 | A0A072VD34 | 99.5 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1144.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40254 | MS.gene055730 | PPI |
| MS.gene40254 | MS.gene27681 | PPI |
| MS.gene40254 | MS.gene27682 | PPI |
| MS.gene40254 | MS.gene049858 | PPI |
| MS.gene40254 | MS.gene65276 | PPI |
| MS.gene40254 | MS.gene08581 | PPI |
| MS.gene40254 | MS.gene58341 | PPI |
| MS.gene40254 | MS.gene39666 | PPI |
| MS.gene40254 | MS.gene023832 | PPI |
| MS.gene40254 | MS.gene020057 | PPI |
| MS.gene40254 | MS.gene27680 | PPI |
| MS.gene40254 | MS.gene019525 | PPI |
| MS.gene40254 | MS.gene004152 | PPI |
| MS.gene40254 | MS.gene055729 | PPI |
| MS.gene40254 | MS.gene52200 | PPI |
| MS.gene40254 | MS.gene39348 | PPI |
| MS.gene40254 | MS.gene022694 | PPI |
| MS.gene40254 | MS.gene055731 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40254.t1 | MTR_3g110330 | 99.481 | 578 | 3 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1184 |
| MS.gene40254.t1 | MTR_8g102620 | 84.588 | 571 | 88 | 0 | 8 | 578 | 21 | 591 | 0.0 | 1011 |
| MS.gene40254.t1 | MTR_8g014390 | 81.371 | 569 | 106 | 0 | 10 | 578 | 20 | 588 | 0.0 | 972 |
| MS.gene40254.t1 | MTR_2g101040 | 81.514 | 568 | 105 | 0 | 11 | 578 | 108 | 675 | 0.0 | 970 |
| MS.gene40254.t1 | MTR_2g101040 | 77.852 | 596 | 104 | 1 | 11 | 578 | 74 | 669 | 0.0 | 956 |
| MS.gene40254.t1 | MTR_2g101040 | 81.541 | 558 | 103 | 0 | 11 | 568 | 74 | 631 | 0.0 | 951 |
| MS.gene40254.t1 | MTR_2g101040 | 81.667 | 540 | 99 | 0 | 11 | 550 | 74 | 613 | 0.0 | 918 |
| MS.gene40254.t1 | MTR_7g076650 | 41.725 | 568 | 296 | 9 | 39 | 574 | 30 | 594 | 6.59e-149 | 442 |
| MS.gene40254.t1 | MTR_8g032040 | 41.270 | 567 | 300 | 9 | 39 | 574 | 33 | 597 | 1.08e-147 | 439 |
| MS.gene40254.t1 | MTR_8g009500 | 42.004 | 569 | 292 | 11 | 42 | 574 | 54 | 620 | 2.81e-146 | 436 |
| MS.gene40254.t1 | MTR_7g076650 | 39.109 | 606 | 296 | 10 | 39 | 574 | 30 | 632 | 2.70e-141 | 424 |
| MS.gene40254.t1 | MTR_7g076650 | 43.788 | 491 | 253 | 7 | 39 | 508 | 30 | 518 | 1.72e-137 | 410 |
| MS.gene40254.t1 | MTR_8g009500 | 42.520 | 508 | 264 | 10 | 93 | 574 | 21 | 526 | 1.33e-132 | 398 |
| MS.gene40254.t1 | MTR_8g009500 | 42.667 | 450 | 231 | 8 | 42 | 466 | 54 | 501 | 1.79e-122 | 371 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40254.t1 | AT5G25880 | 84.238 | 571 | 90 | 0 | 8 | 578 | 18 | 588 | 0.0 | 1019 |
| MS.gene40254.t1 | AT5G11670 | 82.753 | 574 | 99 | 0 | 5 | 578 | 15 | 588 | 0.0 | 984 |
| MS.gene40254.t1 | AT5G25880 | 84.346 | 543 | 85 | 0 | 8 | 550 | 18 | 560 | 0.0 | 970 |
| MS.gene40254.t1 | AT1G79750 | 80.492 | 569 | 111 | 0 | 10 | 578 | 78 | 646 | 0.0 | 969 |
| MS.gene40254.t1 | AT2G19900 | 80.277 | 578 | 114 | 0 | 1 | 578 | 4 | 581 | 0.0 | 964 |
| MS.gene40254.t1 | AT2G19900 | 82.988 | 482 | 82 | 0 | 97 | 578 | 1 | 482 | 0.0 | 826 |
| MS.gene40254.t1 | AT5G25880 | 84.910 | 444 | 67 | 0 | 8 | 451 | 18 | 461 | 0.0 | 805 |
| MS.gene40254.t1 | AT4G00570 | 42.553 | 564 | 294 | 9 | 39 | 574 | 39 | 600 | 1.15e-150 | 446 |
| MS.gene40254.t1 | AT2G13560 | 43.106 | 573 | 286 | 12 | 39 | 574 | 46 | 615 | 3.17e-150 | 446 |
Find 120 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCCTCCAACTAATTTA+AGG | 0.155600 | 3.3:-91208542 | None:intergenic |
| TCATAATGCTTTCGATCTTC+TGG | 0.247214 | 3.3:+91208344 | MS.gene40254:CDS |
| GGCTGATATCTTTCTGATAT+TGG | 0.253198 | 3.3:-91210449 | None:intergenic |
| CAGTTGCTCGCTTCTGTCTA+AGG | 0.286661 | 3.3:-91208027 | None:intergenic |
| GGTGGTGTTAAGGACCTTTA+TGG | 0.303206 | 3.3:+91206334 | MS.gene40254:CDS |
| GACCACACATTCTTATTCTT+AGG | 0.314902 | 3.3:+91208570 | MS.gene40254:CDS |
| CTTTCTCTCTATACTGCATT+AGG | 0.318484 | 3.3:+91207806 | MS.gene40254:CDS |
| CTTGCTTCCCTTAAATTAGT+TGG | 0.327881 | 3.3:+91208534 | MS.gene40254:CDS |
| GACTGATGGTGAGCGAATAT+TGG | 0.334124 | 3.3:+91207603 | MS.gene40254:CDS |
| CATAGCATTGATGGATCTTC+AGG | 0.341593 | 3.3:+91207193 | MS.gene40254:CDS |
| CATGCAGTTAAGCAGAACTA+TGG | 0.350006 | 3.3:+91208202 | MS.gene40254:CDS |
| CTTAGACAGAAGCGAGCAAC+TGG | 0.354222 | 3.3:+91208028 | MS.gene40254:CDS |
| TGTCTTCACTCAAGAGCTTC+AGG | 0.358072 | 3.3:+91206997 | MS.gene40254:CDS |
| GTGCCAACATCAATGGTTAT+AGG | 0.362681 | 3.3:-91207965 | None:intergenic |
| AGTTCCTCCAACTAATTTAA+GGG | 0.376258 | 3.3:-91208541 | None:intergenic |
| GATCAAACCCAAACCAAATC+CGG | 0.382208 | 3.3:-91210059 | None:intergenic |
| AGCTCTTGAGATTTCAAAAC+AGG | 0.383791 | 3.3:+91208904 | MS.gene40254:CDS |
| CAACGGTAGCTTCGATAGCC+TGG | 0.390240 | 3.3:-91210666 | None:intergenic |
| ATTTAAAACAGCTGAAGCTT+TGG | 0.390871 | 3.3:+91210372 | MS.gene40254:intron |
| TTCTTAGTTCTTACTGAAGA+AGG | 0.391345 | 3.3:-91207839 | None:intergenic |
| TCATATTCAACGGGATCAAA+TGG | 0.392063 | 3.3:-91209886 | None:intergenic |
| CCTTCACAGGTTCATGCTCA+TGG | 0.394386 | 3.3:-91209369 | None:intergenic |
| TCACAAGTACATAGCATTGA+TGG | 0.394588 | 3.3:+91207184 | MS.gene40254:CDS |
| GGTTTGGGTTTGATCATCTC+TGG | 0.424457 | 3.3:+91210067 | MS.gene40254:CDS |
| ATATTGGGACTAGGCGATCT+TGG | 0.426877 | 3.3:+91207619 | MS.gene40254:CDS |
| TGCACTCAGATTGTGAAGTT+GGG | 0.436411 | 3.3:-91209717 | None:intergenic |
| ATTGTTTGTGCCAACATCAA+TGG | 0.437244 | 3.3:-91207972 | None:intergenic |
| TGGTGTTGGTGGTGGTGTTA+AGG | 0.439696 | 3.3:+91206324 | MS.gene40254:CDS |
| GTGCACTCAGATTGTGAAGT+TGG | 0.441100 | 3.3:-91209718 | None:intergenic |
| TAGAGAGAAAGTTTCCCAAC+AGG | 0.441390 | 3.3:-91207794 | None:intergenic |
| ACATTCTTATTCTTAGGAGC+TGG | 0.443261 | 3.3:+91208576 | MS.gene40254:CDS |
| TGGCTATTGAAGGCTGGAAC+TGG | 0.448999 | 3.3:+91208866 | MS.gene40254:intron |
| TGACAGGCTTCTCCAACTGT+TGG | 0.449408 | 3.3:-91207379 | None:intergenic |
| TTTGTGAATGGTGTTGGTGG+TGG | 0.450515 | 3.3:+91206316 | MS.gene40254:CDS |
| AAATTTCCTTCATATTCAAC+GGG | 0.451008 | 3.3:-91209895 | None:intergenic |
| ATCTCTTTCTTTCTCAGTGA+AGG | 0.452812 | 3.3:-91206942 | None:intergenic |
| AAGCATTTATAGGCGTCCTC+AGG | 0.456871 | 3.3:+91207411 | MS.gene40254:CDS |
| TTTGATCCCGTTGAATATGA+AGG | 0.472314 | 3.3:+91209889 | MS.gene40254:CDS |
| AAAATTTCCTTCATATTCAA+CGG | 0.476871 | 3.3:-91209896 | None:intergenic |
| CTTCACAGGTTCATGCTCAT+GGG | 0.481605 | 3.3:-91209368 | None:intergenic |
| GTATGAATGTACCTCATTCA+AGG | 0.487503 | 3.3:-91209591 | None:intergenic |
| ACTGATGGTGAGCGAATATT+GGG | 0.489006 | 3.3:+91207604 | MS.gene40254:CDS |
| TGAAGACAGCAGGAGGCAAA+AGG | 0.489689 | 3.3:-91206982 | None:intergenic |
| AAGATCGAAAGCATTATGAT+TGG | 0.489691 | 3.3:-91208340 | None:intergenic |
| ATCTTTCTGATATTGGTGAA+TGG | 0.490184 | 3.3:-91210442 | None:intergenic |
| TCACAGGAGAACTATGATAA+GGG | 0.491757 | 3.3:+91210406 | MS.gene40254:CDS |
| TCTTAGTTCTTACTGAAGAA+GGG | 0.494272 | 3.3:-91207838 | None:intergenic |
| ATCACAGGAGAACTATGATA+AGG | 0.496010 | 3.3:+91210405 | MS.gene40254:CDS |
| CATGGCTTCAACAACCTCCT+TGG | 0.497775 | 3.3:-91209564 | None:intergenic |
| ACTAGGCGATCTTGGTTGCC+AGG | 0.500190 | 3.3:+91207627 | MS.gene40254:CDS |
| TAGCACTATCCTCACCATAA+AGG | 0.502501 | 3.3:-91206348 | None:intergenic |
| CAAGTTATTGTTGTGACTGA+TGG | 0.504528 | 3.3:+91207589 | MS.gene40254:CDS |
| AGAGATGCTCATTATGTTCG+TGG | 0.504930 | 3.3:+91206959 | MS.gene40254:CDS |
| CATATTCAACGGGATCAAAT+GGG | 0.505094 | 3.3:-91209885 | None:intergenic |
| GGGTCTGTATATAAGTTTGA+AGG | 0.508087 | 3.3:+91207432 | MS.gene40254:CDS |
| ACTGTTGGAGTGTAAACAAC+AGG | 0.510690 | 3.3:-91207364 | None:intergenic |
| TGCAACACTAGCAGCAATGT+TGG | 0.511102 | 3.3:-91210470 | None:intergenic |
| CTCAGATTGTGAAGTTGGGT+TGG | 0.511133 | 3.3:-91209713 | None:intergenic |
| GCATTTAGAAGCTCCTTCAC+AGG | 0.511432 | 3.3:-91209382 | None:intergenic |
| ACAGCATCTGTGGTATTAGC+AGG | 0.511802 | 3.3:+91208507 | MS.gene40254:CDS |
| GCTTCCCTTAAATTAGTTGG+AGG | 0.512303 | 3.3:+91208537 | MS.gene40254:CDS |
| TTGATTGGATCATCTGGAGT+AGG | 0.520374 | 3.3:+91209530 | MS.gene40254:CDS |
| TATTGAATTAAAACCTGTCC+AGG | 0.521440 | 3.3:-91209925 | None:intergenic |
| AGGGCATGGGAATTCCTGTT+GGG | 0.523574 | 3.3:+91207780 | MS.gene40254:intron |
| ATGCAGTTAAGCAGAACTAT+GGG | 0.523707 | 3.3:+91208203 | MS.gene40254:CDS |
| AGCTCTTGAGTGAAGACAGC+AGG | 0.526320 | 3.3:-91206992 | None:intergenic |
| TGGGGAGAAAGTTCTTGTAC+AGG | 0.528324 | 3.3:+91208222 | MS.gene40254:CDS |
| CTTATTCTTAGGAGCTGGAG+AGG | 0.528375 | 3.3:+91208581 | MS.gene40254:CDS |
| CATGGAATTTCTCTGTTGCT+AGG | 0.532825 | 3.3:+91206392 | MS.gene40254:CDS |
| TTTACAAGATCCTTTGGTCG+AGG | 0.533764 | 3.3:-91210618 | None:intergenic |
| CAAGGAGGTTGTTGAAGCCA+TGG | 0.536270 | 3.3:+91209565 | MS.gene40254:CDS |
| CAGCAGAAGAAGCTTATACA+TGG | 0.536860 | 3.3:+91209740 | MS.gene40254:CDS |
| TTCTGATATTGGTGAATGGA+GGG | 0.537477 | 3.3:-91210438 | None:intergenic |
| TAGGGCATGGGAATTCCTGT+TGG | 0.538702 | 3.3:+91207779 | MS.gene40254:intron |
| CTGAATGATGAATTCTACAT+TGG | 0.540227 | 3.3:+91208004 | MS.gene40254:CDS |
| TCCAGATGATCCAATCAAAA+CGG | 0.543485 | 3.3:-91209525 | None:intergenic |
| AACGGTAGCTTCGATAGCCT+GGG | 0.544790 | 3.3:-91210665 | None:intergenic |
| CGTGCGTGATGAGATGCTAT+TGG | 0.546453 | 3.3:+91210099 | MS.gene40254:CDS |
| ATCAAACCCAAACCAAATCC+GGG | 0.548446 | 3.3:-91210058 | None:intergenic |
| TTTGGCTGCACAAGTATCAC+AGG | 0.550062 | 3.3:+91210390 | MS.gene40254:CDS |
| TTTCTGATATTGGTGAATGG+AGG | 0.550133 | 3.3:-91210439 | None:intergenic |
| TGTGAAGAGGAACATCATAC+TGG | 0.551543 | 3.3:-91207166 | None:intergenic |
| TTCTCATTTACCTCGACCAA+AGG | 0.555074 | 3.3:+91210608 | MS.gene40254:CDS |
| GTTGTTTACACTCCAACAGT+TGG | 0.556691 | 3.3:+91207367 | MS.gene40254:CDS |
| GCAGCTAAGACATACGAACT+TGG | 0.559765 | 3.3:+91210490 | MS.gene40254:CDS |
| GGTGAGCGAATATTGGGACT+AGG | 0.569263 | 3.3:+91207610 | MS.gene40254:CDS |
| GATCTGGCTTGTGGACTCCA+AGG | 0.572426 | 3.3:+91209042 | MS.gene40254:CDS |
| ATTTACAGGAGAGGAATGAA+AGG | 0.576916 | 3.3:+91207299 | MS.gene40254:intron |
| GGTTCATGCTCATGGGCCCA+AGG | 0.579706 | 3.3:-91209361 | None:intergenic |
| TACCTCATTCAAGGATGCCA+TGG | 0.579790 | 3.3:-91209582 | None:intergenic |
| CCATGAGCATGAACCTGTGA+AGG | 0.581900 | 3.3:+91209369 | MS.gene40254:CDS |
| GAAAGTTGCATGTACAGCCC+AGG | 0.582833 | 3.3:+91210648 | MS.gene40254:CDS |
| GCAAGTCCTTTGTTGTAGCG+TGG | 0.583550 | 3.3:-91206920 | None:intergenic |
| GATGATCCAATCAAAACGGT+TGG | 0.584702 | 3.3:-91209521 | None:intergenic |
| AGAGATCCACGCTACAACAA+AGG | 0.591569 | 3.3:+91206914 | MS.gene40254:CDS |
| AATTCAGGGTACAGCATCTG+TGG | 0.592279 | 3.3:+91208497 | MS.gene40254:intron |
| AATGCTATGTACTTGTGAAG+AGG | 0.595015 | 3.3:-91207179 | None:intergenic |
| CTCCTAAGAATAAGAATGTG+TGG | 0.596180 | 3.3:-91208572 | None:intergenic |
| TCTCTCTATACTGCATTAGG+AGG | 0.598664 | 3.3:+91207809 | MS.gene40254:CDS |
| GGAGCTTCTAAATGCTGTCA+AGG | 0.601373 | 3.3:+91209390 | MS.gene40254:CDS |
| TATTGTGGTTTAGGAATATG+CGG | 0.601391 | 3.3:+91208159 | MS.gene40254:intron |
| AGCATTTATAGGCGTCCTCA+GGG | 0.601908 | 3.3:+91207412 | MS.gene40254:CDS |
| TTGCCTATAACCATTGATGT+TGG | 0.615107 | 3.3:+91207962 | MS.gene40254:CDS |
| TAGCTTAGACATGGCAACTG+AGG | 0.615242 | 3.3:+91206291 | None:intergenic |
| TGTTAAGGACCTTTATGGTG+AGG | 0.622545 | 3.3:+91206339 | MS.gene40254:CDS |
| CTAGCAACAGAGAAATTCCA+TGG | 0.627315 | 3.3:-91206391 | None:intergenic |
| AGCCATGGCATCCTTGAATG+AGG | 0.632620 | 3.3:+91209580 | MS.gene40254:CDS |
| AGAAGCTTATACATGGAGCA+AGG | 0.633567 | 3.3:+91209747 | MS.gene40254:CDS |
| TTTCAGAGGCAAAATCCTTG+AGG | 0.635790 | 3.3:+91207537 | MS.gene40254:intron |
| TCTTGAGTGAAGACAGCAGG+AGG | 0.639397 | 3.3:-91206989 | None:intergenic |
| TTGGAAAGTGCAAGAATGAG+TGG | 0.647457 | 3.3:-91209694 | None:intergenic |
| ACAGAAGCGAGCAACTGGGA+AGG | 0.653659 | 3.3:+91208033 | MS.gene40254:CDS |
| TGGTGAGGATAGTGCTACAG+AGG | 0.659781 | 3.3:+91206354 | MS.gene40254:CDS |
| AGGATCAACTTATCACACCA+TGG | 0.678592 | 3.3:+91206374 | MS.gene40254:CDS |
| AGGAAAGACATTTACCAAGG+AGG | 0.680892 | 3.3:+91209550 | MS.gene40254:CDS |
| TTAGACAGAAGCGAGCAACT+GGG | 0.694021 | 3.3:+91208029 | MS.gene40254:CDS |
| ATAGCATCTCATCACGCACG+CGG | 0.698544 | 3.3:-91210096 | None:intergenic |
| TGCAGTTAAGCAGAACTATG+GGG | 0.709877 | 3.3:+91208204 | MS.gene40254:CDS |
| AGTAGGAAAGACATTTACCA+AGG | 0.712377 | 3.3:+91209547 | MS.gene40254:CDS |
| AAACTTATATACAGACCCTG+AGG | 0.760636 | 3.3:-91207427 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTTATTTACATTCT+TGG | + | chr3.3:91207088-91207107 | MS.gene40254:intron | 10.0% |
| !! | ATATTTGATCAATTAATAAA+TGG | + | chr3.3:91207910-91207929 | MS.gene40254:intron | 10.0% |
| !! | TCATTAAATTATACATAATT+TGG | - | chr3.3:91206741-91206760 | None:intergenic | 10.0% |
| !!! | CTGTTTTAAATAAAATAAAA+TGG | - | chr3.3:91210363-91210382 | None:intergenic | 10.0% |
| !!! | TAAATTAAATACTATCTTTT+TGG | + | chr3.3:91208983-91209002 | MS.gene40254:intron | 10.0% |
| !! | AAAAAAGGAATTATAAAATC+AGG | - | chr3.3:91208304-91208323 | None:intergenic | 15.0% |
| !! | AGATAATCAAGTTAATATAA+AGG | - | chr3.3:91207746-91207765 | None:intergenic | 15.0% |
| !! | GTTATTATTATGTTACATTA+TGG | - | chr3.3:91207056-91207075 | None:intergenic | 15.0% |
| !! | TTAATAAATGGTTTACTATT+TGG | + | chr3.3:91207922-91207941 | MS.gene40254:intron | 15.0% |
| !! | TTATTAATTGATCAAATATG+TGG | - | chr3.3:91207909-91207928 | None:intergenic | 15.0% |
| !!! | TATCTTCAATAATTTTGTTA+GGG | + | chr3.3:91207761-91207780 | MS.gene40254:intron | 15.0% |
| !!! | TTATCTTCAATAATTTTGTT+AGG | + | chr3.3:91207760-91207779 | MS.gene40254:intron | 15.0% |
| !!! | TTTAATGAAAGCATTAATTT+TGG | + | chr3.3:91206753-91206772 | MS.gene40254:intron | 15.0% |
| !! | AAAATAAGAGTCAATAACAT+GGG | - | chr3.3:91208468-91208487 | None:intergenic | 20.0% |
| !! | AAAATCTTCAAACTGAAAAA+AGG | - | chr3.3:91208319-91208338 | None:intergenic | 20.0% |
| !! | AAAATTTCCTTCATATTCAA+CGG | - | chr3.3:91209899-91209918 | None:intergenic | 20.0% |
| !! | AGTCGTTAATTATTATTTCA+TGG | + | chr3.3:91206837-91206856 | MS.gene40254:intron | 20.0% |
| !! | AGTTAATATAAAGGTTTAAC+TGG | - | chr3.3:91207737-91207756 | None:intergenic | 20.0% |
| !! | TTATCAAATTATTACTAGTG+TGG | - | chr3.3:91208729-91208748 | None:intergenic | 20.0% |
| !!! | AAAAATATGGAAGCATTTAT+AGG | + | chr3.3:91207401-91207420 | MS.gene40254:CDS | 20.0% |
| !!! | AATTTCTTACTACTATCTTT+TGG | + | chr3.3:91208846-91208865 | MS.gene40254:intron | 20.0% |
| !!! | AGATTTAATGTGTTTGTTAA+TGG | + | chr3.3:91206656-91206675 | MS.gene40254:intron | 20.0% |
| !!! | ATTTTCTTTGGTTTAATTCA+GGG | + | chr3.3:91208483-91208502 | MS.gene40254:intron | 20.0% |
| !!! | CTTTGACATTTTTTATTTAC+AGG | + | chr3.3:91207285-91207304 | MS.gene40254:intron | 20.0% |
| !!! | TATTTTCTTTGGTTTAATTC+AGG | + | chr3.3:91208482-91208501 | MS.gene40254:intron | 20.0% |
| !!! | TTAATTTTGTTACAGTATCA+AGG | + | chr3.3:91210183-91210202 | MS.gene40254:intron | 20.0% |
| !!! | TTATTGACTCTTATTTTCTT+TGG | + | chr3.3:91208471-91208490 | MS.gene40254:intron | 20.0% |
| ! | AAAAGATGAACCAAATTATC+TGG | + | chr3.3:91206696-91206715 | MS.gene40254:intron | 25.0% |
| ! | AAACAGAGAAGACAAAATTA+AGG | - | chr3.3:91210572-91210591 | None:intergenic | 25.0% |
| ! | AAATTTCCTTCATATTCAAC+GGG | - | chr3.3:91209898-91209917 | None:intergenic | 25.0% |
| ! | AACAACTTACGAACTAATTA+TGG | + | chr3.3:91206476-91206495 | MS.gene40254:intron | 25.0% |
| ! | AACATAGTGTTTGTTTATTG+TGG | + | chr3.3:91208144-91208163 | MS.gene40254:intron | 25.0% |
| ! | ATGGAATCAATTGTGAAATA+TGG | - | chr3.3:91209489-91209508 | None:intergenic | 25.0% |
| ! | CAATGTAATGTAACGTAATT+AGG | - | chr3.3:91206434-91206453 | None:intergenic | 25.0% |
| ! | CTAAGCTAACAAACAAAATA+GGG | - | chr3.3:91207483-91207502 | None:intergenic | 25.0% |
| ! | CTAATGTTTGTGACATTTAT+TGG | + | chr3.3:91209656-91209675 | MS.gene40254:intron | 25.0% |
| ! | GAAAATAAGAGTCAATAACA+TGG | - | chr3.3:91208469-91208488 | None:intergenic | 25.0% |
| ! | GCAAATATCTTATGAGATTA+TGG | - | chr3.3:91209283-91209302 | None:intergenic | 25.0% |
| ! | GTAATTAAATCATCATACCA+TGG | + | chr3.3:91207649-91207668 | MS.gene40254:intron | 25.0% |
| ! | TAATTGATCAAATATGTGGA+AGG | - | chr3.3:91207905-91207924 | None:intergenic | 25.0% |
| ! | TGAATTGAACACATTTAACA+TGG | - | chr3.3:91210523-91210542 | None:intergenic | 25.0% |
| ! | TTGAATGTAACTACATATCT+TGG | + | chr3.3:91208759-91208778 | MS.gene40254:intron | 25.0% |
| !! | AAATCATGAATTTTCTTCTC+AGG | - | chr3.3:91206786-91206805 | None:intergenic | 25.0% |
| !! | ATAACTTGAATAGTCTTTTC+TGG | - | chr3.3:91207577-91207596 | None:intergenic | 25.0% |
| !! | TCTAGTATTACATTTCTAGA+TGG | + | chr3.3:91209082-91209101 | MS.gene40254:intron | 25.0% |
| !! | TGTTTTCAATGATGATATAC+AGG | + | chr3.3:91208389-91208408 | MS.gene40254:CDS | 25.0% |
| !! | TTAAAGTCAGTCACTAATTT+TGG | - | chr3.3:91209989-91210008 | None:intergenic | 25.0% |
| !! | TTAATTTTGTCTTCTCTGTT+TGG | + | chr3.3:91210571-91210590 | MS.gene40254:intron | 25.0% |
| !!! | AAAGCATTAATTTTGGCTAA+TGG | + | chr3.3:91206760-91206779 | MS.gene40254:intron | 25.0% |
| !!! | AAGTACTTGAATTTTTTCAG+AGG | + | chr3.3:91207523-91207542 | MS.gene40254:intron | 25.0% |
| !!! | ACATTTTTTATTTACAGGAG+AGG | + | chr3.3:91207290-91207309 | MS.gene40254:intron | 25.0% |
| !!! | TAACTAAATTAGTCTTCCTT+AGG | - | chr3.3:91208613-91208632 | None:intergenic | 25.0% |
| AAACATCATGGTGCAAAAAA+AGG | - | chr3.3:91208105-91208124 | None:intergenic | 30.0% | |
| AAGATATTTGCTCTATTGCA+GGG | + | chr3.3:91209292-91209311 | MS.gene40254:intron | 30.0% | |
| AAGCATAAATGCAAAAAGTG+AGG | - | chr3.3:91208648-91208667 | None:intergenic | 30.0% | |
| AAGTTCCTCCAACTAATTTA+AGG | - | chr3.3:91208545-91208564 | None:intergenic | 30.0% | |
| ACCACAATAAACAAACATCA+TGG | - | chr3.3:91208117-91208136 | None:intergenic | 30.0% | |
| ACCATGATGTTTGTTTATTG+TGG | + | chr3.3:91208113-91208132 | MS.gene40254:intron | 30.0% | |
| AGTTCCTCCAACTAATTTAA+GGG | - | chr3.3:91208544-91208563 | None:intergenic | 30.0% | |
| ATCTTTCTGATATTGGTGAA+TGG | - | chr3.3:91210445-91210464 | None:intergenic | 30.0% | |
| CAAAATCAGACCAGATAATT+TGG | - | chr3.3:91206709-91206728 | None:intergenic | 30.0% | |
| CCTTTATATCCAAGAAAACA+CGG | + | chr3.3:91207705-91207724 | MS.gene40254:intron | 30.0% | |
| CTGAATGATGAATTCTACAT+TGG | + | chr3.3:91208004-91208023 | MS.gene40254:CDS | 30.0% | |
| GCTAAGCTAACAAACAAAAT+AGG | - | chr3.3:91207484-91207503 | None:intergenic | 30.0% | |
| GGTATGATGATTTAATTACC+TGG | - | chr3.3:91207648-91207667 | None:intergenic | 30.0% | |
| GTGTTTGTTTATTGTGGTTT+AGG | + | chr3.3:91208150-91208169 | MS.gene40254:intron | 30.0% | |
| TAAGATATTTGCTCTATTGC+AGG | + | chr3.3:91209291-91209310 | MS.gene40254:intron | 30.0% | |
| TAATAATGACTGTGTTACAG+TGG | + | chr3.3:91206878-91206897 | MS.gene40254:intron | 30.0% | |
| TAATTCCGATCAAAGATGAA+GGG | + | chr3.3:91209241-91209260 | MS.gene40254:intron | 30.0% | |
| TATTGAATTAAAACCTGTCC+AGG | - | chr3.3:91209928-91209947 | None:intergenic | 30.0% | |
| TATTGTGGTTTAGGAATATG+CGG | + | chr3.3:91208159-91208178 | MS.gene40254:intron | 30.0% | |
| TCAATGATGATATACAGGTA+AGG | + | chr3.3:91208394-91208413 | MS.gene40254:intron | 30.0% | |
| TCTTTGTACAATGTGCAATT+TGG | + | chr3.3:91206537-91206556 | MS.gene40254:intron | 30.0% | |
| TGAACAATTCATCTGTTTCA+TGG | + | chr3.3:91206626-91206645 | MS.gene40254:intron | 30.0% | |
| ! | AACAATGCTTACATTTTTCC+CGG | + | chr3.3:91210040-91210059 | MS.gene40254:CDS | 30.0% |
| ! | AATTGTGTGTTGTTAAGACA+TGG | + | chr3.3:91210319-91210338 | MS.gene40254:intron | 30.0% |
| ! | ATGATTTTCGTGCATCATTA+TGG | + | chr3.3:91206799-91206818 | MS.gene40254:intron | 30.0% |
| ! | ATTTAAAACAGCTGAAGCTT+TGG | + | chr3.3:91210372-91210391 | MS.gene40254:intron | 30.0% |
| ! | ATTTCACAATTGATTCCATC+AGG | + | chr3.3:91209490-91209509 | MS.gene40254:intron | 30.0% |
| ! | ATTTTGTCTCTTCTATTTGC+AGG | + | chr3.3:91209837-91209856 | MS.gene40254:intron | 30.0% |
| ! | CAATAATTTTGTTAGGGCAT+GGG | + | chr3.3:91207767-91207786 | MS.gene40254:intron | 30.0% |
| ! | TCAATAATTTTGTTAGGGCA+TGG | + | chr3.3:91207766-91207785 | MS.gene40254:intron | 30.0% |
| ! | TCTTAGTTCTTACTGAAGAA+GGG | - | chr3.3:91207841-91207860 | None:intergenic | 30.0% |
| ! | TTCTTAGTTCTTACTGAAGA+AGG | - | chr3.3:91207842-91207861 | None:intergenic | 30.0% |
| ! | TTTTGTCTCTTCTATTTGCA+GGG | + | chr3.3:91209838-91209857 | MS.gene40254:intron | 30.0% |
| !! | AAGATCGAAAGCATTATGAT+TGG | - | chr3.3:91208343-91208362 | None:intergenic | 30.0% |
| !! | AATGCTTCCATATTTTTGAC+AGG | - | chr3.3:91207398-91207417 | None:intergenic | 30.0% |
| !! | TACTATCTTTTGGCTATTGA+AGG | + | chr3.3:91208856-91208875 | MS.gene40254:intron | 30.0% |
| !! | TTATGTGTTTTCAGGAAAAG+AGG | + | chr3.3:91207126-91207145 | MS.gene40254:intron | 30.0% |
| !!! | AAATTTTTTTGTTCCTGGAC+AGG | + | chr3.3:91209912-91209931 | MS.gene40254:CDS | 30.0% |
| !!! | ATCTCTGTAGTTTTAAACCA+TGG | - | chr3.3:91207669-91207688 | None:intergenic | 30.0% |
| !!! | GAAGGAAATTTTTTTGTTCC+TGG | + | chr3.3:91209907-91209926 | MS.gene40254:CDS | 30.0% |
| AAACTTATATACAGACCCTG+AGG | - | chr3.3:91207430-91207449 | None:intergenic | 35.0% | |
| AATGCTATGTACTTGTGAAG+AGG | - | chr3.3:91207182-91207201 | None:intergenic | 35.0% | |
| ACATTCTTATTCTTAGGAGC+TGG | + | chr3.3:91208576-91208595 | MS.gene40254:CDS | 35.0% | |
| AGCTCTTGAGATTTCAAAAC+AGG | + | chr3.3:91208904-91208923 | MS.gene40254:CDS | 35.0% | |
| AGTAGGAAAGACATTTACCA+AGG | + | chr3.3:91209547-91209566 | MS.gene40254:CDS | 35.0% | |
| ATCACAGGAGAACTATGATA+AGG | + | chr3.3:91210405-91210424 | MS.gene40254:CDS | 35.0% | |
| ATCTCTTTCTTTCTCAGTGA+AGG | - | chr3.3:91206945-91206964 | None:intergenic | 35.0% | |
| ATGCAGTTAAGCAGAACTAT+GGG | + | chr3.3:91208203-91208222 | MS.gene40254:CDS | 35.0% | |
| ATGTCAAAGACAGTGAGAAA+AGG | - | chr3.3:91207274-91207293 | None:intergenic | 35.0% | |
| ATTGTTTGTGCCAACATCAA+TGG | - | chr3.3:91207975-91207994 | None:intergenic | 35.0% | |
| ATTTACAGGAGAGGAATGAA+AGG | + | chr3.3:91207299-91207318 | MS.gene40254:intron | 35.0% | |
| CAAGTTATTGTTGTGACTGA+TGG | + | chr3.3:91207589-91207608 | MS.gene40254:CDS | 35.0% | |
| CATATTCAACGGGATCAAAT+GGG | - | chr3.3:91209888-91209907 | None:intergenic | 35.0% | |
| CTCCTAAGAATAAGAATGTG+TGG | - | chr3.3:91208575-91208594 | None:intergenic | 35.0% | |
| CTTGCTTCCCTTAAATTAGT+TGG | + | chr3.3:91208534-91208553 | MS.gene40254:CDS | 35.0% | |
| CTTTCTCTCTATACTGCATT+AGG | + | chr3.3:91207806-91207825 | MS.gene40254:CDS | 35.0% | |
| GACCACACATTCTTATTCTT+AGG | + | chr3.3:91208570-91208589 | MS.gene40254:CDS | 35.0% | |
| GGCTGATATCTTTCTGATAT+TGG | - | chr3.3:91210452-91210471 | None:intergenic | 35.0% | |
| GGGTCTGTATATAAGTTTGA+AGG | + | chr3.3:91207432-91207451 | MS.gene40254:CDS | 35.0% | |
| GTAATTCCGATCAAAGATGA+AGG | + | chr3.3:91209240-91209259 | MS.gene40254:intron | 35.0% | |
| GTATGAATGTACCTCATTCA+AGG | - | chr3.3:91209594-91209613 | None:intergenic | 35.0% | |
| TAACTACATATCTTGGACAC+TGG | + | chr3.3:91208766-91208785 | MS.gene40254:intron | 35.0% | |
| TCAACACTTCAAAAAGCCTT+GGG | + | chr3.3:91209345-91209364 | MS.gene40254:CDS | 35.0% | |
| TCACAGGAGAACTATGATAA+GGG | + | chr3.3:91210406-91210425 | MS.gene40254:CDS | 35.0% | |
| TCATAATGCTTTCGATCTTC+TGG | + | chr3.3:91208344-91208363 | MS.gene40254:CDS | 35.0% | |
| TCATATTCAACGGGATCAAA+TGG | - | chr3.3:91209889-91209908 | None:intergenic | 35.0% | |
| TCCAGATGATCCAATCAAAA+CGG | - | chr3.3:91209528-91209547 | None:intergenic | 35.0% | |
| TCTCAATTGCATGTACTTAC+AGG | - | chr3.3:91210128-91210147 | None:intergenic | 35.0% | |
| TGGATGTGTTAGTATCAGTA+TGG | - | chr3.3:91208709-91208728 | None:intergenic | 35.0% | |
| TTCAACACTTCAAAAAGCCT+TGG | + | chr3.3:91209344-91209363 | MS.gene40254:CDS | 35.0% | |
| TTCAACATCTTCAGTGTCTT+TGG | + | chr3.3:91208257-91208276 | MS.gene40254:intron | 35.0% | |
| TTCTGATATTGGTGAATGGA+GGG | - | chr3.3:91210441-91210460 | None:intergenic | 35.0% | |
| TTGCCTATAACCATTGATGT+TGG | + | chr3.3:91207962-91207981 | MS.gene40254:CDS | 35.0% | |
| TTTCTGATATTGGTGAATGG+AGG | - | chr3.3:91210442-91210461 | None:intergenic | 35.0% | |
| TTTGATCCCGTTGAATATGA+AGG | + | chr3.3:91209889-91209908 | MS.gene40254:CDS | 35.0% | |
| ! | CAGTTCAAGCATTTTTACCT+TGG | - | chr3.3:91209062-91209081 | None:intergenic | 35.0% |
| ! | CCGTGTTTTCTTGGATATAA+AGG | - | chr3.3:91207708-91207727 | None:intergenic | 35.0% |
| ! | GCGTATTTTACAAGATCCTT+TGG | - | chr3.3:91210627-91210646 | None:intergenic | 35.0% |
| ! | GGGAAAAATGTAAGCATTGT+TGG | - | chr3.3:91210041-91210060 | None:intergenic | 35.0% |
| ! | GTTTTGCTGCAATGCAATTT+AGG | + | chr3.3:91210015-91210034 | MS.gene40254:intron | 35.0% |
| ! | TCACAAGTACATAGCATTGA+TGG | + | chr3.3:91207184-91207203 | MS.gene40254:CDS | 35.0% |
| !! | ATTTTTCCCGGATTTGGTTT+GGG | + | chr3.3:91210052-91210071 | MS.gene40254:CDS | 35.0% |
| !! | CGTTGTTGTTATGTGTTTTC+AGG | + | chr3.3:91207118-91207137 | MS.gene40254:intron | 35.0% |
| !!! | AAGGCTTTTTGAAGTGTTGA+AGG | - | chr3.3:91209345-91209364 | None:intergenic | 35.0% |
| !!! | AGGCTTTTTGAAGTGTTGAA+GGG | - | chr3.3:91209344-91209363 | None:intergenic | 35.0% |
| AAGAGACTCGCAAAAAGATC+TGG | + | chr3.3:91209026-91209045 | MS.gene40254:CDS | 40.0% | |
| ACACATAACAACAACGACGT+TGG | - | chr3.3:91207114-91207133 | None:intergenic | 40.0% | |
| ACTGTTGGAGTGTAAACAAC+AGG | - | chr3.3:91207367-91207386 | None:intergenic | 40.0% | |
| AGAAGCTTATACATGGAGCA+AGG | + | chr3.3:91209747-91209766 | MS.gene40254:CDS | 40.0% | |
| AGAGATGCTCATTATGTTCG+TGG | + | chr3.3:91206959-91206978 | MS.gene40254:CDS | 40.0% | |
| AGGAAAGACATTTACCAAGG+AGG | + | chr3.3:91209550-91209569 | MS.gene40254:CDS | 40.0% | |
| AGGATCAACTTATCACACCA+TGG | + | chr3.3:91206374-91206393 | MS.gene40254:CDS | 40.0% | |
| ATCAAACCCAAACCAAATCC+GGG | - | chr3.3:91210061-91210080 | None:intergenic | 40.0% | |
| ATCAAATATGTGGAAGGCGA+AGG | - | chr3.3:91207899-91207918 | None:intergenic | 40.0% | |
| CAGCAGAAGAAGCTTATACA+TGG | + | chr3.3:91209740-91209759 | MS.gene40254:CDS | 40.0% | |
| CATGCAGTTAAGCAGAACTA+TGG | + | chr3.3:91208202-91208221 | MS.gene40254:CDS | 40.0% | |
| CATGGAATTTCTCTGTTGCT+AGG | + | chr3.3:91206392-91206411 | MS.gene40254:CDS | 40.0% | |
| CTAGCAACAGAGAAATTCCA+TGG | - | chr3.3:91206394-91206413 | None:intergenic | 40.0% | |
| GATCAAACCCAAACCAAATC+CGG | - | chr3.3:91210062-91210081 | None:intergenic | 40.0% | |
| GATGATCCAATCAAAACGGT+TGG | - | chr3.3:91209524-91209543 | None:intergenic | 40.0% | |
| GCTTCCCTTAAATTAGTTGG+AGG | + | chr3.3:91208537-91208556 | MS.gene40254:CDS | 40.0% | |
| GGAGAAGCCTGTCAAAAATA+TGG | + | chr3.3:91207388-91207407 | MS.gene40254:CDS | 40.0% | |
| GTGCCAACATCAATGGTTAT+AGG | - | chr3.3:91207968-91207987 | None:intergenic | 40.0% | |
| GTTAGTATCAGTATGGTGTC+CGG | - | chr3.3:91208702-91208721 | None:intergenic | 40.0% | |
| GTTGTTTACACTCCAACAGT+TGG | + | chr3.3:91207367-91207386 | MS.gene40254:CDS | 40.0% | |
| TAGAGAGAAAGTTTCCCAAC+AGG | - | chr3.3:91207797-91207816 | None:intergenic | 40.0% | |
| TAGCACTATCCTCACCATAA+AGG | - | chr3.3:91206351-91206370 | None:intergenic | 40.0% | |
| TCTCTCTATACTGCATTAGG+AGG | + | chr3.3:91207809-91207828 | MS.gene40254:CDS | 40.0% | |
| TGCACTCAGATTGTGAAGTT+GGG | - | chr3.3:91209720-91209739 | None:intergenic | 40.0% | |
| TGCAGTTAAGCAGAACTATG+GGG | + | chr3.3:91208204-91208223 | MS.gene40254:CDS | 40.0% | |
| TGTGAAGAGGAACATCATAC+TGG | - | chr3.3:91207169-91207188 | None:intergenic | 40.0% | |
| TGTTAAGGACCTTTATGGTG+AGG | + | chr3.3:91206339-91206358 | MS.gene40254:CDS | 40.0% | |
| TTCTCATTTACCTCGACCAA+AGG | + | chr3.3:91210608-91210627 | MS.gene40254:CDS | 40.0% | |
| TTGTGCCCTTCATCTTTGAT+CGG | - | chr3.3:91209249-91209268 | None:intergenic | 40.0% | |
| TTTACAAGATCCTTTGGTCG+AGG | - | chr3.3:91210621-91210640 | None:intergenic | 40.0% | |
| TTTCAGAGGCAAAATCCTTG+AGG | + | chr3.3:91207537-91207556 | MS.gene40254:intron | 40.0% | |
| ! | ACATTTCTAGATGGAAGTCG+TGG | + | chr3.3:91209091-91209110 | MS.gene40254:intron | 40.0% |
| ! | ACTGATGGTGAGCGAATATT+GGG | + | chr3.3:91207604-91207623 | MS.gene40254:CDS | 40.0% |
| ! | GAGGATTTTGTGAATGGTGT+TGG | + | chr3.3:91206310-91206329 | MS.gene40254:CDS | 40.0% |
| ! | GCAACTGAGGATTTTGTGAA+TGG | + | chr3.3:91206304-91206323 | MS.gene40254:CDS | 40.0% |
| ! | GCTTACATTTTTCCCGGATT+TGG | + | chr3.3:91210046-91210065 | MS.gene40254:CDS | 40.0% |
| ! | GGTAAAGCAATTTTCGCTAG+TGG | + | chr3.3:91209859-91209878 | MS.gene40254:CDS | 40.0% |
| ! | TCCTTGAGGTGCTTAAAAAC+TGG | + | chr3.3:91207551-91207570 | MS.gene40254:CDS | 40.0% |
| ! | TGGATTTTGCCGTGTTTTCT+TGG | - | chr3.3:91207717-91207736 | None:intergenic | 40.0% |
| ! | TTGATTGGATCATCTGGAGT+AGG | + | chr3.3:91209530-91209549 | MS.gene40254:CDS | 40.0% |
| ! | TTGGAAAGTGCAAGAATGAG+TGG | - | chr3.3:91209697-91209716 | None:intergenic | 40.0% |
| ! | TTTTTGCGAGTCTCTTCAAC+CGG | - | chr3.3:91209022-91209041 | None:intergenic | 40.0% |
| !! | ATCAAGCCAACCGTTTTGAT+TGG | + | chr3.3:91209515-91209534 | MS.gene40254:CDS | 40.0% |
| !! | ATCTTTTGGCTATTGAAGGC+TGG | + | chr3.3:91208860-91208879 | MS.gene40254:intron | 40.0% |
| !! | CATAGCATTGATGGATCTTC+AGG | + | chr3.3:91207193-91207212 | MS.gene40254:CDS | 40.0% |
| !! | CATTTTTCCCGGATTTGGTT+TGG | + | chr3.3:91210051-91210070 | MS.gene40254:CDS | 40.0% |
| !! | GATTTTGTGAATGGTGTTGG+TGG | + | chr3.3:91206313-91206332 | MS.gene40254:CDS | 40.0% |
| !! | TTTTGGCTAGACAAAAGCTC+CGG | + | chr3.3:91209000-91209019 | MS.gene40254:intron | 40.0% |
| !!! | ACCGTTTTGATTGGATCATC+TGG | + | chr3.3:91209524-91209543 | MS.gene40254:CDS | 40.0% |
| AACACAGACACATACACCAC+CGG | + | chr3.3:91208680-91208699 | MS.gene40254:intron | 45.0% | |
| AAGCATTTATAGGCGTCCTC+AGG | + | chr3.3:91207411-91207430 | MS.gene40254:CDS | 45.0% | |
| AATTCAGGGTACAGCATCTG+TGG | + | chr3.3:91208497-91208516 | MS.gene40254:intron | 45.0% | |
| ACAGCATCTGTGGTATTAGC+AGG | + | chr3.3:91208507-91208526 | MS.gene40254:CDS | 45.0% | |
| AGAGATCCACGCTACAACAA+AGG | + | chr3.3:91206914-91206933 | MS.gene40254:CDS | 45.0% | |
| AGCATTTATAGGCGTCCTCA+GGG | + | chr3.3:91207412-91207431 | MS.gene40254:CDS | 45.0% | |
| ATATTGGGACTAGGCGATCT+TGG | + | chr3.3:91207619-91207638 | MS.gene40254:CDS | 45.0% | |
| CTCAGATTGTGAAGTTGGGT+TGG | - | chr3.3:91209716-91209735 | None:intergenic | 45.0% | |
| CTTATTCTTAGGAGCTGGAG+AGG | + | chr3.3:91208581-91208600 | MS.gene40254:CDS | 45.0% | |
| CTTCACAGGTTCATGCTCAT+GGG | - | chr3.3:91209371-91209390 | None:intergenic | 45.0% | |
| GCAGCTAAGACATACGAACT+TGG | + | chr3.3:91210490-91210509 | MS.gene40254:CDS | 45.0% | |
| GCATTTAGAAGCTCCTTCAC+AGG | - | chr3.3:91209385-91209404 | None:intergenic | 45.0% | |
| GGAGCTTCTAAATGCTGTCA+AGG | + | chr3.3:91209390-91209409 | MS.gene40254:CDS | 45.0% | |
| GTGCACTCAGATTGTGAAGT+TGG | - | chr3.3:91209721-91209740 | None:intergenic | 45.0% | |
| TACCTCATTCAAGGATGCCA+TGG | - | chr3.3:91209585-91209604 | None:intergenic | 45.0% | |
| TGCAACACTAGCAGCAATGT+TGG | - | chr3.3:91210473-91210492 | None:intergenic | 45.0% | |
| TGGGGAGAAAGTTCTTGTAC+AGG | + | chr3.3:91208222-91208241 | MS.gene40254:CDS | 45.0% | |
| TGTCTTCACTCAAGAGCTTC+AGG | + | chr3.3:91206997-91207016 | MS.gene40254:CDS | 45.0% | |
| TTAGACAGAAGCGAGCAACT+GGG | + | chr3.3:91208029-91208048 | MS.gene40254:CDS | 45.0% | |
| TTGCATGTCAGTGAGTGTGA+AGG | - | chr3.3:91208068-91208087 | None:intergenic | 45.0% | |
| TTTGGCTGCACAAGTATCAC+AGG | + | chr3.3:91210390-91210409 | MS.gene40254:CDS | 45.0% | |
| ! | GACTGATGGTGAGCGAATAT+TGG | + | chr3.3:91207603-91207622 | MS.gene40254:CDS | 45.0% |
| ! | GGTGGTGTTAAGGACCTTTA+TGG | + | chr3.3:91206334-91206353 | MS.gene40254:CDS | 45.0% |
| ! | GGTTTGGGTTTGATCATCTC+TGG | + | chr3.3:91210067-91210086 | MS.gene40254:CDS | 45.0% |
| ! | TCGCAAAAAGATCTGGCTTG+TGG | + | chr3.3:91209033-91209052 | MS.gene40254:CDS | 45.0% |
| !! | GCCAGTTTTTAAGCACCTCA+AGG | - | chr3.3:91207555-91207574 | None:intergenic | 45.0% |
| !! | GTCTTCTCTGTTTGGTGTAC+AGG | + | chr3.3:91210579-91210598 | MS.gene40254:intron | 45.0% |
| !! | TTTGTGAATGGTGTTGGTGG+TGG | + | chr3.3:91206316-91206335 | MS.gene40254:CDS | 45.0% |
| AACGGTAGCTTCGATAGCCT+GGG | - | chr3.3:91210668-91210687 | None:intergenic | 50.0% | |
| AGCCATGGCATCCTTGAATG+AGG | + | chr3.3:91209580-91209599 | MS.gene40254:CDS | 50.0% | |
| AGCTCTTGAGTGAAGACAGC+AGG | - | chr3.3:91206995-91207014 | None:intergenic | 50.0% | |
| AGGGCATGGGAATTCCTGTT+GGG | + | chr3.3:91207780-91207799 | MS.gene40254:intron | 50.0% | |
| AGTATCAGTATGGTGTCCGG+TGG | - | chr3.3:91208699-91208718 | None:intergenic | 50.0% | |
| ATAGCATCTCATCACGCACG+CGG | - | chr3.3:91210099-91210118 | None:intergenic | 50.0% | |
| CAAGGAGGTTGTTGAAGCCA+TGG | + | chr3.3:91209565-91209584 | MS.gene40254:CDS | 50.0% | |
| CAGTTGCTCGCTTCTGTCTA+AGG | - | chr3.3:91208030-91208049 | None:intergenic | 50.0% | |
| CATGGCTTCAACAACCTCCT+TGG | - | chr3.3:91209567-91209586 | None:intergenic | 50.0% | |
| CCATGAGCATGAACCTGTGA+AGG | + | chr3.3:91209369-91209388 | MS.gene40254:CDS | 50.0% | |
| CCTTCACAGGTTCATGCTCA+TGG | - | chr3.3:91209372-91209391 | None:intergenic | 50.0% | |
| CGTGCGTGATGAGATGCTAT+TGG | + | chr3.3:91210099-91210118 | MS.gene40254:CDS | 50.0% | |
| CTTAGACAGAAGCGAGCAAC+TGG | + | chr3.3:91208028-91208047 | MS.gene40254:CDS | 50.0% | |
| GAAAGTTGCATGTACAGCCC+AGG | + | chr3.3:91210648-91210667 | MS.gene40254:CDS | 50.0% | |
| GCTGGAGAGGTAAGTTCCTA+AGG | + | chr3.3:91208594-91208613 | MS.gene40254:intron | 50.0% | |
| GGTGAGCGAATATTGGGACT+AGG | + | chr3.3:91207610-91207629 | MS.gene40254:CDS | 50.0% | |
| TAGGGCATGGGAATTCCTGT+TGG | + | chr3.3:91207779-91207798 | MS.gene40254:intron | 50.0% | |
| TCTTGAGTGAAGACAGCAGG+AGG | - | chr3.3:91206992-91207011 | None:intergenic | 50.0% | |
| TGAAGACAGCAGGAGGCAAA+AGG | - | chr3.3:91206985-91207004 | None:intergenic | 50.0% | |
| TGACAGGCTTCTCCAACTGT+TGG | - | chr3.3:91207382-91207401 | None:intergenic | 50.0% | |
| TGGCTATTGAAGGCTGGAAC+TGG | + | chr3.3:91208866-91208885 | MS.gene40254:intron | 50.0% | |
| TGGTGAGGATAGTGCTACAG+AGG | + | chr3.3:91206354-91206373 | MS.gene40254:CDS | 50.0% | |
| ! | AGGCGAAGGCATAGGGAAAA+AGG | - | chr3.3:91207885-91207904 | None:intergenic | 50.0% |
| ! | ATGTGGAAGGCGAAGGCATA+GGG | - | chr3.3:91207892-91207911 | None:intergenic | 50.0% |
| ! | GCAAGTCCTTTGTTGTAGCG+TGG | - | chr3.3:91206923-91206942 | None:intergenic | 50.0% |
| ! | TATGTGGAAGGCGAAGGCAT+AGG | - | chr3.3:91207893-91207912 | None:intergenic | 50.0% |
| !! | CTCTGTTTGGTGTACAGGTC+TGG | + | chr3.3:91210584-91210603 | MS.gene40254:intron | 50.0% |
| !! | TGGTGTTGGTGGTGGTGTTA+AGG | + | chr3.3:91206324-91206343 | MS.gene40254:CDS | 50.0% |
| ACAGAAGCGAGCAACTGGGA+AGG | + | chr3.3:91208033-91208052 | MS.gene40254:CDS | 55.0% | |
| ACTAGGCGATCTTGGTTGCC+AGG | + | chr3.3:91207627-91207646 | MS.gene40254:CDS | 55.0% | |
| CAACGGTAGCTTCGATAGCC+TGG | - | chr3.3:91210669-91210688 | None:intergenic | 55.0% | |
| ! | GATCTGGCTTGTGGACTCCA+AGG | + | chr3.3:91209042-91209061 | MS.gene40254:CDS | 55.0% |
| !! | CGGTTGGCTTGATTGCCTGA+TGG | - | chr3.3:91209508-91209527 | None:intergenic | 55.0% |
| GGTTCATGCTCATGGGCCCA+AGG | - | chr3.3:91209364-91209383 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 91206301 | 91210689 | 91206301 | ID=MS.gene40254 |
| chr3.3 | mRNA | 91206301 | 91210689 | 91206301 | ID=MS.gene40254.t1;Parent=MS.gene40254 |
| chr3.3 | exon | 91206301 | 91206413 | 91206301 | ID=MS.gene40254.t1.exon1;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91206301 | 91206413 | 91206301 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91206898 | 91207018 | 91206898 | ID=MS.gene40254.t1.exon2;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91206898 | 91207018 | 91206898 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91207140 | 91207214 | 91207140 | ID=MS.gene40254.t1.exon3;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91207140 | 91207214 | 91207140 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91207307 | 91207458 | 91207307 | ID=MS.gene40254.t1.exon4;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91207307 | 91207458 | 91207307 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91207543 | 91207648 | 91207543 | ID=MS.gene40254.t1.exon5;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91207543 | 91207648 | 91207543 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91207782 | 91207847 | 91207782 | ID=MS.gene40254.t1.exon6;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91207782 | 91207847 | 91207782 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91207959 | 91208054 | 91207959 | ID=MS.gene40254.t1.exon7;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91207959 | 91208054 | 91207959 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91208172 | 91208243 | 91208172 | ID=MS.gene40254.t1.exon8;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91208172 | 91208243 | 91208172 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91208327 | 91208410 | 91208327 | ID=MS.gene40254.t1.exon9;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91208327 | 91208410 | 91208327 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91208504 | 91208602 | 91208504 | ID=MS.gene40254.t1.exon10;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91208504 | 91208602 | 91208504 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91208878 | 91208925 | 91208878 | ID=MS.gene40254.t1.exon11;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91208878 | 91208925 | 91208878 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91209010 | 91209063 | 91209010 | ID=MS.gene40254.t1.exon12;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91209010 | 91209063 | 91209010 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91209313 | 91209411 | 91209313 | ID=MS.gene40254.t1.exon13;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91209313 | 91209411 | 91209313 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91209512 | 91209601 | 91209512 | ID=MS.gene40254.t1.exon14;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91209512 | 91209601 | 91209512 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91209691 | 91209768 | 91209691 | ID=MS.gene40254.t1.exon15;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91209691 | 91209768 | 91209691 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91209859 | 91209933 | 91209859 | ID=MS.gene40254.t1.exon16;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91209859 | 91209933 | 91209859 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91210037 | 91210127 | 91210037 | ID=MS.gene40254.t1.exon17;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91210037 | 91210127 | 91210037 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91210383 | 91210511 | 91210383 | ID=MS.gene40254.t1.exon18;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91210383 | 91210511 | 91210383 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| chr3.3 | exon | 91210601 | 91210689 | 91210601 | ID=MS.gene40254.t1.exon19;Parent=MS.gene40254.t1 |
| chr3.3 | CDS | 91210601 | 91210689 | 91210601 | ID=cds.MS.gene40254.t1;Parent=MS.gene40254.t1 |
| Gene Sequence |
| Protein sequence |
