Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024871.t1 | XP_003610723.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 2.30E-175 | 624.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024871.t1 | Q43317 | 85.8 | 325 | 46 | 0 | 1 | 325 | 1 | 325 | 1.4e-157 | 557.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024871.t1 | B7FKU7 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 1.6e-175 | 624.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024871 | MS.gene47527 | PPI |
| MS.gene024871 | MS.gene008717 | PPI |
| MS.gene024871 | MS.gene02466 | PPI |
| MS.gene054826 | MS.gene024871 | PPI |
| MS.gene024871 | MS.gene26579 | PPI |
| MS.gene024871 | MS.gene39577 | PPI |
| MS.gene058651 | MS.gene024871 | PPI |
| MS.gene024871 | MS.gene023918 | PPI |
| MS.gene024871 | MS.gene52446 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024871.t1 | MTR_5g006340 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 646 |
| MS.gene024871.t1 | MTR_1g103690 | 93.231 | 325 | 22 | 0 | 1 | 325 | 1 | 325 | 0.0 | 566 |
| MS.gene024871.t1 | MTR_1g081610 | 87.346 | 324 | 41 | 0 | 1 | 324 | 1 | 324 | 0.0 | 527 |
| MS.gene024871.t1 | MTR_4g087490 | 70.126 | 318 | 95 | 0 | 8 | 325 | 47 | 364 | 4.76e-169 | 474 |
| MS.gene024871.t1 | MTR_1g081620 | 72.897 | 321 | 87 | 0 | 4 | 324 | 3 | 323 | 2.31e-165 | 463 |
| MS.gene024871.t1 | MTR_1g081625 | 73.750 | 320 | 84 | 0 | 5 | 324 | 4 | 323 | 1.02e-161 | 454 |
| MS.gene024871.t1 | MTR_4g087510 | 65.723 | 318 | 100 | 2 | 8 | 325 | 47 | 355 | 2.64e-156 | 441 |
| MS.gene024871.t1 | MTR_7g078070 | 62.025 | 316 | 120 | 0 | 6 | 321 | 59 | 374 | 3.62e-144 | 412 |
| MS.gene024871.t1 | MTR_7g078070 | 62.662 | 308 | 115 | 0 | 14 | 321 | 7 | 314 | 3.71e-142 | 404 |
| MS.gene024871.t1 | MTR_7g087110 | 63.175 | 315 | 106 | 1 | 7 | 321 | 64 | 368 | 2.87e-136 | 391 |
| MS.gene024871.t1 | MTR_4g087520 | 74.074 | 270 | 70 | 0 | 56 | 325 | 1 | 270 | 2.06e-134 | 383 |
| MS.gene024871.t1 | MTR_1g081640 | 70.318 | 283 | 84 | 0 | 3 | 285 | 2 | 284 | 7.31e-130 | 373 |
| MS.gene024871.t1 | MTR_7g078070 | 62.989 | 281 | 104 | 0 | 41 | 321 | 1 | 281 | 7.53e-129 | 369 |
| MS.gene024871.t1 | MTR_5g095670 | 29.462 | 353 | 190 | 6 | 12 | 307 | 48 | 398 | 1.39e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024871.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene024871.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene024871.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene024871.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene024871.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene024871.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.07e-166 | 470 |
| MS.gene024871.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.24e-166 | 470 |
| MS.gene024871.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene024871.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene024871.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene024871.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene024871.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene024871.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene024871.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene024871.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene024871.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene024871.t1 | AT3G59760 | 75.172 | 290 | 72 | 0 | 7 | 296 | 112 | 401 | 5.61e-151 | 431 |
| MS.gene024871.t1 | AT3G22460 | 78.519 | 270 | 38 | 1 | 56 | 325 | 1 | 250 | 3.89e-150 | 422 |
| MS.gene024871.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene024871.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene024871.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene024871.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene024871.t1 | AT3G61440 | 61.218 | 312 | 121 | 0 | 10 | 321 | 51 | 362 | 1.26e-135 | 390 |
| MS.gene024871.t1 | AT3G03630 | 61.562 | 320 | 113 | 1 | 4 | 323 | 95 | 404 | 3.51e-132 | 382 |
| MS.gene024871.t1 | AT3G61440 | 62.782 | 266 | 99 | 0 | 56 | 321 | 1 | 266 | 4.71e-117 | 339 |
| MS.gene024871.t1 | AT3G22460 | 86.188 | 181 | 25 | 0 | 8 | 188 | 8 | 188 | 2.27e-114 | 329 |
| MS.gene024871.t1 | AT5G28030 | 64.919 | 248 | 87 | 0 | 4 | 251 | 3 | 250 | 2.89e-111 | 324 |
| MS.gene024871.t1 | AT3G61440 | 59.160 | 262 | 107 | 0 | 10 | 271 | 51 | 312 | 1.03e-108 | 320 |
| MS.gene024871.t1 | AT3G61440 | 61.667 | 240 | 92 | 0 | 82 | 321 | 2 | 241 | 7.35e-103 | 302 |
| MS.gene024871.t1 | AT5G28020 | 67.932 | 237 | 76 | 0 | 88 | 324 | 1 | 237 | 2.04e-102 | 300 |
| MS.gene024871.t1 | AT1G55880 | 28.177 | 362 | 200 | 6 | 4 | 307 | 36 | 395 | 2.97e-38 | 140 |
| MS.gene024871.t1 | AT1G55880 | 30.833 | 240 | 124 | 3 | 12 | 210 | 44 | 282 | 3.97e-32 | 122 |
Find 89 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGACGCATTTGTTTC+TGG | 0.143270 | 5.4:+2132981 | MS.gene024871:CDS |
| AGAATCATTCTATTAGCTTT+TGG | 0.227837 | 5.4:+2132711 | MS.gene024871:CDS |
| GCTCCTTTCATTCCCTTTGC+AGG | 0.253208 | 5.4:-2132756 | None:intergenic |
| GATAAAACTAACCTTTATAT+TGG | 0.258346 | 5.4:-2133060 | None:intergenic |
| GCCAAAAGGCCAGAAAATTC+TGG | 0.272006 | 5.4:+2134611 | MS.gene024871:CDS |
| AGAGCAAAATTCCAATATAA+AGG | 0.317751 | 5.4:+2133049 | MS.gene024871:CDS |
| TTGTAGGTGGGAATATCTTC+TGG | 0.327966 | 5.4:+2134560 | MS.gene024871:intron |
| GTCTATTTAGATACACTAAT+GGG | 0.361833 | 5.4:-2132166 | None:intergenic |
| TGCCCGAGTTGCTGCAAAAC+TGG | 0.363669 | 5.4:+2132205 | MS.gene024871:CDS |
| ATGCCAGTGTTACCACTTGT+TGG | 0.374604 | 5.4:-2132612 | None:intergenic |
| AAACCACCGGTCCAGAGATA+TGG | 0.380421 | 5.4:+2132943 | MS.gene024871:CDS |
| AAATTGACGCATTTGTTTCT+GGG | 0.385410 | 5.4:+2132982 | MS.gene024871:CDS |
| TGGCATTGGATTAGCCTTCA+TGG | 0.398016 | 5.4:+2132629 | MS.gene024871:CDS |
| ATATTTCCCAGCACCGGTTA+TGG | 0.401918 | 5.4:-2133021 | None:intergenic |
| TGCTGCAAAACTGGAATTGA+TGG | 0.408030 | 5.4:+2132214 | MS.gene024871:CDS |
| ATTGGTGCTGGCTTTGTCCC+TGG | 0.414143 | 5.4:+2133735 | MS.gene024871:CDS |
| AGTCTATTTAGATACACTAA+TGG | 0.416944 | 5.4:-2132167 | None:intergenic |
| CTCCTTTCATTCCCTTTGCA+GGG | 0.417063 | 5.4:-2132755 | None:intergenic |
| TTTGTTTCTGGGATAGGTAC+TGG | 0.422736 | 5.4:+2132993 | MS.gene024871:CDS |
| GTGGAGAGTCCAGTGCTCTC+AGG | 0.426755 | 5.4:+2133209 | MS.gene024871:CDS |
| TTTCTCTTTATGTAGCTGAT+TGG | 0.431372 | 5.4:+2133176 | MS.gene024871:intron |
| ATTTGTGCTGTGTAGTTGAT+TGG | 0.433507 | 5.4:+2132137 | MS.gene024871:intron |
| CTTTCAAGACTCATTGAAGC+AGG | 0.439398 | 5.4:-2132687 | None:intergenic |
| TTATATACCTTAGGATTGGC+AGG | 0.440849 | 5.4:-2132846 | None:intergenic |
| TCCGTGCCTTTCCATATCTC+TGG | 0.444845 | 5.4:-2132954 | None:intergenic |
| TTTAAGAGCAAGAAGCTTTG+CGG | 0.453369 | 5.4:-2134346 | None:intergenic |
| GGTGGTACCATAACCGGTGC+TGG | 0.455664 | 5.4:+2133014 | MS.gene024871:CDS |
| CCAAAAGGCCAGAAAATTCT+GGG | 0.458163 | 5.4:+2134612 | MS.gene024871:CDS |
| GGTACTGGTGGTACCATAAC+CGG | 0.463243 | 5.4:+2133008 | MS.gene024871:CDS |
| AAGCTTCTTGCTCTTAAAGA+AGG | 0.465193 | 5.4:+2134351 | MS.gene024871:CDS |
| AACATGGCGGTCGAAAGGTC+TGG | 0.479511 | 5.4:+2132011 | None:intergenic |
| AATTATGAGCTTGTATCCCT+TGG | 0.481319 | 5.4:-2132658 | None:intergenic |
| AGCCTTCATGGCAGCAGCCA+AGG | 0.482589 | 5.4:+2132641 | MS.gene024871:CDS |
| TTCAAATTGTTGAAGTATGT+AGG | 0.487581 | 5.4:-2132820 | None:intergenic |
| GCCTTTCCATATCTCTGGAC+CGG | 0.488943 | 5.4:-2132949 | None:intergenic |
| AAGATTCAAGGGATTGGTGC+TGG | 0.499879 | 5.4:+2133723 | MS.gene024871:CDS |
| CCTCACAAGATTCAAGGGAT+TGG | 0.512359 | 5.4:+2133717 | MS.gene024871:CDS |
| TCAGGTCCTCACAAGATTCA+AGG | 0.512591 | 5.4:+2133711 | MS.gene024871:intron |
| AGGTACCTCTCGCCAAAGCT+TGG | 0.513254 | 5.4:-2135540 | None:intergenic |
| TCCCTTGGCTGCTGCCATGA+AGG | 0.514115 | 5.4:-2132643 | None:intergenic |
| CTGATAACATGGCGGTCGAA+AGG | 0.517264 | 5.4:+2132006 | None:intergenic |
| TGGAGAGTCCAGTGCTCTCA+GGG | 0.517606 | 5.4:+2133210 | MS.gene024871:CDS |
| ACAAGTGGTAACACTGGCAT+TGG | 0.517640 | 5.4:+2132615 | MS.gene024871:CDS |
| GCTATTTGAGTCAGTGAGAC+GGG | 0.519281 | 5.4:+2135572 | MS.gene024871:CDS |
| GGGGCTTATCACACCTGGAC+AGG | 0.526431 | 5.4:+2132438 | MS.gene024871:CDS |
| GAGAGCACTGGACTCTCCAC+TGG | 0.526480 | 5.4:-2133206 | None:intergenic |
| AAAGTTATACCAACCTGTCC+AGG | 0.526700 | 5.4:-2132451 | None:intergenic |
| GACGCATTTGTTTCTGGGAT+AGG | 0.530954 | 5.4:+2132987 | MS.gene024871:CDS |
| GACCCTGCAAAGGGAATGAA+AGG | 0.540714 | 5.4:+2132753 | MS.gene024871:CDS |
| CATGCTCTAGTGTAAAAGAC+AGG | 0.541025 | 5.4:+2132240 | MS.gene024871:CDS |
| TGTTGAAGTATGTAGGCATT+GGG | 0.542376 | 5.4:-2132813 | None:intergenic |
| CTTTATGTAGCTGATTGGTG+TGG | 0.542393 | 5.4:+2133181 | MS.gene024871:intron |
| TGAAAACCCTGCCAATCCTA+AGG | 0.544470 | 5.4:+2132839 | MS.gene024871:CDS |
| GAGATATGGAAAGGCACGGA+TGG | 0.545661 | 5.4:+2132957 | MS.gene024871:CDS |
| GATTGCTGATGCAGAAGAGA+AGG | 0.556187 | 5.4:+2132417 | MS.gene024871:CDS |
| GAGAAGGGGCTTATCACACC+TGG | 0.558309 | 5.4:+2132433 | MS.gene024871:CDS |
| CAGGTCCTCACAAGATTCAA+GGG | 0.561138 | 5.4:+2133712 | MS.gene024871:intron |
| GAGTTTATATACCTTAGGAT+TGG | 0.561288 | 5.4:-2132850 | None:intergenic |
| GTGGTACCATAACCGGTGCT+GGG | 0.564241 | 5.4:+2133015 | MS.gene024871:CDS |
| CTGCAATTAAGATAGCCAAA+AGG | 0.568848 | 5.4:+2134597 | MS.gene024871:CDS |
| TTTAAGATATTTCCCAGCAC+CGG | 0.569437 | 5.4:-2133027 | None:intergenic |
| GCCTTCATGGCAGCAGCCAA+GGG | 0.575694 | 5.4:+2132642 | MS.gene024871:CDS |
| ATTGCTGATGCAGAAGAGAA+GGG | 0.577230 | 5.4:+2132418 | MS.gene024871:CDS |
| TGCTATTTGAGTCAGTGAGA+CGG | 0.579355 | 5.4:+2135571 | MS.gene024871:CDS |
| TTGTTGAAGTATGTAGGCAT+TGG | 0.581978 | 5.4:-2132814 | None:intergenic |
| GATTCAGGGCTCGAAAGTCA+TGG | 0.583977 | 5.4:-2135604 | None:intergenic |
| AGATATGGAAAGGCACGGAT+GGG | 0.598941 | 5.4:+2132958 | MS.gene024871:CDS |
| TACCACTTGTTGGTTCAATG+AGG | 0.607547 | 5.4:-2132602 | None:intergenic |
| GTTTCTGGGATAGGTACTGG+TGG | 0.607715 | 5.4:+2132996 | MS.gene024871:CDS |
| TTTCCATATCTCTGGACCGG+TGG | 0.608117 | 5.4:-2132946 | None:intergenic |
| ACTCAAATAGCACAGAGGAT+AGG | 0.611244 | 5.4:-2135560 | None:intergenic |
| AGATTAACTTCTAAGACACC+AGG | 0.618092 | 5.4:-2133753 | None:intergenic |
| TATATACCTTAGGATTGGCA+GGG | 0.625254 | 5.4:-2132845 | None:intergenic |
| TTTGGCTATCTTAATTGCAG+CGG | 0.625545 | 5.4:-2134594 | None:intergenic |
| GAACCAACAAGTGGTAACAC+TGG | 0.632333 | 5.4:+2132609 | MS.gene024871:CDS |
| GTCCTCATTGAACCAACAAG+TGG | 0.633075 | 5.4:+2132600 | MS.gene024871:CDS |
| TAGGTACATTATGAAACCAC+CGG | 0.634628 | 5.4:+2132930 | MS.gene024871:intron |
| TCCAGAGATATGGAAAGGCA+CGG | 0.636334 | 5.4:+2132953 | MS.gene024871:CDS |
| TATCTAAATAGACTTGCAGA+TGG | 0.637010 | 5.4:+2132176 | MS.gene024871:CDS |
| ACCGGTCCAGAGATATGGAA+AGG | 0.637929 | 5.4:+2132948 | MS.gene024871:CDS |
| TCTATTTAGATACACTAATG+GGG | 0.639571 | 5.4:-2132165 | None:intergenic |
| GCTGATTGGTGTGGAACCAG+TGG | 0.641769 | 5.4:+2133190 | MS.gene024871:intron |
| GAGAGTCCAGTGCTCTCAGG+GGG | 0.648364 | 5.4:+2133212 | MS.gene024871:CDS |
| TTGCTGATGCAGAAGAGAAG+GGG | 0.651912 | 5.4:+2132419 | MS.gene024871:CDS |
| CCAATCCCTTGAATCTTGTG+AGG | 0.662558 | 5.4:-2133717 | None:intergenic |
| GATTAACTTCTAAGACACCA+GGG | 0.699313 | 5.4:-2133752 | None:intergenic |
| ATTTGAGTCAGTGAGACGGG+AGG | 0.715909 | 5.4:+2135575 | MS.gene024871:CDS |
| GGAGAGTCCAGTGCTCTCAG+GGG | 0.724433 | 5.4:+2133211 | MS.gene024871:CDS |
| CACTGACTCAAATAGCACAG+AGG | 0.749640 | 5.4:-2135565 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTACAATTTTATTTT+CGG | - | chr5.4:2134208-2134227 | None:intergenic | 10.0% |
| !! | ATATCACAATTTAAATGAAA+GGG | - | chr5.4:2134063-2134082 | None:intergenic | 15.0% |
| !! | GATATGAAGATTAAAAATTA+AGG | + | chr5.4:2134976-2134995 | MS.gene024871:intron | 15.0% |
| !! | TATATCACAATTTAAATGAA+AGG | - | chr5.4:2134064-2134083 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATATGCACTTTT+TGG | + | chr5.4:2133410-2133429 | MS.gene024871:intron | 15.0% |
| !!! | AAAAAAAATATGCACTTTTT+GGG | + | chr5.4:2133411-2133430 | MS.gene024871:intron | 15.0% |
| !!! | ATCTCTTTAGTATTTTTTAA+CGG | - | chr5.4:2134897-2134916 | None:intergenic | 15.0% |
| !!! | CATTGATTTTTAAAATTTGT+TGG | + | chr5.4:2133880-2133899 | MS.gene024871:intron | 15.0% |
| !!! | TAAACTTTTATGTATTAATG+TGG | + | chr5.4:2133251-2133270 | MS.gene024871:intron | 15.0% |
| !!! | TTTTAATCTTCATATCAAAA+AGG | - | chr5.4:2134972-2134991 | None:intergenic | 15.0% |
| !! | AAAAAAATTAACTAAAGAGC+TGG | + | chr5.4:2134869-2134888 | MS.gene024871:intron | 20.0% |
| !! | AATACTTCAACTAAAAGTTT+AGG | - | chr5.4:2134666-2134685 | None:intergenic | 20.0% |
| !! | AATATCAAAGTAAAGATGTT+TGG | - | chr5.4:2134539-2134558 | None:intergenic | 20.0% |
| !! | ACATGCAAAACAAATATTAA+TGG | - | chr5.4:2132556-2132575 | None:intergenic | 20.0% |
| !! | ATACTTCAACTAAAAGTTTA+GGG | - | chr5.4:2134665-2134684 | None:intergenic | 20.0% |
| !! | ATATAAACTCATTTGTTCTA+TGG | + | chr5.4:2132863-2132882 | MS.gene024871:intron | 20.0% |
| !! | ATATATATTGTTACCATTGT+AGG | + | chr5.4:2132911-2132930 | MS.gene024871:intron | 20.0% |
| !! | ATTTCAGATTAACATCTAAT+CGG | - | chr5.4:2135366-2135385 | None:intergenic | 20.0% |
| !! | GATAAAACTAACCTTTATAT+TGG | - | chr5.4:2133063-2133082 | None:intergenic | 20.0% |
| !! | TAAATTGTGATATAAACTTG+AGG | + | chr5.4:2134070-2134089 | MS.gene024871:intron | 20.0% |
| !! | TTAACCATAAATGTGTAATT+TGG | + | chr5.4:2134295-2134314 | MS.gene024871:intron | 20.0% |
| !!! | ATTAATATTTGTTTTGCATG+TGG | + | chr5.4:2132555-2132574 | MS.gene024871:intron | 20.0% |
| !!! | CATACATCACTATTTTTTTA+AGG | - | chr5.4:2133859-2133878 | None:intergenic | 20.0% |
| !!! | CTTTACTTTGATATTTTTGT+AGG | + | chr5.4:2134544-2134563 | MS.gene024871:intron | 20.0% |
| !!! | GATGTTATTTAAGGATAAAA+TGG | + | chr5.4:2133320-2133339 | MS.gene024871:intron | 20.0% |
| !!! | TTAATATTTGTTTTGCATGT+GGG | + | chr5.4:2132556-2132575 | MS.gene024871:intron | 20.0% |
| !!! | TTACAAGTTGATGTTATTTA+AGG | + | chr5.4:2133311-2133330 | MS.gene024871:intron | 20.0% |
| !!! | TTAGATGTTAATCTGAAATA+TGG | + | chr5.4:2135367-2135386 | MS.gene024871:intron | 20.0% |
| ! | AAACTGGAAAAAAGAAATGT+AGG | - | chr5.4:2134507-2134526 | None:intergenic | 25.0% |
| ! | AATCTTGTATAACGAAACAT+CGG | - | chr5.4:2135467-2135486 | None:intergenic | 25.0% |
| ! | AATTGATGTGTTGTATTAGA+AGG | + | chr5.4:2134221-2134240 | MS.gene024871:intron | 25.0% |
| ! | ACAATTAGATGCAAAAACTA+TGG | - | chr5.4:2133950-2133969 | None:intergenic | 25.0% |
| ! | ACCATATCTAAATGTAATAG+TGG | - | chr5.4:2135061-2135080 | None:intergenic | 25.0% |
| ! | AGAGCAAAATTCCAATATAA+AGG | + | chr5.4:2133049-2133068 | MS.gene024871:CDS | 25.0% |
| ! | AGTCTATTTAGATACACTAA+TGG | - | chr5.4:2132170-2132189 | None:intergenic | 25.0% |
| ! | ATAAAAGTTTATAACTCACC+AGG | - | chr5.4:2133242-2133261 | None:intergenic | 25.0% |
| ! | ATCTTCCTAAGTATATGTTT+GGG | + | chr5.4:2133080-2133099 | MS.gene024871:intron | 25.0% |
| ! | ATGATGACAACATGAAATTA+CGG | + | chr5.4:2134936-2134955 | MS.gene024871:intron | 25.0% |
| ! | ATGTTATATATTTGACATGC+AGG | + | chr5.4:2132380-2132399 | MS.gene024871:intron | 25.0% |
| ! | ATTTAAGGATAAAATGGAAG+AGG | + | chr5.4:2133326-2133345 | MS.gene024871:intron | 25.0% |
| ! | CAAATGAGTTTATATACCTT+AGG | - | chr5.4:2132858-2132877 | None:intergenic | 25.0% |
| ! | CTATTACATTTAGATATGGT+TGG | + | chr5.4:2135061-2135080 | MS.gene024871:intron | 25.0% |
| ! | CTTTATTGAATTCGAACTTT+CGG | - | chr5.4:2135294-2135313 | None:intergenic | 25.0% |
| ! | GAGAATCTTCTTTCAATATT+TGG | - | chr5.4:2133566-2133585 | None:intergenic | 25.0% |
| ! | GTCTATTTAGATACACTAAT+GGG | - | chr5.4:2132169-2132188 | None:intergenic | 25.0% |
| ! | TAACATAATCGTTAAGCATA+CGG | + | chr5.4:2134721-2134740 | MS.gene024871:intron | 25.0% |
| ! | TAATCTTTGCATTATTCAAG+AGG | + | chr5.4:2133817-2133836 | MS.gene024871:intron | 25.0% |
| ! | TATCTTCCTAAGTATATGTT+TGG | + | chr5.4:2133079-2133098 | MS.gene024871:intron | 25.0% |
| ! | TCCACTATTACATTTAGATA+TGG | + | chr5.4:2135057-2135076 | MS.gene024871:intron | 25.0% |
| ! | TCTATTTAGATACACTAATG+GGG | - | chr5.4:2132168-2132187 | None:intergenic | 25.0% |
| ! | TGTTTCGTTATACAAGATTA+TGG | + | chr5.4:2135468-2135487 | MS.gene024871:intron | 25.0% |
| ! | TTCAAATTGTTGAAGTATGT+AGG | - | chr5.4:2132823-2132842 | None:intergenic | 25.0% |
| ! | TTCGACAAAGTAGATATTAA+GGG | - | chr5.4:2134432-2134451 | None:intergenic | 25.0% |
| !! | AAGGCTGTAATTTTATGTTT+TGG | - | chr5.4:2135215-2135234 | None:intergenic | 25.0% |
| !! | TAGATAGAAATGTTAGTTTC+CGG | - | chr5.4:2134831-2134850 | None:intergenic | 25.0% |
| !! | TAGGTTTAGAACTTACAAAT+AGG | - | chr5.4:2134377-2134396 | None:intergenic | 25.0% |
| !! | TATATATTGATCAAAGTGTC+AGG | - | chr5.4:2132898-2132917 | None:intergenic | 25.0% |
| !!! | ACTTTGATATTTTTGTAGGT+GGG | + | chr5.4:2134548-2134567 | MS.gene024871:intron | 25.0% |
| !!! | AGAATCATTCTATTAGCTTT+TGG | + | chr5.4:2132711-2132730 | MS.gene024871:CDS | 25.0% |
| !!! | AGTAACTCCTAAAGTTTTTT+AGG | - | chr5.4:2133377-2133396 | None:intergenic | 25.0% |
| !!! | ATCGTTATGAGTATTGATTT+TGG | + | chr5.4:2132277-2132296 | MS.gene024871:intron | 25.0% |
| !!! | CATCACTATTTTTTTAAGGA+TGG | - | chr5.4:2133855-2133874 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTTGTAATTGGT+TGG | + | chr5.4:2134449-2134468 | MS.gene024871:intron | 25.0% |
| !!! | TACTTTGATATTTTTGTAGG+TGG | + | chr5.4:2134547-2134566 | MS.gene024871:intron | 25.0% |
| !!! | TGTCGAACTTTTTTTGTAAT+TGG | + | chr5.4:2134445-2134464 | MS.gene024871:intron | 25.0% |
| !!! | TTACCAATTTTGTCGTTTTA+TGG | - | chr5.4:2134704-2134723 | None:intergenic | 25.0% |
| AAAATTGACGCATTTGTTTC+TGG | + | chr5.4:2132981-2133000 | MS.gene024871:CDS | 30.0% | |
| AAGTAAGCTTAAACAACTTG+TGG | + | chr5.4:2133793-2133812 | MS.gene024871:intron | 30.0% | |
| AGGAAGACCTAAAAAACTTT+AGG | + | chr5.4:2133367-2133386 | MS.gene024871:intron | 30.0% | |
| ATACATTGTTTACCTTGACT+TGG | + | chr5.4:2133992-2134011 | MS.gene024871:intron | 30.0% | |
| ATATATTTGACATGCAGGAT+TGG | + | chr5.4:2132385-2132404 | MS.gene024871:intron | 30.0% | |
| ATCAGACAAGAATACGTTAA+GGG | - | chr5.4:2132117-2132136 | None:intergenic | 30.0% | |
| ATGTTGTCTACAGTTTGATA+AGG | + | chr5.4:2133906-2133925 | MS.gene024871:intron | 30.0% | |
| ATTCAATAAAGAAATGCTGC+AGG | + | chr5.4:2135303-2135322 | MS.gene024871:intron | 30.0% | |
| ATTTCATGTTGTCATCATTG+TGG | - | chr5.4:2134934-2134953 | None:intergenic | 30.0% | |
| GAGTTTATATACCTTAGGAT+TGG | - | chr5.4:2132853-2132872 | None:intergenic | 30.0% | |
| GTTCCATAAAACGACAAAAT+TGG | + | chr5.4:2134698-2134717 | MS.gene024871:intron | 30.0% | |
| GTTCGACAAAGTAGATATTA+AGG | - | chr5.4:2134433-2134452 | None:intergenic | 30.0% | |
| GTTTCATAATGTACCTACAA+TGG | - | chr5.4:2132927-2132946 | None:intergenic | 30.0% | |
| TATCAGACAAGAATACGTTA+AGG | - | chr5.4:2132118-2132137 | None:intergenic | 30.0% | |
| TATCTAAATAGACTTGCAGA+TGG | + | chr5.4:2132176-2132195 | MS.gene024871:CDS | 30.0% | |
| TCTGCCAAATTACACATTTA+TGG | - | chr5.4:2134302-2134321 | None:intergenic | 30.0% | |
| TCTTCTTTCAATATTTGGAC+AGG | - | chr5.4:2133561-2133580 | None:intergenic | 30.0% | |
| TGTTTGGTAAACTACAAAAC+TGG | - | chr5.4:2134523-2134542 | None:intergenic | 30.0% | |
| TTTCTCTTTATGTAGCTGAT+TGG | + | chr5.4:2133176-2133195 | MS.gene024871:intron | 30.0% | |
| ! | AAATTGACGCATTTGTTTCT+GGG | + | chr5.4:2132982-2133001 | MS.gene024871:CDS | 30.0% |
| ! | ACTAGAATTGTGTTTGAGAT+TGG | + | chr5.4:2132324-2132343 | MS.gene024871:intron | 30.0% |
| ! | AGATAGAAATGTTAGTTTCC+GGG | - | chr5.4:2134830-2134849 | None:intergenic | 30.0% |
| !! | AATATGCACTTCTCTGAAAT+TGG | + | chr5.4:2133455-2133474 | MS.gene024871:intron | 30.0% |
| !! | AGTAGTATTTTGCCACTTAT+TGG | + | chr5.4:2134019-2134038 | MS.gene024871:intron | 30.0% |
| !! | ATATGCACTTCTCTGAAATT+GGG | + | chr5.4:2133456-2133475 | MS.gene024871:intron | 30.0% |
| !! | GTTAATGTTCCATTTTGACA+TGG | + | chr5.4:2135503-2135522 | MS.gene024871:intron | 30.0% |
| AAATGAAAGGGTTCTCAAAC+TGG | - | chr5.4:2134051-2134070 | None:intergenic | 35.0% | |
| AAGCTTCTTGCTCTTAAAGA+AGG | + | chr5.4:2134351-2134370 | MS.gene024871:CDS | 35.0% | |
| AATTATGAGCTTGTATCCCT+TGG | - | chr5.4:2132661-2132680 | None:intergenic | 35.0% | |
| ACTCATTTGTTCTATGGCAA+TGG | + | chr5.4:2132869-2132888 | MS.gene024871:intron | 35.0% | |
| AGTCATGCCATCAATGAATT+CGG | + | chr5.4:2135092-2135111 | MS.gene024871:intron | 35.0% | |
| ATACTACTTCAACCAAGTCA+AGG | - | chr5.4:2134007-2134026 | None:intergenic | 35.0% | |
| ATGGAAGAGGATCTGATTAA+AGG | + | chr5.4:2133339-2133358 | MS.gene024871:intron | 35.0% | |
| ATTTGTGCTGTGTAGTTGAT+TGG | + | chr5.4:2132137-2132156 | MS.gene024871:intron | 35.0% | |
| CCATAGAAAAAGCTATAAGC+TGG | + | chr5.4:2133510-2133529 | MS.gene024871:intron | 35.0% | |
| CTCTTGACTTTGTAAATGTG+TGG | + | chr5.4:2135252-2135271 | MS.gene024871:intron | 35.0% | |
| CTGAGCTAAAAAATAGCGAT+CGG | - | chr5.4:2132089-2132108 | None:intergenic | 35.0% | |
| CTGCAATTAAGATAGCCAAA+AGG | + | chr5.4:2134597-2134616 | MS.gene024871:CDS | 35.0% | |
| CTTGTCCCAAACATATACTT+AGG | - | chr5.4:2133088-2133107 | None:intergenic | 35.0% | |
| GTGCATTCTATGAAATGTTG+TGG | + | chr5.4:2132503-2132522 | MS.gene024871:intron | 35.0% | |
| TAGGTACATTATGAAACCAC+CGG | + | chr5.4:2132930-2132949 | MS.gene024871:intron | 35.0% | |
| TATTGAATTCGAACTTTCGG+TGG | - | chr5.4:2135291-2135310 | None:intergenic | 35.0% | |
| TGATTATGTGCTTGTTTGGT+TGG | + | chr5.4:2132353-2132372 | MS.gene024871:intron | 35.0% | |
| TGGAAGAGGATCTGATTAAA+GGG | + | chr5.4:2133340-2133359 | MS.gene024871:intron | 35.0% | |
| TGTCTACAGTTTGATAAGGT+GGG | + | chr5.4:2133910-2133929 | MS.gene024871:intron | 35.0% | |
| TGTTGAAGTATGTAGGCATT+GGG | - | chr5.4:2132816-2132835 | None:intergenic | 35.0% | |
| TTCGTGATTATGTGCTTGTT+TGG | + | chr5.4:2132349-2132368 | MS.gene024871:intron | 35.0% | |
| TTGTCTACAGTTTGATAAGG+TGG | + | chr5.4:2133909-2133928 | MS.gene024871:intron | 35.0% | |
| TTGTTGAAGTATGTAGGCAT+TGG | - | chr5.4:2132817-2132836 | None:intergenic | 35.0% | |
| TTTAAGAGCAAGAAGCTTTG+CGG | - | chr5.4:2134349-2134368 | None:intergenic | 35.0% | |
| TTTGGCTATCTTAATTGCAG+CGG | - | chr5.4:2134597-2134616 | None:intergenic | 35.0% | |
| ! | ATAAGCTTCCCAGAATTTTC+TGG | - | chr5.4:2134623-2134642 | None:intergenic | 35.0% |
| ! | GATAGAAATGTTAGTTTCCG+GGG | - | chr5.4:2134829-2134848 | None:intergenic | 35.0% |
| ! | GATTAGTCAAAGGATCAGTT+AGG | - | chr5.4:2133666-2133685 | None:intergenic | 35.0% |
| ! | GGTGTCGAGAAAAATTTACA+AGG | - | chr5.4:2133626-2133645 | None:intergenic | 35.0% |
| ! | TAAGGGACATTCAAGGATTT+TGG | + | chr5.4:2134784-2134803 | MS.gene024871:intron | 35.0% |
| ! | TATATACCTTAGGATTGGCA+GGG | - | chr5.4:2132848-2132867 | None:intergenic | 35.0% |
| ! | TTATATACCTTAGGATTGGC+AGG | - | chr5.4:2132849-2132868 | None:intergenic | 35.0% |
| ! | TTTAAGATATTTCCCAGCAC+CGG | - | chr5.4:2133030-2133049 | None:intergenic | 35.0% |
| !! | AAGTTTTGTGTTCCTTGATG+CGG | + | chr5.4:2132058-2132077 | MS.gene024871:intron | 35.0% |
| !! | ACTCTTAGCTGTTTCTACAT+AGG | - | chr5.4:2134396-2134415 | None:intergenic | 35.0% |
| !! | AGATTAACTTCTAAGACACC+AGG | - | chr5.4:2133756-2133775 | None:intergenic | 35.0% |
| !! | CCAGCTTATAGCTTTTTCTA+TGG | - | chr5.4:2133513-2133532 | None:intergenic | 35.0% |
| !! | GATTAACTTCTAAGACACCA+GGG | - | chr5.4:2133755-2133774 | None:intergenic | 35.0% |
| !!! | ATTAGCTTTTGGAGCTGAAT+TGG | + | chr5.4:2132722-2132741 | MS.gene024871:CDS | 35.0% |
| !!! | CAAAAGTGCTTTTAAGAGCA+AGG | - | chr5.4:2134160-2134179 | None:intergenic | 35.0% |
| AAAGTTATACCAACCTGTCC+AGG | - | chr5.4:2132454-2132473 | None:intergenic | 40.0% | |
| AACTGGAAATGGCCAATAAG+TGG | - | chr5.4:2134034-2134053 | None:intergenic | 40.0% | |
| AAGGGTTCTCAAACTGGAAA+TGG | - | chr5.4:2134045-2134064 | None:intergenic | 40.0% | |
| ACTCAAATAGCACAGAGGAT+AGG | - | chr5.4:2135563-2135582 | None:intergenic | 40.0% | |
| AGCTTGAAGTTGTTGGATCA+AGG | - | chr5.4:2135234-2135253 | None:intergenic | 40.0% | |
| AGGACATCCGAATTCATTGA+TGG | - | chr5.4:2135102-2135121 | None:intergenic | 40.0% | |
| AGTCAAGAGCTTGAAGTTGT+TGG | - | chr5.4:2135241-2135260 | None:intergenic | 40.0% | |
| ATAAGCTGGAAAGACTGTGT+TGG | + | chr5.4:2133524-2133543 | MS.gene024871:intron | 40.0% | |
| ATTGCTGATGCAGAAGAGAA+GGG | + | chr5.4:2132418-2132437 | MS.gene024871:CDS | 40.0% | |
| CAATAAAGAAATGCTGCAGG+TGG | + | chr5.4:2135306-2135325 | MS.gene024871:intron | 40.0% | |
| CATGCTCTAGTGTAAAAGAC+AGG | + | chr5.4:2132240-2132259 | MS.gene024871:CDS | 40.0% | |
| CCAAAAGGCCAGAAAATTCT+GGG | + | chr5.4:2134612-2134631 | MS.gene024871:CDS | 40.0% | |
| CTTTATGTAGCTGATTGGTG+TGG | + | chr5.4:2133181-2133200 | MS.gene024871:intron | 40.0% | |
| CTTTCAAGACTCATTGAAGC+AGG | - | chr5.4:2132690-2132709 | None:intergenic | 40.0% | |
| CTTTCAATATTTGGACAGGC+AGG | - | chr5.4:2133557-2133576 | None:intergenic | 40.0% | |
| GGAAGAGGATCTGATTAAAG+GGG | + | chr5.4:2133341-2133360 | MS.gene024871:intron | 40.0% | |
| TAAGCTGGAAAGACTGTGTT+GGG | + | chr5.4:2133525-2133544 | MS.gene024871:intron | 40.0% | |
| TAGGTCAACCGATCATGAAA+TGG | - | chr5.4:2133647-2133666 | None:intergenic | 40.0% | |
| TCAAAAAGCTGAAGAGCTGT+TGG | + | chr5.4:2132782-2132801 | MS.gene024871:CDS | 40.0% | |
| TCCTACTCGAAACTTTCCTA+GGG | - | chr5.4:2134119-2134138 | None:intergenic | 40.0% | |
| TCTCGACACCATTTCATGAT+CGG | + | chr5.4:2133636-2133655 | MS.gene024871:intron | 40.0% | |
| TGCTGCAAAACTGGAATTGA+TGG | + | chr5.4:2132214-2132233 | MS.gene024871:CDS | 40.0% | |
| TTAGCCAGTTCTTAAGCTAC+AGG | - | chr5.4:2135394-2135413 | None:intergenic | 40.0% | |
| TTGTAGGTGGGAATATCTTC+TGG | + | chr5.4:2134560-2134579 | MS.gene024871:intron | 40.0% | |
| TTTAAGAGCAAGGAGCAAAC+TGG | - | chr5.4:2134150-2134169 | None:intergenic | 40.0% | |
| ! | AAGGATCGGTGATTAGTCAA+AGG | - | chr5.4:2133676-2133695 | None:intergenic | 40.0% |
| ! | ATCTAATCGGTTCCATTAGC+GGG | - | chr5.4:2135353-2135372 | None:intergenic | 40.0% |
| ! | ATTCCAGTTTTGCAGCAACT+CGG | - | chr5.4:2132211-2132230 | None:intergenic | 40.0% |
| ! | CATCTAATCGGTTCCATTAG+CGG | - | chr5.4:2135354-2135373 | None:intergenic | 40.0% |
| ! | CTGTCTTTTACACTAGAGCA+TGG | - | chr5.4:2132242-2132261 | None:intergenic | 40.0% |
| ! | TGCTATTTGAGTCAGTGAGA+CGG | + | chr5.4:2135571-2135590 | MS.gene024871:CDS | 40.0% |
| !! | ACATTCAAGGATTTTGGAGG+AGG | + | chr5.4:2134790-2134809 | MS.gene024871:intron | 40.0% |
| !! | ACTTCTCTGAAATTGGGTCA+TGG | + | chr5.4:2133462-2133481 | MS.gene024871:intron | 40.0% |
| !! | TACCACTTGTTGGTTCAATG+AGG | - | chr5.4:2132605-2132624 | None:intergenic | 40.0% |
| !! | TGGTTGGTAATGTGATCTGA+GGG | + | chr5.4:2134465-2134484 | MS.gene024871:intron | 40.0% |
| !! | TTGGTTGGTAATGTGATCTG+AGG | + | chr5.4:2134464-2134483 | MS.gene024871:intron | 40.0% |
| !! | TTTGTTTCTGGGATAGGTAC+TGG | + | chr5.4:2132993-2133012 | MS.gene024871:CDS | 40.0% |
| AAGAAATGCTGCAGGTGGTA+TGG | + | chr5.4:2135311-2135330 | MS.gene024871:intron | 45.0% | |
| ACAAGTGGTAACACTGGCAT+TGG | + | chr5.4:2132615-2132634 | MS.gene024871:CDS | 45.0% | |
| ATGCCAGTGTTACCACTTGT+TGG | - | chr5.4:2132615-2132634 | None:intergenic | 45.0% | |
| ATTCCACATAGTTGGCAGCT+TGG | + | chr5.4:2135132-2135151 | MS.gene024871:intron | 45.0% | |
| CAACTATGTGGAATCTCAGG+CGG | - | chr5.4:2135126-2135145 | None:intergenic | 45.0% | |
| CAGGTCCTCACAAGATTCAA+GGG | + | chr5.4:2133712-2133731 | MS.gene024871:intron | 45.0% | |
| CATTCACAGCAGCAAAGGAT+CGG | - | chr5.4:2133690-2133709 | None:intergenic | 45.0% | |
| CCAATCCCTTGAATCTTGTG+AGG | - | chr5.4:2133720-2133739 | None:intergenic | 45.0% | |
| CCTCACAAGATTCAAGGGAT+TGG | + | chr5.4:2133717-2133736 | MS.gene024871:CDS | 45.0% | |
| CTATGCTTATCCTCTTCCCT+AGG | + | chr5.4:2134100-2134119 | MS.gene024871:intron | 45.0% | |
| CTCCTACTCGAAACTTTCCT+AGG | - | chr5.4:2134120-2134139 | None:intergenic | 45.0% | |
| CTCCTTTCATTCCCTTTGCA+GGG | - | chr5.4:2132758-2132777 | None:intergenic | 45.0% | |
| CTGAACATTCACAGCAGCAA+AGG | - | chr5.4:2133695-2133714 | None:intergenic | 45.0% | |
| CTTTGCTGCTGTGAATGTTC+AGG | + | chr5.4:2133693-2133712 | MS.gene024871:intron | 45.0% | |
| GAACCAACAAGTGGTAACAC+TGG | + | chr5.4:2132609-2132628 | MS.gene024871:CDS | 45.0% | |
| GATTGCTGATGCAGAAGAGA+AGG | + | chr5.4:2132417-2132436 | MS.gene024871:CDS | 45.0% | |
| GCCAAAAGGCCAGAAAATTC+TGG | + | chr5.4:2134611-2134630 | MS.gene024871:CDS | 45.0% | |
| GCTATTTGAGTCAGTGAGAC+GGG | + | chr5.4:2135572-2135591 | MS.gene024871:CDS | 45.0% | |
| GTACCTTAAGAACCCGCTAA+TGG | + | chr5.4:2135338-2135357 | MS.gene024871:intron | 45.0% | |
| GTCCTCATTGAACCAACAAG+TGG | + | chr5.4:2132600-2132619 | MS.gene024871:CDS | 45.0% | |
| TCAGGTCCTCACAAGATTCA+AGG | + | chr5.4:2133711-2133730 | MS.gene024871:intron | 45.0% | |
| TCCAGAGATATGGAAAGGCA+CGG | + | chr5.4:2132953-2132972 | MS.gene024871:CDS | 45.0% | |
| TCGAAACTTTCCTAGGGAAG+AGG | - | chr5.4:2134113-2134132 | None:intergenic | 45.0% | |
| TGAAAACCCTGCCAATCCTA+AGG | + | chr5.4:2132839-2132858 | MS.gene024871:CDS | 45.0% | |
| TGCCAACTATGTGGAATCTC+AGG | - | chr5.4:2135129-2135148 | None:intergenic | 45.0% | |
| TGGTCCTGTAGCTTAAGAAC+TGG | + | chr5.4:2135387-2135406 | MS.gene024871:intron | 45.0% | |
| TTGCTGATGCAGAAGAGAAG+GGG | + | chr5.4:2132419-2132438 | MS.gene024871:CDS | 45.0% | |
| ! | AAGATTCAAGGGATTGGTGC+TGG | + | chr5.4:2133723-2133742 | MS.gene024871:CDS | 45.0% |
| ! | AGATATGGAAAGGCACGGAT+GGG | + | chr5.4:2132958-2132977 | MS.gene024871:CDS | 45.0% |
| ! | GGGACATTCAAGGATTTTGG+AGG | + | chr5.4:2134787-2134806 | MS.gene024871:intron | 45.0% |
| ! | TAGGTAGCTTGGTGAGCTAA+GGG | + | chr5.4:2134767-2134786 | MS.gene024871:intron | 45.0% |
| ! | TCCCTAGGAAAGTTTCGAGT+AGG | + | chr5.4:2134115-2134134 | MS.gene024871:intron | 45.0% |
| ! | TTCCAGTTTTGCAGCAACTC+GGG | - | chr5.4:2132210-2132229 | None:intergenic | 45.0% |
| !! | ATATTTCCCAGCACCGGTTA+TGG | - | chr5.4:2133024-2133043 | None:intergenic | 45.0% |
| !! | CACTGACTCAAATAGCACAG+AGG | - | chr5.4:2135568-2135587 | None:intergenic | 45.0% |
| !! | CCCAGAATTTTCTGGCCTTT+TGG | - | chr5.4:2134615-2134634 | None:intergenic | 45.0% |
| !! | GACGCATTTGTTTCTGGGAT+AGG | + | chr5.4:2132987-2133006 | MS.gene024871:CDS | 45.0% |
| !! | GGTTGGTAATGTGATCTGAG+GGG | + | chr5.4:2134466-2134485 | MS.gene024871:intron | 45.0% |
| !! | GTTCCATTAGCGGGTTCTTA+AGG | - | chr5.4:2135344-2135363 | None:intergenic | 45.0% |
| !! | GTTCCATTTTGACATGGTGC+AGG | + | chr5.4:2135509-2135528 | MS.gene024871:intron | 45.0% |
| !! | GTTTTGACAGACCCTGCAAA+GGG | + | chr5.4:2132744-2132763 | MS.gene024871:CDS | 45.0% |
| !! | TGGCATTGGATTAGCCTTCA+TGG | + | chr5.4:2132629-2132648 | MS.gene024871:CDS | 45.0% |
| !! | TTTTTCCAAGCTTTGGCGAG+AGG | + | chr5.4:2135535-2135554 | MS.gene024871:CDS | 45.0% |
| !!! | CAGGTCGTTTTTCCAAGCTT+TGG | + | chr5.4:2135528-2135547 | MS.gene024871:intron | 45.0% |
| !!! | TTAGTTAATTTTTTTTTAAT+AGG | - | chr5.4:2134864-2134883 | None:intergenic | 5.0% |
| AAACCACCGGTCCAGAGATA+TGG | + | chr5.4:2132943-2132962 | MS.gene024871:CDS | 50.0% | |
| ACCGGTCCAGAGATATGGAA+AGG | + | chr5.4:2132948-2132967 | MS.gene024871:CDS | 50.0% | |
| AGTTTCCGGGGATGAAACCT+GGG | - | chr5.4:2134817-2134836 | None:intergenic | 50.0% | |
| ATGAAGAGCTAGTCCCACGT+AGG | + | chr5.4:2134748-2134767 | MS.gene024871:intron | 50.0% | |
| ATTTGAGTCAGTGAGACGGG+AGG | + | chr5.4:2135575-2135594 | MS.gene024871:CDS | 50.0% | |
| CGACCTGCACCATGTCAAAA+TGG | - | chr5.4:2135515-2135534 | None:intergenic | 50.0% | |
| CGATCGGAAAATCCGCATCA+AGG | - | chr5.4:2132073-2132092 | None:intergenic | 50.0% | |
| CGCCTGAGATTCCACATAGT+TGG | + | chr5.4:2135124-2135143 | MS.gene024871:intron | 50.0% | |
| CTTATCACACCTGGACAGGT+TGG | + | chr5.4:2132442-2132461 | MS.gene024871:intron | 50.0% | |
| GACCCTGCAAAGGGAATGAA+AGG | + | chr5.4:2132753-2132772 | MS.gene024871:CDS | 50.0% | |
| GCCTTTCCATATCTCTGGAC+CGG | - | chr5.4:2132952-2132971 | None:intergenic | 50.0% | |
| GCTCCTTTCATTCCCTTTGC+AGG | - | chr5.4:2132759-2132778 | None:intergenic | 50.0% | |
| GGATCTGATTAAAGGGGCAG+AGG | + | chr5.4:2133347-2133366 | MS.gene024871:intron | 50.0% | |
| GGTGAGCTAAGGGACATTCA+AGG | + | chr5.4:2134777-2134796 | MS.gene024871:intron | 50.0% | |
| TAGTTTCCGGGGATGAAACC+TGG | - | chr5.4:2134818-2134837 | None:intergenic | 50.0% | |
| TATGTGGAATCTCAGGCGGT+AGG | - | chr5.4:2135122-2135141 | None:intergenic | 50.0% | |
| TCCGTGCCTTTCCATATCTC+TGG | - | chr5.4:2132957-2132976 | None:intergenic | 50.0% | |
| TTTCCATATCTCTGGACCGG+TGG | - | chr5.4:2132949-2132968 | None:intergenic | 50.0% | |
| ! | GAGATATGGAAAGGCACGGA+TGG | + | chr5.4:2132957-2132976 | MS.gene024871:CDS | 50.0% |
| ! | GTAGGTAGCTTGGTGAGCTA+AGG | + | chr5.4:2134766-2134785 | MS.gene024871:intron | 50.0% |
| !! | GGTACTGGTGGTACCATAAC+CGG | + | chr5.4:2133008-2133027 | MS.gene024871:CDS | 50.0% |
| !! | GGTTTTGACAGACCCTGCAA+AGG | + | chr5.4:2132743-2132762 | MS.gene024871:CDS | 50.0% |
| !! | GTTTCTGGGATAGGTACTGG+TGG | + | chr5.4:2132996-2133015 | MS.gene024871:CDS | 50.0% |
| AGCTCACCAAGCTACCTACG+TGG | - | chr5.4:2134765-2134784 | None:intergenic | 55.0% | |
| AGGTACCTCTCGCCAAAGCT+TGG | - | chr5.4:2135543-2135562 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTGGAGCTGT+TGG | + | chr5.4:2135141-2135160 | MS.gene024871:intron | 55.0% | |
| CTAGTCCCACGTAGGTAGCT+TGG | + | chr5.4:2134756-2134775 | MS.gene024871:intron | 55.0% | |
| GAGAAGGGGCTTATCACACC+TGG | + | chr5.4:2132433-2132452 | MS.gene024871:CDS | 55.0% | |
| GCTCACCAAGCTACCTACGT+GGG | - | chr5.4:2134764-2134783 | None:intergenic | 55.0% | |
| GCTCCAAGCTGCCAACTATG+TGG | - | chr5.4:2135138-2135157 | None:intergenic | 55.0% | |
| GCTGATTGGTGTGGAACCAG+TGG | + | chr5.4:2133190-2133209 | MS.gene024871:intron | 55.0% | |
| GTGGTACCATAACCGGTGCT+GGG | + | chr5.4:2133015-2133034 | MS.gene024871:CDS | 55.0% | |
| TGCCCGAGTTGCTGCAAAAC+TGG | + | chr5.4:2132205-2132224 | MS.gene024871:CDS | 55.0% | |
| TGGAGAGTCCAGTGCTCTCA+GGG | + | chr5.4:2133210-2133229 | MS.gene024871:CDS | 55.0% | |
| !! | AGGATTTTGGAGGAGGTCCC+AGG | + | chr5.4:2134797-2134816 | MS.gene024871:intron | 55.0% |
| !! | ATTGGTGCTGGCTTTGTCCC+TGG | + | chr5.4:2133735-2133754 | MS.gene024871:CDS | 55.0% |
| AGCCTTCATGGCAGCAGCCA+AGG | + | chr5.4:2132641-2132660 | MS.gene024871:CDS | 60.0% | |
| GAGAGTCCAGTGCTCTCAGG+GGG | + | chr5.4:2133212-2133231 | MS.gene024871:CDS | 60.0% | |
| GAGGTCCCAGGTTTCATCCC+CGG | + | chr5.4:2134809-2134828 | MS.gene024871:intron | 60.0% | |
| GCCTTCATGGCAGCAGCCAA+GGG | + | chr5.4:2132642-2132661 | MS.gene024871:CDS | 60.0% | |
| GGAGAGTCCAGTGCTCTCAG+GGG | + | chr5.4:2133211-2133230 | MS.gene024871:CDS | 60.0% | |
| GGGGCTTATCACACCTGGAC+AGG | + | chr5.4:2132438-2132457 | MS.gene024871:CDS | 60.0% | |
| GGTGGTACCATAACCGGTGC+TGG | + | chr5.4:2133014-2133033 | MS.gene024871:CDS | 60.0% | |
| GTGCTCTCAGGGGGAAAACC+TGG | + | chr5.4:2133221-2133240 | MS.gene024871:CDS | 60.0% | |
| GTGGAGAGTCCAGTGCTCTC+AGG | + | chr5.4:2133209-2133228 | MS.gene024871:CDS | 60.0% | |
| TCCCTTGGCTGCTGCCATGA+AGG | - | chr5.4:2132646-2132665 | None:intergenic | 60.0% | |
| !! | GAGAGCACTGGACTCTCCAC+TGG | - | chr5.4:2133209-2133228 | None:intergenic | 60.0% |
| !! | GGTTTTCCCCCTGAGAGCAC+TGG | - | chr5.4:2133221-2133240 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 2132014 | 2135623 | 2132014 | ID=MS.gene024871 |
| chr5.4 | mRNA | 2132014 | 2135623 | 2132014 | ID=MS.gene024871.t1;Parent=MS.gene024871 |
| chr5.4 | exon | 2132014 | 2132055 | 2132014 | ID=MS.gene024871.t1.exon1;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2132014 | 2132055 | 2132014 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2132152 | 2132261 | 2132152 | ID=MS.gene024871.t1.exon2;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2132152 | 2132261 | 2132152 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2132402 | 2132459 | 2132402 | ID=MS.gene024871.t1.exon3;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2132402 | 2132459 | 2132402 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2132597 | 2132860 | 2132597 | ID=MS.gene024871.t1.exon4;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2132597 | 2132860 | 2132597 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2132933 | 2133070 | 2132933 | ID=MS.gene024871.t1.exon5;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2132933 | 2133070 | 2132933 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2133191 | 2133242 | 2133191 | ID=MS.gene024871.t1.exon6;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2133191 | 2133242 | 2133191 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2133715 | 2133794 | 2133715 | ID=MS.gene024871.t1.exon7;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2133715 | 2133794 | 2133715 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2134321 | 2134380 | 2134321 | ID=MS.gene024871.t1.exon8;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2134321 | 2134380 | 2134321 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2134566 | 2134646 | 2134566 | ID=MS.gene024871.t1.exon9;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2134566 | 2134646 | 2134566 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| chr5.4 | exon | 2135531 | 2135623 | 2135531 | ID=MS.gene024871.t1.exon10;Parent=MS.gene024871.t1 |
| chr5.4 | CDS | 2135531 | 2135623 | 2135531 | ID=cds.MS.gene024871.t1;Parent=MS.gene024871.t1 |
| Gene Sequence |
| Protein sequence |
