Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022824.t1 | XP_013444087.1 | 100 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 4.00E-112 | 414.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022824.t1 | P49199 | 87.2 | 219 | 24 | 1 | 1 | 215 | 1 | 219 | 1.0e-100 | 367.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022824.t1 | I3T3T7 | 100.0 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 2.9e-112 | 414.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049306 | MS.gene022824 | PPI |
| MS.gene022824 | MS.gene06433 | PPI |
| MS.gene013335 | MS.gene022824 | PPI |
| MS.gene30990 | MS.gene022824 | PPI |
| MS.gene23040 | MS.gene022824 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022824.t1 | MTR_8g012325 | 100.000 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 5.57e-159 | 438 |
| MS.gene022824.t1 | MTR_7g053450 | 91.705 | 217 | 16 | 1 | 1 | 215 | 1 | 217 | 1.17e-126 | 356 |
| MS.gene022824.t1 | MTR_8g012330 | 85.116 | 215 | 30 | 1 | 3 | 215 | 74 | 288 | 2.75e-123 | 350 |
| MS.gene022824.t1 | MTR_4g016670 | 86.528 | 193 | 23 | 2 | 26 | 215 | 26 | 218 | 3.85e-117 | 332 |
| MS.gene022824.t1 | MTR_4g016663 | 73.494 | 83 | 21 | 1 | 134 | 215 | 5 | 87 | 7.61e-36 | 121 |
| MS.gene022824.t1 | MTR_4g016620 | 72.414 | 58 | 15 | 1 | 135 | 191 | 21 | 78 | 6.33e-21 | 84.0 |
| MS.gene022824.t1 | MTR_4g016610 | 58.242 | 91 | 12 | 2 | 125 | 215 | 1045 | 1109 | 4.45e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022824.t1 | AT5G59240 | 85.714 | 203 | 22 | 1 | 1 | 203 | 1 | 196 | 1.62e-126 | 356 |
| MS.gene022824.t1 | AT5G20290 | 80.476 | 210 | 34 | 1 | 1 | 203 | 1 | 210 | 1.00e-108 | 311 |
Find 51 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAAGCTGGCGCTCTTTC+TGG | 0.081596 | 8.1:-84745063 | None:intergenic |
| CACCCTTGCCCTTCTTCTTC+TGG | 0.129125 | 8.1:-84745298 | None:intergenic |
| CAACACTATGGTGTTGATAT+TGG | 0.287835 | 8.1:+84744460 | MS.gene022824:CDS |
| TGTGAAGAGTGCTATTGTTC+AGG | 0.325462 | 8.1:+84744405 | MS.gene022824:CDS |
| AGTTCGCACCAACTCATTGT+TGG | 0.421739 | 8.1:-84744374 | None:intergenic |
| ACTTCCCCATGAGAAGTTAC+CGG | 0.438688 | 8.1:-84744302 | None:intergenic |
| ATACGCAGCTACATTCTTGA+AGG | 0.447637 | 8.1:+84745245 | MS.gene022824:intron |
| GTGAGGAGGATTCGTGTTAG+AGG | 0.449573 | 8.1:+84744244 | MS.gene022824:CDS |
| TGTAAACCACATCGAGCAAA+CGG | 0.457912 | 8.1:-84744345 | None:intergenic |
| CAATGGTACCTTCAACACTA+TGG | 0.459815 | 8.1:+84744448 | MS.gene022824:CDS |
| GGTCAATGCGGCAGAGCTGA+TGG | 0.461383 | 8.1:+84745145 | MS.gene022824:CDS |
| ATGCACAAGAGACGTGAAAC+TGG | 0.464049 | 8.1:+84743315 | MS.gene022824:CDS |
| CCTCAATGTGGGCATCAAGC+TGG | 0.484443 | 8.1:-84745075 | None:intergenic |
| TTGAAGGTACCATTGCTTGA+AGG | 0.488302 | 8.1:-84744440 | None:intergenic |
| GCATGCATTTCTTCTCGACC+TGG | 0.488891 | 8.1:+84745124 | MS.gene022824:CDS |
| TATCAACACCATAGTGTTGA+AGG | 0.489500 | 8.1:-84744456 | None:intergenic |
| GAAGTGGAGAGCTTTGAGAT+TGG | 0.494282 | 8.1:+84744276 | MS.gene022824:CDS |
| TCAGCTCTGCCGCATTGACC+AGG | 0.506358 | 8.1:-84745142 | None:intergenic |
| CAGCTACATTCTTGAAGGTA+AGG | 0.509801 | 8.1:+84745250 | MS.gene022824:intron |
| ATTGAGGAGCAGTTTGGTGG+TGG | 0.510507 | 8.1:+84745091 | MS.gene022824:CDS |
| TGAAGGTACCATTGCTTGAA+GGG | 0.514607 | 8.1:-84744439 | None:intergenic |
| GCCCACATTGAGGAGCAGTT+TGG | 0.515176 | 8.1:+84745085 | MS.gene022824:CDS |
| TGGATACCGGTAACTTCTCA+TGG | 0.515609 | 8.1:+84744296 | MS.gene022824:CDS |
| CAAAACCCGTTTGCTCGATG+TGG | 0.521241 | 8.1:+84744339 | MS.gene022824:CDS |
| CAATGCTTCCAACAATGAGT+TGG | 0.525534 | 8.1:+84744366 | MS.gene022824:CDS |
| CACATTGAGGAGCAGTTTGG+TGG | 0.527285 | 8.1:+84745088 | MS.gene022824:CDS |
| GAAGAAACTCCAGAAGAAGA+AGG | 0.530638 | 8.1:+84745289 | MS.gene022824:CDS |
| GTAAACCACATCGAGCAAAC+GGG | 0.544170 | 8.1:-84744344 | None:intergenic |
| CCAGCTTGATGCCCACATTG+AGG | 0.548092 | 8.1:+84745075 | MS.gene022824:CDS |
| AGGAGGATTCGTGTTAGAGG+TGG | 0.553665 | 8.1:+84744247 | MS.gene022824:CDS |
| TCTGCAATTACAGGAGGCTG+AGG | 0.558767 | 8.1:+84744985 | MS.gene022824:intron |
| ATGCTGCTCCCTTCAAGCAA+TGG | 0.568267 | 8.1:+84744431 | MS.gene022824:CDS |
| CTCCAGAAGAAGAAGGGCAA+GGG | 0.571076 | 8.1:+84745296 | MS.gene022824:CDS |
| GGATACCGGTAACTTCTCAT+GGG | 0.577966 | 8.1:+84744297 | MS.gene022824:CDS |
| GTCAATGCGGCAGAGCTGAT+GGG | 0.580186 | 8.1:+84745146 | MS.gene022824:CDS |
| AAGAAACTCCAGAAGAAGAA+GGG | 0.596297 | 8.1:+84745290 | MS.gene022824:CDS |
| ACCAAACTGCTCCTCAATGT+GGG | 0.596753 | 8.1:-84745086 | None:intergenic |
| AAATGTTAGCAAGAAAGAGG+AGG | 0.606920 | 8.1:+84744495 | MS.gene022824:CDS |
| CTGGTGGCAAGAAGAAAGCA+TGG | 0.611110 | 8.1:+84743334 | MS.gene022824:CDS |
| GTTTCATCTAGGTACGAGCT+CGG | 0.613407 | 8.1:+84744181 | MS.gene022824:intron |
| ACTCCAGAAGAAGAAGGGCA+AGG | 0.618644 | 8.1:+84745295 | MS.gene022824:CDS |
| CACCAAACTGCTCCTCAATG+TGG | 0.622269 | 8.1:-84745087 | None:intergenic |
| AGAGCTTTGAGATTGGATAC+CGG | 0.636809 | 8.1:+84744283 | MS.gene022824:CDS |
| TTAGAGGTGGAAATGTGAAG+TGG | 0.659708 | 8.1:+84744260 | MS.gene022824:CDS |
| TCTTCTCGACCTGGTCAATG+CGG | 0.660301 | 8.1:+84745133 | MS.gene022824:CDS |
| ATGGAAACAATACAATCAAG+CGG | 0.663363 | 8.1:-84745321 | None:intergenic |
| CACAAGAGACGTGAAACTGG+TGG | 0.674239 | 8.1:+84743318 | MS.gene022824:CDS |
| GATACCGGTAACTTCTCATG+GGG | 0.694944 | 8.1:+84744298 | MS.gene022824:CDS |
| CAAGCAACAAGACAGTGAGG+AGG | 0.706786 | 8.1:+84744230 | MS.gene022824:CDS |
| TATCAAGCAACAAGACAGTG+AGG | 0.731948 | 8.1:+84744227 | MS.gene022824:CDS |
| GTGGCAAGAAGAAAGCATGG+AGG | 0.807428 | 8.1:+84743337 | MS.gene022824:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTCTGATAAATAATT+AGG | + | chr8.1:84743987-84744006 | MS.gene022824:intron | 10.0% |
| !!! | TTTTTTTAACTAAGATATTT+TGG | + | chr8.1:84744156-84744175 | MS.gene022824:intron | 10.0% |
| !! | CATTATAATATCAAAGAAAA+CGG | - | chr8.1:84744571-84744590 | None:intergenic | 15.0% |
| !! | TATAAAAAAAAGAGTAAAAC+AGG | - | chr8.1:84743387-84743406 | None:intergenic | 15.0% |
| !! | TTGAATATGAAAAAATTCAT+AGG | - | chr8.1:84743236-84743255 | None:intergenic | 15.0% |
| !!! | CACTTTTTTTTTTTTAATGT+GGG | + | chr8.1:84743518-84743537 | MS.gene022824:intron | 15.0% |
| !!! | TCACTTTTTTTTTTTTAATG+TGG | + | chr8.1:84743517-84743536 | MS.gene022824:intron | 15.0% |
| !!! | TTTTGTAATTGTTTTAGATA+TGG | + | chr8.1:84743469-84743488 | MS.gene022824:intron | 15.0% |
| !! | AAAACATGTATGTTTACTTT+CGG | - | chr8.1:84743850-84743869 | None:intergenic | 20.0% |
| !! | AAAACCAGTATAAAAATTGT+GGG | - | chr8.1:84744649-84744668 | None:intergenic | 20.0% |
| !! | ATAATTAGGTTATAGATCAA+TGG | + | chr8.1:84744001-84744020 | MS.gene022824:intron | 20.0% |
| !! | ATAATTATAGCCAAAAGATA+AGG | - | chr8.1:84743898-84743917 | None:intergenic | 20.0% |
| !! | GTATTATTTAATCCTGAAAT+GGG | + | chr8.1:84743747-84743766 | MS.gene022824:intron | 20.0% |
| !! | TAATTATAGCCAAAAGATAA+GGG | - | chr8.1:84743897-84743916 | None:intergenic | 20.0% |
| !! | TATTATTTAATCCTGAAATG+GGG | + | chr8.1:84743748-84743767 | MS.gene022824:intron | 20.0% |
| !! | TCTCAATGTTATTATTTGTT+GGG | + | chr8.1:84744116-84744135 | MS.gene022824:intron | 20.0% |
| !! | TTGGTTGTTTAAATGTTATT+TGG | + | chr8.1:84744667-84744686 | MS.gene022824:intron | 20.0% |
| !! | TTTATATATAATGTGGGAAT+TGG | + | chr8.1:84743560-84743579 | MS.gene022824:intron | 20.0% |
| !!! | AGTTTACATTTCTATTTTCT+GGG | + | chr8.1:84743939-84743958 | MS.gene022824:intron | 20.0% |
| !!! | ATTAATTTAAGCTGTTTTGT+TGG | + | chr8.1:84744790-84744809 | MS.gene022824:intron | 20.0% |
| !!! | TAGTTTACATTTCTATTTTC+TGG | + | chr8.1:84743938-84743957 | MS.gene022824:intron | 20.0% |
| !!! | TTTATTCATCTGAAATTTTG+TGG | + | chr8.1:84744815-84744834 | MS.gene022824:intron | 20.0% |
| !!! | TTTTTTTTTTTTAATGTGGG+TGG | + | chr8.1:84743521-84743540 | MS.gene022824:intron | 20.0% |
| ! | CAAAACCAGTATAAAAATTG+TGG | - | chr8.1:84744650-84744669 | None:intergenic | 25.0% |
| ! | CGTATTATTTAATCCTGAAA+TGG | + | chr8.1:84743746-84743765 | MS.gene022824:intron | 25.0% |
| ! | GTATTCAAGGAAAAAAAGTT+AGG | - | chr8.1:84745229-84745248 | None:intergenic | 25.0% |
| ! | GTCTCAATGTTATTATTTGT+TGG | + | chr8.1:84744115-84744134 | MS.gene022824:intron | 25.0% |
| ! | TATTCCTTAGTAATATGTTC+AGG | + | chr8.1:84744942-84744961 | MS.gene022824:intron | 25.0% |
| ! | TCAATTTCAACATATACATG+AGG | - | chr8.1:84744883-84744902 | None:intergenic | 25.0% |
| ! | TTAAAGATCAGTTAATCACT+TGG | + | chr8.1:84744598-84744617 | MS.gene022824:intron | 25.0% |
| ! | TTAATAATCTCTGCAATTAC+AGG | + | chr8.1:84744976-84744995 | MS.gene022824:intron | 25.0% |
| ! | TTGATTGAAGAAAGATTTGA+AGG | - | chr8.1:84743207-84743226 | None:intergenic | 25.0% |
| ! | TTGGGGTTTATATATAATGT+GGG | + | chr8.1:84743554-84743573 | MS.gene022824:intron | 25.0% |
| !! | ATTTCATTTCCCTTATCTTT+TGG | + | chr8.1:84743885-84743904 | MS.gene022824:intron | 25.0% |
| !! | GTTTAAATGTTATTTGGCTT+GGG | + | chr8.1:84744673-84744692 | MS.gene022824:intron | 25.0% |
| !! | TGTTTAAATGTTATTTGGCT+TGG | + | chr8.1:84744672-84744691 | MS.gene022824:intron | 25.0% |
| !! | TTTGGGGTTTATATATAATG+TGG | + | chr8.1:84743553-84743572 | MS.gene022824:intron | 25.0% |
| !!! | ATATTTTGGTTGTTTCATCT+AGG | + | chr8.1:84744170-84744189 | MS.gene022824:intron | 25.0% |
| !!! | CACAATTTTTATACTGGTTT+TGG | + | chr8.1:84744648-84744667 | MS.gene022824:intron | 25.0% |
| !!! | TGTAATTGTTTTAGATATGG+TGG | + | chr8.1:84743472-84743491 | MS.gene022824:intron | 25.0% |
| AATTGTGGGCATAAGTATAA+AGG | - | chr8.1:84744635-84744654 | None:intergenic | 30.0% | |
| ATTTCAACATATACATGAGG+TGG | - | chr8.1:84744880-84744899 | None:intergenic | 30.0% | |
| CTTTCCTGAACATATTACTA+AGG | - | chr8.1:84744949-84744968 | None:intergenic | 30.0% | |
| GAAAAATGTTAGCAAGAAAG+AGG | + | chr8.1:84744492-84744511 | MS.gene022824:CDS | 30.0% | |
| ! | TATGCCCACAATTTTTATAC+TGG | + | chr8.1:84744642-84744661 | MS.gene022824:intron | 30.0% |
| !!! | GATTGTTGATTTTGAATCTC+AGG | + | chr8.1:84743276-84743295 | MS.gene022824:intron | 30.0% |
| !!! | TAGTTTTAGATGTCTGGATA+AGG | + | chr8.1:84744841-84744860 | MS.gene022824:intron | 30.0% |
| !!! | TGGATTTAGTTTTAGATGTC+TGG | + | chr8.1:84744835-84744854 | MS.gene022824:intron | 30.0% |
| AAATGTTAGCAAGAAAGAGG+AGG | + | chr8.1:84744495-84744514 | MS.gene022824:CDS | 35.0% | |
| AAGAAACTCCAGAAGAAGAA+GGG | + | chr8.1:84745290-84745309 | MS.gene022824:CDS | 35.0% | |
| ATAATCTCTGCAATTACAGG+AGG | + | chr8.1:84744979-84744998 | MS.gene022824:intron | 35.0% | |
| ATCAGAAAATATGTGCTACC+TGG | - | chr8.1:84743979-84743998 | None:intergenic | 35.0% | |
| GAAAGAGGAGGTAATGTTTA+TGG | + | chr8.1:84744507-84744526 | MS.gene022824:intron | 35.0% | |
| GATTTGTGTGTTGAGATTCT+GGG | + | chr8.1:84743427-84743446 | MS.gene022824:intron | 35.0% | |
| ! | CTCTAATTTTCTCTGCACAT+GGG | - | chr8.1:84745038-84745057 | None:intergenic | 35.0% |
| ! | TATCAACACCATAGTGTTGA+AGG | - | chr8.1:84744459-84744478 | None:intergenic | 35.0% |
| ! | TGATTTGTGTGTTGAGATTC+TGG | + | chr8.1:84743426-84743445 | MS.gene022824:intron | 35.0% |
| !! | CAACACTATGGTGTTGATAT+TGG | + | chr8.1:84744460-84744479 | MS.gene022824:CDS | 35.0% |
| !! | GTGGGTGGTTATTTGATTTT+GGG | + | chr8.1:84743536-84743555 | MS.gene022824:intron | 35.0% |
| !! | TGGGATAGTTATTTTGTACC+AGG | + | chr8.1:84743958-84743977 | MS.gene022824:intron | 35.0% |
| !! | TGGGTGGTTATTTGATTTTG+GGG | + | chr8.1:84743537-84743556 | MS.gene022824:intron | 35.0% |
| !! | TGTGGGTGGTTATTTGATTT+TGG | + | chr8.1:84743535-84743554 | MS.gene022824:intron | 35.0% |
| !!! | CTTGATAGTTTTGTGTTAGC+TGG | - | chr8.1:84744214-84744233 | None:intergenic | 35.0% |
| AAATCTTCGTACCCCATTTC+AGG | - | chr8.1:84743762-84743781 | None:intergenic | 40.0% | |
| AGAATGTAGCTGCGTATTCA+AGG | - | chr8.1:84745242-84745261 | None:intergenic | 40.0% | |
| ATACGCAGCTACATTCTTGA+AGG | + | chr8.1:84745245-84745264 | MS.gene022824:intron | 40.0% | |
| CAATGCTTCCAACAATGAGT+TGG | + | chr8.1:84744366-84744385 | MS.gene022824:CDS | 40.0% | |
| CAATGGTACCTTCAACACTA+TGG | + | chr8.1:84744448-84744467 | MS.gene022824:CDS | 40.0% | |
| CAGCTACATTCTTGAAGGTA+AGG | + | chr8.1:84745250-84745269 | MS.gene022824:intron | 40.0% | |
| GAAGAAACTCCAGAAGAAGA+AGG | + | chr8.1:84745289-84745308 | MS.gene022824:CDS | 40.0% | |
| TATCAAGCAACAAGACAGTG+AGG | + | chr8.1:84744227-84744246 | MS.gene022824:CDS | 40.0% | |
| TGTAAACCACATCGAGCAAA+CGG | - | chr8.1:84744348-84744367 | None:intergenic | 40.0% | |
| TTAGAGGTGGAAATGTGAAG+TGG | + | chr8.1:84744260-84744279 | MS.gene022824:CDS | 40.0% | |
| ! | GCTCTAATTTTCTCTGCACA+TGG | - | chr8.1:84745039-84745058 | None:intergenic | 40.0% |
| !! | AGAGCTTTGAGATTGGATAC+CGG | + | chr8.1:84744283-84744302 | MS.gene022824:CDS | 40.0% |
| !! | TGAAGGTACCATTGCTTGAA+GGG | - | chr8.1:84744442-84744461 | None:intergenic | 40.0% |
| !! | TGTGAAGAGTGCTATTGTTC+AGG | + | chr8.1:84744405-84744424 | MS.gene022824:CDS | 40.0% |
| !! | TTGAAGGTACCATTGCTTGA+AGG | - | chr8.1:84744443-84744462 | None:intergenic | 40.0% |
| !!! | ATAGTTTTGTGTTAGCTGGC+TGG | - | chr8.1:84744210-84744229 | None:intergenic | 40.0% |
| ACCAAACTGCTCCTCAATGT+GGG | - | chr8.1:84745089-84745108 | None:intergenic | 45.0% | |
| ACTTCCCCATGAGAAGTTAC+CGG | - | chr8.1:84744305-84744324 | None:intergenic | 45.0% | |
| AGTTCGCACCAACTCATTGT+TGG | - | chr8.1:84744377-84744396 | None:intergenic | 45.0% | |
| ATGCACAAGAGACGTGAAAC+TGG | + | chr8.1:84743315-84743334 | MS.gene022824:CDS | 45.0% | |
| CGCACATGAATGTCTGAACT+GGG | + | chr8.1:84744092-84744111 | MS.gene022824:intron | 45.0% | |
| GACATTCATGTGCGAAGCAT+AGG | - | chr8.1:84744086-84744105 | None:intergenic | 45.0% | |
| GATACCGGTAACTTCTCATG+GGG | + | chr8.1:84744298-84744317 | MS.gene022824:CDS | 45.0% | |
| GCACATGAATGTCTGAACTG+GGG | + | chr8.1:84744093-84744112 | MS.gene022824:intron | 45.0% | |
| GGATACCGGTAACTTCTCAT+GGG | + | chr8.1:84744297-84744316 | MS.gene022824:CDS | 45.0% | |
| GTAAACCACATCGAGCAAAC+GGG | - | chr8.1:84744347-84744366 | None:intergenic | 45.0% | |
| GTTTCATCTAGGTACGAGCT+CGG | + | chr8.1:84744181-84744200 | MS.gene022824:intron | 45.0% | |
| TCGCACATGAATGTCTGAAC+TGG | + | chr8.1:84744091-84744110 | MS.gene022824:intron | 45.0% | |
| TGGATACCGGTAACTTCTCA+TGG | + | chr8.1:84744296-84744315 | MS.gene022824:CDS | 45.0% | |
| !! | GAAGTGGAGAGCTTTGAGAT+TGG | + | chr8.1:84744276-84744295 | MS.gene022824:CDS | 45.0% |
| !!! | TTTTATATATATAATGAAAT+TGG | + | chr8.1:84743400-84743419 | MS.gene022824:intron | 5.0% |
| !!! | TTTTATTTTATTTTCTTATA+AGG | + | chr8.1:84743811-84743830 | MS.gene022824:intron | 5.0% |
| ACTCCAGAAGAAGAAGGGCA+AGG | + | chr8.1:84745295-84745314 | MS.gene022824:CDS | 50.0% | |
| AGGAGGATTCGTGTTAGAGG+TGG | + | chr8.1:84744247-84744266 | MS.gene022824:CDS | 50.0% | |
| ATGCTGCTCCCTTCAAGCAA+TGG | + | chr8.1:84744431-84744450 | MS.gene022824:CDS | 50.0% | |
| CAAAACCCGTTTGCTCGATG+TGG | + | chr8.1:84744339-84744358 | MS.gene022824:CDS | 50.0% | |
| CAAGCAACAAGACAGTGAGG+AGG | + | chr8.1:84744230-84744249 | MS.gene022824:CDS | 50.0% | |
| CACAAGAGACGTGAAACTGG+TGG | + | chr8.1:84743318-84743337 | MS.gene022824:CDS | 50.0% | |
| CACATTGAGGAGCAGTTTGG+TGG | + | chr8.1:84745088-84745107 | MS.gene022824:CDS | 50.0% | |
| CACCAAACTGCTCCTCAATG+TGG | - | chr8.1:84745090-84745109 | None:intergenic | 50.0% | |
| CTCCAGAAGAAGAAGGGCAA+GGG | + | chr8.1:84745296-84745315 | MS.gene022824:CDS | 50.0% | |
| CTGGTGGCAAGAAGAAAGCA+TGG | + | chr8.1:84743334-84743353 | MS.gene022824:CDS | 50.0% | |
| GCATGCATTTCTTCTCGACC+TGG | + | chr8.1:84745124-84745143 | MS.gene022824:CDS | 50.0% | |
| GTGAGGAGGATTCGTGTTAG+AGG | + | chr8.1:84744244-84744263 | MS.gene022824:CDS | 50.0% | |
| TCTGCAATTACAGGAGGCTG+AGG | + | chr8.1:84744985-84745004 | MS.gene022824:intron | 50.0% | |
| TCTTCTCGACCTGGTCAATG+CGG | + | chr8.1:84745133-84745152 | MS.gene022824:CDS | 50.0% | |
| ! | ATTGAGGAGCAGTTTGGTGG+TGG | + | chr8.1:84745091-84745110 | MS.gene022824:CDS | 50.0% |
| ! | GTGGCAAGAAGAAAGCATGG+AGG | + | chr8.1:84743337-84743356 | MS.gene022824:CDS | 50.0% |
| CACCCTTGCCCTTCTTCTTC+TGG | - | chr8.1:84745301-84745320 | None:intergenic | 55.0% | |
| CATCAAGCTGGCGCTCTTTC+TGG | - | chr8.1:84745066-84745085 | None:intergenic | 55.0% | |
| CCAGCTTGATGCCCACATTG+AGG | + | chr8.1:84745075-84745094 | MS.gene022824:CDS | 55.0% | |
| CCTCAATGTGGGCATCAAGC+TGG | - | chr8.1:84745078-84745097 | None:intergenic | 55.0% | |
| GCCCACATTGAGGAGCAGTT+TGG | + | chr8.1:84745085-84745104 | MS.gene022824:CDS | 55.0% | |
| GTCAATGCGGCAGAGCTGAT+GGG | + | chr8.1:84745146-84745165 | MS.gene022824:CDS | 55.0% | |
| GGTCAATGCGGCAGAGCTGA+TGG | + | chr8.1:84745145-84745164 | MS.gene022824:CDS | 60.0% | |
| ! | TCAGCTCTGCCGCATTGACC+AGG | - | chr8.1:84745145-84745164 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 84743183 | 84745328 | 84743183 | ID=MS.gene022824 |
| chr8.1 | mRNA | 84743183 | 84745328 | 84743183 | ID=MS.gene022824.t1;Parent=MS.gene022824 |
| chr8.1 | exon | 84743183 | 84743186 | 84743183 | ID=MS.gene022824.t1.exon1;Parent=MS.gene022824.t1 |
| chr8.1 | CDS | 84743183 | 84743186 | 84743183 | ID=cds.MS.gene022824.t1;Parent=MS.gene022824.t1 |
| chr8.1 | exon | 84743298 | 84743370 | 84743298 | ID=MS.gene022824.t1.exon2;Parent=MS.gene022824.t1 |
| chr8.1 | CDS | 84743298 | 84743370 | 84743298 | ID=cds.MS.gene022824.t1;Parent=MS.gene022824.t1 |
| chr8.1 | exon | 84744192 | 84744516 | 84744192 | ID=MS.gene022824.t1.exon3;Parent=MS.gene022824.t1 |
| chr8.1 | CDS | 84744192 | 84744516 | 84744192 | ID=cds.MS.gene022824.t1;Parent=MS.gene022824.t1 |
| chr8.1 | exon | 84744998 | 84745167 | 84744998 | ID=MS.gene022824.t1.exon4;Parent=MS.gene022824.t1 |
| chr8.1 | CDS | 84744998 | 84745167 | 84744998 | ID=cds.MS.gene022824.t1;Parent=MS.gene022824.t1 |
| chr8.1 | exon | 84745253 | 84745328 | 84745253 | ID=MS.gene022824.t1.exon5;Parent=MS.gene022824.t1 |
| chr8.1 | CDS | 84745253 | 84745328 | 84745253 | ID=cds.MS.gene022824.t1;Parent=MS.gene022824.t1 |
| Gene Sequence |
| Protein sequence |
