AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022543

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022543.t1 MTR_8g006090 90.110 364 29 3 1 363 1 358 0.0 607
MS.gene022543.t1 MTR_8g006010 77.031 357 79 3 4 359 3 357 0.0 545
MS.gene022543.t1 MTR_2g065550 74.324 370 82 3 3 360 2 370 0.0 530
MS.gene022543.t1 MTR_8g006090 91.586 309 24 2 1 308 1 308 0.0 521
MS.gene022543.t1 MTR_8g006120 72.386 373 87 4 3 360 2 373 5.79e-178 499
MS.gene022543.t1 MTR_8g006050 65.252 377 83 5 1 362 1 344 4.72e-165 465
MS.gene022543.t1 MTR_8g006090 90.106 283 21 3 81 362 1 277 1.66e-164 461
MS.gene022543.t1 MTR_8g006090 90.588 255 22 2 1 254 1 254 1.40e-144 411
MS.gene022543.t1 MTR_4g129650 48.626 364 179 4 1 362 1 358 2.11e-121 355
MS.gene022543.t1 MTR_8g006090 90.286 175 15 2 81 254 1 174 8.61e-89 266
MS.gene022543.t1 MTR_4g129650 48.425 254 128 2 109 362 1 251 2.60e-83 254
MS.gene022543.t1 MTR_8g041390 36.639 363 209 6 6 351 11 369 1.12e-75 239
MS.gene022543.t1 MTR_6g081840 38.348 339 199 4 20 352 19 353 5.18e-71 226
MS.gene022543.t1 MTR_1g023180 35.501 369 214 3 14 359 24 391 5.38e-71 227
MS.gene022543.t1 MTR_3g112480 36.216 370 209 5 16 362 25 390 1.80e-70 226
MS.gene022543.t1 MTR_6g036450 36.527 334 207 2 7 337 12 343 7.11e-69 220
MS.gene022543.t1 MTR_3g012420 37.309 327 200 4 12 335 18 342 1.23e-68 221
MS.gene022543.t1 MTR_2g007960 32.597 362 231 5 12 363 13 371 1.22e-65 213
MS.gene022543.t1 MTR_2g016710 32.948 346 229 2 8 353 5 347 1.83e-64 209
MS.gene022543.t1 MTR_1g038560 34.393 346 213 6 12 355 4 337 1.14e-62 204
MS.gene022543.t1 MTR_7g111830 33.133 332 214 3 11 335 7 337 1.75e-62 204
MS.gene022543.t1 MTR_2g007990 33.141 347 221 4 12 352 16 357 1.89e-62 205
MS.gene022543.t1 MTR_1g030580 35.088 342 216 3 12 353 17 352 2.01e-62 204
MS.gene022543.t1 MTR_1g074120 35.143 350 211 7 10 354 15 353 2.13e-61 201
MS.gene022543.t1 MTR_1g068630 34.706 340 218 4 12 350 16 352 2.43e-61 201
MS.gene022543.t1 MTR_3g112480 36.184 304 174 3 79 362 32 335 3.03e-61 200
MS.gene022543.t1 MTR_3g072500 33.434 332 212 3 12 338 21 348 6.80e-61 201
MS.gene022543.t1 MTR_0096s0100 37.538 333 187 6 8 330 15 336 1.86e-60 199
MS.gene022543.t1 MTR_1g074070 34.627 335 214 4 5 337 10 341 3.09e-60 198
MS.gene022543.t1 MTR_2g007970 32.861 353 230 3 12 362 13 360 8.71e-60 198
MS.gene022543.t1 MTR_1g030600 38.806 335 184 7 6 330 16 339 3.66e-59 196
MS.gene022543.t1 MTR_7g100050 33.516 364 233 6 6 362 8 369 8.40e-59 195
MS.gene022543.t1 MTR_1g073990 36.556 331 206 4 10 338 15 343 1.76e-58 193
MS.gene022543.t1 MTR_4g106720 34.568 324 204 3 11 330 11 330 1.86e-58 193
MS.gene022543.t1 MTR_3g095420 32.857 350 229 3 12 356 8 356 2.22e-58 193
MS.gene022543.t1 MTR_5g021160 31.742 356 234 4 14 363 10 362 2.37e-58 193
MS.gene022543.t1 MTR_1g114210 31.965 341 225 3 12 351 12 346 5.10e-58 192
MS.gene022543.t1 MTR_1g074160 35.015 337 208 6 10 341 12 342 8.88e-58 191
MS.gene022543.t1 MTR_2g027030 32.507 363 226 6 7 363 8 357 1.14e-57 191
MS.gene022543.t1 MTR_1g074020 36.103 349 208 9 12 352 14 355 7.43e-57 189
MS.gene022543.t1 MTR_1g051120 32.853 347 225 6 10 352 15 357 1.61e-56 188
MS.gene022543.t1 MTR_2g102340 33.140 344 225 4 15 356 16 356 6.05e-56 187
MS.gene022543.t1 MTR_8g092650 34.493 345 218 4 12 349 6 349 7.36e-56 186
MS.gene022543.t1 MTR_2g007260 33.711 353 215 6 12 352 15 360 3.67e-55 186
MS.gene022543.t1 MTR_1g070175 31.285 358 231 6 8 361 13 359 5.66e-55 184
MS.gene022543.t1 MTR_3g095460 32.951 349 213 5 12 356 6 337 1.53e-54 182
MS.gene022543.t1 MTR_2g016710 32.558 301 200 2 8 308 5 302 3.85e-53 178
MS.gene022543.t1 MTR_3g072560 31.124 347 235 3 12 357 19 362 4.32e-53 181
MS.gene022543.t1 MTR_3g072520 35.398 339 213 5 12 346 10 346 8.09e-53 179
MS.gene022543.t1 MTR_3g090550 31.686 344 227 4 11 350 6 345 9.50e-53 178
MS.gene022543.t1 MTR_3g072530 30.704 355 235 5 6 354 9 358 1.49e-52 178
MS.gene022543.t1 MTR_3g095450 33.333 324 211 2 12 330 6 329 1.02e-51 176
MS.gene022543.t1 MTR_4g094340 31.214 346 226 4 12 351 10 349 6.43e-51 174
MS.gene022543.t1 MTR_4g094340 31.214 346 226 4 12 351 28 367 1.18e-50 173
MS.gene022543.t1 MTR_3g072500 34.836 244 157 1 97 338 2 245 1.30e-50 171
MS.gene022543.t1 MTR_1g030400 28.775 351 235 4 20 356 16 365 1.55e-48 168
MS.gene022543.t1 MTR_4g094352 30.595 353 237 3 12 357 13 364 3.21e-48 167
MS.gene022543.t1 MTR_4g094362 30.114 352 243 2 7 356 10 360 5.51e-48 167
MS.gene022543.t1 MTR_3g112480 33.840 263 154 3 120 362 1 263 9.55e-48 163
MS.gene022543.t1 MTR_4g094342 30.938 320 213 3 12 325 14 331 2.25e-47 164
MS.gene022543.t1 MTR_5g034990 32.733 333 216 4 1 330 1 328 1.14e-46 162
MS.gene022543.t1 MTR_4g094360 31.250 352 231 5 7 353 10 355 1.21e-46 164
MS.gene022543.t1 MTR_3g095440 33.538 325 209 3 12 330 6 329 6.92e-46 160
MS.gene022543.t1 MTR_0103s0090 33.134 335 210 5 31 355 31 361 2.36e-45 159
MS.gene022543.t1 MTR_3g019050 29.799 349 238 3 16 363 23 365 1.01e-44 158
MS.gene022543.t1 MTR_5g021160 30.108 279 191 2 89 363 1 279 1.50e-44 155
MS.gene022543.t1 MTR_5g025370 31.832 333 206 5 16 330 15 344 5.82e-44 156
MS.gene022543.t1 MTR_8g092650 34.146 246 155 3 111 349 26 271 5.68e-43 150
MS.gene022543.t1 MTR_5g089390 29.167 336 226 5 16 346 19 347 1.00e-41 149
MS.gene022543.t1 MTR_4g094340 32.714 269 171 3 89 351 19 283 2.41e-41 147
MS.gene022543.t1 MTR_5g025400 29.067 375 239 6 1 353 4 373 3.84e-41 149
MS.gene022543.t1 MTR_5g069040 27.528 356 247 3 13 363 20 369 5.24e-41 148
MS.gene022543.t1 MTR_5g068790 27.596 366 244 3 13 358 20 384 7.28e-41 148
MS.gene022543.t1 MTR_5g025330 30.084 359 227 7 16 353 14 369 2.47e-40 150
MS.gene022543.t1 MTR_5g034910 28.615 325 231 1 16 340 12 335 4.11e-40 145
MS.gene022543.t1 MTR_5g034980 29.022 317 205 4 23 330 20 325 1.60e-39 143
MS.gene022543.t1 MTR_0103s0090 33.210 271 168 4 95 355 3 270 2.82e-39 140
MS.gene022543.t1 MTR_5g025340 29.477 363 229 7 16 363 15 365 8.91e-39 142
MS.gene022543.t1 MTR_5g025290 30.030 333 214 5 14 330 14 343 1.25e-38 142
MS.gene022543.t1 MTR_5g025290 30.030 333 214 5 14 330 42 371 1.81e-38 142
MS.gene022543.t1 MTR_3g072500 31.727 249 167 2 12 258 21 268 2.13e-38 139
MS.gene022543.t1 MTR_6g007747 33.660 306 191 4 31 333 32 328 1.17e-37 139
MS.gene022543.t1 MTR_6g007743 30.820 305 203 3 31 333 32 330 1.33e-37 139
MS.gene022543.t1 MTR_4g094360 31.599 269 178 3 88 353 43 308 2.61e-37 137
MS.gene022543.t1 MTR_6g007760 32.281 285 182 4 31 310 31 309 7.75e-37 135
MS.gene022543.t1 MTR_5g034930 26.006 323 238 1 15 337 10 331 1.40e-36 135
MS.gene022543.t1 MTR_4g094360 31.126 302 200 4 12 308 15 313 1.86e-36 134
MS.gene022543.t1 MTR_1g014510 28.529 333 234 3 1 330 1 332 8.83e-35 133
MS.gene022543.t1 MTR_6g007750 31.325 332 217 6 11 338 12 336 2.05e-33 127
MS.gene022543.t1 MTR_6g007740 30.061 326 220 3 10 333 11 330 2.47e-33 129
MS.gene022543.t1 MTR_8g072350 27.078 373 251 7 4 361 2 368 3.31e-33 127
MS.gene022543.t1 MTR_5g012650 27.714 350 227 7 19 359 16 348 6.77e-33 125
MS.gene022543.t1 MTR_1g074160 33.730 252 157 5 10 257 12 257 8.16e-33 124
MS.gene022543.t1 MTR_5g021160 30.924 249 165 3 14 258 10 255 2.99e-32 122
MS.gene022543.t1 MTR_1g052205 34.413 247 122 8 126 349 14 243 2.52e-31 119
MS.gene022543.t1 MTR_6g007753 31.579 285 189 3 51 333 334 614 1.32e-30 123
MS.gene022543.t1 MTR_6g007753 29.954 217 149 1 117 333 77 290 3.83e-23 101
MS.gene022543.t1 MTR_6g007757 31.361 338 211 6 31 363 32 353 4.77e-30 118
MS.gene022543.t1 MTR_4g100840 26.420 352 226 11 19 359 22 351 1.59e-29 117
MS.gene022543.t1 MTR_3g095440 30.952 252 167 3 12 257 6 256 3.41e-29 114
MS.gene022543.t1 MTR_3g072500 33.500 200 124 3 12 206 21 216 4.51e-29 112
MS.gene022543.t1 MTR_2g102340 32.114 246 162 4 15 258 42 284 1.43e-27 110
MS.gene022543.t1 MTR_4g094340 30.418 263 172 3 12 268 10 267 2.16e-27 109
MS.gene022543.t1 MTR_4g094340 30.418 263 172 3 12 268 28 285 3.52e-27 108
MS.gene022543.t1 MTR_5g034970 25.466 322 226 2 16 337 12 319 2.37e-26 107
MS.gene022543.t1 MTR_3g072530 33.333 198 123 4 12 205 15 207 7.23e-25 103
MS.gene022543.t1 MTR_1g051120 29.609 179 121 3 30 206 35 210 5.76e-21 90.5
MS.gene022543.t1 MTR_4g094340 32.338 201 125 3 12 206 28 223 1.05e-20 89.7
MS.gene022543.t1 MTR_1g051120 28.283 198 137 3 10 205 15 209 3.92e-20 89.4
MS.gene022543.t1 MTR_4g094342 29.952 207 137 3 12 212 14 218 7.72e-20 88.2
MS.gene022543.t1 MTR_5g034980 27.347 245 158 4 23 258 20 253 1.48e-19 88.2
MS.gene022543.t1 MTR_6g007757 29.870 231 149 4 31 256 32 254 1.59e-16 79.3
MS.gene022543.t1 MTR_1g014790 32.331 133 75 3 95 219 46 171 6.64e-12 64.3
MS.gene022543.t1 MTR_1g068720 32.800 125 77 3 211 330 101 223 7.42e-12 65.1
MS.gene022543.t1 MTR_4g094348 30.081 123 77 1 92 205 2 124 1.90e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022543.t1 AT4G30420 50.541 370 170 5 6 363 3 371 8.53e-128 372
MS.gene022543.t1 AT4G30420 50.829 362 165 5 14 363 1 361 2.70e-125 365
MS.gene022543.t1 AT4G28040 42.899 345 178 6 5 346 1 329 2.53e-91 278
MS.gene022543.t1 AT4G28040 42.899 345 178 6 5 346 1 329 2.53e-91 278
MS.gene022543.t1 AT4G28040 42.899 345 178 6 5 346 1 329 2.53e-91 278
MS.gene022543.t1 AT4G28040 42.899 345 178 6 5 346 1 329 2.53e-91 278
MS.gene022543.t1 AT4G28040 42.899 345 178 6 5 346 1 329 2.53e-91 278
MS.gene022543.t1 AT1G75500 37.931 348 203 5 14 353 22 364 7.37e-71 226
MS.gene022543.t1 AT1G75500 37.931 348 203 5 14 353 22 364 7.37e-71 226
MS.gene022543.t1 AT4G08300 37.391 345 204 5 1 338 1 340 2.18e-69 222
MS.gene022543.t1 AT1G21890 36.022 372 216 5 1 362 1 360 1.27e-66 216
MS.gene022543.t1 AT1G44800 36.735 343 214 3 1 342 1 341 7.20e-66 213
MS.gene022543.t1 AT3G18200 34.036 332 212 3 1 330 24 350 3.11e-65 212
MS.gene022543.t1 AT3G53210 35.393 356 215 4 14 360 12 361 5.19e-64 208
MS.gene022543.t1 AT5G07050 35.613 351 210 6 12 349 18 365 1.19e-62 206
MS.gene022543.t1 AT1G09380 35.514 321 202 3 11 327 7 326 4.93e-61 201
MS.gene022543.t1 AT2G40900 34.925 335 209 4 4 337 2 328 1.64e-60 200
MS.gene022543.t1 AT5G64700 34.454 357 224 3 5 352 1 356 3.22e-60 198
MS.gene022543.t1 AT3G56620 34.769 325 206 3 4 327 2 321 9.70e-59 195
MS.gene022543.t1 AT2G39510 34.650 329 209 6 5 330 1 326 1.51e-58 194
MS.gene022543.t1 AT2G37460 34.731 334 196 9 7 330 10 331 3.12e-57 191
MS.gene022543.t1 AT1G43650 33.433 335 217 4 14 346 9 339 4.30e-56 187
MS.gene022543.t1 AT3G53210 36.396 283 166 3 87 360 27 304 2.11e-55 184
MS.gene022543.t1 AT1G21890 36.909 317 189 3 1 308 1 315 2.08e-54 182
MS.gene022543.t1 AT5G13670 30.854 363 239 7 5 362 1 356 3.28e-54 183
MS.gene022543.t1 AT1G11450 32.945 343 220 5 12 350 16 352 7.94e-53 179
MS.gene022543.t1 AT3G30340 30.841 321 211 3 36 355 35 345 1.48e-51 176
MS.gene022543.t1 AT4G01440 31.024 332 226 3 10 340 8 337 2.20e-51 175
MS.gene022543.t1 AT4G08290 32.551 341 215 6 7 337 8 343 4.07e-51 175
MS.gene022543.t1 AT1G11450 33.981 309 194 5 46 350 6 308 1.56e-50 171
MS.gene022543.t1 AT1G11460 33.127 323 210 3 12 331 16 335 7.23e-50 170
MS.gene022543.t1 AT3G28050 33.989 356 209 10 11 357 11 349 3.09e-49 169
MS.gene022543.t1 AT1G11450 33.660 306 193 5 49 350 2 301 6.60e-49 167
MS.gene022543.t1 AT4G01430 28.809 361 246 6 8 363 5 359 6.64e-49 169
MS.gene022543.t1 AT5G40230 32.676 355 221 5 11 362 20 359 3.34e-48 167
MS.gene022543.t1 AT1G01070 31.437 334 222 4 1 330 5 335 3.67e-48 167
MS.gene022543.t1 AT3G18200 33.929 224 142 2 109 330 1 220 6.18e-46 157
MS.gene022543.t1 AT1G70260 28.532 361 242 5 11 359 11 367 1.67e-45 160
MS.gene022543.t1 AT5G47470 31.322 348 217 6 16 359 34 363 3.50e-45 159
MS.gene022543.t1 AT5G40240 31.889 323 216 3 11 330 19 340 5.30e-45 158
MS.gene022543.t1 AT5G40240 31.889 323 216 3 11 330 19 340 5.30e-45 158
MS.gene022543.t1 AT5G47470 31.322 348 217 6 16 359 62 391 5.94e-45 159
MS.gene022543.t1 AT5G40240 31.889 323 216 3 11 330 33 354 7.76e-45 158
MS.gene022543.t1 AT5G47470 32.288 319 204 5 16 330 62 372 1.49e-44 157
MS.gene022543.t1 AT1G11450 34.091 264 165 4 91 350 2 260 3.72e-44 153
MS.gene022543.t1 AT4G01440 29.373 303 211 3 10 311 8 308 7.75e-44 154
MS.gene022543.t1 AT2G37450 32.416 327 192 6 7 330 4 304 1.66e-42 151
MS.gene022543.t1 AT1G68170 30.595 353 233 5 13 360 4 349 1.73e-42 151
MS.gene022543.t1 AT1G68170 30.595 353 233 5 13 360 14 359 2.39e-42 151
MS.gene022543.t1 AT4G15540 32.754 345 212 5 11 348 16 347 4.88e-42 150
MS.gene022543.t1 AT4G15540 32.754 345 212 5 11 348 16 347 4.88e-42 150
MS.gene022543.t1 AT5G45370 30.495 364 232 8 2 363 10 354 5.31e-42 150
MS.gene022543.t1 AT3G53210 36.653 251 143 4 14 258 12 252 1.19e-41 147
MS.gene022543.t1 AT5G45370 30.000 380 237 9 2 363 10 378 4.40e-41 148
MS.gene022543.t1 AT5G45370 30.000 380 237 9 2 363 10 378 4.40e-41 148
MS.gene022543.t1 AT1G01070 32.422 256 167 3 80 331 36 289 4.39e-40 144
MS.gene022543.t1 AT4G16620 31.844 358 207 11 20 359 20 358 7.63e-40 144
MS.gene022543.t1 AT1G11450 31.208 298 202 3 12 308 16 311 8.00e-40 144
MS.gene022543.t1 AT4G01430 28.889 315 217 5 8 317 5 317 6.52e-39 141
MS.gene022543.t1 AT4G01440 32.174 230 154 2 112 340 1 229 4.28e-38 137
MS.gene022543.t1 AT4G01440 32.174 230 154 2 112 340 1 229 4.28e-38 137
MS.gene022543.t1 AT3G45870 30.650 323 211 3 14 325 14 334 4.79e-38 140
MS.gene022543.t1 AT1G60050 26.796 362 249 4 8 360 9 363 1.47e-37 139
MS.gene022543.t1 AT5G40210 30.769 325 197 8 16 334 17 319 1.62e-36 135
MS.gene022543.t1 AT1G25270 27.586 348 243 3 13 358 4 344 6.00e-36 134
MS.gene022543.t1 AT4G19185 30.303 330 213 5 16 330 25 352 6.82e-36 135
MS.gene022543.t1 AT5G64700 32.308 260 168 2 5 257 1 259 2.65e-35 130
MS.gene022543.t1 AT4G01450 30.149 335 229 2 10 344 8 337 1.01e-34 131
MS.gene022543.t1 AT3G45870 29.545 308 204 3 14 310 14 319 3.42e-32 123
MS.gene022543.t1 AT2G37450 33.476 233 148 5 101 330 4 232 2.51e-31 119
MS.gene022543.t1 AT3G28130 28.261 276 170 7 95 362 9 264 5.79e-31 119
MS.gene022543.t1 AT3G28130 28.261 276 170 7 95 362 9 264 5.79e-31 119
MS.gene022543.t1 AT1G43650 31.967 244 162 3 14 257 9 248 1.71e-30 117
MS.gene022543.t1 AT4G19185 30.385 260 165 4 86 330 16 274 1.76e-30 119
MS.gene022543.t1 AT3G28130 28.261 276 170 7 95 362 95 350 2.00e-30 119
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 9 244 2.24e-30 117
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 9 244 2.24e-30 117
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 9 244 2.24e-30 117
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 9 244 2.24e-30 117
MS.gene022543.t1 AT4G01450 28.763 299 208 2 10 308 8 301 3.27e-30 118
MS.gene022543.t1 AT3G28100 29.167 240 166 3 97 333 98 336 6.80e-30 117
MS.gene022543.t1 AT3G28070 30.864 243 158 6 97 333 9 247 7.16e-30 115
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 90 325 1.14e-29 117
MS.gene022543.t1 AT4G01430 28.634 227 153 4 141 363 1 222 1.44e-29 114
MS.gene022543.t1 AT3G28080 29.707 239 160 5 97 330 98 333 1.69e-29 117
MS.gene022543.t1 AT4G08290 31.496 254 169 4 7 257 8 259 2.47e-29 114
MS.gene022543.t1 AT4G16620 31.522 276 154 9 101 359 4 261 2.65e-29 114
MS.gene022543.t1 AT4G16620 31.522 276 154 9 101 359 4 261 2.65e-29 114
MS.gene022543.t1 AT3G28070 30.453 243 159 6 97 333 101 339 2.96e-29 116
MS.gene022543.t1 AT5G45370 29.123 285 174 8 97 363 2 276 3.12e-29 114
MS.gene022543.t1 AT5G45370 29.123 285 174 8 97 363 2 276 3.12e-29 114
MS.gene022543.t1 AT2G37450 28.746 327 165 7 7 330 4 265 4.16e-29 114
MS.gene022543.t1 AT4G01440 28.400 250 176 3 10 258 8 255 9.81e-28 110
MS.gene022543.t1 AT4G24980 28.783 337 162 10 31 361 6 270 1.57e-26 107
MS.gene022543.t1 AT3G30340 29.464 224 156 2 36 258 35 257 2.24e-24 101
MS.gene022543.t1 AT3G45870 28.800 250 166 2 8 246 8 256 6.32e-24 100
MS.gene022543.t1 AT3G28080 27.119 236 116 5 97 330 9 190 1.46e-22 94.7
MS.gene022543.t1 AT5G45370 28.235 255 155 8 127 363 74 318 1.50e-22 97.1
MS.gene022543.t1 AT3G28080 28.095 210 143 5 126 330 1 207 2.81e-22 94.4
MS.gene022543.t1 AT3G28130 26.122 245 153 7 126 362 1 225 3.10e-22 94.4
MS.gene022543.t1 AT3G45870 30.000 210 135 2 127 325 51 259 8.67e-22 94.7
MS.gene022543.t1 AT3G28080 27.119 236 116 5 97 330 98 279 1.13e-21 94.4
MS.gene022543.t1 AT4G01450 27.126 247 175 2 12 258 10 251 1.15e-21 93.6
MS.gene022543.t1 AT3G28070 28.972 214 142 6 126 333 1 210 1.38e-21 92.4
MS.gene022543.t1 AT4G16620 32.099 243 150 6 20 260 20 249 3.67e-21 92.4
MS.gene022543.t1 AT3G28070 28.444 225 137 7 97 308 101 314 3.65e-20 90.1
MS.gene022543.t1 AT4G01450 27.228 202 142 2 12 213 10 206 1.39e-18 84.3
MS.gene022543.t1 AT3G45870 28.205 195 128 2 127 310 51 244 2.75e-16 78.2
MS.gene022543.t1 AT3G45870 28.205 195 128 2 127 310 51 244 2.75e-16 78.2
MS.gene022543.t1 AT3G45870 32.394 142 95 1 184 325 43 183 2.06e-15 75.1
MS.gene022543.t1 AT3G28100 31.061 132 89 1 97 226 98 229 1.37e-11 64.7

Find 74 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTTATTCCTTAAATTTA+AGG 0.107153 8.4:-80666191 MS.gene022543:CDS
GTTCCTCTTGCTTATTTATC+AGG 0.150190 8.4:-80666302 MS.gene022543:CDS
CTTGGATGTCTGTCTCTTCT+TGG 0.151616 8.4:-80665132 MS.gene022543:CDS
GTCTCATTAACCATCGATTT+TGG 0.156620 8.4:+80662651 None:intergenic
TATAATTGTTCCCACTATTT+TGG 0.158416 8.4:+80665275 None:intergenic
TTATTCATCACCTCACTAAT+TGG 0.166165 8.4:-80666156 MS.gene022543:CDS
TGCACAAAGTGATATGTAAT+TGG 0.184770 8.4:+80663267 None:intergenic
TGGCACAAGAATGGCACTTT+TGG 0.214514 8.4:-80666384 MS.gene022543:CDS
TGGTTTGTATATTGTACTTT+GGG 0.221964 8.4:-80662715 MS.gene022543:CDS
ATCAACAACATAACTATTAT+TGG 0.259697 8.4:+80666434 None:intergenic
CACAATAATTTGTACTGTAT+TGG 0.284384 8.4:-80662929 MS.gene022543:CDS
TATTCTGCATTTAGTAGCTT+TGG 0.290492 8.4:+80665213 None:intergenic
TTCTTGGATGCATTGTTGCT+TGG 0.293997 8.4:-80665116 MS.gene022543:CDS
AGAGGAAGTGAAAATTGATT+TGG 0.299737 8.4:-80662628 MS.gene022543:CDS
AATTAATCTTCCATGCATTA+AGG 0.305242 8.4:+80663185 None:intergenic
TCTTGGATGCATTGTTGCTT+GGG 0.331416 8.4:-80665115 MS.gene022543:CDS
TTGATACAGTTCATACTTGC+AGG 0.337079 8.4:-80666416 MS.gene022543:CDS
TTGGTTTGTATATTGTACTT+TGG 0.366744 8.4:-80662716 MS.gene022543:CDS
CATGTATGTTATAGCTTGAT+AGG 0.374262 8.4:-80662756 MS.gene022543:intron
TATGATATTCATTTATTCTC+TGG 0.383863 8.4:+80662591 None:intergenic
TATTTCCTCATGAAGCAAAA+TGG 0.415481 8.4:+80662903 None:intergenic
TCAATCATGGCCACAACCTT+GGG 0.417804 8.4:-80665174 MS.gene022543:CDS
GAGAACTATAGCCAAAATAG+TGG 0.417858 8.4:-80665286 MS.gene022543:CDS
TATTCATCACCTCACTAATT+GGG 0.429304 8.4:-80666155 MS.gene022543:intron
ATCTTCCATGCATTAAGGTC+TGG 0.430798 8.4:+80663190 None:intergenic
CGGTATACTACAAATACTCT+TGG 0.434195 8.4:+80666350 None:intergenic
TTTGTAATAGCAGCCTTAGT+AGG 0.434206 8.4:-80665427 MS.gene022543:CDS
GGTGCAATTGGAGTGATCAT+TGG 0.438089 8.4:-80662735 MS.gene022543:CDS
GTACAAATTATTGTGAAAAC+AGG 0.442998 8.4:+80662937 None:intergenic
CATTTATTCTCTGGTAAAAG+AGG 0.446998 8.4:+80662600 None:intergenic
ATCAATCATGGCCACAACCT+TGG 0.447093 8.4:-80665175 MS.gene022543:CDS
TTCAAGCATGGTGCATTTCA+AGG 0.449157 8.4:-80662990 MS.gene022543:CDS
TTCCTCTTGCTTATTTATCA+GGG 0.455915 8.4:-80666301 MS.gene022543:intron
TATAGCTTGATAGGTGCAAT+TGG 0.462823 8.4:-80662747 MS.gene022543:intron
AGTATCTATTGCATTGTTGA+AGG 0.465625 8.4:-80665238 MS.gene022543:CDS
CCTTGGGAAGTGATGAGAAT+TGG 0.468318 8.4:-80665158 MS.gene022543:CDS
TGTGACTGCTGGAAGAAGAT+TGG 0.474246 8.4:+80665450 None:intergenic
CTCATCACTTCCCAAGGTTG+TGG 0.492623 8.4:+80665164 None:intergenic
ATACTTGCAGGTCAGACTCT+TGG 0.509818 8.4:-80666404 MS.gene022543:CDS
GCACAAAGTGATATGTAATT+GGG 0.510073 8.4:+80663268 None:intergenic
ATTACATATCACTTTGTGCA+TGG 0.514897 8.4:-80663264 MS.gene022543:CDS
GCTATTACAAATGTGACTGC+TGG 0.515370 8.4:+80665439 None:intergenic
GACTAGTAATTACCCTACTA+AGG 0.515800 8.4:+80665414 None:intergenic
TGCTGGAAGAAGATTGGAAA+TGG 0.517028 8.4:+80665456 None:intergenic
ATTACCTTCAAAATCAATCA+TGG 0.519905 8.4:-80665187 MS.gene022543:CDS
GGTATACTACAAATACTCTT+GGG 0.524786 8.4:+80666351 None:intergenic
CAGCGCTACCAAGTTGAAGT+AGG 0.525332 8.4:+80663161 None:intergenic
AGTGATGAGAATTGGTTGCT+TGG 0.525946 8.4:-80665150 MS.gene022543:CDS
TTGTAATAGCAGCCTTAGTA+GGG 0.526679 8.4:-80665426 MS.gene022543:intron
GGAACAATTATATGTGTAAG+TGG 0.530656 8.4:-80665264 MS.gene022543:CDS
TCAGACTCTTGGCACAAGAA+TGG 0.551895 8.4:-80666393 MS.gene022543:CDS
CCAATTCTCATCACTTCCCA+AGG 0.553764 8.4:+80665158 None:intergenic
TTGGGATGACTTGCATAAGC+TGG 0.554443 8.4:+80663286 None:intergenic
GTATCTATTGCATTGTTGAA+GGG 0.561664 8.4:-80665237 MS.gene022543:CDS
CTTCATGAGGAAATATACGT+TGG 0.565456 8.4:-80662895 MS.gene022543:CDS
ATTAATTCCCTACTTCAACT+TGG 0.571381 8.4:-80663169 MS.gene022543:CDS
GGTTTGTATATTGTACTTTG+GGG 0.583776 8.4:-80662714 MS.gene022543:CDS
ATGAGGAAATATACGTTGGA+AGG 0.583813 8.4:-80662891 MS.gene022543:intron
TACCCTGATAAATAAGCAAG+AGG 0.584882 8.4:+80666299 None:intergenic
TAGAGCCAGACCTTAATGCA+TGG 0.585991 8.4:-80663195 MS.gene022543:CDS
GAAGATAGTTCCAAAATCGA+TGG 0.588416 8.4:-80662661 MS.gene022543:CDS
TAATATATTGTCTTCAAGCA+TGG 0.593863 8.4:-80663002 MS.gene022543:CDS
AGCGCTACCAAGTTGAAGTA+GGG 0.593953 8.4:+80663162 None:intergenic
AGAACTATAGCCAAAATAGT+GGG 0.616313 8.4:-80665285 MS.gene022543:CDS
ACAACATAACTATTATTGGT+AGG 0.617442 8.4:+80666438 None:intergenic
GTAAACATAGCAGAGAAGAG+AGG 0.639250 8.4:+80662961 None:intergenic
GCATGGTGCATTTCAAGGAG+AGG 0.640869 8.4:-80662985 MS.gene022543:CDS
ATCGATGGTTAATGAGACAG+AGG 0.643418 8.4:-80662646 MS.gene022543:CDS
TTTGAGGAAGAAAAGATGGG+GGG 0.646206 8.4:-80666482 None:intergenic
GGAAACAAACCCAATTAGTG+AGG 0.653573 8.4:+80666146 None:intergenic
AGCAAGAGGAACAAGAACAA+TGG 0.659708 8.4:+80666313 None:intergenic
TAGTGAGGTGATGAATAACA+AGG 0.667455 8.4:+80666161 None:intergenic
AGAGTATTTGTAGTATACCG+TGG 0.702160 8.4:-80666347 MS.gene022543:CDS
CAATGGTTGCAAAAGCACCA+CGG 0.718729 8.4:+80666330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATCTATATTTGA+TGG + chr8.4:80664110-80664129 None:intergenic 10.0%
!! TTAGTTAGATTAATAATAAT+TGG + chr8.4:80666275-80666294 None:intergenic 10.0%
!!! AATCAAAATTTATATTTTGA+GGG - chr8.4:80663555-80663574 MS.gene022543:intron 10.0%
!!! ATACTAGTTAATATTTTATA+TGG + chr8.4:80665444-80665463 None:intergenic 10.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8.4:80664645-80664664 None:intergenic 15.0%
!! AAGAAAAAAACAATAAGTTA+AGG + chr8.4:80662833-80662852 None:intergenic 15.0%
!! AATAATTAAAATAAACACCT+TGG + chr8.4:80663710-80663729 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8.4:80664644-80664663 MS.gene022543:intron 15.0%
!! ATTATTTAGTCAAACAAAAA+AGG + chr8.4:80663165-80663184 None:intergenic 15.0%
!! ATTGTAAAACGAATATAATT+TGG - chr8.4:80665289-80665308 MS.gene022543:CDS 15.0%
!! TTGAATAATATATTACAGAA+TGG - chr8.4:80663735-80663754 MS.gene022543:intron 15.0%
!! TTGTAAAACGAATATAATTT+GGG - chr8.4:80665290-80665309 MS.gene022543:CDS 15.0%
!! TTGTTAGAAAAGAATAATTA+AGG + chr8.4:80664217-80664236 None:intergenic 15.0%
!!! AAATTTTTTTCTTCCTAAAA+TGG - chr8.4:80664768-80664787 MS.gene022543:intron 15.0%
!!! AAGGTGTTTATTTTAATTAT+TGG - chr8.4:80663709-80663728 MS.gene022543:intron 15.0%
!!! AATTAATACATTATTTTGCA+GGG - chr8.4:80666024-80666043 MS.gene022543:intron 15.0%
!!! ATATACTTTTATTGATGAAT+TGG - chr8.4:80663349-80663368 MS.gene022543:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr8.4:80664518-80664537 None:intergenic 15.0%
!!! GAATCAAAATTTATATTTTG+AGG - chr8.4:80663554-80663573 MS.gene022543:intron 15.0%
!!! TAATTAATACATTATTTTGC+AGG - chr8.4:80666023-80666042 MS.gene022543:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8.4:80664621-80664640 None:intergenic 15.0%
!!! TATACTTTTATTGATGAATT+GGG - chr8.4:80663350-80663369 MS.gene022543:intron 15.0%
!!! TCTTTTCATTTTATATTAGA+TGG - chr8.4:80665078-80665097 MS.gene022543:intron 15.0%
!!! TTTTTCCATATCATTTATTA+AGG + chr8.4:80665187-80665206 None:intergenic 15.0%
!!! TTTTTTTTGATTTGAAAGAA+TGG - chr8.4:80663265-80663284 MS.gene022543:CDS 15.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8.4:80664635-80664654 MS.gene022543:intron 20.0%
!! AAATGACTAAAAAAATCTCA+AGG + chr8.4:80664160-80664179 None:intergenic 20.0%
!! AAATGGCATATAATTAAGAA+TGG - chr8.4:80664785-80664804 MS.gene022543:intron 20.0%
!! AAGAAAAAAACAACTGTATT+TGG - chr8.4:80663081-80663100 MS.gene022543:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr8.4:80664678-80664697 None:intergenic 20.0%
!! AATTAAAGAATTGAAAGAAG+AGG - chr8.4:80665210-80665229 MS.gene022543:CDS 20.0%
!! AGAAAAAAACAACTGTATTT+GGG - chr8.4:80663082-80663101 MS.gene022543:intron 20.0%
!! ATCAACAACATAACTATTAT+TGG + chr8.4:80662635-80662654 None:intergenic 20.0%
!! ATTGTCCTTAATAAATAGTA+TGG - chr8.4:80664359-80664378 MS.gene022543:intron 20.0%
!! ATTGTCCTTAATAAATGATA+TGG - chr8.4:80665179-80665198 MS.gene022543:CDS 20.0%
!! GGAAAAGTAATAAATAGTTA+AGG - chr8.4:80664408-80664427 MS.gene022543:intron 20.0%
!! TATGAGAAAATATGCATTTA+AGG + chr8.4:80665705-80665724 None:intergenic 20.0%
!! TTTGATTGAGTAACAAAAAT+AGG + chr8.4:80663680-80663699 None:intergenic 20.0%
!!! AAATCTATATTTGATGGTTA+TGG + chr8.4:80664104-80664123 None:intergenic 20.0%
!!! AGAATAGATTTTTTTGTAAG+AGG - chr8.4:80663218-80663237 MS.gene022543:CDS 20.0%
!!! ATCTCAAGGTATTTATAAAA+AGG + chr8.4:80664146-80664165 None:intergenic 20.0%
!!! CTTAACACAAATTGAATTTT+AGG - chr8.4:80666240-80666259 MS.gene022543:intron 20.0%
!!! CTTTTCCATACTATTTATTA+AGG + chr8.4:80664367-80664386 None:intergenic 20.0%
!!! TCTTAATTATATGCCATTTT+AGG + chr8.4:80664784-80664803 None:intergenic 20.0%
! AAGCGACATATAATTTAGAA+CGG - chr8.4:80665327-80665346 MS.gene022543:intron 25.0%
! AATTAATCTTCCATGCATTA+AGG + chr8.4:80665884-80665903 None:intergenic 25.0%
! ACAACATAACTATTATTGGT+AGG + chr8.4:80662631-80662650 None:intergenic 25.0%
! AGAAACTAATTAAAGAGAAG+TGG + chr8.4:80662803-80662822 None:intergenic 25.0%
! ATTACCTTCAAAATCAATCA+TGG - chr8.4:80663879-80663898 MS.gene022543:intron 25.0%
! CAAAAGGTTTATGTCAAATA+TGG - chr8.4:80664018-80664037 MS.gene022543:intron 25.0%
! GAGGTAGTAATAAATAGTTA+AGG - chr8.4:80665229-80665248 MS.gene022543:CDS 25.0%
! GCTCTTATTCCTTAAATTTA+AGG - chr8.4:80662875-80662894 MS.gene022543:intron 25.0%
! GGAAAAACTCCTTAAATTTA+AGG + chr8.4:80662887-80662906 None:intergenic 25.0%
! GGAAAAAGTTATTATTGCAT+TGG + chr8.4:80664558-80664577 None:intergenic 25.0%
! GTACAAATTATTGTGAAAAC+AGG + chr8.4:80666132-80666151 None:intergenic 25.0%
! TAATATATTGTCTTCAAGCA+TGG - chr8.4:80666064-80666083 MS.gene022543:intron 25.0%
! TAGAAAAGAATAATTAAGGC+AGG + chr8.4:80664213-80664232 None:intergenic 25.0%
! TTCTTTGTCAAATTGATGAA+AGG + chr8.4:80663202-80663221 None:intergenic 25.0%
!! CACAATAATTTGTACTGTAT+TGG - chr8.4:80666137-80666156 MS.gene022543:intron 25.0%
!! TATAATTGTTCCCACTATTT+TGG + chr8.4:80663794-80663813 None:intergenic 25.0%
!! TATATGGGTGAAACTATTTT+TGG + chr8.4:80665544-80665563 None:intergenic 25.0%
!! TGGTTTGTATATTGTACTTT+GGG - chr8.4:80666351-80666370 MS.gene022543:CDS 25.0%
!! TTCTAAATTATATGTCGCTT+TGG + chr8.4:80665327-80665346 None:intergenic 25.0%
!!! AGTATTTTTTGTTAACTCTC+TGG - chr8.4:80665459-80665478 MS.gene022543:CDS 25.0%
!!! GTTTTTTTCTTCATTTTGAC+AGG - chr8.4:80662842-80662861 MS.gene022543:intron 25.0%
!!! TTGGTTTGTATATTGTACTT+TGG - chr8.4:80666350-80666369 MS.gene022543:CDS 25.0%
ACACGTCATATAATTTGAGA+CGG + chr8.4:80664257-80664276 None:intergenic 30.0%
ACTATGTGGTGCTTATAAAA+TGG - chr8.4:80663448-80663467 MS.gene022543:intron 30.0%
AGAACCTGAGTTTGATATAT+GGG + chr8.4:80665559-80665578 None:intergenic 30.0%
AGAACTATAGCCAAAATAGT+GGG - chr8.4:80663781-80663800 MS.gene022543:intron 30.0%
AGAGGAACCAACATTATTAA+TGG + chr8.4:80664912-80664931 None:intergenic 30.0%
AGAGGAAGTGAAAATTGATT+TGG - chr8.4:80666438-80666457 MS.gene022543:CDS 30.0%
AGTATCTATTGCATTGTTGA+AGG - chr8.4:80663828-80663847 MS.gene022543:intron 30.0%
ATTAATGGCTTCTCAATGAT+GGG + chr8.4:80664897-80664916 None:intergenic 30.0%
ATTAATTCCCTACTTCAACT+TGG - chr8.4:80665897-80665916 MS.gene022543:intron 30.0%
ATTACATATCACTTTGTGCA+TGG - chr8.4:80665802-80665821 MS.gene022543:intron 30.0%
CAAACAGATGGAGTAATAAA+TGG - chr8.4:80664844-80664863 MS.gene022543:intron 30.0%
CATGTATGTTATAGCTTGAT+AGG - chr8.4:80666310-80666329 MS.gene022543:CDS 30.0%
CATTTATTCTCTGGTAAAAG+AGG + chr8.4:80666469-80666488 None:intergenic 30.0%
CCTAATTCATCGTTACAAAA+TGG + chr8.4:80665649-80665668 None:intergenic 30.0%
CTAAATTATCAGCACAGTTA+TGG + chr8.4:80663120-80663139 None:intergenic 30.0%
CTCAATCAAAATTCAAACCA+AGG - chr8.4:80663690-80663709 MS.gene022543:intron 30.0%
GCACAAAGTGATATGTAATT+GGG + chr8.4:80665801-80665820 None:intergenic 30.0%
GGAACAATTATATGTGTAAG+TGG - chr8.4:80663802-80663821 MS.gene022543:intron 30.0%
GGTATACTACAAATACTCTT+GGG + chr8.4:80662718-80662737 None:intergenic 30.0%
GGTTTGTATATTGTACTTTG+GGG - chr8.4:80666352-80666371 MS.gene022543:CDS 30.0%
GTAAATTACTAGAGAGAGAA+TGG + chr8.4:80662944-80662963 None:intergenic 30.0%
GTATCTATTGCATTGTTGAA+GGG - chr8.4:80663829-80663848 MS.gene022543:intron 30.0%
TACCTGGTGAAAAGTAAAAA+GGG + chr8.4:80665760-80665779 None:intergenic 30.0%
TATTAATGGCTTCTCAATGA+TGG + chr8.4:80664898-80664917 None:intergenic 30.0%
TATTCATCACCTCACTAATT+GGG - chr8.4:80662911-80662930 MS.gene022543:CDS 30.0%
TATTCTGCATTTAGTAGCTT+TGG + chr8.4:80663856-80663875 None:intergenic 30.0%
TATTTCCTCATGAAGCAAAA+TGG + chr8.4:80666166-80666185 None:intergenic 30.0%
TGAGAAGCCATTAATAATGT+TGG - chr8.4:80664902-80664921 MS.gene022543:intron 30.0%
TGCACAAAGTGATATGTAAT+TGG + chr8.4:80665802-80665821 None:intergenic 30.0%
TTATTCATCACCTCACTAAT+TGG - chr8.4:80662910-80662929 MS.gene022543:CDS 30.0%
TTCCTCTTGCTTATTTATCA+GGG - chr8.4:80662765-80662784 MS.gene022543:intron 30.0%
! CCATTTTGTAACGATGAATT+AGG - chr8.4:80665646-80665665 MS.gene022543:intron 30.0%
! GACATATAATTTAGAACGGA+GGG - chr8.4:80665331-80665350 MS.gene022543:intron 30.0%
! GCATGTGTTGTTAGTAATTT+AGG - chr8.4:80665042-80665061 MS.gene022543:intron 30.0%
! TTTTTCTATCTATGTCCTAG+AGG + chr8.4:80664930-80664949 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8.4:80664727-80664746 MS.gene022543:intron 30.0%
!! ATTATTTTGCAGGGAGTTAT+GGG - chr8.4:80666033-80666052 MS.gene022543:intron 30.0%
!! TGGTTGATAAGCTTAACAAA+AGG + chr8.4:80665596-80665615 None:intergenic 30.0%
!! TTAATAATGTTGGTTCCTCT+AGG - chr8.4:80664912-80664931 MS.gene022543:intron 30.0%
!!! TAAAGTTTTGAGTGACTATG+TGG - chr8.4:80663434-80663453 MS.gene022543:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8.4:80664726-80664745 None:intergenic 30.0%
AAAAGTAAAAAGGGAGGCAA+AGG + chr8.4:80665751-80665770 None:intergenic 35.0%
AGGAAAAGACTCTGGTAATT+CGG - chr8.4:80665489-80665508 MS.gene022543:CDS 35.0%
ATCGATACTCTGACATCAAA+AGG - chr8.4:80664002-80664021 MS.gene022543:intron 35.0%
ATGAGGAAATATACGTTGGA+AGG - chr8.4:80666175-80666194 MS.gene022543:CDS 35.0%
ATGCTTGGTTTATAGACACA+CGG - chr8.4:80663406-80663425 MS.gene022543:intron 35.0%
CGGTATACTACAAATACTCT+TGG + chr8.4:80662719-80662738 None:intergenic 35.0%
CTTCATGAGGAAATATACGT+TGG - chr8.4:80666171-80666190 MS.gene022543:CDS 35.0%
GAAGATAGTTCCAAAATCGA+TGG - chr8.4:80666405-80666424 MS.gene022543:CDS 35.0%
GACTAGTAATTACCCTACTA+AGG + chr8.4:80663655-80663674 None:intergenic 35.0%
GAGAACCTGAGTTTGATATA+TGG + chr8.4:80665560-80665579 None:intergenic 35.0%
GAGAACTATAGCCAAAATAG+TGG - chr8.4:80663780-80663799 MS.gene022543:intron 35.0%
GTACCTGGTGAAAAGTAAAA+AGG + chr8.4:80665761-80665780 None:intergenic 35.0%
GTAGTGTGCTGAGTATTAAT+TGG + chr8.4:80664596-80664615 None:intergenic 35.0%
GTTCCTCTTGCTTATTTATC+AGG - chr8.4:80662764-80662783 MS.gene022543:intron 35.0%
TACCCTGATAAATAAGCAAG+AGG + chr8.4:80662770-80662789 None:intergenic 35.0%
TAGTGAGGTGATGAATAACA+AGG + chr8.4:80662908-80662927 None:intergenic 35.0%
TATAGCTTGATAGGTGCAAT+TGG - chr8.4:80666319-80666338 MS.gene022543:CDS 35.0%
TGAGATTCTTCACTTATGCT+TGG - chr8.4:80663391-80663410 MS.gene022543:intron 35.0%
TGTGCTGAGTATTAATTGGA+GGG + chr8.4:80664592-80664611 None:intergenic 35.0%
TTCACCCATATATCAAACTC+AGG - chr8.4:80665552-80665571 MS.gene022543:intron 35.0%
TTGATACAGTTCATACTTGC+AGG - chr8.4:80662650-80662669 MS.gene022543:CDS 35.0%
TTGTAATAGCAGCCTTAGTA+GGG - chr8.4:80663640-80663659 MS.gene022543:intron 35.0%
TTTGTAATAGCAGCCTTAGT+AGG - chr8.4:80663639-80663658 MS.gene022543:intron 35.0%
! AATTGGAGGGTACAATTGAA+AGG + chr8.4:80664579-80664598 None:intergenic 35.0%
! AGAGTATTTGTAGTATACCG+TGG - chr8.4:80662719-80662738 MS.gene022543:CDS 35.0%
! CGACATATAATTTAGAACGG+AGG - chr8.4:80665330-80665349 MS.gene022543:intron 35.0%
! GGCAATTTTTCTCATTTTGC+AGG - chr8.4:80663972-80663991 MS.gene022543:intron 35.0%
! GTCATATAATTTGAGACGGA+GGG + chr8.4:80664253-80664272 None:intergenic 35.0%
! TACTCCATCTGTTTGAAGTT+GGG + chr8.4:80664839-80664858 None:intergenic 35.0%
! TTACTCCATCTGTTTGAAGT+TGG + chr8.4:80664840-80664859 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8.4:80664492-80664511 None:intergenic 35.0%
!! CATTATTTTGCAGGGAGTTA+TGG - chr8.4:80666032-80666051 MS.gene022543:intron 35.0%
!! CATTTTGACAGGAGAAATTC+TGG - chr8.4:80662853-80662872 MS.gene022543:intron 35.0%
!!! AACGACACTCATTTTGAAAC+GGG - chr8.4:80664728-80664747 MS.gene022543:intron 35.0%
!!! GTCTCATTAACCATCGATTT+TGG + chr8.4:80666418-80666437 None:intergenic 35.0%
AACAAAAGGATGAGTCGTTC+AGG + chr8.4:80665582-80665601 None:intergenic 40.0%
AAGACCCAACTTCAAACAGA+TGG - chr8.4:80664832-80664851 MS.gene022543:intron 40.0%
ACACATGCTAACATGTGATC+TGG - chr8.4:80665017-80665036 MS.gene022543:intron 40.0%
AGCAAGAGGAACAAGAACAA+TGG + chr8.4:80662756-80662775 None:intergenic 40.0%
AGCGAAATCACTAGGTTAAC+TGG - chr8.4:80665620-80665639 MS.gene022543:intron 40.0%
AGTGATGAGAATTGGTTGCT+TGG - chr8.4:80663916-80663935 MS.gene022543:intron 40.0%
ATCGATGGTTAATGAGACAG+AGG - chr8.4:80666420-80666439 MS.gene022543:CDS 40.0%
ATCTTCCATGCATTAAGGTC+TGG + chr8.4:80665879-80665898 None:intergenic 40.0%
CAACTGTATTTGGGCTGATT+TGG - chr8.4:80663091-80663110 MS.gene022543:intron 40.0%
CTGGTGAAAAGTAAAAAGGG+AGG + chr8.4:80665757-80665776 None:intergenic 40.0%
GCTATTACAAATGTGACTGC+TGG + chr8.4:80663630-80663649 None:intergenic 40.0%
GGAAACAAACCCAATTAGTG+AGG + chr8.4:80662923-80662942 None:intergenic 40.0%
GTAAACATAGCAGAGAAGAG+AGG + chr8.4:80666108-80666127 None:intergenic 40.0%
GTCAGTCTATACTTACCTCA+CGG + chr8.4:80665522-80665541 None:intergenic 40.0%
GTGTGCTGAGTATTAATTGG+AGG + chr8.4:80664593-80664612 None:intergenic 40.0%
GTTCTTAGAGGAAAAGACTC+TGG - chr8.4:80665481-80665500 MS.gene022543:CDS 40.0%
TGCTGGAAGAAGATTGGAAA+TGG + chr8.4:80663613-80663632 None:intergenic 40.0%
TTCAAGCATGGTGCATTTCA+AGG - chr8.4:80666076-80666095 MS.gene022543:intron 40.0%
TTCTTGGATGCATTGTTGCT+TGG - chr8.4:80663950-80663969 MS.gene022543:intron 40.0%
! ACAAGAATGGCACTTTTGGA+GGG - chr8.4:80662686-80662705 MS.gene022543:CDS 40.0%
! ATAATTTGAGACGGAGGGAA+TGG + chr8.4:80664248-80664267 None:intergenic 40.0%
! CGTCATATAATTTGAGACGG+AGG + chr8.4:80664254-80664273 None:intergenic 40.0%
! GAAACGGGGGAGTATAATTT+AGG - chr8.4:80664743-80664762 MS.gene022543:intron 40.0%
! TCTTGGATGCATTGTTGCTT+GGG - chr8.4:80663951-80663970 MS.gene022543:intron 40.0%
!! CTCCCTTTTTACTTTTCACC+AGG - chr8.4:80665755-80665774 MS.gene022543:intron 40.0%
!! GTGGCCATGATTGATTTTGA+AGG + chr8.4:80663886-80663905 None:intergenic 40.0%
!! GTTAACTCTCTGGTTCTTAG+AGG - chr8.4:80665469-80665488 MS.gene022543:CDS 40.0%
!!! ACGACACTCATTTTGAAACG+GGG - chr8.4:80664729-80664748 MS.gene022543:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8.4:80664488-80664507 None:intergenic 40.0%
ACCAGATGAGCGAAATCACT+AGG - chr8.4:80665612-80665631 MS.gene022543:intron 45.0%
ACCTAGTGATTTCGCTCATC+TGG + chr8.4:80665616-80665635 None:intergenic 45.0%
AGCGCTGTATATGCTGTATG+TGG - chr8.4:80665921-80665940 MS.gene022543:intron 45.0%
ATACTTGCAGGTCAGACTCT+TGG - chr8.4:80662662-80662681 MS.gene022543:CDS 45.0%
ATCAATCATGGCCACAACCT+TGG - chr8.4:80663891-80663910 MS.gene022543:intron 45.0%
CCAATTCTCATCACTTCCCA+AGG + chr8.4:80663911-80663930 None:intergenic 45.0%
CCTTGGGAAGTGATGAGAAT+TGG - chr8.4:80663908-80663927 MS.gene022543:intron 45.0%
CTTGGATGTCTGTCTCTTCT+TGG - chr8.4:80663934-80663953 MS.gene022543:intron 45.0%
GACTCTGGTAATTCGGAGTT+CGG - chr8.4:80665496-80665515 MS.gene022543:CDS 45.0%
GGTGCAATTGGAGTGATCAT+TGG - chr8.4:80666331-80666350 MS.gene022543:CDS 45.0%
TAGAGCCAGACCTTAATGCA+TGG - chr8.4:80665871-80665890 MS.gene022543:intron 45.0%
TCAATCATGGCCACAACCTT+GGG - chr8.4:80663892-80663911 MS.gene022543:intron 45.0%
TCAGACTCTTGGCACAAGAA+TGG - chr8.4:80662673-80662692 MS.gene022543:CDS 45.0%
TGTGACTGCTGGAAGAAGAT+TGG + chr8.4:80663619-80663638 None:intergenic 45.0%
! AATGGCTTCTCAATGATGGG+TGG + chr8.4:80664894-80664913 None:intergenic 45.0%
! AGCGCTACCAAGTTGAAGTA+GGG + chr8.4:80665907-80665926 None:intergenic 45.0%
! CACAAGAATGGCACTTTTGG+AGG - chr8.4:80662685-80662704 MS.gene022543:CDS 45.0%
! TGGCACAAGAATGGCACTTT+TGG - chr8.4:80662682-80662701 MS.gene022543:CDS 45.0%
! TTGGGATGACTTGCATAAGC+TGG + chr8.4:80665783-80665802 None:intergenic 45.0%
!! ATGGCTTCTCAATGATGGGT+GGG + chr8.4:80664893-80664912 None:intergenic 45.0%
!! CAATGGTTGCAAAAGCACCA+CGG + chr8.4:80662739-80662758 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8.4:80664749-80664730 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+GGG - chr8.4:80664730-80664749 MS.gene022543:intron 45.0%
!! AAATAACATTAATAATTTAT+TGG - chr8.4:80664443-80664462 MS.gene022543:intron 5.0%
!! ATTAATTAAATAATTGAAAA+AGG - chr8.4:80664387-80664406 MS.gene022543:intron 5.0%
CTCATCACTTCCCAAGGTTG+TGG + chr8.4:80663905-80663924 None:intergenic 50.0%
GACTTGCATAAGCTGGTACC+TGG + chr8.4:80665776-80665795 None:intergenic 50.0%
GCATGGTGCATTTCAAGGAG+AGG - chr8.4:80666081-80666100 MS.gene022543:intron 50.0%
! CAGCGCTACCAAGTTGAAGT+AGG + chr8.4:80665908-80665927 None:intergenic 50.0%
!! TGGCTTCTCAATGATGGGTG+GGG + chr8.4:80664892-80664911 None:intergenic 50.0%
!!! GGCTGCCATTTTGCTTCATG+AGG - chr8.4:80666158-80666177 MS.gene022543:CDS 50.0%
TAATTCGGAGTTCGGCCGTG+AGG - chr8.4:80665504-80665523 MS.gene022543:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 80662599 80666489 80662599 ID=MS.gene022543
chr8.4 mRNA 80662599 80666489 80662599 ID=MS.gene022543.t1;Parent=MS.gene022543
chr8.4 exon 80666302 80666489 80666302 ID=MS.gene022543.t1.exon1;Parent=MS.gene022543.t1
chr8.4 CDS 80666302 80666489 80666302 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80666156 80666224 80666156 ID=MS.gene022543.t1.exon2;Parent=MS.gene022543.t1
chr8.4 CDS 80666156 80666224 80666156 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80665427 80665543 80665427 ID=MS.gene022543.t1.exon3;Parent=MS.gene022543.t1
chr8.4 CDS 80665427 80665543 80665427 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80665095 80665335 80665095 ID=MS.gene022543.t1.exon4;Parent=MS.gene022543.t1
chr8.4 CDS 80665095 80665335 80665095 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80663153 80663311 80663153 ID=MS.gene022543.t1.exon5;Parent=MS.gene022543.t1
chr8.4 CDS 80663153 80663311 80663153 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80662892 80663043 80662892 ID=MS.gene022543.t1.exon6;Parent=MS.gene022543.t1
chr8.4 CDS 80662892 80663043 80662892 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
chr8.4 exon 80662599 80662764 80662599 ID=MS.gene022543.t1.exon7;Parent=MS.gene022543.t1
chr8.4 CDS 80662599 80662764 80662599 ID=cds.MS.gene022543.t1;Parent=MS.gene022543.t1
Gene Sequence

>MS.gene022543

ATGGGGGGAGGTTTAAACATGGAGTACTACCTACCAATAATAGTTATGTTGTTGATACAGTTCATACTTGCAGGTCAGACTCTTGGCACAAGAATGGCACTTTTGGAGGGTATGAGCCCAAGAGTATTTGTAGTATACCGTGGTGCTTTTGCAACCATTGTTCTTGTTCCTCTTGCTTATTTATCAGGGTAATTTAATTTACCACTTCTCTTTAATTAGTTTCTTGTTATTCCTTAACTTATTGTTTTTTTCTTCATTTTGACAGGAGAAATTCTGGCTCTTATTCCTTAAATTTAAGGAGTTTTTCCTTGTTATTCATCACCTCACTAATTGGGTTTGTTTCCATTCTCTCTCTAGTAATTTACATCGATCTCTCAACAAACACTGACTGTATCAAAGAAACGTCAGACATTTTTTTTTTTACTCAATTGTGTTCATATCAGATAGATATTCAACTATTTGAGCTGATTTGATTTGTTTCAAAGAAAAAAACAACTGTATTTGGGCTGATTTGGTTGCCATAACTGTGCTGATAATTTAGACGCGCAATAATTTATCTTTGACCTTTTTTGTTTGACTAAATAATTTGTATTTGACTATCCTTTCATCAATTTGACAAAGAATAGATTTTTTTGTAAGAGGAATATGACAAAGAATAGTTTTTTTTTTTTTTTGATTTGAAAGAATGGCTAAGAATAGTTAAAATTACATTGAAGTCAAGTTTATATTTAAATATTGTAAAAAATATATATATACTTTTATTGATGAATTGGGAGTCTTGATTTGCTTAATTGAGATTCTTCACTTATGCTTGGTTTATAGACACACGGTGTCTTAAAGTTTTGAGTGACTATGTGGTGCTTATAAAATGGTGTTTTGCATTTGTACGATTGATTAGAAGTGTTTTCACTCTCTTTTGTTGTTTCTGTTGTGATATGTGTTGCAGCATTACATTGAATCAAAATTTATATTTTGAGGGTCTATATCTTTCTTCTTCTTCAGCTGCAAGTGCCATTTCCAATCTTCTTCCAGCAGTCACATTTGTAATAGCAGCCTTAGTAGGGTAATTACTAGTCAACCTATTTTTGTTACTCAATCAAAATTCAAACCAAGGTGTTTATTTTAATTATTGGAAATTGAATAATATATTACAGAATGGAGAAAATGAATATTCGAAGTATGAGAACTATAGCCAAAATAGTGGGAACAATTATATGTGTAAGTGGAGCAGTATCTATTGCATTGTTGAAGGGTCCAAAGCTACTAAATGCAGAATACAAATTACCTTCAAAATCAATCATGGCCACAACCTTGGGAAGTGATGAGAATTGGTTGCTTGGATGTCTGTCTCTTCTTGGATGCATTGTTGCTTGGGCAATTTTTCTCATTTTGCAGGTATTTTAATCGATACTCTGACATCAAAAGGTTTATGTCAAATATGGTATTTTTTTAATTTTTGTGTATTTTTTATATATGTGTAAGTAACAAAACTTTAATTGTGTCCATAACCATCAAATATAGATTTTTTTTTTTTTTTATAAATACCTTTTTATAAATACCTTGAGATTTTTTTAGTCATTTTCTATAGAATCTATTTCGAATTTGTAACTGCCTGCCTTAATTATTCTTTTCTAACAATTTTCTAACCATTCCCTCCGTCTCAAATTATATGACGTGTTTTGACTTTTGAGCATTTCACACGTATTAAAAAATGTAATTAATTTTGTATGAGAAAAATATATTATGAGTTGTTTTACAAAATTGTCCTTAATAAATAGTATGGAAAAGATTAATTAAATAATTGAAAAAGGAAAAGTAATAAATAGTTAAGGATATAATATAAAAAATAACATTAATAATTTATTGGTATTGTAAAACGACATACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAAATTGTTTCAAAATGAATGTCACTTTCAGTTTCCAATGCAATAATAACTTTTTCCTTTCAATTGTACCCTCCAATTAATACTCAGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTGGCAAAATAACCATTCTCTTTCTTTTAATCATTTCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGGGGAGTATAATTTAGGACAAATTTTTTTCTTCCTAAAATGGCATATAATTAAGAATGGAGTGAGTATTGTGTAAAGCTTAAAAAGACCCAACTTCAAACAGATGGAGTAATAAATGGAGCATTCATCTGATAGTTGTCTCCCCACCCATCATTGAGAAGCCATTAATAATGTTGGTTCCTCTAGGACATAGATAGAAAAATGTCTAATCGAATTAATTATATGTATTTATAGTTTCTTCAAGTTGAGATAAAAATAATATTTTCTAGACACATGCTAACATGTGATCTGGACGCATGTGTTGTTAGTAATTTAGGATAATAAAAATACTCTTTTCATTTTATATTAGATGGCGTTTTGATCATTTCATACGTATTAACAAAGTAATTAATTTTGTATGAGAAAAAAATATTTAAAGTTGTTTTACAAATATTGTCCTTAATAAATGATATGGAAAAAACAAATTAAAGAATTGAAAGAAGAGGTAGTAATAAATAGTTAAGGATATAATATGAAAAGTAATATTAATGCTTTTAATGATATTGTAAAACGAATATAATTTGGGATAATTTTTTTCCAAAGCGACATATAATTTAGAACGGAGGGAGTATGTTGTATCTTTTTCTATGATATATAATAAATATTCAGATGAAAATATTAAGTAATTCTCTCTTGATGATTGAAATTGTTAAACCATATAAAATATTAACTAGTATTTTTTGTTAACTCTCTGGTTCTTAGAGGAAAAGACTCTGGTAATTCGGAGTTCGGCCGTGAGGTAAGTATAGACTGACCAAAAATAGTTTCACCCATATATCAAACTCAGGTTCTCCTGAACGACTCATCCTTTTGTTAAGCTTATCAACCAGATGAGCGAAATCACTAGGTTAACTGGTTTCCATTTTGTAACGATGAATTAGGCGCTAGCATAAGAACGTGATAGACTTCATCAATCCTTAAATGCATATTTTCTCATAGAATGCATATTCAGTGAAATTAACCTTTGCCTCCCTTTTTACTTTTCACCAGGTACCAGCTTATGCAAGTCATCCCAATTACATATCACTTTGTGCATGGATGTGTTTCATGTCAACATTACAATCAGCATTAGTGACATTATTCTTAGAGCCAGACCTTAATGCATGGAAGATTAATTCCCTACTTCAACTTGGTAGCGCTGTATATGCTGTATGTGGATGATAAAACAATTTATACTTCTATAAAAAAATTAATTAATATATGTCATATAAATTAATACATCATAAGTGACATTGTTAATTAATACATTATTTTGCAGGGAGTTATGGGATCTGCAGTAATATATTGTCTTCAAGCATGGTGCATTTCAAGGAGAGGACCTCTCTTCTCTGCTATGTTTACTCCTGTTTTCACAATAATTTGTACTGTATTGGCTGCCATTTTGCTTCATGAGGAAATATACGTTGGAAGGTACGTAGTAATAATTAACTTCTGATATATATTAAAGAAGATTCTTAACACAAATTGAATTTTAGGTGATTTTAACCAATTATTATTAATCTAACTAAATGATTCTTCTGCTTCATGTATGTTATAGCTTGATAGGTGCAATTGGAGTGATCATTGGTTTGTATATTGTACTTTGGGGTAAAGCTGAAGAAGTAGTTGATGTTAAAGAGAAGATAGTTCCAAAATCGATGGTTAATGAGACAGAGGAAGTGAAAATTGATTTGGAAGAACCTCTTTTACCAGAGAATAAATGA
Protein sequence

>MS.gene022543.t1

MGGGLNMEYYLPIIVMLLIQFILAGQTLGTRMALLEGMSPRVFVVYRGAFATIVLVPLAYLSGRNSGSYSLNLRSFSLLFITSLIGITLNQNLYFEGLYLSSSSAASAISNLLPAVTFVIAALVGMEKMNIRSMRTIAKIVGTIICVSGAVSIALLKGPKLLNAEYKLPSKSIMATTLGSDENWLLGCLSLLGCIVAWAIFLILQVPAYASHPNYISLCAWMCFMSTLQSALVTLFLEPDLNAWKINSLLQLGSAVYAGVMGSAVIYCLQAWCISRRGPLFSAMFTPVFTIICTVLAAILLHEEIYVGSLIGAIGVIIGLYIVLWGKAEEVVDVKEKIVPKSMVNETEEVKIDLEEPLLPENK