Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057527.t1 | XP_003621371.1 | 85.4 | 137 | 2 | 1 | 1 | 137 | 1 | 119 | 4.00E-57 | 230.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057527.t1 | Q75GT2 | 57.0 | 135 | 39 | 3 | 3 | 137 | 4 | 119 | 8.3e-35 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057527.t1 | G7L472 | 85.4 | 137 | 2 | 1 | 1 | 137 | 1 | 119 | 2.9e-57 | 230.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057527 | MS.gene45247 | 0.843683 | 1.21E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97583 | MS.gene057527 | PPI |
| MS.gene45247 | MS.gene057527 | PPI |
| MS.gene021818 | MS.gene057527 | PPI |
| MS.gene057527 | MS.gene86087 | PPI |
| MS.gene031139 | MS.gene057527 | PPI |
| MS.gene86087 | MS.gene057527 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057527.t1 | MTR_7g012560 | 85.401 | 137 | 2 | 1 | 1 | 137 | 1 | 119 | 1.30e-79 | 230 |
| MS.gene057527.t1 | MTR_7g012560 | 96.190 | 105 | 4 | 0 | 1 | 105 | 1 | 105 | 1.35e-70 | 207 |
| MS.gene057527.t1 | MTR_6g013820 | 66.423 | 137 | 26 | 2 | 1 | 137 | 1 | 117 | 1.02e-55 | 170 |
| MS.gene057527.t1 | MTR_7g027300 | 45.522 | 134 | 55 | 2 | 4 | 137 | 3 | 118 | 1.02e-34 | 117 |
| MS.gene057527.t1 | MTR_7g027017 | 46.341 | 123 | 59 | 2 | 9 | 126 | 8 | 128 | 3.71e-31 | 113 |
| MS.gene057527.t1 | MTR_8g096380 | 52.174 | 92 | 42 | 1 | 5 | 96 | 4 | 93 | 4.17e-29 | 102 |
| MS.gene057527.t1 | MTR_7g108180 | 43.137 | 102 | 54 | 3 | 1 | 101 | 1 | 99 | 1.37e-24 | 91.3 |
| MS.gene057527.t1 | MTR_8g096390 | 45.556 | 90 | 45 | 2 | 5 | 92 | 4 | 91 | 1.11e-21 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057527.t1 | AT5G15460 | 63.636 | 99 | 34 | 1 | 1 | 99 | 1 | 97 | 2.15e-41 | 134 |
| MS.gene057527.t1 | AT5G15460 | 63.636 | 99 | 34 | 1 | 1 | 99 | 1 | 97 | 2.15e-41 | 134 |
| MS.gene057527.t1 | AT5G15460 | 63.636 | 99 | 34 | 1 | 1 | 99 | 1 | 97 | 2.15e-41 | 134 |
| MS.gene057527.t1 | AT3G01050 | 46.715 | 137 | 53 | 2 | 1 | 137 | 1 | 117 | 5.69e-40 | 130 |
| MS.gene057527.t1 | AT3G01050 | 46.715 | 137 | 53 | 2 | 1 | 137 | 1 | 117 | 5.69e-40 | 130 |
| MS.gene057527.t1 | AT3G01050 | 46.715 | 137 | 53 | 2 | 1 | 137 | 1 | 117 | 5.69e-40 | 130 |
| MS.gene057527.t1 | AT3G01050 | 46.715 | 137 | 53 | 2 | 1 | 137 | 1 | 117 | 5.69e-40 | 130 |
| MS.gene057527.t1 | AT3G01050 | 46.715 | 137 | 53 | 2 | 1 | 137 | 1 | 117 | 5.69e-40 | 130 |
| MS.gene057527.t1 | AT1G22050 | 43.478 | 138 | 58 | 3 | 1 | 137 | 1 | 119 | 4.63e-38 | 125 |
| MS.gene057527.t1 | AT1G77870 | 53.535 | 99 | 46 | 0 | 3 | 101 | 2 | 100 | 1.01e-35 | 119 |
| MS.gene057527.t1 | AT4G24990 | 55.435 | 92 | 39 | 1 | 5 | 96 | 4 | 93 | 5.72e-31 | 107 |
| MS.gene057527.t1 | AT4G24990 | 55.435 | 92 | 39 | 1 | 5 | 96 | 4 | 93 | 5.72e-31 | 107 |
| MS.gene057527.t1 | AT3G26980 | 52.174 | 92 | 42 | 1 | 4 | 95 | 3 | 92 | 1.64e-29 | 103 |
| MS.gene057527.t1 | AT5G15460 | 57.143 | 63 | 25 | 1 | 37 | 99 | 11 | 71 | 3.68e-17 | 72.0 |
Find 35 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCTTTCTTATCTGTATA+AGG | 0.267495 | 7.2:-85048636 | None:intergenic |
| CTCAAACTGCTCTTGGTTCC+CGG | 0.352665 | 7.2:-85046489 | None:intergenic |
| ACATTGAAAGAAAGTATTCT+TGG | 0.356253 | 7.2:+85046581 | MS.gene057527:CDS |
| AGTGGCGGCAGGAAAACTTT+TGG | 0.362153 | 7.2:-85046549 | None:intergenic |
| CACATAAAGGGCTTTGGCTC+TGG | 0.376161 | 7.2:-85047691 | None:intergenic |
| TTGACGGATGGTTCTGATAT+CGG | 0.410506 | 7.2:+85046524 | MS.gene057527:CDS |
| ACTTGATCTCAAACTGCTCT+TGG | 0.425909 | 7.2:-85046496 | None:intergenic |
| GTACCAGGGGTATCACATAA+AGG | 0.432829 | 7.2:-85047704 | None:intergenic |
| CTTGGATCTCCGAGCATGAC+CGG | 0.442129 | 7.2:+85046470 | None:intergenic |
| TGAGATCAAGTTTAGGTTGA+CGG | 0.445292 | 7.2:+85046508 | MS.gene057527:CDS |
| AGCAGTTTGAGATCAAGTTT+AGG | 0.445361 | 7.2:+85046501 | MS.gene057527:CDS |
| AAGAAAGTATTCTTGGTCAA+TGG | 0.452470 | 7.2:+85046588 | MS.gene057527:CDS |
| TACCAGGGGTATCACATAAA+GGG | 0.490754 | 7.2:-85047703 | None:intergenic |
| GGGTATCACATAAAGGGCTT+TGG | 0.495798 | 7.2:-85047697 | None:intergenic |
| ATTCTTGGTCAATGGCCAAA+AGG | 0.498039 | 7.2:+85046596 | MS.gene057527:CDS |
| TGCATTGTTGTAACAGTACC+AGG | 0.498824 | 7.2:-85047719 | None:intergenic |
| ATGAGACCTTTGTCTGTAGT+AGG | 0.520288 | 7.2:-85047758 | None:intergenic |
| GATTTGAAGTTAATCAGTGC+AGG | 0.542038 | 7.2:+85047632 | MS.gene057527:CDS |
| TTTCAATGTTGCAATACTAG+TGG | 0.550833 | 7.2:-85046567 | None:intergenic |
| TTGGATCTCCGAGCATGACC+GGG | 0.551174 | 7.2:+85046471 | None:intergenic |
| ATCAAGTTTAGGTTGACGGA+TGG | 0.578278 | 7.2:+85046512 | MS.gene057527:CDS |
| CAATGTTGCAATACTAGTGG+CGG | 0.583009 | 7.2:-85046564 | None:intergenic |
| GTTGCAATACTAGTGGCGGC+AGG | 0.593429 | 7.2:-85046560 | None:intergenic |
| TCCACCATGTCAATATGTGT+CGG | 0.617269 | 7.2:-85048606 | None:intergenic |
| TTGGAGAACAACAAAACAGT+CGG | 0.627089 | 7.2:+85047662 | MS.gene057527:CDS |
| AGCCCTTTATGTGATACCCC+TGG | 0.627346 | 7.2:+85047701 | MS.gene057527:CDS |
| AGACCTTTGTCTGTAGTAGG+TGG | 0.637038 | 7.2:-85047755 | None:intergenic |
| CATTGTTGTAACAGTACCAG+GGG | 0.659317 | 7.2:-85047717 | None:intergenic |
| GATGCAGCACAGCACAAATG+TGG | 0.659452 | 7.2:+85048663 | MS.gene057527:CDS |
| CAACCACCTACTACAGACAA+AGG | 0.663273 | 7.2:+85047752 | MS.gene057527:CDS |
| GCATTGTTGTAACAGTACCA+GGG | 0.672978 | 7.2:-85047718 | None:intergenic |
| AAGATAAGGAGAATGTGCCA+AGG | 0.679109 | 7.2:+85047600 | MS.gene057527:intron |
| TCATCCGACACATATTGACA+TGG | 0.682277 | 7.2:+85048602 | MS.gene057527:CDS |
| TCCGACACATATTGACATGG+TGG | 0.696078 | 7.2:+85048605 | MS.gene057527:CDS |
| TACTGTTACAACAATGCATG+TGG | 0.701570 | 7.2:+85047724 | MS.gene057527:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATTAGAACT+AGG | - | chr7.2:85047807-85047826 | None:intergenic | 10.0% |
| !! | AATAATGAATAAAAAAAACA+AGG | - | chr7.2:85048008-85048027 | None:intergenic | 10.0% |
| !! | ATAATGAATAAAAAAAACAA+GGG | - | chr7.2:85048007-85048026 | None:intergenic | 10.0% |
| !! | TCATATATCAATAAAATAAA+AGG | - | chr7.2:85047543-85047562 | None:intergenic | 10.0% |
| !! | ATTCAAAATATCACATTAAA+TGG | - | chr7.2:85047148-85047167 | None:intergenic | 15.0% |
| !!! | GATAAATTATTCTTTTTCAA+AGG | + | chr7.2:85047852-85047871 | MS.gene057527:intron | 15.0% |
| !! | ACTGATAACAAAATTTAAGA+GGG | + | chr7.2:85046855-85046874 | MS.gene057527:intron | 20.0% |
| !! | TAATAATTAGAACTAGGATT+TGG | - | chr7.2:85047801-85047820 | None:intergenic | 20.0% |
| !! | TACAAGATAGTTAATGAAAA+TGG | + | chr7.2:85048243-85048262 | MS.gene057527:intron | 20.0% |
| !! | TACTGATAACAAAATTTAAG+AGG | + | chr7.2:85046854-85046873 | MS.gene057527:intron | 20.0% |
| !! | TGATTGACATATTAATTATG+AGG | + | chr7.2:85047942-85047961 | MS.gene057527:intron | 20.0% |
| !! | TGTTTAAAGAAGTAATATAC+TGG | - | chr7.2:85048420-85048439 | None:intergenic | 20.0% |
| !! | TTATAGAAATAAGCTGAAAA+AGG | - | chr7.2:85048219-85048238 | None:intergenic | 20.0% |
| !!! | TCTTAAATTTTGTTATCAGT+AGG | - | chr7.2:85046855-85046874 | None:intergenic | 20.0% |
| !!! | TTTTCCACATTTTTAGTTTA+AGG | - | chr7.2:85047277-85047296 | None:intergenic | 20.0% |
| ! | AAATTTAATGCTGTTCTGTT+TGG | + | chr7.2:85048549-85048568 | MS.gene057527:intron | 25.0% |
| ! | AAGGTAATGAACATATCATA+AGG | - | chr7.2:85048200-85048219 | None:intergenic | 25.0% |
| ! | AATAGATATAAGTACCATCA+GGG | + | chr7.2:85046756-85046775 | MS.gene057527:intron | 25.0% |
| ! | AATTACAAGACACTAAATGA+CGG | - | chr7.2:85047314-85047333 | None:intergenic | 25.0% |
| ! | ATTAAGCTAAAAAACCGAAA+AGG | - | chr7.2:85046656-85046675 | None:intergenic | 25.0% |
| ! | CAAATCTGACATAGATAATT+TGG | - | chr7.2:85046681-85046700 | None:intergenic | 25.0% |
| ! | CTGATAACAAAATTTAAGAG+GGG | + | chr7.2:85046856-85046875 | MS.gene057527:intron | 25.0% |
| ! | CTTTAAACATGTTTATACTC+TGG | + | chr7.2:85048431-85048450 | MS.gene057527:intron | 25.0% |
| ! | TAATAGATATAAGTACCATC+AGG | + | chr7.2:85046755-85046774 | MS.gene057527:intron | 25.0% |
| ! | TTAAATTTAAGAAGCAAGCA+TGG | - | chr7.2:85048537-85048556 | None:intergenic | 25.0% |
| ! | TTAAGCTAAAAAACCGAAAA+GGG | - | chr7.2:85046655-85046674 | None:intergenic | 25.0% |
| ! | TTAATATGTCAATCAAGAAC+AGG | - | chr7.2:85047937-85047956 | None:intergenic | 25.0% |
| !! | ATCAGTTAAGAAAGTATGTA+AGG | + | chr7.2:85047231-85047250 | MS.gene057527:intron | 25.0% |
| !! | TTCAAATCTTTTATAGTCCT+TGG | - | chr7.2:85047620-85047639 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTATTGCA+GGG | - | chr7.2:85046832-85046851 | None:intergenic | 25.0% |
| !!! | ACATTGAAAGAAAGTATTCT+TGG | + | chr7.2:85046581-85046600 | MS.gene057527:CDS | 25.0% |
| !!! | GTTCGGTTTTTAAAACATTA+TGG | + | chr7.2:85047487-85047506 | MS.gene057527:intron | 25.0% |
| AATCAGTGCAGGAAAAATAT+TGG | + | chr7.2:85047643-85047662 | MS.gene057527:CDS | 30.0% | |
| ACAATGTTTCTTACAACAAC+GGG | - | chr7.2:85046725-85046744 | None:intergenic | 30.0% | |
| AGAGCCTTAAACTAAAAATG+TGG | + | chr7.2:85047270-85047289 | MS.gene057527:intron | 30.0% | |
| CACAATGTTTCTTACAACAA+CGG | - | chr7.2:85046726-85046745 | None:intergenic | 30.0% | |
| CATAGAAAGAAAAGCTGTTT+AGG | + | chr7.2:85047203-85047222 | MS.gene057527:intron | 30.0% | |
| CTAAAAATGTGGAAAACACT+AGG | + | chr7.2:85047281-85047300 | MS.gene057527:intron | 30.0% | |
| CTAAAATAACTGAACAGTGA+AGG | - | chr7.2:85047388-85047407 | None:intergenic | 30.0% | |
| TAACAAAATTTAAGAGGGGT+AGG | + | chr7.2:85046860-85046879 | MS.gene057527:intron | 30.0% | |
| TTTCAATGTTGCAATACTAG+TGG | - | chr7.2:85046570-85046589 | None:intergenic | 30.0% | |
| ! | ACACAAAACAACTAACCTTT+TGG | - | chr7.2:85046614-85046633 | None:intergenic | 30.0% |
| ! | ATTCTCTGTCATTTAAGCAA+TGG | - | chr7.2:85047063-85047082 | None:intergenic | 30.0% |
| ! | ATTTTACTACAAGTCCTGTT+TGG | - | chr7.2:85048355-85048374 | None:intergenic | 30.0% |
| ! | TTCTTTGTTCTTTCCCTTTT+CGG | + | chr7.2:85046639-85046658 | MS.gene057527:intron | 30.0% |
| !! | AAGAAAGTATTCTTGGTCAA+TGG | + | chr7.2:85046588-85046607 | MS.gene057527:CDS | 30.0% |
| !! | ATCAAACTTTGTTATTGCAG+GGG | - | chr7.2:85046831-85046850 | None:intergenic | 30.0% |
| !! | GAATCAAACTTTGTTATTGC+AGG | - | chr7.2:85046833-85046852 | None:intergenic | 30.0% |
| !!! | TGTGTTGTGTTTTGAAGATA+AGG | + | chr7.2:85047586-85047605 | MS.gene057527:intron | 30.0% |
| !!! | TTATTTTAGCAATTCGACCA+CGG | + | chr7.2:85047399-85047418 | MS.gene057527:intron | 30.0% |
| ATATACTGGATATGTCAAGC+TGG | - | chr7.2:85048406-85048425 | None:intergenic | 35.0% | |
| TACTGTTACAACAATGCATG+TGG | + | chr7.2:85047724-85047743 | MS.gene057527:CDS | 35.0% | |
| TCAAACGTGTCAATCAAGAA+AGG | - | chr7.2:85048122-85048141 | None:intergenic | 35.0% | |
| TCTTTCTATGAAGCATATGC+AGG | - | chr7.2:85047193-85047212 | None:intergenic | 35.0% | |
| TTCCTTGACAGCTAAGTTAA+AGG | - | chr7.2:85047977-85047996 | None:intergenic | 35.0% | |
| TTGGAGAACAACAAAACAGT+CGG | + | chr7.2:85047662-85047681 | MS.gene057527:CDS | 35.0% | |
| TTTAAGCAATGGCTACATCT+AGG | - | chr7.2:85047052-85047071 | None:intergenic | 35.0% | |
| ! | AGCAGTTTGAGATCAAGTTT+AGG | + | chr7.2:85046501-85046520 | MS.gene057527:CDS | 35.0% |
| ! | ATCCTTTAACTTAGCTGTCA+AGG | + | chr7.2:85047972-85047991 | MS.gene057527:intron | 35.0% |
| ! | CTACTGACATAAGCTTTTGA+GGG | + | chr7.2:85048148-85048167 | MS.gene057527:intron | 35.0% |
| ! | CTTAAGTTGCTTATCCAAAC+AGG | + | chr7.2:85048338-85048357 | MS.gene057527:intron | 35.0% |
| ! | GATTTGAAGTTAATCAGTGC+AGG | + | chr7.2:85047632-85047651 | MS.gene057527:CDS | 35.0% |
| ! | GCTGCTTTCTTATCTGTATA+AGG | - | chr7.2:85048639-85048658 | None:intergenic | 35.0% |
| ! | TCTACTGACATAAGCTTTTG+AGG | + | chr7.2:85048147-85048166 | MS.gene057527:intron | 35.0% |
| !! | ATTGGATCGATTCGAAAACT+GGG | + | chr7.2:85046890-85046909 | MS.gene057527:intron | 35.0% |
| !! | TGAGATCAAGTTTAGGTTGA+CGG | + | chr7.2:85046508-85046527 | MS.gene057527:CDS | 35.0% |
| AAGATAAGGAGAATGTGCCA+AGG | + | chr7.2:85047600-85047619 | MS.gene057527:intron | 40.0% | |
| ACTTGATCTCAAACTGCTCT+TGG | - | chr7.2:85046499-85046518 | None:intergenic | 40.0% | |
| ATGAGACCTTTGTCTGTAGT+AGG | - | chr7.2:85047761-85047780 | None:intergenic | 40.0% | |
| ATTCTTGGTCAATGGCCAAA+AGG | + | chr7.2:85046596-85046615 | MS.gene057527:CDS | 40.0% | |
| CAAAATTTAAGAGGGGTAGG+TGG | + | chr7.2:85046863-85046882 | MS.gene057527:intron | 40.0% | |
| CAATGTTGCAATACTAGTGG+CGG | - | chr7.2:85046567-85046586 | None:intergenic | 40.0% | |
| CATTGTTGTAACAGTACCAG+GGG | - | chr7.2:85047720-85047739 | None:intergenic | 40.0% | |
| GAACTAGGATTTGGCATTGT+TGG | - | chr7.2:85047792-85047811 | None:intergenic | 40.0% | |
| GCATTGTTGTAACAGTACCA+GGG | - | chr7.2:85047721-85047740 | None:intergenic | 40.0% | |
| TCAGCAAGACTTCTGGATTA+TGG | - | chr7.2:85047461-85047480 | None:intergenic | 40.0% | |
| TCATCCGACACATATTGACA+TGG | + | chr7.2:85048602-85048621 | MS.gene057527:CDS | 40.0% | |
| TCCACCATGTCAATATGTGT+CGG | - | chr7.2:85048609-85048628 | None:intergenic | 40.0% | |
| TGCATTGTTGTAACAGTACC+AGG | - | chr7.2:85047722-85047741 | None:intergenic | 40.0% | |
| TTCGAAAACTGGGTGATATC+AGG | + | chr7.2:85046900-85046919 | MS.gene057527:intron | 40.0% | |
| !! | ACGGTTTTGTCCCGATATAA+GGG | + | chr7.2:85047418-85047437 | MS.gene057527:intron | 40.0% |
| !! | AGTCTTGCTGATTCGTTGTT+CGG | + | chr7.2:85047470-85047489 | MS.gene057527:intron | 40.0% |
| !! | ATCAAGTTTAGGTTGACGGA+TGG | + | chr7.2:85046512-85046531 | MS.gene057527:CDS | 40.0% |
| !! | CATGATCATCTGAGGCTTTT+GGG | + | chr7.2:85046925-85046944 | MS.gene057527:intron | 40.0% |
| !! | GATTGGATCGATTCGAAAAC+TGG | + | chr7.2:85046889-85046908 | MS.gene057527:intron | 40.0% |
| !! | TACCAGGGGTATCACATAAA+GGG | - | chr7.2:85047706-85047725 | None:intergenic | 40.0% |
| !! | TTGACGGATGGTTCTGATAT+CGG | + | chr7.2:85046524-85046543 | MS.gene057527:CDS | 40.0% |
| AGACCTTTGTCTGTAGTAGG+TGG | - | chr7.2:85047758-85047777 | None:intergenic | 45.0% | |
| ATCAGGTGCATGATCATCTG+AGG | + | chr7.2:85046917-85046936 | MS.gene057527:intron | 45.0% | |
| CAACCACCTACTACAGACAA+AGG | + | chr7.2:85047752-85047771 | MS.gene057527:CDS | 45.0% | |
| CAACGAATCAGCAAGACTTC+TGG | - | chr7.2:85047468-85047487 | None:intergenic | 45.0% | |
| CTTATATCGGGACAAAACCG+TGG | - | chr7.2:85047419-85047438 | None:intergenic | 45.0% | |
| GGGTATCACATAAAGGGCTT+TGG | - | chr7.2:85047700-85047719 | None:intergenic | 45.0% | |
| TCCGACACATATTGACATGG+TGG | + | chr7.2:85048605-85048624 | MS.gene057527:CDS | 45.0% | |
| TGCCTTAAGCCCCCTTATAT+CGG | - | chr7.2:85047432-85047451 | None:intergenic | 45.0% | |
| TTACAGTCCTAGCTTCACAG+AGG | - | chr7.2:85048067-85048086 | None:intergenic | 45.0% | |
| ! | AGGCTGATTCAAGGCTCAAT+CGG | - | chr7.2:85047368-85047387 | None:intergenic | 45.0% |
| ! | GAACAGTGAAGGCTGATTCA+AGG | - | chr7.2:85047377-85047396 | None:intergenic | 45.0% |
| !! | CACGGTTTTGTCCCGATATA+AGG | + | chr7.2:85047417-85047436 | MS.gene057527:intron | 45.0% |
| !! | CGGTTTTGTCCCGATATAAG+GGG | + | chr7.2:85047419-85047438 | MS.gene057527:intron | 45.0% |
| !! | GCATGATCATCTGAGGCTTT+TGG | + | chr7.2:85046924-85046943 | MS.gene057527:intron | 45.0% |
| !! | GGTTTTGTCCCGATATAAGG+GGG | + | chr7.2:85047420-85047439 | MS.gene057527:intron | 45.0% |
| !! | GTACCAGGGGTATCACATAA+AGG | - | chr7.2:85047707-85047726 | None:intergenic | 45.0% |
| !!! | GGCTTTTGGGTTTGATGTAC+TGG | + | chr7.2:85046938-85046957 | MS.gene057527:intron | 45.0% |
| AGAGGGGTAGGTGGTTTGAT+TGG | + | chr7.2:85046872-85046891 | MS.gene057527:intron | 50.0% | |
| AGCCCTTTATGTGATACCCC+TGG | + | chr7.2:85047701-85047720 | MS.gene057527:CDS | 50.0% | |
| CTCAAACTGCTCTTGGTTCC+CGG | - | chr7.2:85046492-85046511 | None:intergenic | 50.0% | |
| GATGCAGCACAGCACAAATG+TGG | + | chr7.2:85048663-85048682 | MS.gene057527:CDS | 50.0% | |
| GCCTTAAGCCCCCTTATATC+GGG | - | chr7.2:85047431-85047450 | None:intergenic | 50.0% | |
| GTAGTCTCCTCTGTGAAGCT+AGG | + | chr7.2:85048057-85048076 | MS.gene057527:intron | 50.0% | |
| TCCCGATATAAGGGGGCTTA+AGG | + | chr7.2:85047427-85047446 | MS.gene057527:intron | 50.0% | |
| ! | AGTGGCGGCAGGAAAACTTT+TGG | - | chr7.2:85046552-85046571 | None:intergenic | 50.0% |
| ! | CACATAAAGGGCTTTGGCTC+TGG | - | chr7.2:85047694-85047713 | None:intergenic | 50.0% |
| ! | GTGGCGGCAGGAAAACTTTT+GGG | - | chr7.2:85046551-85046570 | None:intergenic | 50.0% |
| ! | TGGCGGCAGGAAAACTTTTG+GGG | - | chr7.2:85046550-85046569 | None:intergenic | 50.0% |
| AATCGGTTGAACCGTCGAGC+AGG | - | chr7.2:85047351-85047370 | None:intergenic | 55.0% | |
| GTTGCAATACTAGTGGCGGC+AGG | - | chr7.2:85046563-85046582 | None:intergenic | 55.0% | |
| TTGCGCTAGACAGACCCTGA+TGG | - | chr7.2:85046773-85046792 | None:intergenic | 55.0% | |
| ! | TTCCTTGCTGTCCTGCTCGA+CGG | + | chr7.2:85047337-85047356 | MS.gene057527:intron | 55.0% |
| AACCGTCGAGCAGGACAGCA+AGG | - | chr7.2:85047342-85047361 | None:intergenic | 60.0% | |
| CAGGGTCTGTCTAGCGCAAG+TGG | + | chr7.2:85046774-85046793 | MS.gene057527:intron | 60.0% | |
| GTCTGTCTAGCGCAAGTGGC+TGG | + | chr7.2:85046778-85046797 | MS.gene057527:intron | 60.0% | |
| AGCGCAAGTGGCTGGTGTGC+AGG | + | chr7.2:85046786-85046805 | MS.gene057527:intron | 65.0% | |
| CGCAAGTGGCTGGTGTGCAG+GGG | + | chr7.2:85046788-85046807 | MS.gene057527:intron | 65.0% | |
| GCGCAAGTGGCTGGTGTGCA+GGG | + | chr7.2:85046787-85046806 | MS.gene057527:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 85046485 | 85048701 | 85046485 | ID=MS.gene057527 |
| chr7.2 | mRNA | 85046485 | 85048701 | 85046485 | ID=MS.gene057527.t1;Parent=MS.gene057527 |
| chr7.2 | exon | 85046485 | 85046617 | 85046485 | ID=MS.gene057527.t1.exon1;Parent=MS.gene057527.t1 |
| chr7.2 | CDS | 85046485 | 85046617 | 85046485 | ID=cds.MS.gene057527.t1;Parent=MS.gene057527.t1 |
| chr7.2 | exon | 85047603 | 85047773 | 85047603 | ID=MS.gene057527.t1.exon2;Parent=MS.gene057527.t1 |
| chr7.2 | CDS | 85047603 | 85047773 | 85047603 | ID=cds.MS.gene057527.t1;Parent=MS.gene057527.t1 |
| chr7.2 | exon | 85048592 | 85048701 | 85048592 | ID=MS.gene057527.t1.exon3;Parent=MS.gene057527.t1 |
| chr7.2 | CDS | 85048592 | 85048701 | 85048592 | ID=cds.MS.gene057527.t1;Parent=MS.gene057527.t1 |
| Gene Sequence |
| Protein sequence |
