Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020094.t1 | XP_013444087.1 | 100 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 4.00E-112 | 414.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020094.t1 | P49199 | 87.2 | 219 | 24 | 1 | 1 | 215 | 1 | 219 | 1.0e-100 | 367.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020094.t1 | I3T3T7 | 100.0 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 2.9e-112 | 414.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013335 | MS.gene020094 | PPI |
| MS.gene049306 | MS.gene020094 | PPI |
| MS.gene020094 | MS.gene30990 | PPI |
| MS.gene020094 | MS.gene23040 | PPI |
| MS.gene020094 | MS.gene06433 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020094.t1 | MTR_8g012325 | 100.000 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 5.57e-159 | 438 |
| MS.gene020094.t1 | MTR_7g053450 | 91.705 | 217 | 16 | 1 | 1 | 215 | 1 | 217 | 1.17e-126 | 356 |
| MS.gene020094.t1 | MTR_8g012330 | 85.116 | 215 | 30 | 1 | 3 | 215 | 74 | 288 | 2.75e-123 | 350 |
| MS.gene020094.t1 | MTR_4g016670 | 86.528 | 193 | 23 | 2 | 26 | 215 | 26 | 218 | 3.85e-117 | 332 |
| MS.gene020094.t1 | MTR_4g016663 | 73.494 | 83 | 21 | 1 | 134 | 215 | 5 | 87 | 7.61e-36 | 121 |
| MS.gene020094.t1 | MTR_4g016620 | 72.414 | 58 | 15 | 1 | 135 | 191 | 21 | 78 | 6.33e-21 | 84.0 |
| MS.gene020094.t1 | MTR_4g016610 | 58.242 | 91 | 12 | 2 | 125 | 215 | 1045 | 1109 | 4.45e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020094.t1 | AT5G59240 | 85.714 | 203 | 22 | 1 | 1 | 203 | 1 | 196 | 1.62e-126 | 356 |
| MS.gene020094.t1 | AT5G20290 | 80.476 | 210 | 34 | 1 | 1 | 203 | 1 | 210 | 1.00e-108 | 311 |
Find 51 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAAGCTGGCGCTCTTTC+TGG | 0.081596 | 8.3:+77245442 | None:intergenic |
| CACCCTTGCCCTTCTTCTTC+TGG | 0.129125 | 8.3:+77245207 | None:intergenic |
| CAACACTATGGTGTTGATAT+TGG | 0.287835 | 8.3:-77246045 | MS.gene020094:CDS |
| TGTGAAGAGTGCTATTGTTC+AGG | 0.325462 | 8.3:-77246100 | MS.gene020094:CDS |
| AGTTCGCACCAACTCATTGT+TGG | 0.421739 | 8.3:+77246131 | None:intergenic |
| GCTTCCCCATGAGAAGTTAC+CGG | 0.437652 | 8.3:+77246203 | None:intergenic |
| ATACGCAGCTACATTCTTGA+AGG | 0.447637 | 8.3:-77245260 | MS.gene020094:intron |
| GTGAGGAGGATTCGTGTTAG+AGG | 0.449573 | 8.3:-77246261 | MS.gene020094:CDS |
| TGTAAACCACATCGAGCAAA+CGG | 0.457912 | 8.3:+77246160 | None:intergenic |
| CAATGGTACCTTCAACACTA+TGG | 0.459815 | 8.3:-77246057 | MS.gene020094:CDS |
| GGTCAATGCGGCAGAGCTGA+TGG | 0.461383 | 8.3:-77245360 | MS.gene020094:CDS |
| ATGCACAAGAGACGTGAAAC+TGG | 0.464049 | 8.3:-77247188 | MS.gene020094:CDS |
| CCTCAATGTGGGCATCAAGC+TGG | 0.484443 | 8.3:+77245430 | None:intergenic |
| TTGAAGGTACCATTGCTTGA+AGG | 0.488302 | 8.3:+77246065 | None:intergenic |
| GCATGCATTTCTTCTCGACC+TGG | 0.488891 | 8.3:-77245381 | MS.gene020094:CDS |
| TATCAACACCATAGTGTTGA+AGG | 0.489500 | 8.3:+77246049 | None:intergenic |
| GAAGTGGAGAGCTTTGAGAT+TGG | 0.494282 | 8.3:-77246229 | MS.gene020094:CDS |
| TCAGCTCTGCCGCATTGACC+AGG | 0.506358 | 8.3:+77245363 | None:intergenic |
| CAGCTACATTCTTGAAGGTA+AGG | 0.509801 | 8.3:-77245255 | MS.gene020094:CDS |
| ATTGAGGAGCAGTTTGGTGG+TGG | 0.510507 | 8.3:-77245414 | MS.gene020094:CDS |
| TGAAGGTACCATTGCTTGAA+GGG | 0.514607 | 8.3:+77246066 | None:intergenic |
| GCCCACATTGAGGAGCAGTT+TGG | 0.515176 | 8.3:-77245420 | MS.gene020094:CDS |
| TGGATACCGGTAACTTCTCA+TGG | 0.515609 | 8.3:-77246209 | MS.gene020094:CDS |
| CAAAACCCGTTTGCTCGATG+TGG | 0.521241 | 8.3:-77246166 | MS.gene020094:CDS |
| CAATGCTTCCAACAATGAGT+TGG | 0.525534 | 8.3:-77246139 | MS.gene020094:CDS |
| CACATTGAGGAGCAGTTTGG+TGG | 0.527285 | 8.3:-77245417 | MS.gene020094:CDS |
| GAAGAAACTCCAGAAGAAGA+AGG | 0.530638 | 8.3:-77245216 | MS.gene020094:CDS |
| GTAAACCACATCGAGCAAAC+GGG | 0.544170 | 8.3:+77246161 | None:intergenic |
| CCAGCTTGATGCCCACATTG+AGG | 0.548092 | 8.3:-77245430 | MS.gene020094:CDS |
| AGGAGGATTCGTGTTAGAGG+TGG | 0.553665 | 8.3:-77246258 | MS.gene020094:CDS |
| TCTGCAATTACAGGAGGCTG+AGG | 0.558767 | 8.3:-77245520 | MS.gene020094:intron |
| ATGCTGCTCCCTTCAAGCAA+TGG | 0.568267 | 8.3:-77246074 | MS.gene020094:CDS |
| CTCCAGAAGAAGAAGGGCAA+GGG | 0.571076 | 8.3:-77245209 | MS.gene020094:CDS |
| GGATACCGGTAACTTCTCAT+GGG | 0.577966 | 8.3:-77246208 | MS.gene020094:CDS |
| GTCAATGCGGCAGAGCTGAT+GGG | 0.580186 | 8.3:-77245359 | MS.gene020094:intron |
| AAGAAACTCCAGAAGAAGAA+GGG | 0.596297 | 8.3:-77245215 | MS.gene020094:CDS |
| ACCAAACTGCTCCTCAATGT+GGG | 0.596753 | 8.3:+77245419 | None:intergenic |
| AAATGTTAGCAAGAAAGAGG+AGG | 0.606920 | 8.3:-77246010 | MS.gene020094:intron |
| CTGGTGGCAAGAAGAAAGCA+TGG | 0.611110 | 8.3:-77247169 | MS.gene020094:CDS |
| GTTTCATCTAGGTACGAGCT+CGG | 0.613407 | 8.3:-77246324 | MS.gene020094:intron |
| ACTCCAGAAGAAGAAGGGCA+AGG | 0.618644 | 8.3:-77245210 | MS.gene020094:CDS |
| CACCAAACTGCTCCTCAATG+TGG | 0.622269 | 8.3:+77245418 | None:intergenic |
| AGAGCTTTGAGATTGGATAC+CGG | 0.636809 | 8.3:-77246222 | MS.gene020094:CDS |
| TTAGAGGTGGAAATGTGAAG+TGG | 0.659708 | 8.3:-77246245 | MS.gene020094:CDS |
| TCTTCTCGACCTGGTCAATG+CGG | 0.660301 | 8.3:-77245372 | MS.gene020094:CDS |
| ATGGAAACAATACAATCAAG+CGG | 0.663363 | 8.3:+77245184 | None:intergenic |
| CACAAGAGACGTGAAACTGG+TGG | 0.674239 | 8.3:-77247185 | MS.gene020094:CDS |
| GATACCGGTAACTTCTCATG+GGG | 0.694944 | 8.3:-77246207 | MS.gene020094:CDS |
| CAAGCAACAAGACAGTGAGG+AGG | 0.706786 | 8.3:-77246275 | MS.gene020094:CDS |
| TATCAAGCAACAAGACAGTG+AGG | 0.731948 | 8.3:-77246278 | MS.gene020094:CDS |
| GTGGCAAGAAGAAAGCATGG+AGG | 0.807428 | 8.3:-77247166 | MS.gene020094:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTCTGATAAATAATT+AGG | - | chr8.3:77245995-77246014 | MS.gene020094:intron | 10.0% |
| !!! | ATTTTTTAACTAAGATATTT+TGG | - | chr8.3:77246163-77246182 | MS.gene020094:CDS | 10.0% |
| !! | ATACAAAATATGTTTACTTT+CGG | + | chr8.3:77245862-77245881 | None:intergenic | 15.0% |
| !! | ATATAAAAAACGAGTAAAAA+AGG | + | chr8.3:77245400-77245419 | None:intergenic | 15.0% |
| !!! | CACTTTTTTTTTTTTAATGT+GGG | - | chr8.3:77245530-77245549 | MS.gene020094:intron | 15.0% |
| !!! | TCACTTTTTTTTTTTTAATG+TGG | - | chr8.3:77245529-77245548 | MS.gene020094:intron | 15.0% |
| !!! | TTTTGTAATTGTTTTAGATA+TGG | - | chr8.3:77245481-77245500 | MS.gene020094:CDS | 15.0% |
| !! | AAAACCAGTATAAAAATTGT+GGG | + | chr8.3:77246656-77246675 | None:intergenic | 20.0% |
| !! | ATAATTAGGTTATAGATCAA+TGG | - | chr8.3:77246009-77246028 | MS.gene020094:intron | 20.0% |
| !! | ATAATTATAGCCAAAAGATA+AGG | + | chr8.3:77245906-77245925 | None:intergenic | 20.0% |
| !! | GTATTATTTAATCCTGAAAT+GGG | - | chr8.3:77245759-77245778 | MS.gene020094:intron | 20.0% |
| !! | TAATTATAGCCAAAAGATAA+GGG | + | chr8.3:77245905-77245924 | None:intergenic | 20.0% |
| !! | TATTATTTAATCCTGAAATG+GGG | - | chr8.3:77245760-77245779 | MS.gene020094:intron | 20.0% |
| !! | TCTCAATGTTATTATTTGTT+GGG | - | chr8.3:77246124-77246143 | MS.gene020094:CDS | 20.0% |
| !! | TTGAATATGAAAAAATGCAT+AGG | + | chr8.3:77245245-77245264 | None:intergenic | 20.0% |
| !! | TTGGTTGTTTAAATGTTATT+TGG | - | chr8.3:77246674-77246693 | MS.gene020094:intron | 20.0% |
| !! | TTTATATATAATGTGGGAAT+TGG | - | chr8.3:77245572-77245591 | MS.gene020094:intron | 20.0% |
| !!! | AGTTTACATTTCTATTTTCT+GGG | - | chr8.3:77245947-77245966 | MS.gene020094:intron | 20.0% |
| !!! | TAGTTTACATTTCTATTTTC+TGG | - | chr8.3:77245946-77245965 | MS.gene020094:intron | 20.0% |
| !!! | TTTATTCATCTGAAATTTTG+TGG | - | chr8.3:77246822-77246841 | MS.gene020094:intron | 20.0% |
| !!! | TTTTTTTTTTTTAATGTGGG+TGG | - | chr8.3:77245533-77245552 | MS.gene020094:intron | 20.0% |
| ! | CAAAACCAGTATAAAAATTG+TGG | + | chr8.3:77246657-77246676 | None:intergenic | 25.0% |
| ! | CGTATTATTTAATCCTGAAA+TGG | - | chr8.3:77245758-77245777 | MS.gene020094:intron | 25.0% |
| ! | GTATTCAAGGAAAAAAAGTT+AGG | + | chr8.3:77247236-77247255 | None:intergenic | 25.0% |
| ! | GTCTCAATGTTATTATTTGT+TGG | - | chr8.3:77246123-77246142 | MS.gene020094:CDS | 25.0% |
| ! | TATTCCTTAGTAATATGTTC+AGG | - | chr8.3:77246949-77246968 | MS.gene020094:intron | 25.0% |
| ! | TTAAAGATCAGTTAATCACT+TGG | - | chr8.3:77246605-77246624 | MS.gene020094:intron | 25.0% |
| ! | TTAATAATCTCTGCAATTAC+AGG | - | chr8.3:77246983-77247002 | MS.gene020094:intron | 25.0% |
| ! | TTGGGGTTTATATATAATGT+GGG | - | chr8.3:77245566-77245585 | MS.gene020094:intron | 25.0% |
| !! | ATTTCATTTCCCTTATCTTT+TGG | - | chr8.3:77245893-77245912 | MS.gene020094:intron | 25.0% |
| !! | GTTTAAATGTTATTTGGCTT+GGG | - | chr8.3:77246680-77246699 | MS.gene020094:intron | 25.0% |
| !! | TGTTTAAATGTTATTTGGCT+TGG | - | chr8.3:77246679-77246698 | MS.gene020094:intron | 25.0% |
| !! | TTTGGGGTTTATATATAATG+TGG | - | chr8.3:77245565-77245584 | MS.gene020094:intron | 25.0% |
| !!! | ATATTTTGGTTGTTTCATCT+AGG | - | chr8.3:77246177-77246196 | MS.gene020094:CDS | 25.0% |
| !!! | CACAATTTTTATACTGGTTT+TGG | - | chr8.3:77246655-77246674 | MS.gene020094:intron | 25.0% |
| !!! | CAGTGTTAGTTTATAGATTT+TGG | - | chr8.3:77245643-77245662 | MS.gene020094:intron | 25.0% |
| !!! | TGTAATTGTTTTAGATATGG+TGG | - | chr8.3:77245484-77245503 | MS.gene020094:CDS | 25.0% |
| AATTGTGGGCATAAGTATAA+AGG | + | chr8.3:77246642-77246661 | None:intergenic | 30.0% | |
| CTTTCCTGAACATATTACTA+AGG | + | chr8.3:77246956-77246975 | None:intergenic | 30.0% | |
| GAAAAATGTTAGCAAGAAAG+AGG | - | chr8.3:77246499-77246518 | MS.gene020094:intron | 30.0% | |
| GTTGATTGAACAAGATTAGA+AGG | + | chr8.3:77245215-77245234 | None:intergenic | 30.0% | |
| TCAATTTCAACATGTACATG+AGG | + | chr8.3:77246890-77246909 | None:intergenic | 30.0% | |
| ! | TATGCCCACAATTTTTATAC+TGG | - | chr8.3:77246649-77246668 | MS.gene020094:intron | 30.0% |
| !!! | GATTGTTGATTTTGAATCTC+AGG | - | chr8.3:77245285-77245304 | MS.gene020094:intron | 30.0% |
| !!! | TAGTTTTAGATGTCTGGATA+AGG | - | chr8.3:77246848-77246867 | MS.gene020094:intron | 30.0% |
| !!! | TGGATTTAGTTTTAGATGTC+TGG | - | chr8.3:77246842-77246861 | MS.gene020094:intron | 30.0% |
| AAATGTTAGCAAGAAAGAGG+AGG | - | chr8.3:77246502-77246521 | MS.gene020094:intron | 35.0% | |
| AAGAAACTCCAGAAGAAGAA+GGG | - | chr8.3:77247297-77247316 | MS.gene020094:intron | 35.0% | |
| ATAATCTCTGCAATTACAGG+AGG | - | chr8.3:77246986-77247005 | MS.gene020094:intron | 35.0% | |
| ATCAGAAAATATGTGCTACC+TGG | + | chr8.3:77245987-77246006 | None:intergenic | 35.0% | |
| ATTTCAACATGTACATGAGG+TGG | + | chr8.3:77246887-77246906 | None:intergenic | 35.0% | |
| GAAAGAGGAGGTAATGTTTA+TGG | - | chr8.3:77246514-77246533 | MS.gene020094:intron | 35.0% | |
| GATTTGTGTGTTGAGATTCT+GGG | - | chr8.3:77245439-77245458 | MS.gene020094:CDS | 35.0% | |
| ! | CTCTAATTTTCTCTGCACAT+GGG | + | chr8.3:77247045-77247064 | None:intergenic | 35.0% |
| ! | TATCAACACCATAGTGTTGA+AGG | + | chr8.3:77246466-77246485 | None:intergenic | 35.0% |
| ! | TGATTTGTGTGTTGAGATTC+TGG | - | chr8.3:77245438-77245457 | MS.gene020094:CDS | 35.0% |
| !! | CAACACTATGGTGTTGATAT+TGG | - | chr8.3:77246467-77246486 | MS.gene020094:intron | 35.0% |
| !! | GTGGGTGGTTATTTGATTTT+GGG | - | chr8.3:77245548-77245567 | MS.gene020094:intron | 35.0% |
| !! | TGGGATAGTTATTTTGTACC+AGG | - | chr8.3:77245966-77245985 | MS.gene020094:intron | 35.0% |
| !! | TGGGTGGTTATTTGATTTTG+GGG | - | chr8.3:77245549-77245568 | MS.gene020094:intron | 35.0% |
| !! | TGTGGGTGGTTATTTGATTT+TGG | - | chr8.3:77245547-77245566 | MS.gene020094:intron | 35.0% |
| !!! | CTTGATAGTTTTGTGTTAGC+TGG | + | chr8.3:77246221-77246240 | None:intergenic | 35.0% |
| AAATCTTCGTACCCCATTTC+AGG | + | chr8.3:77245774-77245793 | None:intergenic | 40.0% | |
| AGAATGTAGCTGCGTATTCA+AGG | + | chr8.3:77247249-77247268 | None:intergenic | 40.0% | |
| ATACGCAGCTACATTCTTGA+AGG | - | chr8.3:77247252-77247271 | MS.gene020094:intron | 40.0% | |
| CAATGCTTCCAACAATGAGT+TGG | - | chr8.3:77246373-77246392 | MS.gene020094:intron | 40.0% | |
| CAATGGTACCTTCAACACTA+TGG | - | chr8.3:77246455-77246474 | MS.gene020094:intron | 40.0% | |
| CAGCTACATTCTTGAAGGTA+AGG | - | chr8.3:77247257-77247276 | MS.gene020094:intron | 40.0% | |
| GAAGAAACTCCAGAAGAAGA+AGG | - | chr8.3:77247296-77247315 | MS.gene020094:intron | 40.0% | |
| TATCAAGCAACAAGACAGTG+AGG | - | chr8.3:77246234-77246253 | MS.gene020094:CDS | 40.0% | |
| TGTAAACCACATCGAGCAAA+CGG | + | chr8.3:77246355-77246374 | None:intergenic | 40.0% | |
| TTAGAGGTGGAAATGTGAAG+TGG | - | chr8.3:77246267-77246286 | MS.gene020094:CDS | 40.0% | |
| ! | GCTCTAATTTTCTCTGCACA+TGG | + | chr8.3:77247046-77247065 | None:intergenic | 40.0% |
| !! | AGAGCTTTGAGATTGGATAC+CGG | - | chr8.3:77246290-77246309 | MS.gene020094:CDS | 40.0% |
| !! | TGAAGGTACCATTGCTTGAA+GGG | + | chr8.3:77246449-77246468 | None:intergenic | 40.0% |
| !! | TGTGAAGAGTGCTATTGTTC+AGG | - | chr8.3:77246412-77246431 | MS.gene020094:intron | 40.0% |
| !! | TTGAAGGTACCATTGCTTGA+AGG | + | chr8.3:77246450-77246469 | None:intergenic | 40.0% |
| !!! | ATAGTTTTGTGTTAGCTGGC+TGG | + | chr8.3:77246217-77246236 | None:intergenic | 40.0% |
| ACCAAACTGCTCCTCAATGT+GGG | + | chr8.3:77247096-77247115 | None:intergenic | 45.0% | |
| AGTTCGCACCAACTCATTGT+TGG | + | chr8.3:77246384-77246403 | None:intergenic | 45.0% | |
| ATGCACAAGAGACGTGAAAC+TGG | - | chr8.3:77245324-77245343 | MS.gene020094:intron | 45.0% | |
| CGCACATGAATGTCTGAACT+GGG | - | chr8.3:77246100-77246119 | MS.gene020094:CDS | 45.0% | |
| GATACCGGTAACTTCTCATG+GGG | - | chr8.3:77246305-77246324 | MS.gene020094:CDS | 45.0% | |
| GCACATGAATGTCTGAACTG+GGG | - | chr8.3:77246101-77246120 | MS.gene020094:CDS | 45.0% | |
| GGATACCGGTAACTTCTCAT+GGG | - | chr8.3:77246304-77246323 | MS.gene020094:CDS | 45.0% | |
| GTAAACCACATCGAGCAAAC+GGG | + | chr8.3:77246354-77246373 | None:intergenic | 45.0% | |
| GTTTCATCTAGGTACGAGCT+CGG | - | chr8.3:77246188-77246207 | MS.gene020094:CDS | 45.0% | |
| TGGATACCGGTAACTTCTCA+TGG | - | chr8.3:77246303-77246322 | MS.gene020094:CDS | 45.0% | |
| !! | GAAGTGGAGAGCTTTGAGAT+TGG | - | chr8.3:77246283-77246302 | MS.gene020094:CDS | 45.0% |
| !!! | TTTTATATATATAATGAAAT+TGG | - | chr8.3:77245412-77245431 | MS.gene020094:CDS | 5.0% |
| !!! | TTTTATTTTATTTTCTTATA+AGG | - | chr8.3:77245823-77245842 | MS.gene020094:intron | 5.0% |
| ACTCCAGAAGAAGAAGGGCA+AGG | - | chr8.3:77247302-77247321 | MS.gene020094:intron | 50.0% | |
| AGGAGGATTCGTGTTAGAGG+TGG | - | chr8.3:77246254-77246273 | MS.gene020094:CDS | 50.0% | |
| ATGCTGCTCCCTTCAAGCAA+TGG | - | chr8.3:77246438-77246457 | MS.gene020094:intron | 50.0% | |
| CAAAACCCGTTTGCTCGATG+TGG | - | chr8.3:77246346-77246365 | MS.gene020094:intron | 50.0% | |
| CAAGCAACAAGACAGTGAGG+AGG | - | chr8.3:77246237-77246256 | MS.gene020094:CDS | 50.0% | |
| CACAAGAGACGTGAAACTGG+TGG | - | chr8.3:77245327-77245346 | MS.gene020094:intron | 50.0% | |
| CACATTGAGGAGCAGTTTGG+TGG | - | chr8.3:77247095-77247114 | MS.gene020094:intron | 50.0% | |
| CACCAAACTGCTCCTCAATG+TGG | + | chr8.3:77247097-77247116 | None:intergenic | 50.0% | |
| CTCCAGAAGAAGAAGGGCAA+GGG | - | chr8.3:77247303-77247322 | MS.gene020094:intron | 50.0% | |
| CTGGTGGCAAGAAGAAAGCA+TGG | - | chr8.3:77245343-77245362 | MS.gene020094:intron | 50.0% | |
| GACATTCATGTGCGCAGCAT+AGG | + | chr8.3:77246094-77246113 | None:intergenic | 50.0% | |
| GCATGCATTTCTTCTCGACC+TGG | - | chr8.3:77247131-77247150 | MS.gene020094:intron | 50.0% | |
| GCGCACATGAATGTCTGAAC+TGG | - | chr8.3:77246099-77246118 | MS.gene020094:CDS | 50.0% | |
| GCTTCCCCATGAGAAGTTAC+CGG | + | chr8.3:77246312-77246331 | None:intergenic | 50.0% | |
| GTGAGGAGGATTCGTGTTAG+AGG | - | chr8.3:77246251-77246270 | MS.gene020094:CDS | 50.0% | |
| TCTGCAATTACAGGAGGCTG+AGG | - | chr8.3:77246992-77247011 | MS.gene020094:intron | 50.0% | |
| TCTTCTCGACCTGGTCAATG+CGG | - | chr8.3:77247140-77247159 | MS.gene020094:intron | 50.0% | |
| ! | ATTGAGGAGCAGTTTGGTGG+TGG | - | chr8.3:77247098-77247117 | MS.gene020094:intron | 50.0% |
| ! | GTGGCAAGAAGAAAGCATGG+AGG | - | chr8.3:77245346-77245365 | MS.gene020094:intron | 50.0% |
| CACCCTTGCCCTTCTTCTTC+TGG | + | chr8.3:77247308-77247327 | None:intergenic | 55.0% | |
| CATCAAGCTGGCGCTCTTTC+TGG | + | chr8.3:77247073-77247092 | None:intergenic | 55.0% | |
| CCAGCTTGATGCCCACATTG+AGG | - | chr8.3:77247082-77247101 | MS.gene020094:intron | 55.0% | |
| CCTCAATGTGGGCATCAAGC+TGG | + | chr8.3:77247085-77247104 | None:intergenic | 55.0% | |
| GCCCACATTGAGGAGCAGTT+TGG | - | chr8.3:77247092-77247111 | MS.gene020094:intron | 55.0% | |
| GTCAATGCGGCAGAGCTGAT+GGG | - | chr8.3:77247153-77247172 | MS.gene020094:intron | 55.0% | |
| GGTCAATGCGGCAGAGCTGA+TGG | - | chr8.3:77247152-77247171 | MS.gene020094:intron | 60.0% | |
| ! | TCAGCTCTGCCGCATTGACC+AGG | + | chr8.3:77247152-77247171 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 77245199 | 77247335 | 77245199 | ID=MS.gene020094 |
| chr8.3 | mRNA | 77245199 | 77247335 | 77245199 | ID=MS.gene020094.t1;Parent=MS.gene020094 |
| chr8.3 | exon | 77247332 | 77247335 | 77247332 | ID=MS.gene020094.t1.exon1;Parent=MS.gene020094.t1 |
| chr8.3 | CDS | 77247332 | 77247335 | 77247332 | ID=cds.MS.gene020094.t1;Parent=MS.gene020094.t1 |
| chr8.3 | exon | 77247155 | 77247227 | 77247155 | ID=MS.gene020094.t1.exon2;Parent=MS.gene020094.t1 |
| chr8.3 | CDS | 77247155 | 77247227 | 77247155 | ID=cds.MS.gene020094.t1;Parent=MS.gene020094.t1 |
| chr8.3 | exon | 77246011 | 77246335 | 77246011 | ID=MS.gene020094.t1.exon3;Parent=MS.gene020094.t1 |
| chr8.3 | CDS | 77246011 | 77246335 | 77246011 | ID=cds.MS.gene020094.t1;Parent=MS.gene020094.t1 |
| chr8.3 | exon | 77245360 | 77245529 | 77245360 | ID=MS.gene020094.t1.exon4;Parent=MS.gene020094.t1 |
| chr8.3 | CDS | 77245360 | 77245529 | 77245360 | ID=cds.MS.gene020094.t1;Parent=MS.gene020094.t1 |
| chr8.3 | exon | 77245199 | 77245274 | 77245199 | ID=MS.gene020094.t1.exon5;Parent=MS.gene020094.t1 |
| chr8.3 | CDS | 77245199 | 77245274 | 77245199 | ID=cds.MS.gene020094.t1;Parent=MS.gene020094.t1 |
| Gene Sequence |
| Protein sequence |
