Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022694.t1 | XP_003626825.1 | 99.2 | 604 | 5 | 0 | 1 | 604 | 1 | 604 | 0.00E+00 | 1192.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022694.t1 | P37221 | 84.9 | 602 | 89 | 2 | 1 | 602 | 1 | 600 | 1.7e-297 | 1022.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022694.t1 | G7LDG5 | 99.2 | 604 | 5 | 0 | 1 | 604 | 1 | 604 | 0.0e+00 | 1192.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52200 | MS.gene022694 | PPI |
| MS.gene27682 | MS.gene022694 | PPI |
| MS.gene055730 | MS.gene022694 | PPI |
| MS.gene055731 | MS.gene022694 | PPI |
| MS.gene27681 | MS.gene022694 | PPI |
| MS.gene36359 | MS.gene022694 | PPI |
| MS.gene58341 | MS.gene022694 | PPI |
| MS.gene40704 | MS.gene022694 | PPI |
| MS.gene27680 | MS.gene022694 | PPI |
| MS.gene05873 | MS.gene022694 | PPI |
| MS.gene055729 | MS.gene022694 | PPI |
| MS.gene014608 | MS.gene022694 | PPI |
| MS.gene072226 | MS.gene022694 | PPI |
| MS.gene011059 | MS.gene022694 | PPI |
| MS.gene36748 | MS.gene022694 | PPI |
| MS.gene023832 | MS.gene022694 | PPI |
| MS.gene015800 | MS.gene022694 | PPI |
| MS.gene40254 | MS.gene022694 | PPI |
| MS.gene72021 | MS.gene022694 | PPI |
| MS.gene019525 | MS.gene022694 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022694.t1 | MTR_8g009500 | 99.172 | 604 | 5 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1234 |
| MS.gene022694.t1 | MTR_8g009500 | 99.608 | 510 | 2 | 0 | 95 | 604 | 1 | 510 | 0.0 | 1038 |
| MS.gene022694.t1 | MTR_8g009500 | 99.006 | 503 | 5 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1030 |
| MS.gene022694.t1 | MTR_8g032040 | 66.047 | 592 | 193 | 4 | 30 | 620 | 13 | 597 | 0.0 | 814 |
| MS.gene022694.t1 | MTR_7g076650 | 66.607 | 560 | 182 | 2 | 44 | 603 | 23 | 577 | 0.0 | 792 |
| MS.gene022694.t1 | MTR_7g076650 | 62.542 | 598 | 181 | 3 | 44 | 603 | 23 | 615 | 0.0 | 776 |
| MS.gene022694.t1 | MTR_7g076650 | 68.164 | 512 | 157 | 3 | 33 | 544 | 13 | 518 | 0.0 | 734 |
| MS.gene022694.t1 | MTR_8g014390 | 41.197 | 568 | 286 | 11 | 28 | 588 | 36 | 562 | 2.82e-141 | 423 |
| MS.gene022694.t1 | MTR_3g110330 | 43.017 | 537 | 278 | 9 | 54 | 588 | 42 | 552 | 2.73e-140 | 421 |
| MS.gene022694.t1 | MTR_8g102620 | 43.203 | 537 | 277 | 8 | 54 | 588 | 55 | 565 | 1.05e-139 | 419 |
| MS.gene022694.t1 | MTR_2g101040 | 41.725 | 568 | 283 | 11 | 28 | 588 | 123 | 649 | 3.63e-139 | 421 |
| MS.gene022694.t1 | MTR_2g101040 | 41.725 | 568 | 283 | 11 | 28 | 588 | 89 | 615 | 3.99e-139 | 421 |
| MS.gene022694.t1 | MTR_2g101040 | 41.667 | 564 | 281 | 11 | 28 | 584 | 89 | 611 | 1.74e-138 | 418 |
| MS.gene022694.t1 | MTR_2g101040 | 40.101 | 596 | 281 | 13 | 28 | 588 | 89 | 643 | 9.33e-135 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022694.t1 | AT2G13560 | 86.301 | 584 | 76 | 1 | 19 | 602 | 18 | 597 | 0.0 | 1045 |
| MS.gene022694.t1 | AT4G00570 | 64.818 | 577 | 195 | 2 | 44 | 620 | 32 | 600 | 0.0 | 782 |
| MS.gene022694.t1 | AT5G25880 | 42.831 | 537 | 279 | 9 | 54 | 588 | 52 | 562 | 1.09e-143 | 430 |
| MS.gene022694.t1 | AT5G25880 | 43.074 | 527 | 272 | 9 | 54 | 578 | 52 | 552 | 1.69e-143 | 428 |
| MS.gene022694.t1 | AT2G19900 | 43.575 | 537 | 275 | 8 | 54 | 588 | 45 | 555 | 7.82e-142 | 425 |
| MS.gene022694.t1 | AT1G79750 | 43.575 | 537 | 275 | 9 | 54 | 588 | 110 | 620 | 1.07e-141 | 426 |
| MS.gene022694.t1 | AT5G11670 | 41.906 | 556 | 293 | 9 | 54 | 607 | 52 | 579 | 9.05e-137 | 412 |
| MS.gene022694.t1 | AT2G19900 | 44.894 | 470 | 241 | 7 | 121 | 588 | 3 | 456 | 1.98e-128 | 387 |
| MS.gene022694.t1 | AT5G25880 | 42.593 | 432 | 221 | 8 | 54 | 483 | 52 | 458 | 1.91e-116 | 357 |
Find 143 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGAAGCATTCTCCATTT+TGG | 0.169548 | 8.4:+78565499 | MS.gene022694:CDS |
| TGCTGTTATAGATGAGTTTA+TGG | 0.175785 | 8.4:+78562376 | MS.gene022694:CDS |
| TTTGCAGGAAATGGTAATAT+TGG | 0.231427 | 8.4:+78566846 | MS.gene022694:intron |
| GTTGCAATTGCTGGACTTCT+AGG | 0.233797 | 8.4:+78563010 | MS.gene022694:CDS |
| TACAGATGGGAGCAGAATTC+TGG | 0.237038 | 8.4:+78560914 | MS.gene022694:CDS |
| TGCAAGGAATTTGAAAGAAA+TGG | 0.244826 | 8.4:+78564012 | MS.gene022694:CDS |
| CAAGGAATTGGCATTACTAT+TGG | 0.271734 | 8.4:+78560957 | MS.gene022694:CDS |
| TATAATGTTGTCGCCCAAAA+TGG | 0.295757 | 8.4:-78565513 | None:intergenic |
| CGTATCCGACGGCATGTTAC+AGG | 0.306207 | 8.4:+78567044 | MS.gene022694:CDS |
| TGGATTTGACATGGCAAATA+TGG | 0.313389 | 8.4:-78565355 | None:intergenic |
| CGCCACTTGGCCAGTGCATT+AGG | 0.321819 | 8.4:-78558992 | None:intergenic |
| ACAGCTGGTGTTGCAATTGC+TGG | 0.329137 | 8.4:+78563001 | MS.gene022694:CDS |
| GATCTTGGAGTTCAAGGAAT+TGG | 0.345793 | 8.4:+78560945 | MS.gene022694:CDS |
| AGAGTGCAAAGAGTCAATTT+TGG | 0.357216 | 8.4:+78563566 | MS.gene022694:CDS |
| AAGGAATTGGCATTACTATT+GGG | 0.364280 | 8.4:+78560958 | MS.gene022694:CDS |
| CTTGCAAAAGGAAGGGCATC+TGG | 0.369192 | 8.4:-78563995 | None:intergenic |
| ATTCTGGGACTTGGAGATCT+TGG | 0.371211 | 8.4:+78560930 | MS.gene022694:CDS |
| AGCAAACCTACCCTGGAAAT+AGG | 0.377370 | 8.4:-78566896 | None:intergenic |
| CCGTTTAGTAATGTTGATCT+AGG | 0.379780 | 8.4:+78565551 | MS.gene022694:CDS |
| AATACCTGTACAATCACATT+TGG | 0.382169 | 8.4:-78562419 | None:intergenic |
| ATTTATTTCAGCATTGGTCT+TGG | 0.388679 | 8.4:+78566997 | MS.gene022694:intron |
| GAGTAGCCACATACTCTTTG+AGG | 0.390132 | 8.4:-78561017 | None:intergenic |
| TTGCAGCAGCATCGCCTTGA+TGG | 0.391714 | 8.4:+78562341 | MS.gene022694:CDS |
| AACAACATGTACCTATTTCC+AGG | 0.393408 | 8.4:+78566885 | MS.gene022694:CDS |
| CTATAACTGGCCAGCTGAGC+AGG | 0.395936 | 8.4:+78560138 | MS.gene022694:CDS |
| TGATGTCCATGGTCTATAAC+TGG | 0.411552 | 8.4:+78560125 | MS.gene022694:CDS |
| CTTGGAGATCTTGGAGTTCA+AGG | 0.414396 | 8.4:+78560939 | MS.gene022694:CDS |
| TCGACATTCTTCATGATCCT+TGG | 0.414537 | 8.4:+78556588 | MS.gene022694:CDS |
| GCAACAACTATCTTCTGCTT+GGG | 0.418709 | 8.4:-78563070 | None:intergenic |
| TTATTTATACCATTCTTTGT+TGG | 0.419412 | 8.4:-78565375 | None:intergenic |
| GATCTATATGTTGCTGCTGC+TGG | 0.424864 | 8.4:+78560987 | MS.gene022694:CDS |
| CATTTCTACCTTGATATTGA+AGG | 0.432306 | 8.4:-78567715 | None:intergenic |
| TTGCTCCTTCCCTTAGTCCT+TGG | 0.432962 | 8.4:-78564039 | None:intergenic |
| TTATAGTGGTTGATCTGAAA+AGG | 0.434365 | 8.4:+78558936 | MS.gene022694:intron |
| AAAATGGAGAATGCTTCGTC+AGG | 0.436830 | 8.4:-78565497 | None:intergenic |
| AAATGGATCGCCAAGGACTA+AGG | 0.437660 | 8.4:+78564029 | MS.gene022694:CDS |
| TGTTGACGTTGAACCCTTGA+GGG | 0.438778 | 8.4:-78565325 | None:intergenic |
| AAGATAGTTGTTGCTGGTGC+TGG | 0.439089 | 8.4:+78563079 | MS.gene022694:CDS |
| GATTTAAAGACCTGCTCAGC+TGG | 0.439436 | 8.4:-78560148 | None:intergenic |
| TGCTTGGGGAAGTCAATCAT+TGG | 0.442318 | 8.4:-78563055 | None:intergenic |
| TTCCTGTGATGATTGACGTT+GGG | 0.445155 | 8.4:+78561595 | MS.gene022694:CDS |
| CTCCTAGGACTATCTGCTGT+TGG | 0.448226 | 8.4:+78564959 | MS.gene022694:CDS |
| GATAGTCCTAGGAGGACATC+AGG | 0.454256 | 8.4:-78564950 | None:intergenic |
| CTAGGTATTGGAGGCCCTCA+AGG | 0.455957 | 8.4:+78565311 | MS.gene022694:intron |
| GGGAGCAGAATTCTGGGACT+TGG | 0.457800 | 8.4:+78560921 | MS.gene022694:CDS |
| ACAGATGGGAGCAGAATTCT+GGG | 0.459014 | 8.4:+78560915 | MS.gene022694:CDS |
| ACTGTTGGAGTATATACTAT+TGG | 0.467180 | 8.4:-78560022 | None:intergenic |
| AAACGCTCAATCTGCACGTC+AGG | 0.469649 | 8.4:-78558595 | None:intergenic |
| ATAGGTACATGTTGTTTCCC+TGG | 0.472498 | 8.4:-78566878 | None:intergenic |
| TCTTTCAAATTCCTTGCAAA+AGG | 0.472671 | 8.4:-78564007 | None:intergenic |
| TGCAGCAGCATCGCCTTGAT+GGG | 0.473784 | 8.4:+78562342 | MS.gene022694:CDS |
| TACTACTGCAGTGCTGGAAT+CGG | 0.477528 | 8.4:+78563481 | MS.gene022694:intron |
| TCAAATTCCTTGCAAAAGGA+AGG | 0.481202 | 8.4:-78564003 | None:intergenic |
| CCTAGATCAACATTACTAAA+CGG | 0.484530 | 8.4:-78565551 | None:intergenic |
| TCCTATTATCTAGGTATTGG+AGG | 0.484762 | 8.4:+78565302 | MS.gene022694:intron |
| CTTGTATGTCAGAACTATAG+TGG | 0.485090 | 8.4:+78560049 | MS.gene022694:CDS |
| ATGTCAAATCCAACAAAGAA+TGG | 0.485534 | 8.4:+78565366 | MS.gene022694:CDS |
| TCTCTACCCCAGGGGACAGC+TGG | 0.486859 | 8.4:+78562986 | MS.gene022694:intron |
| AGCAACAACTATCTTCTGCT+TGG | 0.489107 | 8.4:-78563071 | None:intergenic |
| TGCAGAAGGATATCATGAAA+TGG | 0.489300 | 8.4:+78567882 | MS.gene022694:CDS |
| TCGGTTTAGTATTCGCCACT+TGG | 0.489619 | 8.4:-78559005 | None:intergenic |
| CTAGGACTATCTGCTGTTGG+AGG | 0.492913 | 8.4:+78564962 | MS.gene022694:CDS |
| GTCCTACTATCGTTCATAAA+CGG | 0.494086 | 8.4:+78556561 | MS.gene022694:CDS |
| GCACATCATCATTAAACATT+CGG | 0.495254 | 8.4:-78562604 | None:intergenic |
| TGGAAGCTGTCTTTACTCGC+TGG | 0.495700 | 8.4:+78562396 | MS.gene022694:CDS |
| AATATTGGACACTGCAACCA+GGG | 0.501417 | 8.4:+78566861 | MS.gene022694:CDS |
| AGAGCTTCGCAAACTAAGTC+GGG | 0.501871 | 8.4:+78567912 | MS.gene022694:CDS |
| AAGCAGAAGATAGTTGTTGC+TGG | 0.502605 | 8.4:+78563073 | MS.gene022694:CDS |
| GAGAGCTTCGCAAACTAAGT+CGG | 0.504714 | 8.4:+78567911 | MS.gene022694:CDS |
| AATCACCGCCGGTGAGGACG+TGG | 0.518417 | 8.4:-78556496 | None:intergenic |
| CTAGGTGCTGTAAGAGCTCA+AGG | 0.520317 | 8.4:+78563028 | MS.gene022694:CDS |
| CTGGCCAAATGTGATTGTAC+AGG | 0.520962 | 8.4:+78562415 | MS.gene022694:CDS |
| CAAATTCCTTGCAAAAGGAA+GGG | 0.521173 | 8.4:-78564002 | None:intergenic |
| GTGAAGAAGAGGTTCTCAAA+GGG | 0.522056 | 8.4:+78567683 | MS.gene022694:CDS |
| ACGTCAGGAGACACAACATT+TGG | 0.524491 | 8.4:-78558580 | None:intergenic |
| ATTTCTACCTTGATATTGAA+GGG | 0.526871 | 8.4:-78567714 | None:intergenic |
| TTGTTGACGTTGAACCCTTG+AGG | 0.529789 | 8.4:-78565326 | None:intergenic |
| CTCAAACGCCACGTCCTCAC+CGG | 0.530207 | 8.4:+78556488 | MS.gene022694:CDS |
| CTCCAACAGCAGATAGTCCT+AGG | 0.532338 | 8.4:-78564961 | None:intergenic |
| TCTCATTTCTGTCATGCAGT+CGG | 0.533663 | 8.4:-78559024 | None:intergenic |
| GATATGATTGTAGTTACAGA+TGG | 0.537955 | 8.4:+78560900 | MS.gene022694:CDS |
| AAAACAATGGCAAGGATGCT+GGG | 0.541419 | 8.4:+78563523 | MS.gene022694:CDS |
| GCACTGAAATACATTCCTCT+TGG | 0.543451 | 8.4:-78560085 | None:intergenic |
| CTCCGTTTATGAACGATAGT+AGG | 0.544773 | 8.4:-78556563 | None:intergenic |
| TCAGGAGACACAACATTTGG+AGG | 0.547588 | 8.4:-78558577 | None:intergenic |
| ACCTTCTGATCCTAATGCAC+TGG | 0.547636 | 8.4:+78558982 | MS.gene022694:CDS |
| CAAGATAGTCATCCCCATCA+AGG | 0.552456 | 8.4:-78562355 | None:intergenic |
| GAGACGATCTCGTTCTGTCA+TGG | 0.554372 | 8.4:-78558536 | None:intergenic |
| AATGTTTAATGATGATGTGC+AGG | 0.562033 | 8.4:+78562607 | MS.gene022694:CDS |
| CGTTTGAGTCGTTGAAGTAA+CGG | 0.562516 | 8.4:-78556473 | None:intergenic |
| TATAGAAGAAGCTGTGGAGG+AGG | 0.562863 | 8.4:+78567855 | MS.gene022694:CDS |
| GTGAAGCCTGATGTCCTCCT+AGG | 0.564961 | 8.4:+78564944 | MS.gene022694:CDS |
| AGGAGCAAGTCTCGCAGAAG+TGG | 0.572831 | 8.4:+78564054 | MS.gene022694:CDS |
| AATGGATCGCCAAGGACTAA+GGG | 0.573558 | 8.4:+78564030 | MS.gene022694:CDS |
| ATAGTATATACTCCAACAGT+AGG | 0.579352 | 8.4:+78560025 | MS.gene022694:CDS |
| CGATCTTTCACTACGATGGA+AGG | 0.580755 | 8.4:+78556533 | MS.gene022694:CDS |
| TGCATATATGAGTGAAGAAG+AGG | 0.581793 | 8.4:+78567672 | MS.gene022694:CDS |
| GCCAGTGCATTAGGATCAGA+AGG | 0.582116 | 8.4:-78558983 | None:intergenic |
| GTCCCAACGTCAATCATCAC+AGG | 0.582608 | 8.4:-78561597 | None:intergenic |
| CTTGAAGTTCAAGCAAGAGA+TGG | 0.582823 | 8.4:+78558959 | MS.gene022694:CDS |
| TGTTATAGAAGAAGCTGTGG+AGG | 0.584699 | 8.4:+78567852 | MS.gene022694:CDS |
| AAATGGAGAATGCTTCGTCA+GGG | 0.585250 | 8.4:-78565496 | None:intergenic |
| TAGGTATTGGAGGCCCTCAA+GGG | 0.585919 | 8.4:+78565312 | MS.gene022694:intron |
| TTGTATGTCAGAACTATAGT+GGG | 0.587455 | 8.4:+78560050 | MS.gene022694:CDS |
| AGTGAAGAAGAGGTTCTCAA+AGG | 0.587972 | 8.4:+78567682 | MS.gene022694:CDS |
| TTTGACATGGCAAATATGGC+TGG | 0.591614 | 8.4:-78565351 | None:intergenic |
| TAATATTGGACACTGCAACC+AGG | 0.593488 | 8.4:+78566860 | MS.gene022694:CDS |
| TGACATACAAGACCTACTGT+TGG | 0.598875 | 8.4:-78560037 | None:intergenic |
| GACAACATTATATTTGCTAG+TGG | 0.603217 | 8.4:+78565524 | MS.gene022694:CDS |
| TCGTGGAGAAATGATGTCCA+TGG | 0.612816 | 8.4:+78560114 | MS.gene022694:CDS |
| ATTCTTTGTTGGATTTGACA+TGG | 0.615831 | 8.4:-78565364 | None:intergenic |
| AGCTGGCCAGTTATAGACCA+TGG | 0.616327 | 8.4:-78560131 | None:intergenic |
| CTTCCTGTGATGATTGACGT+TGG | 0.616370 | 8.4:+78561594 | MS.gene022694:CDS |
| GTGCTGTAAGAGCTCAAGGA+AGG | 0.620608 | 8.4:+78563032 | MS.gene022694:CDS |
| TATTTCAGTGCTGAGGATCG+TGG | 0.621203 | 8.4:+78560097 | MS.gene022694:CDS |
| ATGCAGGGATTAATCACAGA+AGG | 0.622254 | 8.4:+78563956 | MS.gene022694:intron |
| AGCAGCCTGTAACATGCCGT+CGG | 0.623262 | 8.4:-78567049 | None:intergenic |
| TGGAGGATTGTTCTCAAGCG+AGG | 0.623454 | 8.4:+78564979 | MS.gene022694:CDS |
| GTGGAGGAGGATCTTGCAGA+AGG | 0.623681 | 8.4:+78567868 | MS.gene022694:CDS |
| GGCTCTAGGATCGTATCCGA+CGG | 0.624020 | 8.4:+78567033 | MS.gene022694:CDS |
| ATCCTAATGCACTGGCCAAG+TGG | 0.624552 | 8.4:+78558990 | MS.gene022694:CDS |
| ACAACATGTACCTATTTCCA+GGG | 0.625477 | 8.4:+78566886 | MS.gene022694:CDS |
| GTCGCGATCTTTCACTACGA+TGG | 0.627814 | 8.4:+78556529 | MS.gene022694:CDS |
| CAGAATTCGAGATATTACAA+AGG | 0.629110 | 8.4:+78567816 | MS.gene022694:intron |
| CAACAACTATCTTCTGCTTG+GGG | 0.630847 | 8.4:-78563069 | None:intergenic |
| TTACGCACTTTATTGAACCA+AGG | 0.636960 | 8.4:-78556605 | None:intergenic |
| ATATGATTGTAGTTACAGAT+GGG | 0.637411 | 8.4:+78560901 | MS.gene022694:CDS |
| AGGAATGTATTTCAGTGCTG+AGG | 0.642678 | 8.4:+78560090 | MS.gene022694:CDS |
| TGAAGTAATCACCGCCGGTG+AGG | 0.643325 | 8.4:-78556502 | None:intergenic |
| TTGAAAGAAATGGATCGCCA+AGG | 0.643697 | 8.4:+78564022 | MS.gene022694:CDS |
| ATCATCATTAAACATTCGGT+AGG | 0.645608 | 8.4:-78562600 | None:intergenic |
| GCAGCAGCATCGCCTTGATG+GGG | 0.650636 | 8.4:+78562343 | MS.gene022694:CDS |
| GATCGCCAAGGACTAAGGGA+AGG | 0.655509 | 8.4:+78564034 | MS.gene022694:CDS |
| TGTTACAGGCTGCTGCTGAG+CGG | 0.655909 | 8.4:+78567058 | MS.gene022694:CDS |
| CAGTATGAAGTAATCACCGC+CGG | 0.658289 | 8.4:-78556507 | None:intergenic |
| AAACGCCACGTCCTCACCGG+CGG | 0.658879 | 8.4:+78556491 | MS.gene022694:CDS |
| TAGTTGTTGCTGGTGCTGGA+AGG | 0.660614 | 8.4:+78563083 | MS.gene022694:CDS |
| AATGGAGAATGCTTCGTCAG+GGG | 0.673016 | 8.4:-78565495 | None:intergenic |
| AGCTGTTATAGAAGAAGCTG+TGG | 0.673871 | 8.4:+78567849 | MS.gene022694:CDS |
| GGGCTGTTCAGAAGACCAAG+AGG | 0.697115 | 8.4:+78560070 | MS.gene022694:CDS |
| CAACAGCAGATAGTCCTAGG+AGG | 0.697965 | 8.4:-78564958 | None:intergenic |
| GAGACGATGATGATCTCGCG+CGG | 0.721970 | 8.4:-78556451 | None:intergenic |
| CGAGATCGTCTCGATCTACG+AGG | 0.743043 | 8.4:+78558547 | MS.gene022694:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 78556434 | 78567993 | 78556434 | ID=MS.gene022694 |
| chr8.4 | mRNA | 78556434 | 78567993 | 78556434 | ID=MS.gene022694.t1;Parent=MS.gene022694 |
| chr8.4 | exon | 78556434 | 78556619 | 78556434 | ID=MS.gene022694.t1.exon1;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78556434 | 78556619 | 78556434 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78558523 | 78558619 | 78558523 | ID=MS.gene022694.t1.exon2;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78558523 | 78558619 | 78558523 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78558942 | 78559060 | 78558942 | ID=MS.gene022694.t1.exon3;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78558942 | 78559060 | 78558942 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78559992 | 78560159 | 78559992 | ID=MS.gene022694.t1.exon4;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78559992 | 78560159 | 78559992 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78560897 | 78561025 | 78560897 | ID=MS.gene022694.t1.exon5;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78560897 | 78561025 | 78560897 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78561591 | 78561651 | 78561591 | ID=MS.gene022694.t1.exon6;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78561591 | 78561651 | 78561591 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78562333 | 78562436 | 78562333 | ID=MS.gene022694.t1.exon7;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78562333 | 78562436 | 78562333 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78562545 | 78562628 | 78562545 | ID=MS.gene022694.t1.exon8;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78562545 | 78562628 | 78562545 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78562998 | 78563104 | 78562998 | ID=MS.gene022694.t1.exon9;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78562998 | 78563104 | 78562998 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78563492 | 78563603 | 78563492 | ID=MS.gene022694.t1.exon10;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78563492 | 78563603 | 78563492 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78563962 | 78564075 | 78563962 | ID=MS.gene022694.t1.exon11;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78563962 | 78564075 | 78563962 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78564935 | 78565000 | 78564935 | ID=MS.gene022694.t1.exon12;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78564935 | 78565000 | 78564935 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78565315 | 78565387 | 78565315 | ID=MS.gene022694.t1.exon13;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78565315 | 78565387 | 78565315 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78565486 | 78565572 | 78565486 | ID=MS.gene022694.t1.exon14;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78565486 | 78565572 | 78565486 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78566853 | 78566907 | 78566853 | ID=MS.gene022694.t1.exon15;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78566853 | 78566907 | 78566853 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78567008 | 78567079 | 78567008 | ID=MS.gene022694.t1.exon16;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78567008 | 78567079 | 78567008 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78567666 | 78567728 | 78567666 | ID=MS.gene022694.t1.exon17;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78567666 | 78567728 | 78567666 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| chr8.4 | exon | 78567819 | 78567993 | 78567819 | ID=MS.gene022694.t1.exon18;Parent=MS.gene022694.t1 |
| chr8.4 | CDS | 78567819 | 78567993 | 78567819 | ID=cds.MS.gene022694.t1;Parent=MS.gene022694.t1 |
| Gene Sequence |
| Protein sequence |
