Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021818.t1 | XP_003621371.1 | 99.2 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 6.80E-61 | 243 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021818.t1 | Q75GT2 | 65.5 | 119 | 36 | 3 | 3 | 119 | 4 | 119 | 7.7e-37 | 154.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021818.t1 | G7L472 | 99.2 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 4.9e-61 | 243.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021818 | MS.gene86087 | PPI |
| MS.gene97583 | MS.gene021818 | PPI |
| MS.gene021818 | MS.gene057527 | PPI |
| MS.gene45247 | MS.gene021818 | PPI |
| MS.gene031139 | MS.gene021818 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021818.t1 | MTR_7g012560 | 99.160 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 4.94e-85 | 243 |
| MS.gene021818.t1 | MTR_7g012560 | 100.000 | 101 | 0 | 0 | 1 | 101 | 1 | 101 | 2.80e-71 | 208 |
| MS.gene021818.t1 | MTR_6g013820 | 76.471 | 119 | 26 | 1 | 1 | 119 | 1 | 117 | 1.71e-60 | 181 |
| MS.gene021818.t1 | MTR_7g027300 | 51.695 | 118 | 53 | 2 | 4 | 119 | 3 | 118 | 1.74e-37 | 123 |
| MS.gene021818.t1 | MTR_7g027017 | 58.242 | 91 | 36 | 1 | 6 | 96 | 5 | 93 | 6.98e-32 | 114 |
| MS.gene021818.t1 | MTR_8g096380 | 45.299 | 117 | 60 | 2 | 5 | 119 | 4 | 118 | 1.86e-31 | 108 |
| MS.gene021818.t1 | MTR_7g108180 | 40.678 | 118 | 65 | 4 | 1 | 116 | 1 | 115 | 8.52e-27 | 96.3 |
| MS.gene021818.t1 | MTR_8g096390 | 41.026 | 117 | 60 | 4 | 5 | 119 | 4 | 113 | 7.85e-23 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021818.t1 | AT3G01050 | 53.782 | 119 | 53 | 1 | 1 | 119 | 1 | 117 | 5.41e-45 | 142 |
| MS.gene021818.t1 | AT3G01050 | 53.782 | 119 | 53 | 1 | 1 | 119 | 1 | 117 | 5.41e-45 | 142 |
| MS.gene021818.t1 | AT3G01050 | 53.782 | 119 | 53 | 1 | 1 | 119 | 1 | 117 | 5.41e-45 | 142 |
| MS.gene021818.t1 | AT3G01050 | 53.782 | 119 | 53 | 1 | 1 | 119 | 1 | 117 | 5.41e-45 | 142 |
| MS.gene021818.t1 | AT3G01050 | 53.782 | 119 | 53 | 1 | 1 | 119 | 1 | 117 | 5.41e-45 | 142 |
| MS.gene021818.t1 | AT5G15460 | 59.016 | 122 | 45 | 2 | 1 | 119 | 1 | 120 | 9.91e-44 | 139 |
| MS.gene021818.t1 | AT5G15460 | 59.016 | 122 | 45 | 2 | 1 | 119 | 1 | 120 | 9.91e-44 | 139 |
| MS.gene021818.t1 | AT5G15460 | 59.016 | 122 | 45 | 2 | 1 | 119 | 1 | 120 | 9.91e-44 | 139 |
| MS.gene021818.t1 | AT1G22050 | 49.587 | 121 | 57 | 3 | 1 | 119 | 1 | 119 | 4.13e-41 | 132 |
| MS.gene021818.t1 | AT1G77870 | 52.101 | 119 | 55 | 2 | 3 | 119 | 2 | 120 | 7.60e-39 | 127 |
| MS.gene021818.t1 | AT4G24990 | 48.718 | 117 | 56 | 2 | 5 | 119 | 4 | 118 | 1.58e-32 | 110 |
| MS.gene021818.t1 | AT4G24990 | 48.718 | 117 | 56 | 2 | 5 | 119 | 4 | 118 | 1.58e-32 | 110 |
| MS.gene021818.t1 | AT3G26980 | 45.833 | 120 | 59 | 3 | 4 | 119 | 3 | 120 | 5.74e-32 | 109 |
| MS.gene021818.t1 | AT5G15460 | 51.163 | 86 | 37 | 2 | 37 | 119 | 11 | 94 | 2.66e-19 | 76.6 |
Find 30 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGATCTCAAACTGTTCT+TGG | 0.235141 | 7.1:-83526693 | None:intergenic |
| CTCAAACTGTTCTTGGTTCC+CGG | 0.316859 | 7.1:-83526686 | None:intergenic |
| AGTGGCGGCAGGAAAACTTT+TGG | 0.362153 | 7.1:-83526746 | None:intergenic |
| CACATAAAGGGCTTTGGCTC+TGG | 0.376161 | 7.1:-83527998 | None:intergenic |
| TTGACGGATGGTTCTGATAT+CGG | 0.410506 | 7.1:+83526721 | MS.gene021818:CDS |
| GTACCAGGGGTATCACATAA+AGG | 0.432829 | 7.1:-83528011 | None:intergenic |
| AACAGTTTGAGATCAAGTTT+AGG | 0.441071 | 7.1:+83526698 | MS.gene021818:CDS |
| CTTGGATCTCCGAGCATGAC+CGG | 0.442129 | 7.1:+83526667 | None:intergenic |
| TGAGATCAAGTTTAGGTTGA+CGG | 0.445292 | 7.1:+83526705 | MS.gene021818:CDS |
| AAGAAAGTATTCTTGCTCAA+TGG | 0.479119 | 7.1:+83526785 | MS.gene021818:CDS |
| TACCAGGGGTATCACATAAA+GGG | 0.490754 | 7.1:-83528010 | None:intergenic |
| ATTCTTGCTCAATGGCCAAA+AGG | 0.495557 | 7.1:+83526793 | MS.gene021818:CDS |
| GGGTATCACATAAAGGGCTT+TGG | 0.495798 | 7.1:-83528004 | None:intergenic |
| TGCATTGTTGTAACAGTACC+AGG | 0.498824 | 7.1:-83528026 | None:intergenic |
| ATGAGACCTTTGTCTGTAGT+AGG | 0.520288 | 7.1:-83528065 | None:intergenic |
| GATTTGAAGTTAATCAGTGC+AGG | 0.542038 | 7.1:+83527939 | MS.gene021818:CDS |
| TTTCAATGTTGCAATACTAG+TGG | 0.550833 | 7.1:-83526764 | None:intergenic |
| TTGGATCTCCGAGCATGACC+GGG | 0.551174 | 7.1:+83526668 | None:intergenic |
| ATCAAGTTTAGGTTGACGGA+TGG | 0.578278 | 7.1:+83526709 | MS.gene021818:CDS |
| CAATGTTGCAATACTAGTGG+CGG | 0.583009 | 7.1:-83526761 | None:intergenic |
| GTTGCAATACTAGTGGCGGC+AGG | 0.593429 | 7.1:-83526757 | None:intergenic |
| TTGGAGAACAACAAAACAGT+CGG | 0.627089 | 7.1:+83527969 | MS.gene021818:CDS |
| AGCCCTTTATGTGATACCCC+TGG | 0.627346 | 7.1:+83528008 | MS.gene021818:CDS |
| AGACCTTTGTCTGTAGTAGG+TGG | 0.637038 | 7.1:-83528062 | None:intergenic |
| CATTGTTGTAACAGTACCAG+GGG | 0.659317 | 7.1:-83528024 | None:intergenic |
| GATGCAGCACAGCACAAATG+TGG | 0.659452 | 7.1:+83528928 | MS.gene021818:CDS |
| CAACCACCTACTACAGACAA+AGG | 0.663273 | 7.1:+83528059 | MS.gene021818:CDS |
| GCATTGTTGTAACAGTACCA+GGG | 0.672978 | 7.1:-83528025 | None:intergenic |
| AAGATAAGGAGAATGTGCCA+AGG | 0.679109 | 7.1:+83527907 | MS.gene021818:intron |
| TACTGTTACAACAATGCATG+TGG | 0.701570 | 7.1:+83528031 | MS.gene021818:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATTAGAACT+AGG | - | chr7.1:83528114-83528133 | None:intergenic | 10.0% |
| !!! | TTTTCTATATTTTTAGTTTA+AGG | - | chr7.1:83527574-83527593 | None:intergenic | 10.0% |
| !! | CTAAAAATATAGAAAACAAT+AGG | + | chr7.1:83527578-83527597 | MS.gene021818:intron | 15.0% |
| !! | TTTCTTTAATCAAGTATATA+AGG | + | chr7.1:83527528-83527547 | MS.gene021818:intron | 15.0% |
| !!! | AATAATGGATAAATAAAACA+AGG | - | chr7.1:83528313-83528332 | None:intergenic | 15.0% |
| !!! | ATAATGGATAAATAAAACAA+GGG | - | chr7.1:83528312-83528331 | None:intergenic | 15.0% |
| !!! | ATTTTAGAAGATATATATTG+AGG | + | chr7.1:83527155-83527174 | MS.gene021818:intron | 15.0% |
| !!! | ATTTTTATATTGTCTGTTAT+TGG | - | chr7.1:83527252-83527271 | None:intergenic | 15.0% |
| !!! | GATAAATTATTCTTTTTCAA+AGG | + | chr7.1:83528159-83528178 | MS.gene021818:intron | 15.0% |
| !!! | TCTGATAAAAAATTTTAAGA+GGG | + | chr7.1:83527047-83527066 | MS.gene021818:intron | 15.0% |
| !!! | TCTTAAAATTTTTTATCAGA+GGG | - | chr7.1:83527047-83527066 | None:intergenic | 15.0% |
| !! | AGTTCAATTTACACAAATAA+TGG | - | chr7.1:83528328-83528347 | None:intergenic | 20.0% |
| !! | ATTCTAAACATCACATTAAA+TGG | - | chr7.1:83527323-83527342 | None:intergenic | 20.0% |
| !! | CATAATTAATATGTCAATCA+AGG | - | chr7.1:83528250-83528269 | None:intergenic | 20.0% |
| !! | TAATAATTAGAACTAGGATT+TGG | - | chr7.1:83528108-83528127 | None:intergenic | 20.0% |
| !! | TACAAGATAGTTAATGAAAA+CGG | + | chr7.1:83528503-83528522 | MS.gene021818:intron | 20.0% |
| !! | TGTTTAAAGAAGTAATATAC+TGG | - | chr7.1:83528682-83528701 | None:intergenic | 20.0% |
| !! | TTTAAACATGTTTATACTCT+GGG | + | chr7.1:83528694-83528713 | MS.gene021818:intron | 20.0% |
| !!! | CTCTGATAAAAAATTTTAAG+AGG | + | chr7.1:83527046-83527065 | MS.gene021818:intron | 20.0% |
| !!! | CTCTTAAAATTTTTTATCAG+AGG | - | chr7.1:83527048-83527067 | None:intergenic | 20.0% |
| !!! | CTGATAAAAAATTTTAAGAG+GGG | + | chr7.1:83527048-83527067 | MS.gene021818:intron | 20.0% |
| ! | AATAGATATAAGAACCATCA+GGG | + | chr7.1:83526953-83526972 | MS.gene021818:intron | 25.0% |
| ! | AGTGATAACTACATACTAAA+AGG | - | chr7.1:83527199-83527218 | None:intergenic | 25.0% |
| ! | ATATATATTGAGGATGTAGA+AGG | + | chr7.1:83527165-83527184 | MS.gene021818:intron | 25.0% |
| ! | CAAATCTGACATAGATAATT+TGG | - | chr7.1:83526878-83526897 | None:intergenic | 25.0% |
| ! | CTTTAAACATGTTTATACTC+TGG | + | chr7.1:83528693-83528712 | MS.gene021818:intron | 25.0% |
| ! | GCATAAAAGAAAAACTGTTT+AGG | + | chr7.1:83527504-83527523 | MS.gene021818:intron | 25.0% |
| ! | TAATAGATATAAGAACCATC+AGG | + | chr7.1:83526952-83526971 | MS.gene021818:intron | 25.0% |
| ! | TTAAACATGTTTATACTCTG+GGG | + | chr7.1:83528695-83528714 | MS.gene021818:intron | 25.0% |
| !! | GCATTTTATTAACACAAACT+CGG | - | chr7.1:83527476-83527495 | None:intergenic | 25.0% |
| !! | TTCAAATCTTTTATAGTCCT+TGG | - | chr7.1:83527927-83527946 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTATGCAGCAAA+TGG | - | chr7.1:83527498-83527517 | None:intergenic | 25.0% |
| !!! | CTTTTAAAATAGATGTCCTT+CGG | + | chr7.1:83527432-83527451 | MS.gene021818:intron | 25.0% |
| AAGAAACAGACAAGTAAATG+AGG | - | chr7.1:83527612-83527631 | None:intergenic | 30.0% | |
| AATCAGTGCAGGAAAAATAT+TGG | + | chr7.1:83527950-83527969 | MS.gene021818:CDS | 30.0% | |
| ACAATGTTTCTTACAACAAC+GGG | - | chr7.1:83526922-83526941 | None:intergenic | 30.0% | |
| AGAAACAGACAAGTAAATGA+GGG | - | chr7.1:83527611-83527630 | None:intergenic | 30.0% | |
| ATCCTGATTCAAGTAGTTTA+AGG | + | chr7.1:83527722-83527741 | MS.gene021818:intron | 30.0% | |
| ATTAAGCTAAAAACCCGAAA+AGG | - | chr7.1:83526853-83526872 | None:intergenic | 30.0% | |
| CACAATGTTTCTTACAACAA+CGG | - | chr7.1:83526923-83526942 | None:intergenic | 30.0% | |
| GAGAATAGTAATCTAAACAG+AGG | - | chr7.1:83528372-83528391 | None:intergenic | 30.0% | |
| GTAAATTTAAGAAGCAAGCA+TGG | - | chr7.1:83528799-83528818 | None:intergenic | 30.0% | |
| TAATGAGATCAGAGAAGAAA+AGG | + | chr7.1:83527282-83527301 | MS.gene021818:intron | 30.0% | |
| TGGAGCAATAGTTACATTTA+CGG | - | chr7.1:83527232-83527251 | None:intergenic | 30.0% | |
| TTAAGCTAAAAACCCGAAAA+GGG | - | chr7.1:83526852-83526871 | None:intergenic | 30.0% | |
| TTAATATGTCAATCAAGGAC+AGG | - | chr7.1:83528245-83528264 | None:intergenic | 30.0% | |
| TTGTATGCATTTATGTGCAA+AGG | + | chr7.1:83527392-83527411 | MS.gene021818:intron | 30.0% | |
| TTTCAATGTTGCAATACTAG+TGG | - | chr7.1:83526767-83526786 | None:intergenic | 30.0% | |
| ! | AACAGTTTGAGATCAAGTTT+AGG | + | chr7.1:83526698-83526717 | MS.gene021818:CDS | 30.0% |
| ! | ACACAAAACAACTAACCTTT+TGG | - | chr7.1:83526811-83526830 | None:intergenic | 30.0% |
| ! | TTAGTTTAAGGCTCTATTCT+AGG | - | chr7.1:83527562-83527581 | None:intergenic | 30.0% |
| !! | AAGAAAGTATTCTTGCTCAA+TGG | + | chr7.1:83526785-83526804 | MS.gene021818:CDS | 30.0% |
| !! | CACTATTTCTAAAACCGAAT+CGG | - | chr7.1:83527787-83527806 | None:intergenic | 30.0% |
| !! | TAAAAAATTTTAAGAGGGGC+AGG | + | chr7.1:83527052-83527071 | MS.gene021818:intron | 30.0% |
| !!! | TGTGTTGTGTTTTGAAGATA+AGG | + | chr7.1:83527893-83527912 | MS.gene021818:intron | 30.0% |
| ACTTGATCTCAAACTGTTCT+TGG | - | chr7.1:83526696-83526715 | None:intergenic | 35.0% | |
| AGTATCTACTTCATTTCCGA+AGG | - | chr7.1:83527451-83527470 | None:intergenic | 35.0% | |
| ATATACTGGATATGTCAAGC+TGG | - | chr7.1:83528668-83528687 | None:intergenic | 35.0% | |
| CTGATTCAAGTAGTTTAAGG+CGG | + | chr7.1:83527725-83527744 | MS.gene021818:intron | 35.0% | |
| GTCAAGCTGGTGAAATTTAA+TGG | - | chr7.1:83528655-83528674 | None:intergenic | 35.0% | |
| TACTGTTACAACAATGCATG+TGG | + | chr7.1:83528031-83528050 | MS.gene021818:CDS | 35.0% | |
| TATCTTCCATAAGCATATGC+AGG | - | chr7.1:83527370-83527389 | None:intergenic | 35.0% | |
| TTCCTTGACAGCTAAGTTAT+AGG | - | chr7.1:83528282-83528301 | None:intergenic | 35.0% | |
| TTGGAGAACAACAAAACAGT+CGG | + | chr7.1:83527969-83527988 | MS.gene021818:CDS | 35.0% | |
| ! | CTTAAGTTGCTTATCCAAAC+AGG | + | chr7.1:83528598-83528617 | MS.gene021818:intron | 35.0% |
| ! | GATTTGAAGTTAATCAGTGC+AGG | + | chr7.1:83527939-83527958 | MS.gene021818:CDS | 35.0% |
| ! | GCATTTATGTGCAAAGGTTT+TGG | + | chr7.1:83527398-83527417 | MS.gene021818:intron | 35.0% |
| ! | TTCTTTGTGCTTTCCCTTTT+CGG | + | chr7.1:83526836-83526855 | MS.gene021818:intron | 35.0% |
| !! | AATCGAACTTGTTATTGCAG+GGG | - | chr7.1:83527024-83527043 | None:intergenic | 35.0% |
| !! | GAATCGAACTTGTTATTGCA+GGG | - | chr7.1:83527025-83527044 | None:intergenic | 35.0% |
| !! | GTTTTGCTATAAGTCCTGTT+TGG | - | chr7.1:83528615-83528634 | None:intergenic | 35.0% |
| !! | TGAGATCAAGTTTAGGTTGA+CGG | + | chr7.1:83526705-83526724 | MS.gene021818:CDS | 35.0% |
| AACCGAATCGGACATCAAAT+TGG | - | chr7.1:83527775-83527794 | None:intergenic | 40.0% | |
| AAGATAAGGAGAATGTGCCA+AGG | + | chr7.1:83527907-83527926 | MS.gene021818:intron | 40.0% | |
| AAGGCGGTTGAACCATAATA+CGG | + | chr7.1:83527741-83527760 | MS.gene021818:intron | 40.0% | |
| ATGAGACCTTTGTCTGTAGT+AGG | - | chr7.1:83528068-83528087 | None:intergenic | 40.0% | |
| ATTCTTGCTCAATGGCCAAA+AGG | + | chr7.1:83526793-83526812 | MS.gene021818:CDS | 40.0% | |
| CAATGTTGCAATACTAGTGG+CGG | - | chr7.1:83526764-83526783 | None:intergenic | 40.0% | |
| CATTGTTGTAACAGTACCAG+GGG | - | chr7.1:83528027-83528046 | None:intergenic | 40.0% | |
| CGCCTTAAACTACTTGAATC+AGG | - | chr7.1:83527727-83527746 | None:intergenic | 40.0% | |
| CTCCAATTTGATGTCCGATT+CGG | + | chr7.1:83527770-83527789 | MS.gene021818:intron | 40.0% | |
| GAACTAGGATTTGGCATTGT+TGG | - | chr7.1:83528099-83528118 | None:intergenic | 40.0% | |
| GCATTGTTGTAACAGTACCA+GGG | - | chr7.1:83528028-83528047 | None:intergenic | 40.0% | |
| GTCCTATAACTTAGCTGTCA+AGG | + | chr7.1:83528277-83528296 | MS.gene021818:intron | 40.0% | |
| TCATCCGACACATATTGACA+TGG | + | chr7.1:83528864-83528883 | MS.gene021818:intron | 40.0% | |
| TCCACCATGTCAATATGTGT+CGG | - | chr7.1:83528871-83528890 | None:intergenic | 40.0% | |
| TGCATTGTTGTAACAGTACC+AGG | - | chr7.1:83528029-83528048 | None:intergenic | 40.0% | |
| TGCTATCCTGCATATGCTTA+TGG | + | chr7.1:83527361-83527380 | MS.gene021818:intron | 40.0% | |
| TTGACGGTCAAACCTTGAAT+CGG | + | chr7.1:83527657-83527676 | MS.gene021818:intron | 40.0% | |
| TTGGAGAGACTTCCGTATTA+TGG | - | chr7.1:83527756-83527775 | None:intergenic | 40.0% | |
| ! | ATTGGATGGATTCGAAAACC+AGG | + | chr7.1:83527082-83527101 | MS.gene021818:intron | 40.0% |
| ! | TCTTTGTGCTTTCCCTTTTC+GGG | + | chr7.1:83526837-83526856 | MS.gene021818:intron | 40.0% |
| !! | AAAATTTTAAGAGGGGCAGG+TGG | + | chr7.1:83527055-83527074 | MS.gene021818:intron | 40.0% |
| !! | ATCAAGTTTAGGTTGACGGA+TGG | + | chr7.1:83526709-83526728 | MS.gene021818:CDS | 40.0% |
| !! | CATGATCGTTTGAGGCTTTT+GGG | + | chr7.1:83527117-83527136 | MS.gene021818:intron | 40.0% |
| !! | GGAATCGAACTTGTTATTGC+AGG | - | chr7.1:83527026-83527045 | None:intergenic | 40.0% |
| !! | TACCAGGGGTATCACATAAA+GGG | - | chr7.1:83528013-83528032 | None:intergenic | 40.0% |
| !! | TTGACGGATGGTTCTGATAT+CGG | + | chr7.1:83526721-83526740 | MS.gene021818:CDS | 40.0% |
| !!! | GGCTTTTGGGTTTGATGTAT+TGG | + | chr7.1:83527130-83527149 | MS.gene021818:intron | 40.0% |
| AGACCTTTGTCTGTAGTAGG+TGG | - | chr7.1:83528065-83528084 | None:intergenic | 45.0% | |
| CAACCACCTACTACAGACAA+AGG | + | chr7.1:83528059-83528078 | MS.gene021818:CDS | 45.0% | |
| CTCAAACTGTTCTTGGTTCC+CGG | - | chr7.1:83526689-83526708 | None:intergenic | 45.0% | |
| GGGTATCACATAAAGGGCTT+TGG | - | chr7.1:83528007-83528026 | None:intergenic | 45.0% | |
| TCCGACACATATTGACATGG+TGG | + | chr7.1:83528867-83528886 | MS.gene021818:intron | 45.0% | |
| TTCGAAAACCAGGTGATAGC+AGG | + | chr7.1:83527092-83527111 | MS.gene021818:intron | 45.0% | |
| !! | ACTATAGTGACGCCGATTCA+AGG | - | chr7.1:83527672-83527691 | None:intergenic | 45.0% |
| !! | GCATGATCGTTTGAGGCTTT+TGG | + | chr7.1:83527116-83527135 | MS.gene021818:intron | 45.0% |
| !! | GTACCAGGGGTATCACATAA+AGG | - | chr7.1:83528014-83528033 | None:intergenic | 45.0% |
| AGCAGGTGCATGATCGTTTG+AGG | + | chr7.1:83527109-83527128 | MS.gene021818:intron | 50.0% | |
| AGCCCTTTATGTGATACCCC+TGG | + | chr7.1:83528008-83528027 | MS.gene021818:CDS | 50.0% | |
| ATCATGCACCTGCTATCACC+TGG | - | chr7.1:83527103-83527122 | None:intergenic | 50.0% | |
| GATGCAGCACAGCACAAATG+TGG | + | chr7.1:83528928-83528947 | MS.gene021818:CDS | 50.0% | |
| TCAAGGTTTGACCGTCAAGC+AGG | - | chr7.1:83527655-83527674 | None:intergenic | 50.0% | |
| TTCCTGACTGTCCTGCTTGA+CGG | + | chr7.1:83527641-83527660 | MS.gene021818:intron | 50.0% | |
| ! | AGTGGCGGCAGGAAAACTTT+TGG | - | chr7.1:83526749-83526768 | None:intergenic | 50.0% |
| ! | CACATAAAGGGCTTTGGCTC+TGG | - | chr7.1:83528001-83528020 | None:intergenic | 50.0% |
| ! | GTGGCGGCAGGAAAACTTTT+GGG | - | chr7.1:83526748-83526767 | None:intergenic | 50.0% |
| ! | TGGCGGCAGGAAAACTTTTG+GGG | - | chr7.1:83526747-83526766 | None:intergenic | 50.0% |
| AGAGGGGCAGGTGGTTTGAT+TGG | + | chr7.1:83527064-83527083 | MS.gene021818:intron | 55.0% | |
| CAGGGTCTAGTGCAAGTGGT+TGG | + | chr7.1:83526971-83526990 | MS.gene021818:intron | 55.0% | |
| CCACTTGCACTAGACCCTGA+TGG | - | chr7.1:83526970-83526989 | None:intergenic | 55.0% | |
| CCATCAGGGTCTAGTGCAAG+TGG | + | chr7.1:83526967-83526986 | MS.gene021818:intron | 55.0% | |
| GGGCAGGTGGTTTGATTGGA+TGG | + | chr7.1:83527068-83527087 | MS.gene021818:intron | 55.0% | |
| GTTGCAATACTAGTGGCGGC+AGG | - | chr7.1:83526760-83526779 | None:intergenic | 55.0% | |
| ! | AGTGCAAGTGGTTGGTGTGC+AGG | + | chr7.1:83526979-83526998 | MS.gene021818:intron | 55.0% |
| ! | GTGCAAGTGGTTGGTGTGCA+GGG | + | chr7.1:83526980-83526999 | MS.gene021818:intron | 55.0% |
| ! | TGCAAGTGGTTGGTGTGCAG+GGG | + | chr7.1:83526981-83527000 | MS.gene021818:intron | 55.0% |
| GACCGTCAAGCAGGACAGTC+AGG | - | chr7.1:83527646-83527665 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 83526682 | 83528966 | 83526682 | ID=MS.gene021818 |
| chr7.1 | mRNA | 83526682 | 83528966 | 83526682 | ID=MS.gene021818.t1;Parent=MS.gene021818 |
| chr7.1 | exon | 83526682 | 83526814 | 83526682 | ID=MS.gene021818.t1.exon1;Parent=MS.gene021818.t1 |
| chr7.1 | CDS | 83526682 | 83526814 | 83526682 | ID=cds.MS.gene021818.t1;Parent=MS.gene021818.t1 |
| chr7.1 | exon | 83527910 | 83528080 | 83527910 | ID=MS.gene021818.t1.exon2;Parent=MS.gene021818.t1 |
| chr7.1 | CDS | 83527910 | 83528080 | 83527910 | ID=cds.MS.gene021818.t1;Parent=MS.gene021818.t1 |
| chr7.1 | exon | 83528911 | 83528966 | 83528911 | ID=MS.gene021818.t1.exon3;Parent=MS.gene021818.t1 |
| chr7.1 | CDS | 83528911 | 83528966 | 83528911 | ID=cds.MS.gene021818.t1;Parent=MS.gene021818.t1 |
| Gene Sequence |
| Protein sequence |
