Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020444.t1 | XP_024635344.1 | 93.7 | 687 | 42 | 1 | 1 | 687 | 1 | 686 | 5.70E-293 | 1016.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020444.t1 | Q8VYB7 | 53.2 | 690 | 303 | 11 | 1 | 686 | 1 | 674 | 5.3e-122 | 439.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020444.t1 | A0A396J0G0 | 93.7 | 687 | 42 | 1 | 1 | 687 | 1 | 686 | 4.1e-293 | 1016.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64882 | MS.gene020444 | PPI |
| MS.gene029385 | MS.gene020444 | PPI |
| MS.gene71852 | MS.gene020444 | PPI |
| MS.gene09288 | MS.gene020444 | PPI |
| MS.gene86551 | MS.gene020444 | PPI |
| MS.gene023504 | MS.gene020444 | PPI |
| MS.gene76283 | MS.gene020444 | PPI |
| MS.gene08956 | MS.gene020444 | PPI |
| MS.gene72652 | MS.gene020444 | PPI |
| MS.gene065113 | MS.gene020444 | PPI |
| MS.gene65326 | MS.gene020444 | PPI |
| MS.gene020444 | MS.gene08800 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020444.t1 | MTR_3g100110 | 91.360 | 706 | 41 | 2 | 1 | 687 | 1 | 705 | 0.0 | 1317 |
| MS.gene020444.t1 | MTR_2g098650 | 27.568 | 185 | 118 | 4 | 41 | 224 | 62 | 231 | 6.04e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020444.t1 | AT4G24490 | 52.243 | 691 | 308 | 13 | 1 | 686 | 1 | 674 | 0.0 | 654 |
| MS.gene020444.t1 | AT4G24490 | 52.243 | 691 | 308 | 13 | 1 | 686 | 1 | 674 | 0.0 | 654 |
| MS.gene020444.t1 | AT5G41820 | 46.003 | 713 | 331 | 22 | 1 | 687 | 1 | 685 | 1.57e-179 | 527 |
| MS.gene020444.t1 | AT5G41820 | 46.003 | 713 | 331 | 22 | 1 | 687 | 1 | 685 | 1.57e-179 | 527 |
| MS.gene020444.t1 | AT3G59380 | 28.054 | 221 | 130 | 8 | 59 | 273 | 74 | 271 | 9.20e-15 | 76.6 |
Find 113 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACACTTCAAAAGTAATT+TGG | 0.107140 | 3.3:+82566463 | None:intergenic |
| TCTTCAAATGGATATCATTA+TGG | 0.162505 | 3.3:-82566495 | MS.gene020444:CDS |
| AAAGAACGTACATGCGATTT+TGG | 0.179617 | 3.3:+82568536 | None:intergenic |
| GTTATAGTGCCACTAAGTTT+TGG | 0.255391 | 3.3:-82564498 | MS.gene020444:CDS |
| GCTCAAATCTAAAGCTTCTT+TGG | 0.257947 | 3.3:+82568422 | None:intergenic |
| TTCCAAGCTGTGTAACATTC+TGG | 0.277030 | 3.3:+82568378 | None:intergenic |
| GTAGGTAGTTGTTTCCATTC+AGG | 0.286385 | 3.3:+82566796 | None:intergenic |
| GTACCTAAACATTGGAAATA+TGG | 0.296962 | 3.3:-82566580 | MS.gene020444:CDS |
| TTGACTGATTTGAACATATC+AGG | 0.309395 | 3.3:-82564445 | MS.gene020444:CDS |
| TGATTGAAATATAGAATTAC+TGG | 0.315763 | 3.3:+82566720 | None:intergenic |
| ATTACTCTGCGTGGCATAAT+AGG | 0.315834 | 3.3:-82567799 | MS.gene020444:CDS |
| GTGCATGGCATCATAGAAAA+TGG | 0.322690 | 3.3:-82568093 | MS.gene020444:CDS |
| TCTTGAAGGAAGATCTTGTT+TGG | 0.323319 | 3.3:-82566650 | MS.gene020444:CDS |
| ACTCGAGTACTGCTCAAGTT+TGG | 0.326932 | 3.3:-82566608 | MS.gene020444:CDS |
| CTTCAAATGGATATCATTAT+GGG | 0.330697 | 3.3:-82566494 | MS.gene020444:CDS |
| AATTGGAAGTTGTTGGAATA+TGG | 0.336661 | 3.3:+82566319 | None:intergenic |
| GCTCCATATTTCCAATGTTT+AGG | 0.346075 | 3.3:+82566577 | None:intergenic |
| AGATAATGAATTGCGCCTTC+TGG | 0.350273 | 3.3:-82568044 | MS.gene020444:CDS |
| AACAACTACCTACATGGTTC+TGG | 0.351693 | 3.3:-82566786 | MS.gene020444:CDS |
| CTCCTCTACTCGTTTCATCT+TGG | 0.355540 | 3.3:-82566842 | MS.gene020444:CDS |
| ACACACTTCAAAAGTAATTT+GGG | 0.361270 | 3.3:+82566464 | None:intergenic |
| TTCTTTATGGGAAAATCCTT+CGG | 0.370115 | 3.3:+82566980 | None:intergenic |
| CGTTACATCTCTCTTTGATC+AGG | 0.378564 | 3.3:-82568304 | MS.gene020444:CDS |
| CTCGAGTACTGCTCAAGTTT+GGG | 0.391033 | 3.3:-82566607 | MS.gene020444:CDS |
| TCTTTATAGTAGTGGCAATA+TGG | 0.395093 | 3.3:+82565212 | None:intergenic |
| TAGGTAGTTGTTTCCATTCA+GGG | 0.395863 | 3.3:+82566797 | None:intergenic |
| ATGCACCAATTGGAAGTTGT+TGG | 0.414123 | 3.3:+82566312 | None:intergenic |
| TTTCCACGTTGCCCGTCAAC+AGG | 0.415381 | 3.3:+82566420 | None:intergenic |
| AATCTATCATTGTCACGAAT+GGG | 0.417993 | 3.3:-82565146 | MS.gene020444:CDS |
| CTTTGATCAGGAGCTCAAAC+TGG | 0.426928 | 3.3:-82568292 | MS.gene020444:intron |
| AATTGCCTCCATGCACCAAT+TGG | 0.435270 | 3.3:+82566302 | None:intergenic |
| ATCCAGAATGTTACACAGCT+TGG | 0.438422 | 3.3:-82568380 | MS.gene020444:CDS |
| GATCACCGTTGGACATTCTA+CGG | 0.445219 | 3.3:-82566526 | MS.gene020444:CDS |
| AGATGTAACGGAATCGGAAT+CGG | 0.448382 | 3.3:+82568317 | None:intergenic |
| ATCTACTTTATCTAAAAGAA+AGG | 0.448700 | 3.3:-82567003 | MS.gene020444:CDS |
| CACATACTGAAGTATTTGCC+TGG | 0.450894 | 3.3:-82564546 | MS.gene020444:CDS |
| GAAAGCTTCCCAAAACTTAG+TGG | 0.451020 | 3.3:+82564489 | None:intergenic |
| GTTTCATCTTGGCCATCTCA+TGG | 0.462823 | 3.3:-82566831 | MS.gene020444:CDS |
| TGTTAAATCTGAACTCTTGA+AGG | 0.463405 | 3.3:-82566664 | MS.gene020444:CDS |
| AAGAAGAATTTCAAGTCCTA+TGG | 0.463824 | 3.3:-82568115 | MS.gene020444:CDS |
| GTAAAGCTTGAGAACTTCTT+CGG | 0.467812 | 3.3:+82566064 | None:intergenic |
| AAAGAGAGATGTAACGGAAT+CGG | 0.469543 | 3.3:+82568311 | None:intergenic |
| AATATTTCTTGCAATGAGCT+AGG | 0.472390 | 3.3:-82564616 | MS.gene020444:CDS |
| TATTTCAATCAAGCAGTTGA+AGG | 0.472589 | 3.3:-82566708 | MS.gene020444:CDS |
| GGAGCTAATATAACCCTGAA+TGG | 0.479944 | 3.3:-82566810 | MS.gene020444:CDS |
| CTCGAGTTATTCGTAGAAAG+TGG | 0.480013 | 3.3:+82566624 | None:intergenic |
| AATGAACTTCGATCAATTGA+AGG | 0.480415 | 3.3:-82565077 | MS.gene020444:intron |
| ATATTCCAACAACTTCCAAT+TGG | 0.483856 | 3.3:-82566317 | MS.gene020444:CDS |
| TCGACCTCGCAAACCGTTGA+AGG | 0.489009 | 3.3:-82568632 | MS.gene020444:CDS |
| AACGTGGAAAGTTGACTTCA+TGG | 0.490403 | 3.3:-82566407 | MS.gene020444:CDS |
| ATCGAAGTTCATTGTGGCTA+AGG | 0.491541 | 3.3:+82565087 | None:intergenic |
| GATTCATCTTCTTCCTTCAA+CGG | 0.492372 | 3.3:+82568619 | None:intergenic |
| AAATCTATCATTGTCACGAA+TGG | 0.496579 | 3.3:-82565147 | MS.gene020444:CDS |
| TTCAAGATTCGCTGTCAGAC+TGG | 0.504932 | 3.3:-82566260 | MS.gene020444:intron |
| TTACACCGAGCTGATGAAGT+TGG | 0.509117 | 3.3:-82566045 | MS.gene020444:CDS |
| TAGAAAATGGGTGCTTAGCA+AGG | 0.509907 | 3.3:-82568080 | MS.gene020444:CDS |
| AACGGTGATCTCTATAGAAT+AGG | 0.511032 | 3.3:+82566539 | None:intergenic |
| AATCTGAGTCATAATAAACT+TGG | 0.514137 | 3.3:-82564691 | MS.gene020444:CDS |
| CTGATGCGTCTTTATAGTAG+TGG | 0.518229 | 3.3:+82565204 | None:intergenic |
| AAGGATTTCAAAACGGTCCC+AGG | 0.521246 | 3.3:+82564528 | None:intergenic |
| TCTATGATGCCATGCACCAT+AGG | 0.521696 | 3.3:+82568099 | None:intergenic |
| ATTCAGATGATCAGAGTGGT+TGG | 0.527102 | 3.3:-82566908 | MS.gene020444:CDS |
| AATACTTCAGTATGTGCTAA+AGG | 0.531773 | 3.3:+82564553 | None:intergenic |
| TCTTCCTTCAACGGTTTGCG+AGG | 0.531913 | 3.3:+82568628 | None:intergenic |
| CTCATACAGAACCTGTTGAC+GGG | 0.537445 | 3.3:-82566431 | MS.gene020444:CDS |
| CTACAAGGATGAGCACAGTC+TGG | 0.544150 | 3.3:-82566003 | MS.gene020444:CDS |
| CAGTCTGGTATTACTTCGGC+AGG | 0.545028 | 3.3:-82565988 | MS.gene020444:intron |
| TCATTTAAGCACTTCAGAGT+AGG | 0.549730 | 3.3:+82564373 | None:intergenic |
| GTGCTAAAGGCGAAGAGCAT+AGG | 0.549796 | 3.3:+82564566 | None:intergenic |
| ATACTAGTTATGTGTGTCTA+CGG | 0.552144 | 3.3:-82565175 | MS.gene020444:CDS |
| TAAACAAGATAGAAGTTGCA+TGG | 0.554228 | 3.3:+82564714 | None:intergenic |
| AGAAAATGGGTGCTTAGCAA+GGG | 0.556032 | 3.3:-82568079 | MS.gene020444:CDS |
| AATGGAAACAACTACCTACA+TGG | 0.558777 | 3.3:-82566792 | MS.gene020444:CDS |
| AACAACTTCCAATTGGTGCA+TGG | 0.563161 | 3.3:-82566310 | MS.gene020444:CDS |
| GCTCATACAGAACCTGTTGA+CGG | 0.564601 | 3.3:-82566432 | MS.gene020444:CDS |
| TTCACGCTTGGAATTACCGA+AGG | 0.566706 | 3.3:-82567991 | MS.gene020444:intron |
| TGCCACAAAGGATTTCAAAA+CGG | 0.571179 | 3.3:+82564521 | None:intergenic |
| GTTATATTAGCTCCATGAGA+TGG | 0.576501 | 3.3:+82566819 | None:intergenic |
| TGCATGGCATCATAGAAAAT+GGG | 0.578210 | 3.3:-82568092 | MS.gene020444:CDS |
| CTGATCAAAGAGAGATGTAA+CGG | 0.593921 | 3.3:+82568305 | None:intergenic |
| ATCACCGTTGGACATTCTAC+GGG | 0.595563 | 3.3:-82566525 | MS.gene020444:CDS |
| AGCACAGTCTGGTATTACTT+CGG | 0.602433 | 3.3:-82565992 | MS.gene020444:CDS |
| TGGATCCAACTTCATCAGCT+CGG | 0.609055 | 3.3:+82566040 | None:intergenic |
| GTATTTCAACTCATCCTCAT+CGG | 0.609479 | 3.3:+82567853 | None:intergenic |
| ACATACTGAAGTATTTGCCT+GGG | 0.609573 | 3.3:-82564545 | MS.gene020444:CDS |
| ATTTCAAGTCCTATGGTGCA+TGG | 0.610024 | 3.3:-82568108 | MS.gene020444:CDS |
| TTGAGAGAGATTGTGTTGAA+CGG | 0.611215 | 3.3:+82568341 | None:intergenic |
| ATCTATCATTGTCACGAATG+GGG | 0.611320 | 3.3:-82565145 | MS.gene020444:CDS |
| ACTTCAAAAGTAATTTGGGA+AGG | 0.614137 | 3.3:+82566468 | None:intergenic |
| CAATTGATCGAAGTTCATTG+TGG | 0.616533 | 3.3:+82565081 | None:intergenic |
| GAGACAAACCAGAACCATGT+AGG | 0.618326 | 3.3:+82566778 | None:intergenic |
| TGGAAAGTTGACTTCATGGA+AGG | 0.621972 | 3.3:-82566403 | MS.gene020444:CDS |
| ACTCTGCGTGGCATAATAGG+AGG | 0.623837 | 3.3:-82567796 | MS.gene020444:intron |
| TGGGTCGTGTACCTAAACAT+TGG | 0.624380 | 3.3:-82566588 | MS.gene020444:CDS |
| AAGGCGCAATTCATTATCTG+TGG | 0.624582 | 3.3:+82568048 | None:intergenic |
| TTATCTAAAAGAAAGGCCGA+AGG | 0.627691 | 3.3:-82566996 | MS.gene020444:CDS |
| CCTTCTGAAAATCATCCAGA+AGG | 0.629146 | 3.3:+82568029 | None:intergenic |
| TATTCTATAGAGATCACCGT+TGG | 0.629388 | 3.3:-82566537 | MS.gene020444:CDS |
| AACACATTCTCTATACTACA+AGG | 0.631342 | 3.3:-82566018 | MS.gene020444:CDS |
| GGCCAAGATGAAACGAGTAG+AGG | 0.632437 | 3.3:+82566840 | None:intergenic |
| TTCAAATGGATATCATTATG+GGG | 0.641853 | 3.3:-82566493 | MS.gene020444:CDS |
| TTGTAGTATAGAGAATGTGT+TGG | 0.648966 | 3.3:+82566020 | None:intergenic |
| ACTAATGAAAATATCCGATG+AGG | 0.652167 | 3.3:-82567867 | MS.gene020444:CDS |
| GAAAATGGGTGCTTAGCAAG+GGG | 0.654222 | 3.3:-82568078 | MS.gene020444:CDS |
| TGGCACTATAACTGCCACAA+AGG | 0.659141 | 3.3:+82564509 | None:intergenic |
| AACTTCCAATTGGTGCATGG+AGG | 0.682685 | 3.3:-82566307 | MS.gene020444:CDS |
| ACTGATTCAGATGATCAGAG+TGG | 0.689082 | 3.3:-82566912 | MS.gene020444:CDS |
| CCTTACTCGAACAAAATGCA+CGG | 0.695554 | 3.3:-82568655 | None:intergenic |
| AATACCCGTAGAATGTCCAA+CGG | 0.701251 | 3.3:+82566521 | None:intergenic |
| GAACCTGTTGACGGGCAACG+TGG | 0.708889 | 3.3:-82566423 | MS.gene020444:CDS |
| ATGGTGATTAGTAGATACAG+CGG | 0.715834 | 3.3:+82566338 | None:intergenic |
| AGGTGTGAACTCATCTACAG+TGG | 0.750657 | 3.3:-82566688 | MS.gene020444:CDS |
| AGCGACTCTAGCGATCTGAG+AGG | 0.759932 | 3.3:+82564649 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAACAAATAAAATTATTTA+TGG | + | chr3.3:82567722-82567741 | None:intergenic | 10.0% |
| !!! | TTTATTTTTAATGAATTTTC+TGG | - | chr3.3:82567074-82567093 | MS.gene020444:intron | 10.0% |
| !!! | TTTGAAAAAAAATATTCTTT+TGG | - | chr3.3:82565580-82565599 | MS.gene020444:intron | 10.0% |
| !! | ACAAATAAAATTATTTATGG+TGG | + | chr3.3:82567719-82567738 | None:intergenic | 15.0% |
| !!! | AAAAAAATATTCTTTTGGTA+TGG | - | chr3.3:82565585-82565604 | MS.gene020444:intron | 15.0% |
| !!! | ATTTTTTCTTTTATCATGTT+GGG | + | chr3.3:82566912-82566931 | None:intergenic | 15.0% |
| !!! | TTATTTTCGTTTTGATTTTT+TGG | - | chr3.3:82564527-82564546 | MS.gene020444:CDS | 15.0% |
| !! | AATAAAAAAGCAAACAAAAG+TGG | + | chr3.3:82565448-82565467 | None:intergenic | 20.0% |
| !! | AATGAGAATATTGATGTTAA+TGG | - | chr3.3:82568119-82568138 | MS.gene020444:CDS | 20.0% |
| !! | AATTTAGCGTTATTATTACT+GGG | - | chr3.3:82568010-82568029 | MS.gene020444:CDS | 20.0% |
| !! | ATAATAACGCTAAATTATAG+TGG | + | chr3.3:82568006-82568025 | None:intergenic | 20.0% |
| !! | ATCTACTTTATCTAAAAGAA+AGG | - | chr3.3:82565997-82566016 | MS.gene020444:CDS | 20.0% |
| !! | GAAATATAACTGGAAAATAT+GGG | + | chr3.3:82566800-82566819 | None:intergenic | 20.0% |
| !! | TAATTTAGCGTTATTATTAC+TGG | - | chr3.3:82568009-82568028 | MS.gene020444:CDS | 20.0% |
| !! | TATACAATGAGATTGTTTAT+GGG | + | chr3.3:82565655-82565674 | None:intergenic | 20.0% |
| !! | TGAAATATAACTGGAAAATA+TGG | + | chr3.3:82566801-82566820 | None:intergenic | 20.0% |
| !! | TGATTGAAATATAGAATTAC+TGG | + | chr3.3:82566283-82566302 | None:intergenic | 20.0% |
| !! | TTTACCAAAAAATTAGATGA+TGG | - | chr3.3:82567350-82567369 | MS.gene020444:intron | 20.0% |
| !!! | ACAAACATTGACATATATTT+TGG | - | chr3.3:82565480-82565499 | MS.gene020444:intron | 20.0% |
| !!! | ATAAAATTATTTATGGTGGA+AGG | + | chr3.3:82567715-82567734 | None:intergenic | 20.0% |
| !!! | CTTCAAAATGATCAATTTTT+CGG | + | chr3.3:82566633-82566652 | None:intergenic | 20.0% |
| !!! | GAGAATATTTTTGAGTTAAT+GGG | - | chr3.3:82567372-82567391 | MS.gene020444:intron | 20.0% |
| !!! | GATTTTTTCTTTTATCATGT+TGG | + | chr3.3:82566913-82566932 | None:intergenic | 20.0% |
| !!! | TCCTTTTCTTTTTATCAAAA+GGG | + | chr3.3:82565047-82565066 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCTTTTTATCAAA+AGG | + | chr3.3:82565048-82565067 | None:intergenic | 20.0% |
| !!! | TTGCTTTTTTATTTATGTTC+TGG | - | chr3.3:82565455-82565474 | MS.gene020444:intron | 20.0% |
| !!! | TTGGTTATTTTGTATTGTTT+AGG | - | chr3.3:82564848-82564867 | MS.gene020444:intron | 20.0% |
| !!! | TTTTATTTGTTCATGTTATG+AGG | - | chr3.3:82567729-82567748 | MS.gene020444:intron | 20.0% |
| !!! | TTTTGGTTTTTGAATAAATC+TGG | - | chr3.3:82564544-82564563 | MS.gene020444:CDS | 20.0% |
| !!! | TTTTTTCTTTTATCATGTTG+GGG | + | chr3.3:82566911-82566930 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAAATACCTAGAT+GGG | + | chr3.3:82565571-82565590 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCAAATACCTAGA+TGG | + | chr3.3:82565572-82565591 | None:intergenic | 20.0% |
| ! | AAATACACAGAAAAAGTGAT+AGG | - | chr3.3:82565164-82565183 | MS.gene020444:CDS | 25.0% |
| ! | AAGATAAGGAATGAAAGAAA+TGG | - | chr3.3:82567235-82567254 | MS.gene020444:intron | 25.0% |
| ! | AATACACAGAAAAAGTGATA+GGG | - | chr3.3:82565165-82565184 | MS.gene020444:CDS | 25.0% |
| ! | AATCTGAGTCATAATAAACT+TGG | - | chr3.3:82568309-82568328 | MS.gene020444:CDS | 25.0% |
| ! | ACACACTTCAAAAGTAATTT+GGG | + | chr3.3:82566539-82566558 | None:intergenic | 25.0% |
| ! | AGAAAAGTTTATGCTGAAAT+AGG | - | chr3.3:82567304-82567323 | MS.gene020444:intron | 25.0% |
| ! | AGGGATAAATATTTAACCTT+CGG | + | chr3.3:82565028-82565047 | None:intergenic | 25.0% |
| ! | ATTTAAAAGTTTAACCCTTC+TGG | - | chr3.3:82565686-82565705 | MS.gene020444:intron | 25.0% |
| ! | CAATATTCTCATTAAAGCTT+GGG | + | chr3.3:82568112-82568131 | None:intergenic | 25.0% |
| ! | CTAAGTCAAAGAATAAGATA+AGG | - | chr3.3:82567221-82567240 | MS.gene020444:intron | 25.0% |
| ! | CTGAAAAATTATCAATGGAA+TGG | + | chr3.3:82565968-82565987 | None:intergenic | 25.0% |
| ! | CTTCAAATGGATATCATTAT+GGG | - | chr3.3:82566506-82566525 | MS.gene020444:CDS | 25.0% |
| ! | GAAAAAATGTGTTAACAAGT+TGG | - | chr3.3:82567189-82567208 | MS.gene020444:intron | 25.0% |
| ! | GCATCAAATTGAAATATAAC+TGG | + | chr3.3:82566810-82566829 | None:intergenic | 25.0% |
| ! | GTATACAATGAGATTGTTTA+TGG | + | chr3.3:82565656-82565675 | None:intergenic | 25.0% |
| ! | TCAATATTCTCATTAAAGCT+TGG | + | chr3.3:82568113-82568132 | None:intergenic | 25.0% |
| ! | TCTTCAAATGGATATCATTA+TGG | - | chr3.3:82566505-82566524 | MS.gene020444:CDS | 25.0% |
| ! | TGGTATGGTTAATAATCAAT+TGG | - | chr3.3:82565600-82565619 | MS.gene020444:intron | 25.0% |
| ! | TTCAAATGGATATCATTATG+GGG | - | chr3.3:82566507-82566526 | MS.gene020444:CDS | 25.0% |
| !! | AAACTTTTAAATGCAAGCAA+CGG | + | chr3.3:82565678-82565697 | None:intergenic | 25.0% |
| !! | CTATAAAAGCATAGTACATA+TGG | + | chr3.3:82565827-82565846 | None:intergenic | 25.0% |
| !! | TCCCTTTTGATAAAAAGAAA+AGG | - | chr3.3:82565043-82565062 | MS.gene020444:intron | 25.0% |
| !! | TCTCAAAGAATGTAATTTGT+TGG | + | chr3.3:82565898-82565917 | None:intergenic | 25.0% |
| !! | TTGCAAAACCTTTTCTTTAT+GGG | + | chr3.3:82566035-82566054 | None:intergenic | 25.0% |
| !!! | CTTTGAGATTTTGTTTAATG+TGG | - | chr3.3:82565910-82565929 | MS.gene020444:intron | 25.0% |
| !!! | GATTTTCTGTGATTTTAATC+TGG | - | chr3.3:82567115-82567134 | MS.gene020444:intron | 25.0% |
| !!! | GGAGAATATTTTTGAGTTAA+TGG | - | chr3.3:82567371-82567390 | MS.gene020444:intron | 25.0% |
| !!! | GTTATTTTGTATTGTTTAGG+TGG | - | chr3.3:82564851-82564870 | MS.gene020444:intron | 25.0% |
| !!! | TTCTCCATCATCTAATTTTT+TGG | + | chr3.3:82567357-82567376 | None:intergenic | 25.0% |
| AAAGGAATTTGCAATTTGAG+AGG | - | chr3.3:82565061-82565080 | MS.gene020444:intron | 30.0% | |
| AAATCTATCATTGTCACGAA+TGG | - | chr3.3:82567853-82567872 | MS.gene020444:CDS | 30.0% | |
| AAATTATAGTGGTGTTTGAG+TGG | + | chr3.3:82567995-82568014 | None:intergenic | 30.0% | |
| AACACATTCTCTATACTACA+AGG | - | chr3.3:82566982-82567001 | MS.gene020444:CDS | 30.0% | |
| AATACTTCAGTATGTGCTAA+AGG | + | chr3.3:82568450-82568469 | None:intergenic | 30.0% | |
| AATATTTCTTGCAATGAGCT+AGG | - | chr3.3:82568384-82568403 | MS.gene020444:CDS | 30.0% | |
| AATCTATCATTGTCACGAAT+GGG | - | chr3.3:82567854-82567873 | MS.gene020444:CDS | 30.0% | |
| AATGAACTTCGATCAATTGA+AGG | - | chr3.3:82567923-82567942 | MS.gene020444:intron | 30.0% | |
| AATTGGAAGTTGTTGGAATA+TGG | + | chr3.3:82566684-82566703 | None:intergenic | 30.0% | |
| ACTAATGAAAATATCCGATG+AGG | - | chr3.3:82565133-82565152 | MS.gene020444:CDS | 30.0% | |
| ACTTCAAAAGTAATTTGGGA+AGG | + | chr3.3:82566535-82566554 | None:intergenic | 30.0% | |
| ATACACAGAAAAAGTGATAG+GGG | - | chr3.3:82565166-82565185 | MS.gene020444:CDS | 30.0% | |
| ATACTAGTTATGTGTGTCTA+CGG | - | chr3.3:82567825-82567844 | MS.gene020444:CDS | 30.0% | |
| ATATGGGAAAAGAACTTACT+AGG | + | chr3.3:82566784-82566803 | None:intergenic | 30.0% | |
| ATATTCCAACAACTTCCAAT+TGG | - | chr3.3:82566683-82566702 | MS.gene020444:CDS | 30.0% | |
| ATCATGATCATTCAAGATCT+TGG | + | chr3.3:82565717-82565736 | None:intergenic | 30.0% | |
| CAATGACATAGAACATTGTT+CGG | + | chr3.3:82564810-82564829 | None:intergenic | 30.0% | |
| CACACACTTCAAAAGTAATT+TGG | + | chr3.3:82566540-82566559 | None:intergenic | 30.0% | |
| CTAAAATTGCCAAAAGTGAT+AGG | + | chr3.3:82568200-82568219 | None:intergenic | 30.0% | |
| CTGGTTATGAGAAAAAAAAG+TGG | - | chr3.3:82567519-82567538 | MS.gene020444:intron | 30.0% | |
| GTACCTAAACATTGGAAATA+TGG | - | chr3.3:82566420-82566439 | MS.gene020444:CDS | 30.0% | |
| TAAACAAGATAGAAGTTGCA+TGG | + | chr3.3:82568289-82568308 | None:intergenic | 30.0% | |
| TATTTATGCGTGATAAGTTG+TGG | - | chr3.3:82565514-82565533 | MS.gene020444:intron | 30.0% | |
| TATTTCAATCAAGCAGTTGA+AGG | - | chr3.3:82566292-82566311 | MS.gene020444:CDS | 30.0% | |
| TCTGGATATGAGAAAAAATG+TGG | - | chr3.3:82567133-82567152 | MS.gene020444:intron | 30.0% | |
| TCTTTATAGTAGTGGCAATA+TGG | + | chr3.3:82567791-82567810 | None:intergenic | 30.0% | |
| TGTTAAATCTGAACTCTTGA+AGG | - | chr3.3:82566336-82566355 | MS.gene020444:CDS | 30.0% | |
| TTCTATGTCATTGCAAAATG+TGG | - | chr3.3:82564817-82564836 | MS.gene020444:intron | 30.0% | |
| TTCTTTATGGGAAAATCCTT+CGG | + | chr3.3:82566023-82566042 | None:intergenic | 30.0% | |
| TTGTAGTATAGAGAATGTGT+TGG | + | chr3.3:82566983-82567002 | None:intergenic | 30.0% | |
| ! | AAGAAGAATTTCAAGTCCTA+TGG | - | chr3.3:82564885-82564904 | MS.gene020444:intron | 30.0% |
| ! | ACGGGTATTTTATCTTCAAA+TGG | - | chr3.3:82566493-82566512 | MS.gene020444:CDS | 30.0% |
| ! | AGGATTTTCCCATAAAGAAA+AGG | - | chr3.3:82566024-82566043 | MS.gene020444:CDS | 30.0% |
| ! | CTTGCAAAACCTTTTCTTTA+TGG | + | chr3.3:82566036-82566055 | None:intergenic | 30.0% |
| ! | TAAAGAAAAGGTTTTGCAAG+AGG | - | chr3.3:82566036-82566055 | MS.gene020444:CDS | 30.0% |
| ! | TATCATTGCTTCTAAGAAGT+TGG | - | chr3.3:82568224-82568243 | MS.gene020444:intron | 30.0% |
| !! | ATTTTAGTAATTACTCTGCG+TGG | - | chr3.3:82565192-82565211 | MS.gene020444:CDS | 30.0% |
| !! | CATATATTTTGGACATGTAC+TGG | - | chr3.3:82565491-82565510 | MS.gene020444:intron | 30.0% |
| !! | GTCTTTTGAGAATTTACTGT+GGG | - | chr3.3:82567877-82567896 | MS.gene020444:CDS | 30.0% |
| !! | TAGAGGAGAATCATTTTTCA+CGG | + | chr3.3:82566146-82566165 | None:intergenic | 30.0% |
| !! | TTATAGTGCCACTAAGTTTT+GGG | - | chr3.3:82568503-82568522 | MS.gene020444:intron | 30.0% |
| !! | TTGACTGATTTGAACATATC+AGG | - | chr3.3:82568555-82568574 | MS.gene020444:CDS | 30.0% |
| !!! | TGACACTGAATTTTTTGACA+GGG | - | chr3.3:82568256-82568275 | MS.gene020444:intron | 30.0% |
| AACGGTGATCTCTATAGAAT+AGG | + | chr3.3:82566464-82566483 | None:intergenic | 35.0% | |
| AATGGAAACAACTACCTACA+TGG | - | chr3.3:82566208-82566227 | MS.gene020444:intron | 35.0% | |
| ATCTATCATTGTCACGAATG+GGG | - | chr3.3:82567855-82567874 | MS.gene020444:CDS | 35.0% | |
| ATGGTGATTAGTAGATACAG+CGG | + | chr3.3:82566665-82566684 | None:intergenic | 35.0% | |
| CAATTGATCGAAGTTCATTG+TGG | + | chr3.3:82567922-82567941 | None:intergenic | 35.0% | |
| CTGATAATTTACTCCTTCTG+TGG | - | chr3.3:82567489-82567508 | MS.gene020444:intron | 35.0% | |
| CTGATCAAAGAGAGATGTAA+CGG | + | chr3.3:82564698-82564717 | None:intergenic | 35.0% | |
| GATTCATCTTCTTCCTTCAA+CGG | + | chr3.3:82564384-82564403 | None:intergenic | 35.0% | |
| GCAAAATGTGGAATTGTGAT+TGG | - | chr3.3:82564829-82564848 | MS.gene020444:intron | 35.0% | |
| GCACGCTGAAAAATTATCAA+TGG | + | chr3.3:82565973-82565992 | None:intergenic | 35.0% | |
| GCTCCATATTTCCAATGTTT+AGG | + | chr3.3:82566426-82566445 | None:intergenic | 35.0% | |
| GTAAAGCTTGAGAACTTCTT+CGG | + | chr3.3:82566939-82566958 | None:intergenic | 35.0% | |
| GTATTTCAACTCATCCTCAT+CGG | + | chr3.3:82565150-82565169 | None:intergenic | 35.0% | |
| GTTATATTAGCTCCATGAGA+TGG | + | chr3.3:82566184-82566203 | None:intergenic | 35.0% | |
| TATTCTATAGAGATCACCGT+TGG | - | chr3.3:82566463-82566482 | MS.gene020444:CDS | 35.0% | |
| TCAATCTGAGAATTCAAGCT+CGG | + | chr3.3:82567570-82567589 | None:intergenic | 35.0% | |
| TCAGCAGATCATTATAGTGA+TGG | - | chr3.3:82565247-82565266 | MS.gene020444:intron | 35.0% | |
| TCATTTAAGCACTTCAGAGT+AGG | + | chr3.3:82568630-82568649 | None:intergenic | 35.0% | |
| TCTTGAAGGAAGATCTTGTT+TGG | - | chr3.3:82566350-82566369 | MS.gene020444:CDS | 35.0% | |
| TGCATGGCATCATAGAAAAT+GGG | - | chr3.3:82564908-82564927 | MS.gene020444:intron | 35.0% | |
| TGCCACAAAGGATTTCAAAA+CGG | + | chr3.3:82568482-82568501 | None:intergenic | 35.0% | |
| TTATCTAAAAGAAAGGCCGA+AGG | - | chr3.3:82566004-82566023 | MS.gene020444:CDS | 35.0% | |
| TTGAGAGAGATTGTGTTGAA+CGG | + | chr3.3:82564662-82564681 | None:intergenic | 35.0% | |
| ! | AAAGAACGTACATGCGATTT+TGG | + | chr3.3:82564467-82564486 | None:intergenic | 35.0% |
| ! | AAAGAGAGATGTAACGGAAT+CGG | + | chr3.3:82564692-82564711 | None:intergenic | 35.0% |
| ! | ACATACTGAAGTATTTGCCT+GGG | - | chr3.3:82568455-82568474 | MS.gene020444:intron | 35.0% |
| ! | GCTCAAATCTAAAGCTTCTT+TGG | + | chr3.3:82564581-82564600 | None:intergenic | 35.0% |
| ! | TAGGTAGTTGTTTCCATTCA+GGG | + | chr3.3:82566206-82566225 | None:intergenic | 35.0% |
| !! | AATCTTCTAGAATGCTCCAA+AGG | + | chr3.3:82565632-82565651 | None:intergenic | 35.0% |
| !! | ACTTGGTAGTTTTACTGCTT+TGG | - | chr3.3:82568326-82568345 | MS.gene020444:CDS | 35.0% |
| !! | CTTGGTAGTTTTACTGCTTT+GGG | - | chr3.3:82568327-82568346 | MS.gene020444:CDS | 35.0% |
| !! | GGTCTTTTGAGAATTTACTG+TGG | - | chr3.3:82567876-82567895 | MS.gene020444:CDS | 35.0% |
| !! | GTTATAGTGCCACTAAGTTT+TGG | - | chr3.3:82568502-82568521 | MS.gene020444:intron | 35.0% |
| !! | TTGGTAGTTTTACTGCTTTG+GGG | - | chr3.3:82568328-82568347 | MS.gene020444:CDS | 35.0% |
| !!! | ACTGAATTTTTTGACAGGGT+TGG | - | chr3.3:82568260-82568279 | MS.gene020444:intron | 35.0% |
| !!! | CATTTTTTCAAGCACAGAGT+TGG | + | chr3.3:82567178-82567197 | None:intergenic | 35.0% |
| !!! | CTGACACTGAATTTTTTGAC+AGG | - | chr3.3:82568255-82568274 | MS.gene020444:intron | 35.0% |
| !!! | GTGGTTGGTTTTATCATCTT+TGG | - | chr3.3:82566107-82566126 | MS.gene020444:CDS | 35.0% |
| AAAGAACTTACTAGGTGGCA+TGG | + | chr3.3:82566776-82566795 | None:intergenic | 40.0% | |
| AAAGCATAGTACATATGGCC+TGG | + | chr3.3:82565822-82565841 | None:intergenic | 40.0% | |
| AACAACTACCTACATGGTTC+TGG | - | chr3.3:82566214-82566233 | MS.gene020444:intron | 40.0% | |
| AACAACTTCCAATTGGTGCA+TGG | - | chr3.3:82566690-82566709 | MS.gene020444:CDS | 40.0% | |
| AACCAGAAGAAAACCACAGA+AGG | + | chr3.3:82567505-82567524 | None:intergenic | 40.0% | |
| AAGGCGCAATTCATTATCTG+TGG | + | chr3.3:82564955-82564974 | None:intergenic | 40.0% | |
| AATACCCGTAGAATGTCCAA+CGG | + | chr3.3:82566482-82566501 | None:intergenic | 40.0% | |
| AATCAATTGGCTGCTACCTT+TGG | - | chr3.3:82565613-82565632 | MS.gene020444:intron | 40.0% | |
| AGAAAATGGGTGCTTAGCAA+GGG | - | chr3.3:82564921-82564940 | MS.gene020444:intron | 40.0% | |
| AGAGATGTTTCAACAGTGCA+AGG | - | chr3.3:82565763-82565782 | MS.gene020444:intron | 40.0% | |
| AGATAATGAATTGCGCCTTC+TGG | - | chr3.3:82564956-82564975 | MS.gene020444:intron | 40.0% | |
| AGCACAGTCTGGTATTACTT+CGG | - | chr3.3:82567008-82567027 | MS.gene020444:CDS | 40.0% | |
| AGCGTTATTATTACTGGGTG+TGG | - | chr3.3:82568015-82568034 | MS.gene020444:CDS | 40.0% | |
| ATCCAGAATGTTACACAGCT+TGG | - | chr3.3:82564620-82564639 | MS.gene020444:CDS | 40.0% | |
| ATCGAAGTTCATTGTGGCTA+AGG | + | chr3.3:82567916-82567935 | None:intergenic | 40.0% | |
| ATGCACCAATTGGAAGTTGT+TGG | + | chr3.3:82566691-82566710 | None:intergenic | 40.0% | |
| ATTACTCTGCGTGGCATAAT+AGG | - | chr3.3:82565201-82565220 | MS.gene020444:CDS | 40.0% | |
| ATTCAGATGATCAGAGTGGT+TGG | - | chr3.3:82566092-82566111 | MS.gene020444:CDS | 40.0% | |
| CAACAGTGCAAGGAAGTTTA+TGG | - | chr3.3:82565773-82565792 | MS.gene020444:intron | 40.0% | |
| CAATTCTACAATTGTGCGCA+GGG | + | chr3.3:82567422-82567441 | None:intergenic | 40.0% | |
| CGTTACATCTCTCTTTGATC+AGG | - | chr3.3:82564696-82564715 | MS.gene020444:CDS | 40.0% | |
| CTCGAGTTATTCGTAGAAAG+TGG | + | chr3.3:82566379-82566398 | None:intergenic | 40.0% | |
| CTGATGCGTCTTTATAGTAG+TGG | + | chr3.3:82567799-82567818 | None:intergenic | 40.0% | |
| GAAAGCTTCCCAAAACTTAG+TGG | + | chr3.3:82568514-82568533 | None:intergenic | 40.0% | |
| GGAGCTAATATAACCCTGAA+TGG | - | chr3.3:82566190-82566209 | MS.gene020444:intron | 40.0% | |
| GTGCATGGCATCATAGAAAA+TGG | - | chr3.3:82564907-82564926 | MS.gene020444:intron | 40.0% | |
| TAAGTTGTGGACAACAACAG+TGG | - | chr3.3:82565527-82565546 | MS.gene020444:intron | 40.0% | |
| TAGAAAATGGGTGCTTAGCA+AGG | - | chr3.3:82564920-82564939 | MS.gene020444:intron | 40.0% | |
| TATAGTGGTGTTTGAGTGGA+GGG | + | chr3.3:82567991-82568010 | None:intergenic | 40.0% | |
| TCAAATACCTAGATGGGTGT+AGG | + | chr3.3:82565565-82565584 | None:intergenic | 40.0% | |
| TGGCTGTCTGAATTTCTGAT+GGG | - | chr3.3:82567440-82567459 | MS.gene020444:intron | 40.0% | |
| TGGGAAAAGAACTTACTAGG+TGG | + | chr3.3:82566781-82566800 | None:intergenic | 40.0% | |
| TTATAGTGGTGTTTGAGTGG+AGG | + | chr3.3:82567992-82568011 | None:intergenic | 40.0% | |
| TTCCAAGCTGTGTAACATTC+TGG | + | chr3.3:82564625-82564644 | None:intergenic | 40.0% | |
| TTGGCTGTCTGAATTTCTGA+TGG | - | chr3.3:82567439-82567458 | MS.gene020444:intron | 40.0% | |
| ! | AACGTGGAAAGTTGACTTCA+TGG | - | chr3.3:82566593-82566612 | MS.gene020444:CDS | 40.0% |
| ! | ACTGATTCAGATGATCAGAG+TGG | - | chr3.3:82566088-82566107 | MS.gene020444:CDS | 40.0% |
| ! | AGATGTAACGGAATCGGAAT+CGG | + | chr3.3:82564686-82564705 | None:intergenic | 40.0% |
| ! | ATTTCAAGTCCTATGGTGCA+TGG | - | chr3.3:82564892-82564911 | MS.gene020444:intron | 40.0% |
| ! | ATTTTCAGAAGGCTGATGCA+CGG | - | chr3.3:82564982-82565001 | MS.gene020444:intron | 40.0% |
| ! | CACATACTGAAGTATTTGCC+TGG | - | chr3.3:82568454-82568473 | MS.gene020444:intron | 40.0% |
| ! | CCTTCTGAAAATCATCCAGA+AGG | + | chr3.3:82564974-82564993 | None:intergenic | 40.0% |
| ! | CCTTCTGGATGATTTTCAGA+AGG | - | chr3.3:82564971-82564990 | MS.gene020444:intron | 40.0% |
| ! | GCTTCTAAGAAGTTGGAAGA+GGG | - | chr3.3:82568231-82568250 | MS.gene020444:intron | 40.0% |
| ! | GTAGGTAGTTGTTTCCATTC+AGG | + | chr3.3:82566207-82566226 | None:intergenic | 40.0% |
| ! | TCCACGTTTCCTATCACTTT+TGG | - | chr3.3:82568188-82568207 | MS.gene020444:intron | 40.0% |
| ! | TGCTTCTAAGAAGTTGGAAG+AGG | - | chr3.3:82568230-82568249 | MS.gene020444:intron | 40.0% |
| ! | TGGAAAGTTGACTTCATGGA+AGG | - | chr3.3:82566597-82566616 | MS.gene020444:CDS | 40.0% |
| !! | AAGCTTGGGTTAGCAAAAAG+TGG | + | chr3.3:82568098-82568117 | None:intergenic | 40.0% |
| !! | GTACATGCGATTTTGGTGAT+TGG | + | chr3.3:82564460-82564479 | None:intergenic | 40.0% |
| !!! | GAATTTTTTGACAGGGTTGG+AGG | - | chr3.3:82568263-82568282 | MS.gene020444:intron | 40.0% |
| !!! | GACCGTTTTGAAATCCTTTG+TGG | - | chr3.3:82568477-82568496 | MS.gene020444:intron | 40.0% |
| AACTTCCAATTGGTGCATGG+AGG | - | chr3.3:82566693-82566712 | MS.gene020444:CDS | 45.0% | |
| AAGGATTTCAAAACGGTCCC+AGG | + | chr3.3:82568475-82568494 | None:intergenic | 45.0% | |
| AATTGCCTCCATGCACCAAT+TGG | + | chr3.3:82566701-82566720 | None:intergenic | 45.0% | |
| AGGTGTGAACTCATCTACAG+TGG | - | chr3.3:82566312-82566331 | MS.gene020444:CDS | 45.0% | |
| ATCACCGTTGGACATTCTAC+GGG | - | chr3.3:82566475-82566494 | MS.gene020444:CDS | 45.0% | |
| CCAATTCTACAATTGTGCGC+AGG | + | chr3.3:82567423-82567442 | None:intergenic | 45.0% | |
| CCTGCGCACAATTGTAGAAT+TGG | - | chr3.3:82567420-82567439 | MS.gene020444:intron | 45.0% | |
| CTCATACAGAACCTGTTGAC+GGG | - | chr3.3:82566569-82566588 | MS.gene020444:CDS | 45.0% | |
| CTCCTCTACTCGTTTCATCT+TGG | - | chr3.3:82566158-82566177 | MS.gene020444:intron | 45.0% | |
| CTTTGATCAGGAGCTCAAAC+TGG | - | chr3.3:82564708-82564727 | MS.gene020444:CDS | 45.0% | |
| GAAAATGGGTGCTTAGCAAG+GGG | - | chr3.3:82564922-82564941 | MS.gene020444:intron | 45.0% | |
| GAGACAAACCAGAACCATGT+AGG | + | chr3.3:82566225-82566244 | None:intergenic | 45.0% | |
| GATCACCGTTGGACATTCTA+CGG | - | chr3.3:82566474-82566493 | MS.gene020444:CDS | 45.0% | |
| GCCAAAAGTGATAGGAAACG+TGG | + | chr3.3:82568192-82568211 | None:intergenic | 45.0% | |
| GCTCATACAGAACCTGTTGA+CGG | - | chr3.3:82566568-82566587 | MS.gene020444:CDS | 45.0% | |
| GTCATGTGTGTACTACATCC+AGG | - | chr3.3:82565801-82565820 | MS.gene020444:intron | 45.0% | |
| GTGCGCAGGGCATAAATTAT+AGG | + | chr3.3:82567409-82567428 | None:intergenic | 45.0% | |
| GTTTCATCTTGGCCATCTCA+TGG | - | chr3.3:82566169-82566188 | MS.gene020444:intron | 45.0% | |
| TCTATGATGCCATGCACCAT+AGG | + | chr3.3:82564904-82564923 | None:intergenic | 45.0% | |
| TGGATCCAACTTCATCAGCT+CGG | + | chr3.3:82566963-82566982 | None:intergenic | 45.0% | |
| TGGCACTATAACTGCCACAA+AGG | + | chr3.3:82568494-82568513 | None:intergenic | 45.0% | |
| TGGGTCGTGTACCTAAACAT+TGG | - | chr3.3:82566412-82566431 | MS.gene020444:CDS | 45.0% | |
| TTACACCGAGCTGATGAAGT+TGG | - | chr3.3:82566955-82566974 | MS.gene020444:CDS | 45.0% | |
| TTATCAGTCGTGCATGTACG+AGG | + | chr3.3:82567476-82567495 | None:intergenic | 45.0% | |
| TTCAAGATTCGCTGTCAGAC+TGG | - | chr3.3:82566740-82566759 | MS.gene020444:CDS | 45.0% | |
| TTCACGCTTGGAATTACCGA+AGG | - | chr3.3:82565009-82565028 | MS.gene020444:intron | 45.0% | |
| ! | ACTCGAGTACTGCTCAAGTT+TGG | - | chr3.3:82566392-82566411 | MS.gene020444:CDS | 45.0% |
| ! | ATGCACGGAATTTTCACGCT+TGG | - | chr3.3:82564997-82565016 | MS.gene020444:intron | 45.0% |
| ! | CTCCTTCTGTGGTTTTCTTC+TGG | - | chr3.3:82567500-82567519 | MS.gene020444:intron | 45.0% |
| ! | CTCGAGTACTGCTCAAGTTT+GGG | - | chr3.3:82566393-82566412 | MS.gene020444:CDS | 45.0% |
| !! | AAGATCTTGGAAGCACCAGA+AGG | + | chr3.3:82565704-82565723 | None:intergenic | 45.0% |
| !! | AGATCTTGGAAGCACCAGAA+GGG | + | chr3.3:82565703-82565722 | None:intergenic | 45.0% |
| !! | TGAGTTAATGGGCTGTGACA+GGG | - | chr3.3:82567383-82567402 | MS.gene020444:intron | 45.0% |
| !! | TTGAGTTAATGGGCTGTGAC+AGG | - | chr3.3:82567382-82567401 | MS.gene020444:intron | 45.0% |
| ACTCTGCGTGGCATAATAGG+AGG | - | chr3.3:82565204-82565223 | MS.gene020444:CDS | 50.0% | |
| CAGTCTGGTATTACTTCGGC+AGG | - | chr3.3:82567012-82567031 | MS.gene020444:CDS | 50.0% | |
| CTACAAGGATGAGCACAGTC+TGG | - | chr3.3:82566997-82567016 | MS.gene020444:CDS | 50.0% | |
| GACAGCAGGATCAAGCACAA+TGG | + | chr3.3:82568064-82568083 | None:intergenic | 50.0% | |
| GATTCGCTGTCAGACTGGTA+TGG | - | chr3.3:82566745-82566764 | MS.gene020444:CDS | 50.0% | |
| GGCCAAGATGAAACGAGTAG+AGG | + | chr3.3:82566163-82566182 | None:intergenic | 50.0% | |
| GGTGTTTGAGTGGAGGGAAA+AGG | + | chr3.3:82567985-82568004 | None:intergenic | 50.0% | |
| TCTTCCTTCAACGGTTTGCG+AGG | + | chr3.3:82564375-82564394 | None:intergenic | 50.0% | |
| TGGATAACTTGAGCGACAGC+AGG | + | chr3.3:82568078-82568097 | None:intergenic | 50.0% | |
| TTGCATGCCTACACCCATCT+AGG | - | chr3.3:82565555-82565574 | MS.gene020444:intron | 50.0% | |
| ! | GTGCTAAAGGCGAAGAGCAT+AGG | + | chr3.3:82568437-82568456 | None:intergenic | 50.0% |
| !! | TGCGATTTTGGTGATTGGCG+AGG | + | chr3.3:82564455-82564474 | None:intergenic | 50.0% |
| TCGACCTCGCAAACCGTTGA+AGG | - | chr3.3:82564368-82564387 | MS.gene020444:CDS | 55.0% | |
| TCGCTGTCAGACTGGTATGG+TGG | - | chr3.3:82566748-82566767 | MS.gene020444:CDS | 55.0% | |
| TTTCCACGTTGCCCGTCAAC+AGG | + | chr3.3:82566583-82566602 | None:intergenic | 55.0% | |
| ! | GAACCTGTTGACGGGCAACG+TGG | - | chr3.3:82566577-82566596 | MS.gene020444:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 82564360 | 82568662 | 82564360 | ID=MS.gene020444 |
| chr3.3 | mRNA | 82564360 | 82568662 | 82564360 | ID=MS.gene020444.t1;Parent=MS.gene020444 |
| chr3.3 | exon | 82568547 | 82568662 | 82568547 | ID=MS.gene020444.t1.exon1;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82568547 | 82568662 | 82568547 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82568293 | 82568449 | 82568293 | ID=MS.gene020444.t1.exon2;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82568293 | 82568449 | 82568293 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82567992 | 82568152 | 82567992 | ID=MS.gene020444.t1.exon3;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82567992 | 82568152 | 82567992 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82567797 | 82567901 | 82567797 | ID=MS.gene020444.t1.exon4;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82567797 | 82567901 | 82567797 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82566261 | 82567034 | 82566261 | ID=MS.gene020444.t1.exon5;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82566261 | 82567034 | 82566261 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82565989 | 82566169 | 82565989 | ID=MS.gene020444.t1.exon6;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82565989 | 82566169 | 82565989 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82565078 | 82565261 | 82565078 | ID=MS.gene020444.t1.exon7;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82565078 | 82565261 | 82565078 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| chr3.3 | exon | 82564360 | 82564745 | 82564360 | ID=MS.gene020444.t1.exon8;Parent=MS.gene020444.t1 |
| chr3.3 | CDS | 82564360 | 82564745 | 82564360 | ID=cds.MS.gene020444.t1;Parent=MS.gene020444.t1 |
| Gene Sequence |
| Protein sequence |
