Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022545.t1 | XP_003626706.2 | 94 | 366 | 18 | 4 | 1 | 366 | 13 | 374 | 1.10E-178 | 636 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022545.t1 | Q9M0B8 | 50.3 | 366 | 171 | 4 | 1 | 364 | 1 | 357 | 1.2e-93 | 344.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022545.t1 | G7LBL0 | 94.0 | 366 | 18 | 4 | 1 | 366 | 13 | 374 | 8.0e-179 | 636.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022545 | MS.gene018396 | PPI |
| MS.gene022545 | MS.gene33586 | PPI |
| MS.gene022545 | MS.gene007962 | PPI |
| MS.gene022545 | MS.gene039955 | PPI |
| MS.gene022545 | MS.gene62998 | PPI |
| MS.gene022545 | MS.gene026616 | PPI |
| MS.gene57955 | MS.gene022545 | PPI |
| MS.gene65952 | MS.gene022545 | PPI |
| MS.gene022545 | MS.gene99888 | PPI |
| MS.gene022545 | MS.gene031882 | PPI |
| MS.gene022545 | MS.gene035645 | PPI |
| MS.gene022545 | MS.gene012466 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022545.t1 | MTR_8g006120 | 93.989 | 366 | 18 | 4 | 1 | 366 | 13 | 374 | 0.0 | 630 |
| MS.gene022545.t1 | MTR_2g065550 | 72.603 | 365 | 91 | 7 | 1 | 364 | 13 | 369 | 0.0 | 510 |
| MS.gene022545.t1 | MTR_8g006010 | 67.582 | 364 | 99 | 6 | 1 | 364 | 13 | 357 | 1.76e-167 | 473 |
| MS.gene022545.t1 | MTR_8g006090 | 71.676 | 346 | 95 | 2 | 3 | 348 | 16 | 358 | 2.29e-161 | 456 |
| MS.gene022545.t1 | MTR_8g006050 | 65.301 | 366 | 87 | 8 | 1 | 364 | 14 | 341 | 6.62e-157 | 445 |
| MS.gene022545.t1 | MTR_8g006090 | 73.898 | 295 | 75 | 1 | 3 | 297 | 16 | 308 | 4.31e-142 | 405 |
| MS.gene022545.t1 | MTR_8g006090 | 72.242 | 281 | 75 | 2 | 68 | 348 | 1 | 278 | 4.53e-125 | 361 |
| MS.gene022545.t1 | MTR_4g129650 | 48.907 | 366 | 164 | 7 | 1 | 364 | 11 | 355 | 1.56e-115 | 340 |
| MS.gene022545.t1 | MTR_8g006090 | 74.167 | 240 | 60 | 1 | 3 | 242 | 16 | 253 | 1.48e-108 | 320 |
| MS.gene022545.t1 | MTR_4g129650 | 47.584 | 269 | 120 | 6 | 96 | 364 | 1 | 248 | 3.29e-79 | 244 |
| MS.gene022545.t1 | MTR_6g081840 | 38.793 | 348 | 206 | 3 | 7 | 352 | 19 | 361 | 5.20e-76 | 239 |
| MS.gene022545.t1 | MTR_3g112480 | 37.500 | 384 | 199 | 7 | 2 | 364 | 24 | 387 | 6.19e-75 | 237 |
| MS.gene022545.t1 | MTR_8g006090 | 76.000 | 175 | 40 | 1 | 68 | 242 | 1 | 173 | 2.11e-72 | 224 |
| MS.gene022545.t1 | MTR_8g041390 | 34.930 | 355 | 211 | 7 | 2 | 340 | 17 | 367 | 1.43e-69 | 223 |
| MS.gene022545.t1 | MTR_1g023180 | 35.112 | 356 | 209 | 3 | 1 | 340 | 24 | 373 | 1.93e-69 | 223 |
| MS.gene022545.t1 | MTR_2g016710 | 36.471 | 340 | 204 | 3 | 1 | 340 | 11 | 338 | 1.46e-68 | 220 |
| MS.gene022545.t1 | MTR_3g012420 | 38.138 | 333 | 196 | 6 | 2 | 331 | 21 | 346 | 2.38e-68 | 220 |
| MS.gene022545.t1 | MTR_1g074120 | 38.037 | 326 | 196 | 3 | 3 | 327 | 21 | 341 | 3.61e-66 | 213 |
| MS.gene022545.t1 | MTR_1g073990 | 39.714 | 350 | 199 | 6 | 1 | 349 | 19 | 357 | 6.73e-66 | 213 |
| MS.gene022545.t1 | MTR_2g007960 | 36.061 | 330 | 192 | 4 | 3 | 320 | 17 | 339 | 1.30e-65 | 213 |
| MS.gene022545.t1 | MTR_1g074070 | 36.810 | 326 | 200 | 3 | 3 | 327 | 21 | 341 | 4.26e-65 | 210 |
| MS.gene022545.t1 | MTR_1g074160 | 37.730 | 326 | 197 | 4 | 3 | 327 | 18 | 338 | 1.47e-64 | 209 |
| MS.gene022545.t1 | MTR_1g030580 | 36.338 | 355 | 214 | 5 | 1 | 350 | 19 | 366 | 2.44e-64 | 209 |
| MS.gene022545.t1 | MTR_6g036450 | 35.030 | 334 | 201 | 5 | 1 | 327 | 19 | 343 | 4.93e-64 | 208 |
| MS.gene022545.t1 | MTR_2g102340 | 37.931 | 319 | 193 | 3 | 3 | 320 | 17 | 331 | 5.69e-64 | 208 |
| MS.gene022545.t1 | MTR_1g038560 | 34.412 | 340 | 214 | 3 | 1 | 340 | 6 | 336 | 6.56e-64 | 207 |
| MS.gene022545.t1 | MTR_3g112480 | 37.539 | 317 | 164 | 5 | 66 | 364 | 32 | 332 | 9.35e-64 | 206 |
| MS.gene022545.t1 | MTR_3g072500 | 32.782 | 363 | 230 | 5 | 1 | 352 | 23 | 382 | 6.39e-63 | 206 |
| MS.gene022545.t1 | MTR_1g070175 | 35.294 | 306 | 191 | 3 | 21 | 326 | 39 | 337 | 1.20e-62 | 204 |
| MS.gene022545.t1 | MTR_3g095420 | 33.436 | 326 | 214 | 2 | 1 | 323 | 10 | 335 | 3.82e-62 | 203 |
| MS.gene022545.t1 | MTR_1g114210 | 34.251 | 327 | 211 | 2 | 3 | 329 | 16 | 338 | 8.24e-62 | 202 |
| MS.gene022545.t1 | MTR_0096s0100 | 36.792 | 318 | 196 | 3 | 3 | 319 | 23 | 336 | 2.82e-61 | 201 |
| MS.gene022545.t1 | MTR_1g068630 | 34.062 | 320 | 205 | 4 | 1 | 319 | 18 | 332 | 4.88e-61 | 200 |
| MS.gene022545.t1 | MTR_1g051120 | 34.795 | 342 | 215 | 5 | 1 | 340 | 19 | 354 | 7.94e-61 | 199 |
| MS.gene022545.t1 | MTR_2g007990 | 33.728 | 338 | 198 | 5 | 3 | 329 | 20 | 342 | 1.28e-59 | 197 |
| MS.gene022545.t1 | MTR_3g072530 | 35.362 | 345 | 205 | 6 | 4 | 340 | 20 | 354 | 1.70e-59 | 196 |
| MS.gene022545.t1 | MTR_7g100050 | 33.333 | 351 | 227 | 4 | 1 | 347 | 16 | 363 | 1.81e-59 | 197 |
| MS.gene022545.t1 | MTR_1g074020 | 37.025 | 316 | 193 | 3 | 17 | 331 | 32 | 342 | 2.81e-59 | 196 |
| MS.gene022545.t1 | MTR_5g021160 | 32.659 | 346 | 222 | 3 | 1 | 338 | 10 | 352 | 1.03e-58 | 194 |
| MS.gene022545.t1 | MTR_1g030600 | 36.228 | 334 | 199 | 4 | 6 | 332 | 26 | 352 | 1.77e-58 | 194 |
| MS.gene022545.t1 | MTR_2g027030 | 34.535 | 333 | 207 | 4 | 3 | 332 | 17 | 341 | 2.91e-58 | 193 |
| MS.gene022545.t1 | MTR_7g111830 | 32.317 | 328 | 206 | 4 | 3 | 320 | 12 | 333 | 7.16e-58 | 192 |
| MS.gene022545.t1 | MTR_2g016710 | 36.027 | 297 | 185 | 2 | 1 | 297 | 11 | 302 | 1.43e-57 | 190 |
| MS.gene022545.t1 | MTR_4g106720 | 34.557 | 327 | 194 | 4 | 2 | 319 | 15 | 330 | 3.31e-57 | 190 |
| MS.gene022545.t1 | MTR_2g007970 | 34.795 | 342 | 212 | 5 | 1 | 340 | 15 | 347 | 8.20e-57 | 190 |
| MS.gene022545.t1 | MTR_3g095460 | 33.231 | 325 | 213 | 3 | 5 | 327 | 12 | 334 | 1.16e-56 | 188 |
| MS.gene022545.t1 | MTR_3g095450 | 33.828 | 337 | 198 | 5 | 1 | 323 | 8 | 333 | 1.67e-56 | 188 |
| MS.gene022545.t1 | MTR_8g092650 | 34.259 | 324 | 206 | 3 | 1 | 319 | 8 | 329 | 2.02e-55 | 185 |
| MS.gene022545.t1 | MTR_3g090550 | 33.430 | 344 | 217 | 6 | 1 | 340 | 9 | 344 | 9.59e-55 | 183 |
| MS.gene022545.t1 | MTR_3g072560 | 35.535 | 318 | 198 | 3 | 3 | 319 | 23 | 334 | 1.18e-54 | 185 |
| MS.gene022545.t1 | MTR_4g094342 | 33.333 | 315 | 206 | 2 | 3 | 314 | 18 | 331 | 1.07e-53 | 181 |
| MS.gene022545.t1 | MTR_4g094340 | 32.164 | 342 | 224 | 4 | 3 | 342 | 14 | 349 | 2.27e-53 | 180 |
| MS.gene022545.t1 | MTR_4g094340 | 32.164 | 342 | 224 | 4 | 3 | 342 | 32 | 367 | 2.94e-53 | 180 |
| MS.gene022545.t1 | MTR_4g094352 | 33.604 | 369 | 230 | 5 | 3 | 361 | 17 | 380 | 4.58e-53 | 180 |
| MS.gene022545.t1 | MTR_3g112480 | 36.232 | 276 | 142 | 5 | 107 | 364 | 1 | 260 | 9.40e-52 | 173 |
| MS.gene022545.t1 | MTR_2g007260 | 32.951 | 349 | 210 | 5 | 3 | 340 | 19 | 354 | 1.45e-51 | 177 |
| MS.gene022545.t1 | MTR_3g072500 | 33.929 | 280 | 172 | 4 | 84 | 352 | 2 | 279 | 9.47e-51 | 171 |
| MS.gene022545.t1 | MTR_0103s0090 | 34.472 | 322 | 207 | 2 | 2 | 323 | 15 | 332 | 5.55e-50 | 171 |
| MS.gene022545.t1 | MTR_4g094362 | 34.169 | 319 | 205 | 3 | 3 | 319 | 19 | 334 | 4.97e-49 | 169 |
| MS.gene022545.t1 | MTR_5g034990 | 34.551 | 301 | 190 | 3 | 23 | 323 | 39 | 332 | 5.95e-49 | 168 |
| MS.gene022545.t1 | MTR_3g095440 | 32.174 | 345 | 221 | 4 | 1 | 340 | 8 | 344 | 8.82e-49 | 168 |
| MS.gene022545.t1 | MTR_3g072520 | 33.962 | 318 | 208 | 2 | 3 | 319 | 14 | 330 | 1.21e-48 | 169 |
| MS.gene022545.t1 | MTR_4g094340 | 35.338 | 266 | 166 | 3 | 76 | 339 | 19 | 280 | 2.27e-48 | 165 |
| MS.gene022545.t1 | MTR_4g094360 | 33.939 | 330 | 208 | 4 | 3 | 329 | 19 | 341 | 2.81e-48 | 168 |
| MS.gene022545.t1 | MTR_1g030400 | 26.243 | 362 | 257 | 5 | 7 | 362 | 16 | 373 | 3.13e-47 | 164 |
| MS.gene022545.t1 | MTR_3g019050 | 31.153 | 321 | 217 | 3 | 1 | 320 | 21 | 338 | 7.42e-47 | 164 |
| MS.gene022545.t1 | MTR_5g068790 | 30.745 | 322 | 219 | 3 | 1 | 320 | 21 | 340 | 3.80e-46 | 162 |
| MS.gene022545.t1 | MTR_5g025290 | 31.642 | 335 | 208 | 7 | 1 | 319 | 14 | 343 | 1.39e-45 | 160 |
| MS.gene022545.t1 | MTR_5g025370 | 29.781 | 366 | 233 | 6 | 1 | 344 | 13 | 376 | 1.40e-45 | 160 |
| MS.gene022545.t1 | MTR_5g069040 | 29.721 | 323 | 223 | 3 | 1 | 320 | 21 | 342 | 2.52e-45 | 160 |
| MS.gene022545.t1 | MTR_5g025290 | 31.642 | 335 | 208 | 7 | 1 | 319 | 42 | 371 | 2.86e-45 | 160 |
| MS.gene022545.t1 | MTR_8g092650 | 34.802 | 227 | 142 | 2 | 98 | 319 | 26 | 251 | 2.79e-43 | 151 |
| MS.gene022545.t1 | MTR_5g089390 | 29.630 | 324 | 210 | 4 | 2 | 320 | 18 | 328 | 3.14e-43 | 153 |
| MS.gene022545.t1 | MTR_5g021160 | 30.483 | 269 | 181 | 1 | 76 | 338 | 1 | 269 | 3.42e-43 | 151 |
| MS.gene022545.t1 | MTR_5g025330 | 29.499 | 339 | 222 | 4 | 1 | 324 | 12 | 348 | 8.51e-43 | 157 |
| MS.gene022545.t1 | MTR_5g025340 | 29.459 | 370 | 235 | 7 | 1 | 348 | 13 | 378 | 2.05e-42 | 152 |
| MS.gene022545.t1 | MTR_0103s0090 | 35.537 | 242 | 153 | 1 | 82 | 323 | 3 | 241 | 3.38e-42 | 149 |
| MS.gene022545.t1 | MTR_6g007760 | 34.615 | 286 | 176 | 4 | 18 | 299 | 31 | 309 | 4.70e-42 | 149 |
| MS.gene022545.t1 | MTR_5g025400 | 29.191 | 346 | 226 | 5 | 1 | 329 | 14 | 357 | 2.26e-41 | 149 |
| MS.gene022545.t1 | MTR_5g034910 | 30.514 | 331 | 225 | 3 | 3 | 332 | 12 | 338 | 1.03e-40 | 146 |
| MS.gene022545.t1 | MTR_8g072350 | 28.916 | 332 | 219 | 5 | 2 | 319 | 13 | 341 | 2.31e-40 | 146 |
| MS.gene022545.t1 | MTR_4g094360 | 34.375 | 256 | 163 | 2 | 75 | 329 | 43 | 294 | 2.58e-40 | 145 |
| MS.gene022545.t1 | MTR_5g034980 | 29.866 | 298 | 204 | 3 | 23 | 319 | 32 | 325 | 2.61e-40 | 145 |
| MS.gene022545.t1 | MTR_4g094360 | 32.886 | 298 | 194 | 3 | 3 | 297 | 19 | 313 | 9.98e-40 | 143 |
| MS.gene022545.t1 | MTR_5g034930 | 29.874 | 318 | 218 | 3 | 3 | 319 | 11 | 324 | 3.75e-39 | 142 |
| MS.gene022545.t1 | MTR_6g007743 | 30.769 | 312 | 205 | 4 | 22 | 330 | 36 | 339 | 4.82e-39 | 142 |
| MS.gene022545.t1 | MTR_3g072500 | 32.911 | 237 | 154 | 3 | 1 | 235 | 23 | 256 | 4.37e-38 | 138 |
| MS.gene022545.t1 | MTR_5g021160 | 31.727 | 249 | 165 | 2 | 1 | 247 | 10 | 255 | 3.03e-37 | 135 |
| MS.gene022545.t1 | MTR_1g074160 | 34.959 | 246 | 154 | 4 | 3 | 247 | 18 | 258 | 9.50e-37 | 134 |
| MS.gene022545.t1 | MTR_6g007747 | 35.197 | 304 | 185 | 4 | 22 | 323 | 36 | 329 | 1.06e-36 | 136 |
| MS.gene022545.t1 | MTR_2g102340 | 36.752 | 234 | 143 | 3 | 3 | 235 | 43 | 272 | 1.97e-36 | 135 |
| MS.gene022545.t1 | MTR_1g014510 | 29.154 | 319 | 224 | 2 | 2 | 319 | 15 | 332 | 4.39e-36 | 136 |
| MS.gene022545.t1 | MTR_5g012650 | 29.217 | 332 | 220 | 6 | 2 | 326 | 12 | 335 | 3.07e-35 | 132 |
| MS.gene022545.t1 | MTR_6g007750 | 32.051 | 312 | 204 | 5 | 23 | 331 | 37 | 343 | 4.85e-34 | 129 |
| MS.gene022545.t1 | MTR_6g007740 | 29.664 | 327 | 219 | 4 | 7 | 330 | 21 | 339 | 2.16e-31 | 124 |
| MS.gene022545.t1 | MTR_6g007757 | 32.440 | 336 | 204 | 7 | 22 | 350 | 36 | 355 | 3.93e-31 | 121 |
| MS.gene022545.t1 | MTR_3g095440 | 30.677 | 251 | 167 | 3 | 1 | 246 | 8 | 256 | 1.07e-30 | 118 |
| MS.gene022545.t1 | MTR_6g007753 | 31.488 | 289 | 190 | 3 | 37 | 323 | 333 | 615 | 1.57e-30 | 123 |
| MS.gene022545.t1 | MTR_6g007753 | 30.040 | 253 | 163 | 4 | 111 | 357 | 84 | 328 | 6.43e-25 | 106 |
| MS.gene022545.t1 | MTR_5g034970 | 28.213 | 319 | 211 | 4 | 2 | 319 | 11 | 312 | 2.12e-30 | 119 |
| MS.gene022545.t1 | MTR_4g100840 | 25.073 | 343 | 237 | 6 | 2 | 333 | 18 | 351 | 1.00e-29 | 117 |
| MS.gene022545.t1 | MTR_4g094340 | 32.203 | 236 | 155 | 3 | 3 | 236 | 14 | 246 | 2.97e-28 | 111 |
| MS.gene022545.t1 | MTR_4g094340 | 32.203 | 236 | 155 | 3 | 3 | 236 | 32 | 264 | 4.27e-28 | 111 |
| MS.gene022545.t1 | MTR_1g052205 | 27.016 | 248 | 158 | 4 | 113 | 347 | 14 | 251 | 7.86e-28 | 110 |
| MS.gene022545.t1 | MTR_3g072500 | 32.487 | 197 | 128 | 3 | 1 | 195 | 23 | 216 | 1.52e-27 | 108 |
| MS.gene022545.t1 | MTR_3g072530 | 31.022 | 274 | 138 | 6 | 4 | 235 | 20 | 284 | 1.77e-27 | 110 |
| MS.gene022545.t1 | MTR_1g051120 | 31.122 | 196 | 130 | 3 | 1 | 195 | 19 | 210 | 1.74e-23 | 97.4 |
| MS.gene022545.t1 | MTR_4g094342 | 31.188 | 202 | 135 | 2 | 3 | 201 | 18 | 218 | 9.10e-23 | 96.3 |
| MS.gene022545.t1 | MTR_1g051120 | 30.769 | 195 | 130 | 3 | 1 | 194 | 19 | 209 | 1.93e-22 | 95.9 |
| MS.gene022545.t1 | MTR_4g094340 | 32.821 | 195 | 126 | 3 | 3 | 195 | 32 | 223 | 5.85e-22 | 93.6 |
| MS.gene022545.t1 | MTR_5g034980 | 28.319 | 226 | 157 | 3 | 23 | 247 | 32 | 253 | 7.11e-20 | 89.4 |
| MS.gene022545.t1 | MTR_6g007757 | 32.127 | 221 | 131 | 5 | 22 | 235 | 36 | 244 | 5.37e-19 | 86.3 |
| MS.gene022545.t1 | MTR_4g094348 | 34.400 | 125 | 71 | 2 | 79 | 194 | 2 | 124 | 4.22e-16 | 75.9 |
| MS.gene022545.t1 | MTR_1g014790 | 35.433 | 127 | 68 | 2 | 82 | 201 | 46 | 165 | 3.35e-14 | 71.2 |
| MS.gene022545.t1 | MTR_3g093450 | 27.692 | 195 | 88 | 6 | 132 | 316 | 25 | 176 | 1.69e-11 | 63.2 |
| MS.gene022545.t1 | MTR_1g068720 | 32.000 | 125 | 78 | 3 | 200 | 319 | 101 | 223 | 3.65e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022545.t1 | AT4G30420 | 50.273 | 366 | 171 | 4 | 1 | 364 | 1 | 357 | 1.11e-127 | 371 |
| MS.gene022545.t1 | AT4G30420 | 50.273 | 366 | 171 | 4 | 1 | 364 | 11 | 367 | 1.64e-127 | 371 |
| MS.gene022545.t1 | AT4G28040 | 42.896 | 366 | 190 | 5 | 1 | 364 | 10 | 358 | 1.69e-99 | 299 |
| MS.gene022545.t1 | AT4G28040 | 42.896 | 366 | 190 | 5 | 1 | 364 | 10 | 358 | 1.69e-99 | 299 |
| MS.gene022545.t1 | AT4G28040 | 42.896 | 366 | 190 | 5 | 1 | 364 | 10 | 358 | 1.69e-99 | 299 |
| MS.gene022545.t1 | AT4G28040 | 42.896 | 366 | 190 | 5 | 1 | 364 | 10 | 358 | 1.69e-99 | 299 |
| MS.gene022545.t1 | AT4G28040 | 42.896 | 366 | 190 | 5 | 1 | 364 | 10 | 358 | 1.69e-99 | 299 |
| MS.gene022545.t1 | AT1G75500 | 38.855 | 332 | 197 | 2 | 1 | 327 | 22 | 352 | 2.03e-76 | 241 |
| MS.gene022545.t1 | AT1G75500 | 38.855 | 332 | 197 | 2 | 1 | 327 | 22 | 352 | 2.03e-76 | 241 |
| MS.gene022545.t1 | AT3G18200 | 37.538 | 333 | 200 | 4 | 1 | 331 | 37 | 363 | 4.18e-75 | 237 |
| MS.gene022545.t1 | AT3G53210 | 39.432 | 317 | 190 | 2 | 1 | 317 | 12 | 326 | 1.36e-71 | 228 |
| MS.gene022545.t1 | AT4G08300 | 33.425 | 365 | 230 | 5 | 1 | 357 | 13 | 372 | 6.19e-67 | 216 |
| MS.gene022545.t1 | AT1G21890 | 36.810 | 326 | 198 | 2 | 1 | 319 | 13 | 337 | 3.76e-66 | 214 |
| MS.gene022545.t1 | AT1G09380 | 34.906 | 318 | 204 | 2 | 1 | 316 | 10 | 326 | 2.14e-62 | 204 |
| MS.gene022545.t1 | AT5G64700 | 35.294 | 357 | 208 | 7 | 1 | 347 | 10 | 353 | 5.31e-61 | 200 |
| MS.gene022545.t1 | AT2G40900 | 33.739 | 329 | 209 | 4 | 2 | 329 | 14 | 334 | 5.96e-61 | 201 |
| MS.gene022545.t1 | AT3G53210 | 41.393 | 244 | 142 | 1 | 74 | 317 | 27 | 269 | 6.21e-61 | 198 |
| MS.gene022545.t1 | AT2G37460 | 33.043 | 345 | 217 | 5 | 1 | 343 | 17 | 349 | 6.50e-61 | 201 |
| MS.gene022545.t1 | AT2G39510 | 34.375 | 320 | 206 | 3 | 1 | 319 | 10 | 326 | 1.47e-60 | 199 |
| MS.gene022545.t1 | AT5G07050 | 33.889 | 360 | 206 | 8 | 2 | 342 | 21 | 367 | 2.10e-60 | 200 |
| MS.gene022545.t1 | AT1G44800 | 32.565 | 347 | 224 | 4 | 1 | 342 | 13 | 354 | 2.48e-59 | 196 |
| MS.gene022545.t1 | AT1G43650 | 33.432 | 338 | 217 | 3 | 1 | 337 | 9 | 339 | 2.19e-58 | 193 |
| MS.gene022545.t1 | AT4G08290 | 34.551 | 356 | 222 | 4 | 3 | 351 | 17 | 368 | 4.30e-58 | 193 |
| MS.gene022545.t1 | AT5G13670 | 33.735 | 332 | 194 | 6 | 1 | 319 | 10 | 328 | 1.93e-57 | 191 |
| MS.gene022545.t1 | AT3G18200 | 39.076 | 238 | 138 | 3 | 96 | 331 | 1 | 233 | 1.15e-55 | 183 |
| MS.gene022545.t1 | AT3G56620 | 33.333 | 315 | 203 | 3 | 2 | 316 | 14 | 321 | 7.50e-55 | 184 |
| MS.gene022545.t1 | AT1G21890 | 35.197 | 304 | 189 | 2 | 1 | 297 | 13 | 315 | 2.86e-54 | 182 |
| MS.gene022545.t1 | AT1G11450 | 33.784 | 296 | 185 | 4 | 33 | 324 | 6 | 294 | 2.42e-52 | 176 |
| MS.gene022545.t1 | AT1G11450 | 33.115 | 305 | 193 | 4 | 24 | 324 | 41 | 338 | 3.81e-52 | 177 |
| MS.gene022545.t1 | AT3G30340 | 32.899 | 307 | 200 | 3 | 23 | 327 | 35 | 337 | 4.92e-52 | 177 |
| MS.gene022545.t1 | AT5G40230 | 32.386 | 352 | 230 | 4 | 2 | 350 | 24 | 370 | 1.09e-51 | 176 |
| MS.gene022545.t1 | AT1G11450 | 33.447 | 293 | 184 | 4 | 36 | 324 | 2 | 287 | 1.05e-50 | 172 |
| MS.gene022545.t1 | AT5G40240 | 32.817 | 323 | 212 | 4 | 22 | 341 | 43 | 363 | 1.12e-50 | 173 |
| MS.gene022545.t1 | AT5G40240 | 32.817 | 323 | 212 | 4 | 22 | 341 | 43 | 363 | 1.12e-50 | 173 |
| MS.gene022545.t1 | AT3G28050 | 34.463 | 354 | 214 | 7 | 2 | 351 | 15 | 354 | 1.41e-50 | 173 |
| MS.gene022545.t1 | AT5G40240 | 32.817 | 323 | 212 | 4 | 22 | 341 | 57 | 377 | 1.64e-50 | 173 |
| MS.gene022545.t1 | AT4G01440 | 32.026 | 306 | 201 | 3 | 24 | 327 | 35 | 335 | 2.99e-50 | 172 |
| MS.gene022545.t1 | AT1G11460 | 34.426 | 305 | 182 | 6 | 24 | 320 | 41 | 335 | 5.52e-50 | 171 |
| MS.gene022545.t1 | AT3G53210 | 37.398 | 246 | 152 | 2 | 1 | 246 | 12 | 255 | 7.37e-50 | 168 |
| MS.gene022545.t1 | AT1G01070 | 34.007 | 297 | 193 | 3 | 24 | 319 | 41 | 335 | 1.78e-48 | 167 |
| MS.gene022545.t1 | AT4G01430 | 30.606 | 330 | 220 | 4 | 24 | 348 | 34 | 359 | 3.65e-48 | 167 |
| MS.gene022545.t1 | AT5G47470 | 32.523 | 329 | 206 | 5 | 2 | 325 | 33 | 350 | 4.54e-48 | 166 |
| MS.gene022545.t1 | AT5G47470 | 32.523 | 329 | 206 | 5 | 2 | 325 | 61 | 378 | 5.47e-48 | 167 |
| MS.gene022545.t1 | AT5G47470 | 32.523 | 329 | 206 | 5 | 2 | 325 | 61 | 378 | 5.54e-48 | 167 |
| MS.gene022545.t1 | AT1G11450 | 33.871 | 248 | 160 | 2 | 78 | 324 | 2 | 246 | 1.91e-45 | 157 |
| MS.gene022545.t1 | AT2G37450 | 32.915 | 319 | 185 | 5 | 3 | 319 | 13 | 304 | 3.02e-45 | 158 |
| MS.gene022545.t1 | AT1G01070 | 35.294 | 255 | 163 | 2 | 67 | 320 | 36 | 289 | 4.08e-45 | 157 |
| MS.gene022545.t1 | AT4G15540 | 33.235 | 340 | 213 | 3 | 2 | 340 | 20 | 346 | 4.69e-45 | 158 |
| MS.gene022545.t1 | AT4G15540 | 33.235 | 340 | 213 | 3 | 2 | 340 | 20 | 346 | 4.69e-45 | 158 |
| MS.gene022545.t1 | AT5G45370 | 30.422 | 332 | 214 | 5 | 2 | 319 | 23 | 351 | 4.75e-44 | 156 |
| MS.gene022545.t1 | AT5G45370 | 30.422 | 332 | 214 | 5 | 2 | 319 | 23 | 351 | 4.75e-44 | 156 |
| MS.gene022545.t1 | AT4G01440 | 30.824 | 279 | 186 | 3 | 24 | 300 | 35 | 308 | 6.83e-44 | 154 |
| MS.gene022545.t1 | AT5G45370 | 30.408 | 319 | 207 | 5 | 2 | 319 | 23 | 327 | 4.31e-42 | 150 |
| MS.gene022545.t1 | AT1G11450 | 31.655 | 278 | 179 | 4 | 24 | 297 | 41 | 311 | 3.78e-41 | 147 |
| MS.gene022545.t1 | AT3G45870 | 29.721 | 323 | 216 | 3 | 1 | 314 | 14 | 334 | 8.27e-41 | 148 |
| MS.gene022545.t1 | AT1G70260 | 28.022 | 364 | 240 | 8 | 1 | 348 | 14 | 371 | 2.43e-39 | 144 |
| MS.gene022545.t1 | AT1G68170 | 30.218 | 321 | 220 | 3 | 2 | 320 | 16 | 334 | 7.63e-39 | 142 |
| MS.gene022545.t1 | AT1G68170 | 30.218 | 321 | 220 | 3 | 2 | 320 | 6 | 324 | 1.06e-38 | 141 |
| MS.gene022545.t1 | AT4G01430 | 30.526 | 285 | 195 | 3 | 24 | 306 | 34 | 317 | 1.54e-38 | 140 |
| MS.gene022545.t1 | AT4G19185 | 28.097 | 331 | 223 | 3 | 2 | 319 | 24 | 352 | 6.81e-38 | 140 |
| MS.gene022545.t1 | AT5G40210 | 30.061 | 326 | 203 | 5 | 2 | 324 | 16 | 319 | 1.93e-37 | 138 |
| MS.gene022545.t1 | AT5G64700 | 33.984 | 256 | 153 | 6 | 1 | 246 | 10 | 259 | 8.23e-37 | 134 |
| MS.gene022545.t1 | AT4G01440 | 30.736 | 231 | 154 | 2 | 99 | 327 | 1 | 227 | 6.25e-36 | 132 |
| MS.gene022545.t1 | AT4G01440 | 30.736 | 231 | 154 | 2 | 99 | 327 | 1 | 227 | 6.25e-36 | 132 |
| MS.gene022545.t1 | AT1G25270 | 29.063 | 320 | 224 | 2 | 1 | 319 | 5 | 322 | 2.66e-35 | 132 |
| MS.gene022545.t1 | AT1G60050 | 27.298 | 359 | 251 | 5 | 3 | 352 | 17 | 374 | 2.94e-35 | 133 |
| MS.gene022545.t1 | AT3G45870 | 28.571 | 308 | 209 | 3 | 1 | 299 | 14 | 319 | 1.94e-34 | 129 |
| MS.gene022545.t1 | AT1G43650 | 34.167 | 240 | 144 | 5 | 1 | 236 | 9 | 238 | 4.87e-34 | 127 |
| MS.gene022545.t1 | AT4G01430 | 30.769 | 221 | 152 | 1 | 128 | 347 | 1 | 221 | 5.63e-33 | 123 |
| MS.gene022545.t1 | AT4G01450 | 31.208 | 298 | 198 | 2 | 24 | 321 | 35 | 325 | 7.91e-33 | 126 |
| MS.gene022545.t1 | AT2G37450 | 33.047 | 233 | 149 | 3 | 89 | 319 | 5 | 232 | 1.16e-32 | 123 |
| MS.gene022545.t1 | AT4G16620 | 28.022 | 364 | 231 | 7 | 7 | 364 | 20 | 358 | 2.30e-32 | 124 |
| MS.gene022545.t1 | AT3G28130 | 29.097 | 299 | 207 | 5 | 23 | 319 | 37 | 332 | 6.32e-32 | 123 |
| MS.gene022545.t1 | AT4G08290 | 34.746 | 236 | 147 | 2 | 3 | 235 | 17 | 248 | 7.69e-32 | 121 |
| MS.gene022545.t1 | AT3G28070 | 29.779 | 272 | 176 | 7 | 84 | 352 | 9 | 268 | 1.13e-31 | 120 |
| MS.gene022545.t1 | AT4G19185 | 28.077 | 260 | 173 | 2 | 73 | 319 | 16 | 274 | 2.11e-31 | 121 |
| MS.gene022545.t1 | AT4G01450 | 29.927 | 274 | 185 | 2 | 24 | 297 | 35 | 301 | 4.16e-31 | 121 |
| MS.gene022545.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 84 | 319 | 2 | 249 | 5.50e-31 | 119 |
| MS.gene022545.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 84 | 319 | 2 | 249 | 5.50e-31 | 119 |
| MS.gene022545.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 82 | 319 | 9 | 246 | 6.26e-31 | 119 |
| MS.gene022545.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 82 | 319 | 9 | 246 | 6.26e-31 | 119 |
| MS.gene022545.t1 | AT3G28070 | 29.412 | 272 | 177 | 7 | 84 | 352 | 101 | 360 | 8.09e-31 | 120 |
| MS.gene022545.t1 | AT3G28100 | 28.308 | 325 | 222 | 5 | 23 | 346 | 38 | 352 | 1.05e-29 | 117 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 9 | 269 | 1.74e-28 | 112 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 9 | 269 | 1.74e-28 | 112 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 9 | 269 | 1.74e-28 | 112 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 9 | 269 | 1.74e-28 | 112 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 98 | 358 | 9.79e-28 | 112 |
| MS.gene022545.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 84 | 352 | 90 | 350 | 1.18e-27 | 111 |
| MS.gene022545.t1 | AT4G01440 | 29.646 | 226 | 152 | 3 | 24 | 247 | 35 | 255 | 1.42e-27 | 110 |
| MS.gene022545.t1 | AT2G37450 | 32.075 | 212 | 137 | 3 | 110 | 319 | 59 | 265 | 9.55e-27 | 108 |
| MS.gene022545.t1 | AT3G45870 | 28.516 | 256 | 172 | 3 | 1 | 247 | 14 | 267 | 4.24e-26 | 106 |
| MS.gene022545.t1 | AT5G45370 | 29.091 | 220 | 140 | 4 | 114 | 319 | 74 | 291 | 9.63e-26 | 105 |
| MS.gene022545.t1 | AT3G45870 | 29.524 | 210 | 138 | 2 | 114 | 314 | 51 | 259 | 3.04e-25 | 104 |
| MS.gene022545.t1 | AT3G30340 | 30.396 | 227 | 152 | 3 | 23 | 247 | 35 | 257 | 6.00e-25 | 102 |
| MS.gene022545.t1 | AT4G24980 | 28.378 | 296 | 137 | 7 | 24 | 316 | 12 | 235 | 1.49e-24 | 101 |
| MS.gene022545.t1 | AT3G28070 | 27.984 | 243 | 160 | 7 | 113 | 352 | 1 | 231 | 7.92e-24 | 98.6 |
| MS.gene022545.t1 | AT3G28130 | 27.273 | 209 | 148 | 4 | 113 | 319 | 1 | 207 | 3.17e-23 | 97.1 |
| MS.gene022545.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 89 | 364 | 5 | 261 | 7.47e-22 | 94.0 |
| MS.gene022545.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 89 | 364 | 5 | 261 | 7.47e-22 | 94.0 |
| MS.gene022545.t1 | AT4G01450 | 29.048 | 210 | 142 | 2 | 24 | 233 | 35 | 237 | 9.12e-22 | 94.0 |
| MS.gene022545.t1 | AT3G28070 | 29.032 | 217 | 148 | 5 | 84 | 297 | 101 | 314 | 4.02e-21 | 93.2 |
| MS.gene022545.t1 | AT4G16620 | 32.701 | 211 | 132 | 3 | 7 | 214 | 20 | 223 | 1.77e-20 | 90.5 |
| MS.gene022545.t1 | AT3G28080 | 26.556 | 241 | 167 | 4 | 113 | 352 | 1 | 232 | 2.27e-20 | 89.4 |
| MS.gene022545.t1 | AT4G01450 | 30.168 | 179 | 118 | 2 | 24 | 202 | 35 | 206 | 1.94e-19 | 87.0 |
| MS.gene022545.t1 | AT3G45870 | 31.944 | 144 | 97 | 1 | 171 | 314 | 41 | 183 | 2.37e-19 | 86.3 |
| MS.gene022545.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 114 | 297 | 51 | 242 | 3.90e-19 | 86.3 |
| MS.gene022545.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 114 | 297 | 51 | 242 | 3.90e-19 | 86.3 |
| MS.gene022545.t1 | AT3G28080 | 25.651 | 269 | 138 | 4 | 84 | 352 | 9 | 215 | 4.51e-19 | 85.1 |
| MS.gene022545.t1 | AT3G28080 | 25.651 | 269 | 138 | 4 | 84 | 352 | 98 | 304 | 1.98e-18 | 85.1 |
| MS.gene022545.t1 | AT3G28130 | 27.111 | 225 | 160 | 4 | 23 | 245 | 37 | 259 | 5.61e-13 | 68.9 |
| MS.gene022545.t1 | AT3G45870 | 27.397 | 146 | 96 | 2 | 111 | 247 | 1 | 145 | 7.93e-13 | 66.2 |
| MS.gene022545.t1 | AT3G28130 | 31.034 | 174 | 117 | 3 | 23 | 195 | 37 | 208 | 7.27e-12 | 64.7 |
| MS.gene022545.t1 | AT3G28100 | 28.972 | 214 | 151 | 1 | 2 | 215 | 17 | 229 | 7.76e-12 | 65.5 |
| MS.gene022545.t1 | AT3G28100 | 27.907 | 215 | 153 | 2 | 23 | 236 | 38 | 251 | 5.10e-11 | 63.2 |
| MS.gene022545.t1 | AT3G45870 | 27.273 | 143 | 94 | 2 | 114 | 247 | 51 | 192 | 6.52e-11 | 61.6 |
Find 66 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTGTCCCCACTATTT+TGG | 0.190725 | 8.4:+80632892 | None:intergenic |
| ATCAATTCTTTGCTTCAATT+TGG | 0.217860 | 8.4:-80632342 | MS.gene022545:CDS |
| TTATTCTTGACCTCACTAAT+TGG | 0.247020 | 8.4:-80633291 | MS.gene022545:CDS |
| AATTGATCTTCCACACATTC+AGG | 0.277827 | 8.4:+80632358 | None:intergenic |
| AGGCTTGTATACTGTACTTT+GGG | 0.280415 | 8.4:-80631908 | MS.gene022545:CDS |
| ACTGTGTTGCCTGGTCAATT+TGG | 0.328526 | 8.4:-80632718 | MS.gene022545:CDS |
| AGAGTTTATATATGCAGGTT+TGG | 0.333917 | 8.4:-80633552 | MS.gene022545:CDS |
| TCTACATTATTTAGTAGCTT+TGG | 0.345668 | 8.4:+80632830 | None:intergenic |
| ATGTAATTTGTTAGCTTGAT+TGG | 0.346431 | 8.4:-80631949 | MS.gene022545:intron |
| GTTCTTCCAAATGATGAGTT+TGG | 0.347202 | 8.4:+80631767 | None:intergenic |
| GCTGTAAATGACAAGTAATT+AGG | 0.355735 | 8.4:+80632441 | None:intergenic |
| ATATATGCAGGTTTGGGTAT+TGG | 0.362080 | 8.4:-80633545 | MS.gene022545:CDS |
| GAGTTTATATATGCAGGTTT+GGG | 0.373910 | 8.4:-80633551 | MS.gene022545:CDS |
| TTATTGCCAAACTCATCATT+TGG | 0.389599 | 8.4:-80631773 | MS.gene022545:CDS |
| TTGATAGAGTTTATATATGC+AGG | 0.392453 | 8.4:-80633557 | MS.gene022545:CDS |
| CTTGCCATGATTGACTTTGA+AGG | 0.404722 | 8.4:+80632797 | None:intergenic |
| TTTGTAATAGCAGCCTTTGT+AGG | 0.408588 | 8.4:-80633059 | MS.gene022545:CDS |
| TCATTAATAATCATCAACTT+TGG | 0.411929 | 8.4:+80631841 | None:intergenic |
| GGTGCAATTGGAGTGATCAT+AGG | 0.416497 | 8.4:-80631928 | MS.gene022545:CDS |
| AAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8.4:-80632903 | MS.gene022545:CDS |
| TATTCTTGACCTCACTAATT+GGG | 0.424692 | 8.4:-80633290 | MS.gene022545:intron |
| TTACATTTCATAGGGAATCA+TGG | 0.432571 | 8.4:-80632213 | MS.gene022545:intron |
| GTTAGCTTGATTGGTGCAAT+TGG | 0.442208 | 8.4:-80631940 | MS.gene022545:intron |
| TAGGCTTGTATACTGTACTT+TGG | 0.445695 | 8.4:-80631909 | MS.gene022545:CDS |
| TCTTTGAAATGCACCAAGCT+TGG | 0.450004 | 8.4:+80632168 | None:intergenic |
| CTAGTAGTGATAATGCGAAT+TGG | 0.462237 | 8.4:-80632769 | MS.gene022545:CDS |
| AGTATCTATTGCATTGTTGA+AGG | 0.465625 | 8.4:-80632855 | MS.gene022545:CDS |
| TTAGGATGGCTTGCATAAGC+TGG | 0.480462 | 8.4:+80632459 | None:intergenic |
| TACATTTCATAGGGAATCAT+GGG | 0.488615 | 8.4:-80632212 | MS.gene022545:intron |
| ATTATTAATGAGACAGAGGA+AGG | 0.498746 | 8.4:-80631829 | MS.gene022545:CDS |
| GCTATTACAAATGTAACTGC+TGG | 0.501198 | 8.4:+80633071 | None:intergenic |
| TTTCTTGACAGGAGAAACTC+TGG | 0.503537 | 8.4:-80633348 | MS.gene022545:intron |
| TGCTATCTTGTTGCTTCATG+AGG | 0.504097 | 8.4:-80632087 | MS.gene022545:CDS |
| GTCACAATTAATGTGAAAAG+AGG | 0.504645 | 8.4:+80632116 | None:intergenic |
| TTGTAATAGCAGCCTTTGTA+GGG | 0.505236 | 8.4:-80633058 | MS.gene022545:intron |
| GTGGACTAAGCATGTAATAG+AGG | 0.527589 | 8.4:+80631745 | None:intergenic |
| CTACCTTCCAATAATGGCTA+TGG | 0.528631 | 8.4:-80633582 | None:intergenic |
| TATACCTTCAAAGTCAATCA+TGG | 0.529801 | 8.4:-80632801 | MS.gene022545:CDS |
| AGAACTATAGCCAAAATAGT+GGG | 0.530722 | 8.4:-80632902 | MS.gene022545:CDS |
| GATAATGCGAATTGGTTGCT+TGG | 0.531604 | 8.4:-80632761 | MS.gene022545:CDS |
| CTTCATGAGGAAATATACAT+TGG | 0.532240 | 8.4:-80632074 | MS.gene022545:CDS |
| CGGTACACAACAAATACCCT+AGG | 0.540219 | 8.4:+80633491 | None:intergenic |
| ATTACTTGTCATTTACAGCA+TGG | 0.541204 | 8.4:-80632437 | MS.gene022545:CDS |
| TGTAACTGCTGGAACAAGGT+TGG | 0.541791 | 8.4:+80633082 | None:intergenic |
| TTTGCAGGGTTTGAGCCCTA+GGG | 0.543458 | 8.4:-80633507 | MS.gene022545:CDS |
| GATGATTATTAATGAGACAG+AGG | 0.548661 | 8.4:-80631833 | MS.gene022545:CDS |
| GGGACAATGATATGTATAAG+TGG | 0.560003 | 8.4:-80632881 | MS.gene022545:CDS |
| AGCAACAGGAGCAAGAAGAA+TGG | 0.560164 | 8.4:+80633454 | None:intergenic |
| GTATCTATTGCATTGTTGAA+GGG | 0.561664 | 8.4:-80632854 | MS.gene022545:CDS |
| ATGAGGAAATATACATTGGA+AGG | 0.568135 | 8.4:-80632070 | MS.gene022545:intron |
| CAAAATGAGCCAAATTGACC+AGG | 0.569290 | 8.4:+80632709 | None:intergenic |
| TAACATTCTATCTCCAAGCT+TGG | 0.571991 | 8.4:-80632181 | MS.gene022545:CDS |
| CAAATGTAACTGCTGGAACA+AGG | 0.576764 | 8.4:+80633078 | None:intergenic |
| TGCTGGAACAAGGTTGGACA+TGG | 0.579813 | 8.4:+80633088 | None:intergenic |
| TCACAATTAATGTGAAAAGA+GGG | 0.589292 | 8.4:+80632117 | None:intergenic |
| GGCTTGTATACTGTACTTTG+GGG | 0.593434 | 8.4:-80631907 | MS.gene022545:CDS |
| AGTAATTACGTACCCTACAA+AGG | 0.606201 | 8.4:+80633046 | None:intergenic |
| GCTTGGTGCATTTCAAAGAG+AGG | 0.611097 | 8.4:-80632164 | MS.gene022545:CDS |
| TAAATGACAAGTAATTAGGA+TGG | 0.617968 | 8.4:+80632445 | None:intergenic |
| TTATTAATGAGACAGAGGAA+GGG | 0.651566 | 8.4:-80631828 | MS.gene022545:CDS |
| GGAAACTAACCCAATTAGTG+AGG | 0.656012 | 8.4:+80633281 | None:intergenic |
| GAATGGTTGCAATAGCATGA+CGG | 0.671471 | 8.4:+80633471 | None:intergenic |
| TTAAACATAGCAGAGAAGAG+AGG | 0.674281 | 8.4:+80632140 | None:intergenic |
| TTGAATCAGACCTGAATGTG+TGG | 0.674327 | 8.4:-80632368 | MS.gene022545:CDS |
| GAACTATAGCCAAAATAGTG+GGG | 0.681705 | 8.4:-80632901 | MS.gene022545:CDS |
| GGTACACAACAAATACCCTA+GGG | 0.684227 | 8.4:+80633492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAAATTTATTTTTTGA+GGG | - | chr8.4:80632176-80632195 | MS.gene022545:CDS | 10.0% |
| !! | AAATGTAATTACTACTAATT+AGG | + | chr8.4:80633094-80633113 | None:intergenic | 15.0% |
| !! | AGAAAAACTCTTTAAATTTA+AGG | + | chr8.4:80632005-80632024 | None:intergenic | 15.0% |
| !! | ATATTATTATTACTAGAGAA+TGG | + | chr8.4:80632062-80632081 | None:intergenic | 15.0% |
| !!! | GAATCAAAATTTATTTTTTG+AGG | - | chr8.4:80632175-80632194 | MS.gene022545:CDS | 15.0% |
| !! | AATACTATTATACTACAGAA+TGG | - | chr8.4:80632371-80632390 | MS.gene022545:CDS | 20.0% |
| !! | AGTAGTAATTACATTTCATA+GGG | - | chr8.4:80633098-80633117 | MS.gene022545:CDS | 20.0% |
| !! | ATAAATTAATACATCATCAG+TGG | - | chr8.4:80633068-80633087 | MS.gene022545:CDS | 20.0% |
| !! | TAGTAGTAATTACATTTCAT+AGG | - | chr8.4:80633097-80633116 | MS.gene022545:CDS | 20.0% |
| !! | TCATTAATAATCATCAACTT+TGG | + | chr8.4:80633481-80633500 | None:intergenic | 20.0% |
| !!! | CGAATGTGTTTTTTAATTAT+TGG | - | chr8.4:80632337-80632356 | MS.gene022545:CDS | 20.0% |
| ! | ATCAATTCTTTGCTTCAATT+TGG | - | chr8.4:80632977-80632996 | MS.gene022545:intron | 25.0% |
| ! | CATATTTACACTACTCATTA+CGG | - | chr8.4:80632087-80632106 | MS.gene022545:CDS | 25.0% |
| ! | CTTATCTCAAATTGAATTAC+AGG | - | chr8.4:80633314-80633333 | MS.gene022545:CDS | 25.0% |
| ! | TAAATGACAAGTAATTAGGA+TGG | + | chr8.4:80632877-80632896 | None:intergenic | 25.0% |
| ! | TATATGTGTCATAATGTACT+AGG | - | chr8.4:80632674-80632693 | MS.gene022545:intron | 25.0% |
| ! | TATCATATTATACTTTCCTC+AGG | - | chr8.4:80632835-80632854 | MS.gene022545:CDS | 25.0% |
| ! | TCACAATTAATGTGAAAAGA+GGG | + | chr8.4:80633205-80633224 | None:intergenic | 25.0% |
| ! | TCTACATTATTTAGTAGCTT+TGG | + | chr8.4:80632492-80632511 | None:intergenic | 25.0% |
| ! | TTGATAGAGTTTATATATGC+AGG | - | chr8.4:80631762-80631781 | MS.gene022545:CDS | 25.0% |
| !!! | ACAAGAATTGTATTTTTGCA+GGG | - | chr8.4:80631798-80631817 | MS.gene022545:CDS | 25.0% |
| !!! | ATGTAATTTGTTAGCTTGAT+TGG | - | chr8.4:80633370-80633389 | MS.gene022545:intron | 25.0% |
| !!! | TATTTCTTTTGTTTCTTGAC+AGG | - | chr8.4:80631960-80631979 | MS.gene022545:intron | 25.0% |
| AAGAACTATAGCCAAAATAG+TGG | - | chr8.4:80632416-80632435 | MS.gene022545:CDS | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | chr8.4:80632417-80632436 | MS.gene022545:CDS | 30.0% | |
| AGAGTTTATATATGCAGGTT+TGG | - | chr8.4:80631767-80631786 | MS.gene022545:CDS | 30.0% | |
| AGTATCTATTGCATTGTTGA+AGG | - | chr8.4:80632464-80632483 | MS.gene022545:CDS | 30.0% | |
| ATAAAGCAATGAAAGAGAAG+TGG | + | chr8.4:80631920-80631939 | None:intergenic | 30.0% | |
| ATGAGGAAATATACATTGGA+AGG | - | chr8.4:80633249-80633268 | MS.gene022545:intron | 30.0% | |
| ATTATTAATGAGACAGAGGA+AGG | - | chr8.4:80633490-80633509 | MS.gene022545:CDS | 30.0% | |
| CTTCATGAGGAAATATACAT+TGG | - | chr8.4:80633245-80633264 | MS.gene022545:intron | 30.0% | |
| GAGTTTATATATGCAGGTTT+GGG | - | chr8.4:80631768-80631787 | MS.gene022545:CDS | 30.0% | |
| GATGATTATTAATGAGACAG+AGG | - | chr8.4:80633486-80633505 | MS.gene022545:CDS | 30.0% | |
| GATTTGTGTTTATCATGTCA+TGG | - | chr8.4:80632126-80632145 | MS.gene022545:CDS | 30.0% | |
| GCTGTAAATGACAAGTAATT+AGG | + | chr8.4:80632881-80632900 | None:intergenic | 30.0% | |
| GTATCTATTGCATTGTTGAA+GGG | - | chr8.4:80632465-80632484 | MS.gene022545:CDS | 30.0% | |
| GTCACAATTAATGTGAAAAG+AGG | + | chr8.4:80633206-80633225 | None:intergenic | 30.0% | |
| TACATTTCATAGGGAATCAT+GGG | - | chr8.4:80633107-80633126 | MS.gene022545:CDS | 30.0% | |
| TATACCTTCAAAGTCAATCA+TGG | - | chr8.4:80632518-80632537 | MS.gene022545:intron | 30.0% | |
| TATTCTTGACCTCACTAATT+GGG | - | chr8.4:80632029-80632048 | MS.gene022545:intron | 30.0% | |
| TTACATTTCATAGGGAATCA+TGG | - | chr8.4:80633106-80633125 | MS.gene022545:CDS | 30.0% | |
| TTATTAATGAGACAGAGGAA+GGG | - | chr8.4:80633491-80633510 | MS.gene022545:CDS | 30.0% | |
| TTATTCTTGACCTCACTAAT+TGG | - | chr8.4:80632028-80632047 | MS.gene022545:intron | 30.0% | |
| TTATTGCCAAACTCATCATT+TGG | - | chr8.4:80633546-80633565 | MS.gene022545:CDS | 30.0% | |
| ! | ATTACTTGTCATTTACAGCA+TGG | - | chr8.4:80632882-80632901 | MS.gene022545:CDS | 30.0% |
| ! | TGCATTTTATATGCAGTATG+TGG | - | chr8.4:80633001-80633020 | MS.gene022545:intron | 30.0% |
| ! | TGTCATAATGTACTAGGTTT+TGG | - | chr8.4:80632680-80632699 | MS.gene022545:intron | 30.0% |
| !! | CACAAGAATTGTATTTTTGC+AGG | - | chr8.4:80631797-80631816 | MS.gene022545:CDS | 30.0% |
| AATTGATCTTCCACACATTC+AGG | + | chr8.4:80632964-80632983 | None:intergenic | 35.0% | |
| AGGCTTGTATACTGTACTTT+GGG | - | chr8.4:80633411-80633430 | MS.gene022545:intron | 35.0% | |
| AGTAATTACGTACCCTACAA+AGG | + | chr8.4:80632276-80632295 | None:intergenic | 35.0% | |
| ATATATGCAGGTTTGGGTAT+TGG | - | chr8.4:80631774-80631793 | MS.gene022545:CDS | 35.0% | |
| GAACTATAGCCAAAATAGTG+GGG | - | chr8.4:80632418-80632437 | MS.gene022545:CDS | 35.0% | |
| GCTATTACAAATGTAACTGC+TGG | + | chr8.4:80632251-80632270 | None:intergenic | 35.0% | |
| GGGACAATGATATGTATAAG+TGG | - | chr8.4:80632438-80632457 | MS.gene022545:CDS | 35.0% | |
| GTTCTTCCAAATGATGAGTT+TGG | + | chr8.4:80633555-80633574 | None:intergenic | 35.0% | |
| TAACATTCTATCTCCAAGCT+TGG | - | chr8.4:80633138-80633157 | MS.gene022545:CDS | 35.0% | |
| TACCCTGAAAAATAAGCAAC+AGG | + | chr8.4:80631882-80631901 | None:intergenic | 35.0% | |
| TAGGCTTGTATACTGTACTT+TGG | - | chr8.4:80633410-80633429 | MS.gene022545:intron | 35.0% | |
| TTAAACATAGCAGAGAAGAG+AGG | + | chr8.4:80633182-80633201 | None:intergenic | 35.0% | |
| TTGTAATAGCAGCCTTTGTA+GGG | - | chr8.4:80632261-80632280 | MS.gene022545:intron | 35.0% | |
| TTTGTAATAGCAGCCTTTGT+AGG | - | chr8.4:80632260-80632279 | MS.gene022545:intron | 35.0% | |
| ! | CTAGTAGTGATAATGCGAAT+TGG | - | chr8.4:80632550-80632569 | MS.gene022545:intron | 35.0% |
| ! | CTTGGATGTCTTTGTCTTTT+AGG | - | chr8.4:80632576-80632595 | MS.gene022545:intron | 35.0% |
| ! | TATCATTGTCCCCACTATTT+TGG | + | chr8.4:80632430-80632449 | None:intergenic | 35.0% |
| !! | CTCCTGTTGCTTATTTTTCA+GGG | - | chr8.4:80631877-80631896 | MS.gene022545:CDS | 35.0% |
| CAAAATGAGCCAAATTGACC+AGG | + | chr8.4:80632613-80632632 | None:intergenic | 40.0% | |
| CAAATGTAACTGCTGGAACA+AGG | + | chr8.4:80632244-80632263 | None:intergenic | 40.0% | |
| GAATGGTTGCAATAGCATGA+CGG | + | chr8.4:80631851-80631870 | None:intergenic | 40.0% | |
| GATAATGCGAATTGGTTGCT+TGG | - | chr8.4:80632558-80632577 | MS.gene022545:intron | 40.0% | |
| GGAAACTAACCCAATTAGTG+AGG | + | chr8.4:80632041-80632060 | None:intergenic | 40.0% | |
| GGCTTGTATACTGTACTTTG+GGG | - | chr8.4:80633412-80633431 | MS.gene022545:intron | 40.0% | |
| GGTACACAACAAATACCCTA+GGG | + | chr8.4:80631830-80631849 | None:intergenic | 40.0% | |
| TTGAATCAGACCTGAATGTG+TGG | - | chr8.4:80632951-80632970 | MS.gene022545:intron | 40.0% | |
| TTTCTTGACAGGAGAAACTC+TGG | - | chr8.4:80631971-80631990 | MS.gene022545:intron | 40.0% | |
| ! | CTTGCCATGATTGACTTTGA+AGG | + | chr8.4:80632525-80632544 | None:intergenic | 40.0% |
| ! | GTTAGCTTGATTGGTGCAAT+TGG | - | chr8.4:80633379-80633398 | MS.gene022545:intron | 40.0% |
| ! | TGCTATCTTGTTGCTTCATG+AGG | - | chr8.4:80633232-80633251 | MS.gene022545:intron | 40.0% |
| !! | GCTCCTGTTGCTTATTTTTC+AGG | - | chr8.4:80631876-80631895 | MS.gene022545:CDS | 40.0% |
| !! | GTCAATTTGGCTCATTTTGC+AGG | - | chr8.4:80632614-80632633 | MS.gene022545:intron | 40.0% |
| !! | TCTTTGAAATGCACCAAGCT+TGG | + | chr8.4:80633154-80633173 | None:intergenic | 40.0% |
| !! | TTTTAGGAAACTGTGTTGCC+TGG | - | chr8.4:80632592-80632611 | MS.gene022545:intron | 40.0% |
| ACTGTGTTGCCTGGTCAATT+TGG | - | chr8.4:80632601-80632620 | MS.gene022545:intron | 45.0% | |
| AGCAACAGGAGCAAGAAGAA+TGG | + | chr8.4:80631868-80631887 | None:intergenic | 45.0% | |
| CGGTACACAACAAATACCCT+AGG | + | chr8.4:80631831-80631850 | None:intergenic | 45.0% | |
| GGTGCAATTGGAGTGATCAT+AGG | - | chr8.4:80633391-80633410 | MS.gene022545:intron | 45.0% | |
| TGTAACTGCTGGAACAAGGT+TGG | + | chr8.4:80632240-80632259 | None:intergenic | 45.0% | |
| ! | TTAGGATGGCTTGCATAAGC+TGG | + | chr8.4:80632863-80632882 | None:intergenic | 45.0% |
| !! | GCTTGGTGCATTTCAAAGAG+AGG | - | chr8.4:80633155-80633174 | MS.gene022545:CDS | 45.0% |
| CTTGCATAAGCTGGAACCTG+AGG | + | chr8.4:80632854-80632873 | None:intergenic | 50.0% | |
| TGCTGGAACAAGGTTGGACA+TGG | + | chr8.4:80632234-80632253 | None:intergenic | 50.0% | |
| TTTGCAGGGTTTGAGCCCTA+GGG | - | chr8.4:80631812-80631831 | MS.gene022545:CDS | 50.0% | |
| ! | TTTTGCAGGGTTTGAGCCCT+AGG | - | chr8.4:80631811-80631830 | MS.gene022545:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 80631750 | 80633591 | 80631750 | ID=MS.gene022545 |
| chr8.4 | mRNA | 80631750 | 80633591 | 80631750 | ID=MS.gene022545.t1;Parent=MS.gene022545 |
| chr8.4 | exon | 80633443 | 80633591 | 80633443 | ID=MS.gene022545.t1.exon1;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80633443 | 80633591 | 80633443 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80633291 | 80633359 | 80633291 | ID=MS.gene022545.t1.exon2;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80633291 | 80633359 | 80633291 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80633059 | 80633175 | 80633059 | ID=MS.gene022545.t1.exon3;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80633059 | 80633175 | 80633059 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80632706 | 80632952 | 80632706 | ID=MS.gene022545.t1.exon4;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80632706 | 80632952 | 80632706 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80632326 | 80632484 | 80632326 | ID=MS.gene022545.t1.exon5;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80632326 | 80632484 | 80632326 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80632071 | 80632222 | 80632071 | ID=MS.gene022545.t1.exon6;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80632071 | 80632222 | 80632071 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| chr8.4 | exon | 80631750 | 80631957 | 80631750 | ID=MS.gene022545.t1.exon7;Parent=MS.gene022545.t1 |
| chr8.4 | CDS | 80631750 | 80631957 | 80631750 | ID=cds.MS.gene022545.t1;Parent=MS.gene022545.t1 |
| Gene Sequence |
| Protein sequence |
