Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023496.t1 | KEH20651.1 | 94.1 | 271 | 16 | 0 | 1 | 271 | 1 | 271 | 1.10E-146 | 529.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023496.t1 | Q9LIS1 | 38.8 | 268 | 147 | 8 | 1 | 266 | 164 | 416 | 6.2e-42 | 172.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023496.t1 | B7FLT1 | 94.1 | 271 | 16 | 0 | 1 | 271 | 48 | 318 | 7.8e-147 | 529.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023496 | MS.gene73339 | PPI |
| MS.gene023496 | MS.gene020442 | PPI |
| MS.gene023496 | MS.gene37919 | PPI |
| MS.gene013088 | MS.gene023496 | PPI |
| MS.gene023496 | MS.gene060401 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023496.t1 | MTR_8g081600 | 94.096 | 271 | 16 | 0 | 1 | 271 | 1 | 271 | 0.0 | 524 |
| MS.gene023496.t1 | MTR_2g036780 | 35.793 | 271 | 157 | 6 | 1 | 260 | 164 | 428 | 4.03e-42 | 149 |
| MS.gene023496.t1 | MTR_1g035890 | 32.857 | 280 | 171 | 6 | 1 | 268 | 165 | 439 | 1.94e-40 | 145 |
| MS.gene023496.t1 | MTR_3g100150 | 31.852 | 270 | 172 | 6 | 1 | 261 | 163 | 429 | 3.09e-39 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023496.t1 | AT3G23840 | 38.806 | 268 | 147 | 8 | 1 | 266 | 164 | 416 | 6.47e-45 | 156 |
| MS.gene023496.t1 | AT4G13840 | 33.086 | 269 | 169 | 6 | 1 | 266 | 166 | 426 | 4.28e-42 | 149 |
| MS.gene023496.t1 | AT4G24510 | 30.038 | 263 | 167 | 6 | 1 | 260 | 168 | 416 | 3.22e-37 | 136 |
Find 75 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4.3:-15494821 | MS.gene023496:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4.3:-15494601 | MS.gene023496:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4.3:-15494960 | MS.gene023496:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4.3:-15494767 | MS.gene023496:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4.3:-15495037 | MS.gene023496:CDS |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4.3:+15494829 | None:intergenic |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4.3:-15495036 | MS.gene023496:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4.3:-15494676 | MS.gene023496:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4.3:-15494553 | MS.gene023496:CDS |
| ATATCATTGCCCCTACCATT+AGG | 0.319594 | 4.3:+15494681 | None:intergenic |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4.3:+15494830 | None:intergenic |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4.3:-15494448 | MS.gene023496:CDS |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4.3:-15494385 | MS.gene023496:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4.3:+15494323 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4.3:-15494905 | MS.gene023496:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4.3:-15494820 | MS.gene023496:CDS |
| TATCATTGCCCCTACCATTA+GGG | 0.360008 | 4.3:+15494682 | None:intergenic |
| AGTGTGTAGTAAACAAATCT+TGG | 0.364561 | 4.3:+15494417 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4.3:+15494716 | None:intergenic |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4.3:-15494929 | MS.gene023496:CDS |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4.3:+15494482 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4.3:+15494969 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4.3:-15494411 | MS.gene023496:CDS |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4.3:-15494447 | MS.gene023496:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4.3:+15494733 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4.3:+15494710 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.427066 | 4.3:-15494675 | MS.gene023496:CDS |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 4.3:-15494319 | MS.gene023496:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4.3:+15494774 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4.3:+15494778 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4.3:+15494711 | None:intergenic |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4.3:-15494928 | MS.gene023496:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4.3:-15494357 | MS.gene023496:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4.3:+15494734 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4.3:+15494646 | None:intergenic |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4.3:-15494579 | MS.gene023496:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4.3:-15494288 | MS.gene023496:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4.3:-15494396 | MS.gene023496:CDS |
| GTGTGTAGTAAACAAATCTT+GGG | 0.472684 | 4.3:+15494418 | None:intergenic |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4.3:+15494357 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4.3:+15494900 | None:intergenic |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4.3:+15494980 | None:intergenic |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4.3:+15494795 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4.3:-15494919 | MS.gene023496:CDS |
| GTTTGTCGACCCGACCCTAA+TGG | 0.497568 | 4.3:-15494696 | MS.gene023496:CDS |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4.3:+15494924 | None:intergenic |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4.3:-15494642 | MS.gene023496:CDS |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4.3:+15494777 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4.3:-15494405 | MS.gene023496:CDS |
| TCGACCCGACCCTAATGGTA+GGG | 0.545566 | 4.3:-15494691 | MS.gene023496:CDS |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4.3:-15494410 | MS.gene023496:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4.3:-15494273 | MS.gene023496:CDS |
| TTGCCCCTACCATTAGGGTC+GGG | 0.551150 | 4.3:+15494687 | None:intergenic |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4.3:+15494779 | None:intergenic |
| ATTGCCCCTACCATTAGGGT+CGG | 0.561243 | 4.3:+15494686 | None:intergenic |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4.3:-15494274 | MS.gene023496:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4.3:+15494962 | None:intergenic |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4.3:-15494646 | MS.gene023496:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4.3:-15495035 | MS.gene023496:CDS |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4.3:+15494844 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4.3:+15495047 | None:intergenic |
| GTCGACCCGACCCTAATGGT+AGG | 0.594252 | 4.3:-15494692 | MS.gene023496:CDS |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4.3:-15494915 | MS.gene023496:CDS |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4.3:+15494901 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4.3:-15494406 | MS.gene023496:CDS |
| CGACCCGACCCTAATGGTAG+GGG | 0.607530 | 4.3:-15494690 | MS.gene023496:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4.3:+15494981 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4.3:-15494409 | MS.gene023496:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4.3:+15494848 | None:intergenic |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4.3:-15494741 | MS.gene023496:CDS |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4.3:+15494284 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4.3:-15494652 | MS.gene023496:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4.3:-15494819 | MS.gene023496:CDS |
| GTCGGGTCGACAAACTGTCA+CGG | 0.691405 | 4.3:+15494704 | None:intergenic |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4.3:+15495048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTTATGTGCAATAATT+TGG | - | chr4.3:15494552-15494571 | MS.gene023496:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | - | chr4.3:15494789-15494808 | MS.gene023496:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | - | chr4.3:15494872-15494891 | MS.gene023496:CDS | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | - | chr4.3:15494766-15494785 | MS.gene023496:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | - | chr4.3:15494871-15494890 | MS.gene023496:CDS | 20.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | + | chr4.3:15494548-15494567 | None:intergenic | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | - | chr4.3:15494788-15494807 | MS.gene023496:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | + | chr4.3:15494840-15494859 | None:intergenic | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | - | chr4.3:15494790-15494809 | MS.gene023496:CDS | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | - | chr4.3:15494283-15494302 | MS.gene023496:CDS | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | - | chr4.3:15494718-15494737 | MS.gene023496:CDS | 25.0% |
| AAATGACCAATTGATATGCA+AGG | - | chr4.3:15494667-15494686 | MS.gene023496:CDS | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | - | chr4.3:15494500-15494519 | MS.gene023496:CDS | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | - | chr4.3:15494498-15494517 | MS.gene023496:CDS | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | + | chr4.3:15494543-15494562 | None:intergenic | 30.0% | |
| AGTGTGTAGTAAACAAATCT+TGG | + | chr4.3:15494905-15494924 | None:intergenic | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | - | chr4.3:15494499-15494518 | MS.gene023496:CDS | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | + | chr4.3:15494544-15494563 | None:intergenic | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | - | chr4.3:15494282-15494301 | MS.gene023496:CDS | 30.0% | |
| GTGTGTAGTAAACAAATCTT+GGG | + | chr4.3:15494904-15494923 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | - | chr4.3:15495000-15495019 | MS.gene023496:CDS | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | - | chr4.3:15494284-15494303 | MS.gene023496:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | + | chr4.3:15494999-15495018 | None:intergenic | 30.0% | |
| TTCTTGCAAGTTGTTCATTA+GGG | + | chr4.3:15494492-15494511 | None:intergenic | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | - | chr4.3:15494909-15494928 | MS.gene023496:CDS | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | - | chr4.3:15494908-15494927 | MS.gene023496:CDS | 30.0% | |
| ! | AGTTTTACCATTTCATCTTC+TGG | + | chr4.3:15495010-15495029 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | + | chr4.3:15494372-15494391 | None:intergenic | 30.0% |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | + | chr4.3:15494315-15494334 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | + | chr4.3:15494371-15494390 | None:intergenic | 30.0% |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | - | chr4.3:15494812-15494831 | MS.gene023496:CDS | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | + | chr4.3:15494447-15494466 | None:intergenic | 30.0% |
| AAATCCGAGCTTAATGTGTA+TGG | - | chr4.3:15495031-15495050 | MS.gene023496:CDS | 35.0% | |
| AGGAACCAGCTACATTTAAA+CGG | - | chr4.3:15494390-15494409 | MS.gene023496:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | + | chr4.3:15494965-15494984 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | - | chr4.3:15494962-15494981 | MS.gene023496:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | + | chr4.3:15495038-15495057 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | + | chr4.3:15494545-15494564 | None:intergenic | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | - | chr4.3:15495046-15495065 | MS.gene023496:CDS | 35.0% | |
| GTTCTTGCAAGTTGTTCATT+AGG | + | chr4.3:15494493-15494512 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | - | chr4.3:15495045-15495064 | MS.gene023496:CDS | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | - | chr4.3:15494910-15494929 | MS.gene023496:CDS | 35.0% | |
| ! | ATGAAATCTGAAGCTGAATG+TGG | + | chr4.3:15494275-15494294 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | - | chr4.3:15494370-15494389 | MS.gene023496:CDS | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | + | chr4.3:15494373-15494392 | None:intergenic | 35.0% |
| ! | TGAAATCTGAAGCTGAATGT+GGG | + | chr4.3:15494274-15494293 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | + | chr4.3:15494360-15494379 | None:intergenic | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | + | chr4.3:15494387-15494406 | None:intergenic | 35.0% |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | + | chr4.3:15494442-15494461 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | + | chr4.3:15494443-15494462 | None:intergenic | 35.0% |
| ACGGATCTTGGAATGTTGAA+GGG | + | chr4.3:15494341-15494360 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+AGG | + | chr4.3:15494641-15494660 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | - | chr4.3:15494673-15494692 | MS.gene023496:CDS | 40.0% | |
| CCCAGCCAACAACAAAAAAA+TGG | - | chr4.3:15494439-15494458 | MS.gene023496:CDS | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | + | chr4.3:15494676-15494695 | None:intergenic | 40.0% | |
| GGAACCAGCTACATTTAAAC+GGG | - | chr4.3:15494391-15494410 | MS.gene023496:CDS | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | - | chr4.3:15494644-15494663 | MS.gene023496:CDS | 40.0% | |
| TATCATTGCCCCTACCATTA+GGG | + | chr4.3:15494640-15494659 | None:intergenic | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | + | chr4.3:15494398-15494417 | None:intergenic | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | + | chr4.3:15494478-15494497 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | - | chr4.3:15494643-15494662 | MS.gene023496:CDS | 40.0% | |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | + | chr4.3:15494331-15494350 | None:intergenic | 40.0% |
| ! | GTCTCAACACCCCTTAATTT+TGG | - | chr4.3:15494359-15494378 | MS.gene023496:CDS | 40.0% |
| !! | TACATTTAAACGGGTTGACC+CGG | - | chr4.3:15494400-15494419 | MS.gene023496:CDS | 40.0% |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | - | chr4.3:15494733-15494752 | MS.gene023496:CDS | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | - | chr4.3:15494946-15494965 | MS.gene023496:CDS | 40.0% |
| GACGGATCTTGGAATGTTGA+AGG | + | chr4.3:15494342-15494361 | None:intergenic | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | - | chr4.3:15494914-15494933 | MS.gene023496:CDS | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | + | chr4.3:15494474-15494493 | None:intergenic | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | - | chr4.3:15494913-15494932 | MS.gene023496:CDS | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | - | chr4.3:15494677-15494696 | MS.gene023496:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | - | chr4.3:15494934-15494953 | MS.gene023496:CDS | 45.0% |
| AACTGTCACGGTTGTGGGTT+CGG | + | chr4.3:15494606-15494625 | None:intergenic | 50.0% | |
| ATTGCCCCTACCATTAGGGT+CGG | + | chr4.3:15494636-15494655 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | + | chr4.3:15494611-15494630 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | - | chr4.3:15494740-15494759 | MS.gene023496:CDS | 50.0% | |
| GGATCCAATGATCACCAACC+GGG | + | chr4.3:15494421-15494440 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | + | chr4.3:15494422-15494441 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | + | chr4.3:15494589-15494608 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | + | chr4.3:15494612-15494631 | None:intergenic | 50.0% | |
| TTCGGATCCTTCTCGAACTC+GGG | + | chr4.3:15494588-15494607 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | + | chr4.3:15494527-15494546 | None:intergenic | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | - | chr4.3:15494414-15494433 | MS.gene023496:CDS | 50.0% |
| !! | TTTAAACGGGTTGACCCGGT+TGG | - | chr4.3:15494404-15494423 | MS.gene023496:CDS | 50.0% |
| CTTCAAGGGGTGGGAGATGA+AGG | - | chr4.3:15494923-15494942 | MS.gene023496:CDS | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | + | chr4.3:15494618-15494637 | None:intergenic | 55.0% | |
| GTTTGTCGACCCGACCCTAA+TGG | - | chr4.3:15494623-15494642 | MS.gene023496:CDS | 55.0% | |
| TCGACCCGACCCTAATGGTA+GGG | - | chr4.3:15494628-15494647 | MS.gene023496:CDS | 55.0% | |
| TGCATAGCCCGAGTTCGAGA+AGG | - | chr4.3:15494578-15494597 | MS.gene023496:CDS | 55.0% | |
| TTGCCCCTACCATTAGGGTC+GGG | + | chr4.3:15494635-15494654 | None:intergenic | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | + | chr4.3:15494353-15494372 | None:intergenic | 55.0% |
| CGACCCGACCCTAATGGTAG+GGG | - | chr4.3:15494629-15494648 | MS.gene023496:CDS | 60.0% | |
| GTCGACCCGACCCTAATGGT+AGG | - | chr4.3:15494627-15494646 | MS.gene023496:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15494263 | 15495078 | 15494263 | ID=MS.gene023496 |
| chr4.3 | mRNA | 15494263 | 15495078 | 15494263 | ID=MS.gene023496.t1;Parent=MS.gene023496 |
| chr4.3 | exon | 15494263 | 15495078 | 15494263 | ID=MS.gene023496.t1.exon1;Parent=MS.gene023496.t1 |
| chr4.3 | CDS | 15494263 | 15495078 | 15494263 | ID=cds.MS.gene023496.t1;Parent=MS.gene023496.t1 |
| Gene Sequence |
| Protein sequence |
