Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027622.t1 | AEX20346.1 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 4.50E-198 | 700.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027622.t1 | Q9ZTR1 | 91.8 | 342 | 19 | 2 | 3 | 344 | 2 | 334 | 5.6e-181 | 634.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027622.t1 | H2EIY6 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 3.3e-198 | 700.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014976 | MS.gene027622 | PPI |
| MS.gene027622 | MS.gene42624 | PPI |
| MS.gene32768 | MS.gene027622 | PPI |
| MS.gene027622 | MS.gene058418 | PPI |
| MS.gene051552 | MS.gene027622 | PPI |
| MS.gene027622 | MS.gene016160 | PPI |
| MS.gene42684 | MS.gene027622 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027622.t1 | MTR_5g034470 | 97.384 | 344 | 8 | 1 | 1 | 344 | 1 | 343 | 0.0 | 688 |
| MS.gene027622.t1 | MTR_5g034470 | 94.065 | 337 | 19 | 1 | 1 | 337 | 1 | 336 | 0.0 | 651 |
| MS.gene027622.t1 | MTR_8g063940 | 80.802 | 349 | 52 | 3 | 3 | 344 | 2 | 342 | 0.0 | 579 |
| MS.gene027622.t1 | MTR_3g091090 | 65.060 | 332 | 89 | 5 | 34 | 339 | 23 | 353 | 1.01e-148 | 423 |
| MS.gene027622.t1 | MTR_1g028360 | 66.337 | 303 | 87 | 4 | 50 | 339 | 57 | 357 | 1.77e-140 | 403 |
| MS.gene027622.t1 | MTR_3g078190 | 60.135 | 296 | 97 | 2 | 53 | 344 | 41 | 319 | 1.09e-134 | 386 |
| MS.gene027622.t1 | MTR_1g015300 | 33.577 | 274 | 163 | 10 | 34 | 297 | 11 | 275 | 9.93e-39 | 140 |
| MS.gene027622.t1 | MTR_5g006140 | 36.771 | 223 | 133 | 6 | 73 | 290 | 42 | 261 | 3.04e-38 | 139 |
| MS.gene027622.t1 | MTR_5g006140 | 37.264 | 212 | 126 | 5 | 73 | 279 | 42 | 251 | 5.34e-38 | 137 |
| MS.gene027622.t1 | MTR_3g104960 | 30.315 | 254 | 151 | 10 | 47 | 292 | 28 | 263 | 1.23e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027622.t1 | AT1G23820 | 79.580 | 333 | 65 | 2 | 12 | 344 | 5 | 334 | 0.0 | 554 |
| MS.gene027622.t1 | AT1G70310 | 79.104 | 335 | 62 | 3 | 14 | 344 | 10 | 340 | 0.0 | 543 |
| MS.gene027622.t1 | AT1G23820 | 79.926 | 269 | 52 | 1 | 12 | 280 | 49 | 315 | 2.24e-159 | 449 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 2.55e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 2.55e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 2.55e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 2.55e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 2.55e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 40 | 372 | 7.18e-148 | 422 |
| MS.gene027622.t1 | AT5G53120 | 59.557 | 361 | 92 | 5 | 34 | 341 | 23 | 382 | 7.12e-144 | 412 |
| MS.gene027622.t1 | AT5G19530 | 31.541 | 279 | 170 | 8 | 70 | 343 | 40 | 302 | 4.97e-40 | 144 |
| MS.gene027622.t1 | AT5G19530 | 31.541 | 279 | 170 | 8 | 70 | 343 | 47 | 309 | 5.63e-40 | 144 |
Find 74 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGGTTGAGGTTCTTT+TGG | 0.239220 | 5.2:-24381805 | None:intergenic |
| TCAAGGAAAATCTGATTATC+AGG | 0.273203 | 5.2:+24383359 | MS.gene027622:CDS |
| ATATGGCAAGGTTCTTGTTT+TGG | 0.280455 | 5.2:+24383491 | MS.gene027622:CDS |
| TCAAAACCTACTGCTATATC+AGG | 0.285866 | 5.2:-24385003 | None:intergenic |
| GGTTTATCTTCTGTTATTCC+TGG | 0.301003 | 5.2:+24381826 | MS.gene027622:CDS |
| TTCTTCTCTTTGCCTCTTCA+AGG | 0.305491 | 5.2:-24381734 | None:intergenic |
| CTCAATTCCACACCCCAAAA+AGG | 0.319229 | 5.2:+24383584 | MS.gene027622:CDS |
| TCAGGATGTTATGGTCTTCC+AGG | 0.350984 | 5.2:+24383377 | MS.gene027622:CDS |
| TTGGTCATTGGTGGAGGAGA+TGG | 0.355582 | 5.2:+24384309 | MS.gene027622:CDS |
| TTTAGAAGCAATTGCTCTCT+TGG | 0.357834 | 5.2:-24386488 | None:intergenic |
| ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 5.2:-24385171 | None:intergenic |
| ATCTGATTATCAGGATGTTA+TGG | 0.375563 | 5.2:+24383368 | MS.gene027622:CDS |
| TATCTTCTGTTATTCCTGGC+TGG | 0.386803 | 5.2:+24381830 | MS.gene027622:CDS |
| TGACAGAGCCTTTGAATACT+TGG | 0.386990 | 5.2:-24385455 | None:intergenic |
| TTGCTCAACTGAGGGGCCTT+CGG | 0.394265 | 5.2:+24386064 | MS.gene027622:CDS |
| GTGGATTCATCCGATCCTAT+TGG | 0.418890 | 5.2:+24385198 | MS.gene027622:CDS |
| ATAACAGAAGATAAACCATT+TGG | 0.430526 | 5.2:-24381820 | None:intergenic |
| GTACTCAGGCGGAAAGTATA+TGG | 0.432205 | 5.2:+24385391 | MS.gene027622:CDS |
| GTGGAAAAGATTCTGTTTCA+AGG | 0.447500 | 5.2:+24383342 | MS.gene027622:CDS |
| TTCGGTCGATTTCAAGCATC+CGG | 0.461644 | 5.2:+24386082 | MS.gene027622:CDS |
| TGGCTATCATTCTCATCAAT+AGG | 0.466884 | 5.2:-24386110 | None:intergenic |
| TCAGAGTTGTAAAATTTCAA+TGG | 0.468115 | 5.2:-24386146 | None:intergenic |
| TGAGTACACACAACACCTCC+TGG | 0.469052 | 5.2:-24385375 | None:intergenic |
| AAAACGAACCAGGCCACATT+GGG | 0.470461 | 5.2:-24381867 | None:intergenic |
| GTTGCAAGGGCTCTTCGTCC+AGG | 0.475620 | 5.2:+24385357 | MS.gene027622:CDS |
| TTTATGCTTTGCTCAACTGA+GGG | 0.479096 | 5.2:+24386056 | MS.gene027622:CDS |
| TCTTCTCTTTGCCTCTTCAA+GGG | 0.480585 | 5.2:-24381733 | None:intergenic |
| GAAGATAAACCATTTGGTTG+AGG | 0.481438 | 5.2:-24381814 | None:intergenic |
| CCAAAAGAACCTCAACCAAA+TGG | 0.482653 | 5.2:+24381805 | MS.gene027622:CDS |
| AACTTATGATGCAGTTATTG+TGG | 0.485527 | 5.2:+24385179 | MS.gene027622:CDS |
| GTCATTGGTGGAGGAGATGG+AGG | 0.490380 | 5.2:+24384312 | MS.gene027622:CDS |
| ATTGCTCTCTTGGCAAAAGA+TGG | 0.491734 | 5.2:-24386478 | None:intergenic |
| CCACGTGTGACACTTAATAT+CGG | 0.495007 | 5.2:+24385030 | MS.gene027622:CDS |
| TCAATGGTCTTCCTGCATGC+TGG | 0.497270 | 5.2:-24386130 | None:intergenic |
| AAGGCTCTGTCAACTATGCT+TGG | 0.497721 | 5.2:+24385466 | MS.gene027622:CDS |
| GAAATTAGCCCAATGTGGCC+TGG | 0.504538 | 5.2:+24381859 | MS.gene027622:CDS |
| TTCTCATCAATAGGATTCAC+CGG | 0.513261 | 5.2:-24386101 | None:intergenic |
| AGGGGAGGCTCACTCATTGA+AGG | 0.518756 | 5.2:+24383320 | MS.gene027622:intron |
| GCAAACAGAAAGCTGCTGAA+TGG | 0.526418 | 5.2:-24386456 | None:intergenic |
| GAAGATGAGTGATCATCTCT+TGG | 0.533026 | 5.2:-24383554 | None:intergenic |
| AGAACACACCTTGGGTATGT+AGG | 0.534999 | 5.2:-24385498 | None:intergenic |
| AGGAGATGGAGGAGTCCTGC+GGG | 0.539206 | 5.2:+24384323 | MS.gene027622:CDS |
| CTAATTTCAGAGAACCAGCC+AGG | 0.562845 | 5.2:-24381844 | None:intergenic |
| GGTCATTCAGCTCACAGAAA+GGG | 0.566371 | 5.2:+24383518 | MS.gene027622:CDS |
| GGGTCATTCAGCTCACAGAA+AGG | 0.568875 | 5.2:+24383517 | MS.gene027622:CDS |
| GAGAATGATAGCCAGCATGC+AGG | 0.575153 | 5.2:+24386119 | MS.gene027622:CDS |
| GTAGTCAGCAACATATGGCA+AGG | 0.575663 | 5.2:+24383479 | MS.gene027622:intron |
| CCTCTTCAAGGGAAAATCTG+TGG | 0.576006 | 5.2:-24381722 | None:intergenic |
| ATGAGTGATCATCTCTTGGT+AGG | 0.576912 | 5.2:-24383550 | None:intergenic |
| AAGGGAAAATCTGTGGACTC+AGG | 0.578610 | 5.2:-24381715 | None:intergenic |
| GAAAACGAACCAGGCCACAT+TGG | 0.582261 | 5.2:-24381868 | None:intergenic |
| GAGGAGATGGAGGAGTCCTG+CGG | 0.584086 | 5.2:+24384322 | MS.gene027622:CDS |
| GCTTCATATGCATATCATTG+AGG | 0.585111 | 5.2:+24385413 | MS.gene027622:CDS |
| AGGAGGTGTTGTGTGTACTC+AGG | 0.589734 | 5.2:+24385377 | MS.gene027622:CDS |
| CATTTGTGAAATAGACAAGA+TGG | 0.590675 | 5.2:+24384380 | MS.gene027622:CDS |
| CAAAACCTACTGCTATATCA+GGG | 0.592364 | 5.2:-24385002 | None:intergenic |
| AATTGTCGCCAAGTATTCAA+AGG | 0.594618 | 5.2:+24385447 | MS.gene027622:CDS |
| GGGTGTGGAATTGAGCAAAG+AGG | 0.598942 | 5.2:-24383576 | None:intergenic |
| TTATGCTTTGCTCAACTGAG+GGG | 0.601606 | 5.2:+24386057 | MS.gene027622:CDS |
| TGTCAACTATGCTTGGACCA+CGG | 0.611981 | 5.2:+24385473 | MS.gene027622:CDS |
| ATATATCATACCAATAGGAT+CGG | 0.614299 | 5.2:-24385208 | None:intergenic |
| GGAGGCTCACTCATTGAAGG+TGG | 0.624884 | 5.2:+24383323 | MS.gene027622:CDS |
| GTGACACTTAATATCGGCGA+TGG | 0.629074 | 5.2:+24385036 | MS.gene027622:CDS |
| AGGTGTTGTGTGTACTCAGG+CGG | 0.646480 | 5.2:+24385380 | MS.gene027622:CDS |
| ATCTGTGGACTCAGGAAGTG+TGG | 0.650713 | 5.2:-24381707 | None:intergenic |
| CCACGGTTCCTACATACCCA+AGG | 0.659865 | 5.2:+24385490 | MS.gene027622:CDS |
| GCAAGGGCTCTTCGTCCAGG+AGG | 0.667733 | 5.2:+24385360 | MS.gene027622:CDS |
| AATGGCGTGAAACTTCCCGC+AGG | 0.668044 | 5.2:-24384338 | None:intergenic |
| GGATGCTTGAAATCGACCGA+AGG | 0.670797 | 5.2:-24386080 | None:intergenic |
| GTTTCAGAGACACCGTTGTG+AGG | 0.681469 | 5.2:-24381778 | None:intergenic |
| CCGATATTAAGTGTCACACG+TGG | 0.687158 | 5.2:-24385030 | None:intergenic |
| TCTCTGAAATTAGCCCAATG+TGG | 0.705739 | 5.2:+24381854 | MS.gene027622:CDS |
| CCTTGGGTATGTAGGAACCG+TGG | 0.729877 | 5.2:-24385490 | None:intergenic |
| GAAGATCAACTACCTCACAA+CGG | 0.763149 | 5.2:+24381766 | MS.gene027622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATATATTTTTTTTA+AGG | + | chr5.2:24382183-24382202 | MS.gene027622:intron | 0.0% |
| !!! | ACTTTTATTTTTTAAAATCA+CGG | + | chr5.2:24382818-24382837 | MS.gene027622:intron | 10.0% |
| !!! | ATATATTTTTTTTAAGGTTT+TGG | + | chr5.2:24382189-24382208 | MS.gene027622:intron | 10.0% |
| !!! | GATATGATTATTTTTTATTA+TGG | + | chr5.2:24385993-24386012 | MS.gene027622:intron | 10.0% |
| !!! | TATATTTTTTTTAAGGTTTT+GGG | + | chr5.2:24382190-24382209 | MS.gene027622:intron | 10.0% |
| !!! | TTTTGATTATATGTAATATA+TGG | + | chr5.2:24382352-24382371 | MS.gene027622:intron | 10.0% |
| !! | ACATATACTAAATTATTAGA+GGG | - | chr5.2:24383627-24383646 | None:intergenic | 15.0% |
| !! | ATTATAATAATGACAAATCA+TGG | - | chr5.2:24383098-24383117 | None:intergenic | 15.0% |
| !! | TAAAGACCATAAAAATTATA+AGG | - | chr5.2:24385242-24385261 | None:intergenic | 15.0% |
| !! | TTATAATAATGACAAATCAT+GGG | - | chr5.2:24383097-24383116 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTAAGGTTTTG+GGG | + | chr5.2:24382191-24382210 | MS.gene027622:intron | 15.0% |
| !!! | ATTTTTTAGAATCTAAAACA+AGG | + | chr5.2:24386297-24386316 | MS.gene027622:intron | 15.0% |
| !!! | TATAATTTTTATGGTCTTTA+CGG | + | chr5.2:24385242-24385261 | MS.gene027622:intron | 15.0% |
| !!! | TTTATTTTTTGATGAAACTT+AGG | + | chr5.2:24381972-24381991 | MS.gene027622:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTTCAGT+GGG | + | chr5.2:24386024-24386043 | MS.gene027622:intron | 15.0% |
| !!! | TTTTAATCATTATATGTAGA+TGG | + | chr5.2:24383730-24383749 | MS.gene027622:intron | 15.0% |
| !!! | TTTTATTTTTTTTGTTTCAG+TGG | + | chr5.2:24386023-24386042 | MS.gene027622:intron | 15.0% |
| !!! | TTTTTTAGAATCTAAAACAA+GGG | + | chr5.2:24386298-24386317 | MS.gene027622:intron | 15.0% |
| !! | AAAAATGGAGAGTTAATATT+TGG | - | chr5.2:24386419-24386438 | None:intergenic | 20.0% |
| !! | AATTCAGGATAATAATTGTA+AGG | + | chr5.2:24383696-24383715 | MS.gene027622:intron | 20.0% |
| !! | ACTTAAACGTAAATAATCTA+CGG | - | chr5.2:24383891-24383910 | None:intergenic | 20.0% |
| !! | ATTAACAACATTGTAATATG+TGG | - | chr5.2:24385585-24385604 | None:intergenic | 20.0% |
| !! | CAAGTAAAAACAATAACAAA+TGG | - | chr5.2:24382636-24382655 | None:intergenic | 20.0% |
| !! | GACATATACTAAATTATTAG+AGG | - | chr5.2:24383628-24383647 | None:intergenic | 20.0% |
| !! | GTGAAAATAAATTTGAGAAA+CGG | - | chr5.2:24382593-24382612 | None:intergenic | 20.0% |
| !! | TTATGCTGATAAATGAATAA+GGG | - | chr5.2:24381942-24381961 | None:intergenic | 20.0% |
| !! | TTTATGCTGATAAATGAATA+AGG | - | chr5.2:24381943-24381962 | None:intergenic | 20.0% |
| !!! | AAAGTATCAAATACCTTTTT+GGG | - | chr5.2:24383600-24383619 | None:intergenic | 20.0% |
| !!! | AAATATTAACTCTCCATTTT+TGG | + | chr5.2:24386418-24386437 | MS.gene027622:intron | 20.0% |
| !!! | AATAAGCTAAAAACAGTTTT+TGG | + | chr5.2:24384670-24384689 | MS.gene027622:intron | 20.0% |
| !!! | CAAAATTTTGACTAAAATTC+TGG | + | chr5.2:24382453-24382472 | MS.gene027622:intron | 20.0% |
| !!! | TATTGTTTTTACTTGCATAT+TGG | + | chr5.2:24382641-24382660 | MS.gene027622:intron | 20.0% |
| !!! | TGTTGTTAATTTTAAGATTG+CGG | + | chr5.2:24385595-24385614 | MS.gene027622:intron | 20.0% |
| !!! | TTGATTATGATTGTGTTTTT+AGG | + | chr5.2:24382129-24382148 | MS.gene027622:intron | 20.0% |
| !!! | TTGTTTTTTTGTTGTTTGTT+GGG | + | chr5.2:24382003-24382022 | MS.gene027622:intron | 20.0% |
| !!! | TTTTATAATTGATTGTTAGC+TGG | + | chr5.2:24382040-24382059 | MS.gene027622:intron | 20.0% |
| !!! | TTTTGAGAAAATGAACAAAA+GGG | - | chr5.2:24381902-24381921 | None:intergenic | 20.0% |
| !!! | TTTTTGAGAAAATGAACAAA+AGG | - | chr5.2:24381903-24381922 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCCTTCAAGTT+GGG | + | chr5.2:24384818-24384837 | MS.gene027622:intron | 20.0% |
| !!! | TTTTTTTTTTTCCTTCAAGT+TGG | + | chr5.2:24384817-24384836 | MS.gene027622:intron | 20.0% |
| ! | AAAAAAAACACAGCAATAAG+CGG | - | chr5.2:24384863-24384882 | None:intergenic | 25.0% |
| ! | AAAACATAAACCATACCAAA+TGG | - | chr5.2:24383142-24383161 | None:intergenic | 25.0% |
| ! | AACCATTATGTATTACTGTT+AGG | - | chr5.2:24386277-24386296 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAAAAAAGCGA+GGG | - | chr5.2:24384812-24384831 | None:intergenic | 25.0% |
| ! | AATGTCTATATTGAATCTCT+TGG | + | chr5.2:24383777-24383796 | MS.gene027622:intron | 25.0% |
| ! | ACCATTATGTATTACTGTTA+GGG | - | chr5.2:24386276-24386295 | None:intergenic | 25.0% |
| ! | AGAAACATTGAATCTCATAT+TGG | + | chr5.2:24382726-24382745 | MS.gene027622:intron | 25.0% |
| ! | ATAACAGAAGATAAACCATT+TGG | - | chr5.2:24381823-24381842 | None:intergenic | 25.0% |
| ! | ATAAGACGCTTACAATATAA+GGG | + | chr5.2:24384547-24384566 | MS.gene027622:intron | 25.0% |
| ! | ATATATCATACCAATAGGAT+CGG | - | chr5.2:24385211-24385230 | None:intergenic | 25.0% |
| ! | CTGAAATAAAGAACCAAAAA+TGG | - | chr5.2:24386434-24386453 | None:intergenic | 25.0% |
| ! | GTAGATAGTAGAAATTTGAT+TGG | + | chr5.2:24382525-24382544 | MS.gene027622:intron | 25.0% |
| ! | GTAGATTATTTACGTTTAAG+TGG | + | chr5.2:24383890-24383909 | MS.gene027622:intron | 25.0% |
| ! | TAAGAACATGTGATTAATGA+TGG | - | chr5.2:24382886-24382905 | None:intergenic | 25.0% |
| ! | TACTTGCATATTGGATTTAA+TGG | + | chr5.2:24382650-24382669 | MS.gene027622:intron | 25.0% |
| ! | TAGCAGTACTATTGTAATAT+AGG | - | chr5.2:24382428-24382447 | None:intergenic | 25.0% |
| ! | TAGTTTGGCAAAAAAAATTC+AGG | + | chr5.2:24383681-24383700 | MS.gene027622:intron | 25.0% |
| ! | TATAAGACGCTTACAATATA+AGG | + | chr5.2:24384546-24384565 | MS.gene027622:intron | 25.0% |
| ! | TATATCAGGGAAAAATTGTT+TGG | - | chr5.2:24384992-24385011 | None:intergenic | 25.0% |
| ! | TCAGAGTTGTAAAATTTCAA+TGG | - | chr5.2:24386149-24386168 | None:intergenic | 25.0% |
| ! | TCCCTAAATTCAAGAAAAAA+GGG | - | chr5.2:24382224-24382243 | None:intergenic | 25.0% |
| ! | TTCAGATATATCATACCAAT+AGG | - | chr5.2:24385216-24385235 | None:intergenic | 25.0% |
| ! | TTCCCTAAATTCAAGAAAAA+AGG | - | chr5.2:24382225-24382244 | None:intergenic | 25.0% |
| ! | TTTCTAATAAGACTTTGCTT+TGG | - | chr5.2:24383246-24383265 | None:intergenic | 25.0% |
| !! | AAGTATCAAATACCTTTTTG+GGG | - | chr5.2:24383599-24383618 | None:intergenic | 25.0% |
| !! | ATTAATTTTGCTCTTCAAGA+TGG | + | chr5.2:24382285-24382304 | MS.gene027622:intron | 25.0% |
| !! | ATTGAAATTTTACAACTCTG+AGG | + | chr5.2:24386148-24386167 | MS.gene027622:CDS | 25.0% |
| !! | ATTGACTTTCTTATGTAGTT+TGG | + | chr5.2:24383666-24383685 | MS.gene027622:intron | 25.0% |
| !! | ATTTGGTATGGTTTATGTTT+TGG | + | chr5.2:24383141-24383160 | MS.gene027622:intron | 25.0% |
| !! | ATTTTCATCAATCAAGGATT+TGG | + | chr5.2:24382379-24382398 | MS.gene027622:intron | 25.0% |
| !! | CTTTGCACAAAATAGATTTT+AGG | - | chr5.2:24384901-24384920 | None:intergenic | 25.0% |
| !! | GAAACGCCTTATAATTTTTA+TGG | + | chr5.2:24385233-24385252 | MS.gene027622:intron | 25.0% |
| !! | TATAACATGCTTTTCGATTA+GGG | + | chr5.2:24385971-24385990 | MS.gene027622:intron | 25.0% |
| !! | TTCTATTTTCTGTTAGGTTT+TGG | + | chr5.2:24384290-24384309 | MS.gene027622:intron | 25.0% |
| !! | TTTTCATCAATCAAGGATTT+GGG | + | chr5.2:24382380-24382399 | MS.gene027622:intron | 25.0% |
| !!! | CAAAGTATCAAATACCTTTT+TGG | - | chr5.2:24383601-24383620 | None:intergenic | 25.0% |
| !!! | CAAGATTTTGGTTTTCTTTA+AGG | + | chr5.2:24383203-24383222 | MS.gene027622:intron | 25.0% |
| !!! | GTTGTTTTTTTGTTGTTTGT+TGG | + | chr5.2:24382002-24382021 | MS.gene027622:intron | 25.0% |
| AAACAGAACTAGTACTATGA+AGG | - | chr5.2:24383439-24383458 | None:intergenic | 30.0% | |
| AAACTATTTGCAAGAGTTCA+CGG | - | chr5.2:24384714-24384733 | None:intergenic | 30.0% | |
| AACAGAACTAGTACTATGAA+GGG | - | chr5.2:24383438-24383457 | None:intergenic | 30.0% | |
| AACTTATGATGCAGTTATTG+TGG | + | chr5.2:24385179-24385198 | MS.gene027622:CDS | 30.0% | |
| AATGGAGAGTTAATATTTGG+AGG | - | chr5.2:24386416-24386435 | None:intergenic | 30.0% | |
| ACCCTAACAGTAATACATAA+TGG | + | chr5.2:24386272-24386291 | MS.gene027622:intron | 30.0% | |
| ACTATGCTTAAACACTTAAG+TGG | + | chr5.2:24385726-24385745 | MS.gene027622:intron | 30.0% | |
| AGGAAAAAAAAAAAAGCGAG+GGG | - | chr5.2:24384811-24384830 | None:intergenic | 30.0% | |
| AGTGAAGTGATTAAGAAACA+TGG | - | chr5.2:24385081-24385100 | None:intergenic | 30.0% | |
| ATATAAAACAAGTGTGTAGC+AGG | - | chr5.2:24383842-24383861 | None:intergenic | 30.0% | |
| ATCTGATTATCAGGATGTTA+TGG | + | chr5.2:24383368-24383387 | MS.gene027622:CDS | 30.0% | |
| CAACATTGTAATATGTGGAA+AGG | - | chr5.2:24385580-24385599 | None:intergenic | 30.0% | |
| CATTTGTGAAATAGACAAGA+TGG | + | chr5.2:24384380-24384399 | MS.gene027622:CDS | 30.0% | |
| CTTAATCACTTCACTGTTTA+GGG | + | chr5.2:24385086-24385105 | MS.gene027622:intron | 30.0% | |
| CTTATTCTCATAAATTCTCC+AGG | - | chr5.2:24384656-24384675 | None:intergenic | 30.0% | |
| GAAGGAAAAAAAAAAAAGCG+AGG | - | chr5.2:24384813-24384832 | None:intergenic | 30.0% | |
| GAATACATAACCAACACAAT+TGG | - | chr5.2:24385923-24385942 | None:intergenic | 30.0% | |
| GACATACTATCATCTTACTT+GGG | + | chr5.2:24384470-24384489 | MS.gene027622:intron | 30.0% | |
| GCATATGACTTTATGAGATA+TGG | + | chr5.2:24384153-24384172 | MS.gene027622:intron | 30.0% | |
| GTTAATATTTGGAGGAGAAA+AGG | - | chr5.2:24386408-24386427 | None:intergenic | 30.0% | |
| GTTTCAAATCAACTATCTAG+TGG | - | chr5.2:24385814-24385833 | None:intergenic | 30.0% | |
| TATTATATGTCGAAGAGAGT+AGG | + | chr5.2:24384127-24384146 | MS.gene027622:intron | 30.0% | |
| TCAAGGAAAATCTGATTATC+AGG | + | chr5.2:24383359-24383378 | MS.gene027622:CDS | 30.0% | |
| TCAATCATCATCAGTCATAA+TGG | + | chr5.2:24385850-24385869 | MS.gene027622:intron | 30.0% | |
| TCTTAATCACTTCACTGTTT+AGG | + | chr5.2:24385085-24385104 | MS.gene027622:intron | 30.0% | |
| TCTTGCAAATAGTTTCACAA+GGG | + | chr5.2:24384719-24384738 | MS.gene027622:intron | 30.0% | |
| TGAAAATTCAATTACAGTGG+TGG | + | chr5.2:24382981-24383000 | MS.gene027622:intron | 30.0% | |
| TGAATCTCATATTGGTCATA+GGG | + | chr5.2:24382734-24382753 | MS.gene027622:intron | 30.0% | |
| TGACATACTATCATCTTACT+TGG | + | chr5.2:24384469-24384488 | MS.gene027622:intron | 30.0% | |
| TTAACTCTTTGATCAGTTGT+AGG | + | chr5.2:24383009-24383028 | MS.gene027622:intron | 30.0% | |
| TTGAATCTCATATTGGTCAT+AGG | + | chr5.2:24382733-24382752 | MS.gene027622:intron | 30.0% | |
| ! | AACTTTGTTGTAATTTGCAG+GGG | + | chr5.2:24383302-24383321 | MS.gene027622:intron | 30.0% |
| ! | ACCACTGTAATTGAATTTTC+AGG | - | chr5.2:24382982-24383001 | None:intergenic | 30.0% |
| ! | AGGGATAACTTTTCTAATGA+TGG | + | chr5.2:24385105-24385124 | MS.gene027622:intron | 30.0% |
| ! | CCACTGTAATTGAATTTTCA+GGG | - | chr5.2:24382981-24383000 | None:intergenic | 30.0% |
| ! | CTATAACATGCTTTTCGATT+AGG | + | chr5.2:24385970-24385989 | MS.gene027622:intron | 30.0% |
| ! | CTATCTTTTCTACTGAAGAA+TGG | - | chr5.2:24384359-24384378 | None:intergenic | 30.0% |
| ! | GAACTTTGTTGTAATTTGCA+GGG | + | chr5.2:24383301-24383320 | MS.gene027622:intron | 30.0% |
| ! | GAAGTAGATCTTCAAGATTT+TGG | + | chr5.2:24383191-24383210 | MS.gene027622:intron | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | - | chr5.2:24384497-24384516 | None:intergenic | 30.0% |
| ! | TGAACTTTGTTGTAATTTGC+AGG | + | chr5.2:24383300-24383319 | MS.gene027622:intron | 30.0% |
| ! | TTTAAGATTGCGGAAAATAG+CGG | + | chr5.2:24385605-24385624 | MS.gene027622:intron | 30.0% |
| !! | ATGAAAGTATCAATTCTCTG+TGG | + | chr5.2:24382099-24382118 | MS.gene027622:intron | 30.0% |
| !! | GTATTTTTACAAAAGTGTGC+AGG | - | chr5.2:24383271-24383290 | None:intergenic | 30.0% |
| !! | GTCATCTTAGAGTTTGTTTT+AGG | - | chr5.2:24386251-24386270 | None:intergenic | 30.0% |
| !! | GTTGATTTGAAACTGCAAAA+TGG | + | chr5.2:24385821-24385840 | MS.gene027622:intron | 30.0% |
| !! | TACAGAGTGTTGTCAAATAA+CGG | - | chr5.2:24384019-24384038 | None:intergenic | 30.0% |
| !!! | AGCCCTTTTTTCTTGAATTT+AGG | + | chr5.2:24382219-24382238 | MS.gene027622:intron | 30.0% |
| !!! | GCCCTTTTTTCTTGAATTTA+GGG | + | chr5.2:24382220-24382239 | MS.gene027622:intron | 30.0% |
| !!! | TCTTATTTTCTGTATCCTCT+TGG | + | chr5.2:24385894-24385913 | MS.gene027622:intron | 30.0% |
| !!! | TTTTTTTTTCCTTCGTCATG+CGG | + | chr5.2:24384875-24384894 | MS.gene027622:intron | 30.0% |
| AAAAAAAAAAAAGCGAGGGG+GGG | - | chr5.2:24384808-24384827 | None:intergenic | 35.0% | |
| AATAGTTTCACAAGGGCTTA+TGG | + | chr5.2:24384726-24384745 | MS.gene027622:intron | 35.0% | |
| AATATGTGGAAAGGATCACA+GGG | - | chr5.2:24385571-24385590 | None:intergenic | 35.0% | |
| AATGACAAATCATGGGAACT+GGG | - | chr5.2:24383090-24383109 | None:intergenic | 35.0% | |
| AATGTTTCTCTCACAAGACA+TGG | - | chr5.2:24382715-24382734 | None:intergenic | 35.0% | |
| AATTGTCGCCAAGTATTCAA+AGG | + | chr5.2:24385447-24385466 | MS.gene027622:CDS | 35.0% | |
| AATTGTGAAAGAACACACCT+TGG | - | chr5.2:24385510-24385529 | None:intergenic | 35.0% | |
| ACAGAACTAGTACTATGAAG+GGG | - | chr5.2:24383437-24383456 | None:intergenic | 35.0% | |
| AGTTGTAGGTTCTTTCTCAT+TGG | + | chr5.2:24383023-24383042 | MS.gene027622:intron | 35.0% | |
| ATACAAACCACTCTTGAGAA+TGG | + | chr5.2:24384182-24384201 | MS.gene027622:intron | 35.0% | |
| ATATGTAGATGGTTGCTTAG+AGG | + | chr5.2:24383741-24383760 | MS.gene027622:intron | 35.0% | |
| ATGGTTGCTTAGAGGAATTT+GGG | + | chr5.2:24383749-24383768 | MS.gene027622:intron | 35.0% | |
| ATTGTGAAAGAACACACCTT+GGG | - | chr5.2:24385509-24385528 | None:intergenic | 35.0% | |
| CAAAAACACAGTATGAGTGT+TGG | - | chr5.2:24386379-24386398 | None:intergenic | 35.0% | |
| CAAAACCTACTGCTATATCA+GGG | - | chr5.2:24385005-24385024 | None:intergenic | 35.0% | |
| CCCTGAAAATTCAATTACAG+TGG | + | chr5.2:24382978-24382997 | MS.gene027622:intron | 35.0% | |
| CCTAACAGAAAATAGAAGTG+AGG | - | chr5.2:24384287-24384306 | None:intergenic | 35.0% | |
| CGAAATAGCATATCACAGAA+CGG | + | chr5.2:24385685-24385704 | MS.gene027622:intron | 35.0% | |
| CTCTTGCAAATAGTTTCACA+AGG | + | chr5.2:24384718-24384737 | MS.gene027622:intron | 35.0% | |
| CTTTAGCACTGTAGCATAAT+GGG | - | chr5.2:24383996-24384015 | None:intergenic | 35.0% | |
| GAAAAAAAAAAAAGCGAGGG+GGG | - | chr5.2:24384809-24384828 | None:intergenic | 35.0% | |
| GAAGATAAACCATTTGGTTG+AGG | - | chr5.2:24381817-24381836 | None:intergenic | 35.0% | |
| GCTTCATATGCATATCATTG+AGG | + | chr5.2:24385413-24385432 | MS.gene027622:CDS | 35.0% | |
| GGAAAAAAAAAAAAGCGAGG+GGG | - | chr5.2:24384810-24384829 | None:intergenic | 35.0% | |
| GGTTTATCTTCTGTTATTCC+TGG | + | chr5.2:24381826-24381845 | MS.gene027622:CDS | 35.0% | |
| GGTTTGTCTTTCAATGATCT+AGG | + | chr5.2:24385126-24385145 | MS.gene027622:intron | 35.0% | |
| GTGGAAAAGATTCTGTTTCA+AGG | + | chr5.2:24383342-24383361 | MS.gene027622:CDS | 35.0% | |
| TAATATGTGGAAAGGATCAC+AGG | - | chr5.2:24385572-24385591 | None:intergenic | 35.0% | |
| TAATGACAAATCATGGGAAC+TGG | - | chr5.2:24383091-24383110 | None:intergenic | 35.0% | |
| TAATTGATTGTTAGCTGGTG+TGG | + | chr5.2:24382045-24382064 | MS.gene027622:intron | 35.0% | |
| TATATTTCGCTGCAACCATT+TGG | + | chr5.2:24383124-24383143 | MS.gene027622:intron | 35.0% | |
| TATTCGCTATTTGACAACAC+TGG | + | chr5.2:24384102-24384121 | MS.gene027622:intron | 35.0% | |
| TCAAAACCTACTGCTATATC+AGG | - | chr5.2:24385006-24385025 | None:intergenic | 35.0% | |
| TGATCAGTGTTGTCAAATAG+CGG | - | chr5.2:24385760-24385779 | None:intergenic | 35.0% | |
| TGGAATGTTGGATCATTACA+AGG | + | chr5.2:24384202-24384221 | MS.gene027622:intron | 35.0% | |
| TGGCTATCATTCTCATCAAT+AGG | - | chr5.2:24386113-24386132 | None:intergenic | 35.0% | |
| TTCTCATCAATAGGATTCAC+CGG | - | chr5.2:24386104-24386123 | None:intergenic | 35.0% | |
| TTGAAAAGTTACGCAAGGAA+TGG | - | chr5.2:24384237-24384256 | None:intergenic | 35.0% | |
| TTGAAGTCTTCTTTCTTTGC+AGG | + | chr5.2:24384963-24384982 | MS.gene027622:intron | 35.0% | |
| TTGGTTGAATATGCATATGC+TGG | + | chr5.2:24383160-24383179 | MS.gene027622:intron | 35.0% | |
| TTTAGAAGCAATTGCTCTCT+TGG | - | chr5.2:24386491-24386510 | None:intergenic | 35.0% | |
| TTTATGCTTTGCTCAACTGA+GGG | + | chr5.2:24386056-24386075 | MS.gene027622:CDS | 35.0% | |
| TTTCAGCTTTCAACCTCAAA+AGG | - | chr5.2:24382686-24382705 | None:intergenic | 35.0% | |
| ! | CCTCACTTCTATTTTCTGTT+AGG | + | chr5.2:24384284-24384303 | MS.gene027622:intron | 35.0% |
| ! | GGACACATTTTCATCAATCA+AGG | + | chr5.2:24382373-24382392 | MS.gene027622:intron | 35.0% |
| ! | GTGTTTTGCAGAGTGTAAAT+GGG | - | chr5.2:24385546-24385565 | None:intergenic | 35.0% |
| ! | GTTTTGTAGTCAGCAACATA+TGG | + | chr5.2:24383474-24383493 | MS.gene027622:intron | 35.0% |
| ! | TCTAGGAGTTGCATTTTTGA+AGG | + | chr5.2:24385143-24385162 | MS.gene027622:intron | 35.0% |
| ! | TGATATAGCAGTAGGTTTTG+AGG | + | chr5.2:24385005-24385024 | MS.gene027622:CDS | 35.0% |
| ! | TGTGTTTTGCAGAGTGTAAA+TGG | - | chr5.2:24385547-24385566 | None:intergenic | 35.0% |
| ! | TTTTATGCTTTGCTCAACTG+AGG | + | chr5.2:24386055-24386074 | MS.gene027622:CDS | 35.0% |
| ! | TTTTCAAAAAGCTCTTGAGC+AGG | - | chr5.2:24385321-24385340 | None:intergenic | 35.0% |
| ! | TTTTGCTCTTCAAGATGGAT+TGG | + | chr5.2:24382290-24382309 | MS.gene027622:intron | 35.0% |
| ! | TTTTTCCCTGATATAGCAGT+AGG | + | chr5.2:24384997-24385016 | MS.gene027622:CDS | 35.0% |
| !! | ATATGGCAAGGTTCTTGTTT+TGG | + | chr5.2:24383491-24383510 | MS.gene027622:CDS | 35.0% |
| !! | CGTGTTTTTATAAGTTGTCC+TGG | + | chr5.2:24384635-24384654 | MS.gene027622:intron | 35.0% |
| !! | TTCTGTTAGGTTTTGGTCAT+TGG | + | chr5.2:24384297-24384316 | MS.gene027622:intron | 35.0% |
| !! | TTTTGTTTCAGTGGGATGAT+TGG | + | chr5.2:24386032-24386051 | MS.gene027622:intron | 35.0% |
| !!! | AGTTTGTTTTAGGCCTCATT+AGG | - | chr5.2:24386241-24386260 | None:intergenic | 35.0% |
| !!! | GTTTGTTTTAGGCCTCATTA+GGG | - | chr5.2:24386240-24386259 | None:intergenic | 35.0% |
| !!! | TGAAAAGCCCTTTTTTGAGT+CGG | + | chr5.2:24385335-24385354 | MS.gene027622:CDS | 35.0% |
| !!! | TTTTGTTGTTTGTTGGGTCA+TGG | + | chr5.2:24382009-24382028 | MS.gene027622:intron | 35.0% |
| !!! | TTTTTTCCTTCAAGTTGGGT+GGG | + | chr5.2:24384822-24384841 | MS.gene027622:intron | 35.0% |
| !!! | TTTTTTTCCTTCAAGTTGGG+TGG | + | chr5.2:24384821-24384840 | MS.gene027622:intron | 35.0% |
| ACAGCAGCACTATAATGTAG+TGG | - | chr5.2:24384083-24384102 | None:intergenic | 40.0% | |
| ACTGCATCATAAGTTCCTTC+TGG | - | chr5.2:24385174-24385193 | None:intergenic | 40.0% | |
| ATATGTCGAAGAGAGTAGGA+AGG | + | chr5.2:24384131-24384150 | MS.gene027622:intron | 40.0% | |
| ATGAGTGATCATCTCTTGGT+AGG | - | chr5.2:24383553-24383572 | None:intergenic | 40.0% | |
| ATTGCTCTCTTGGCAAAAGA+TGG | - | chr5.2:24386481-24386500 | None:intergenic | 40.0% | |
| CAACATTCCATTCTCAAGAG+TGG | - | chr5.2:24384192-24384211 | None:intergenic | 40.0% | |
| CACTCTTGAGAATGGAATGT+TGG | + | chr5.2:24384190-24384209 | MS.gene027622:intron | 40.0% | |
| CCAAAAGAACCTCAACCAAA+TGG | + | chr5.2:24381805-24381824 | MS.gene027622:CDS | 40.0% | |
| CCACGTGTGACACTTAATAT+CGG | + | chr5.2:24385030-24385049 | MS.gene027622:CDS | 40.0% | |
| CGTTACAGTGTTGTCAATCT+CGG | + | chr5.2:24383942-24383961 | MS.gene027622:intron | 40.0% | |
| CTGTATGAAATCACGTCTCA+CGG | + | chr5.2:24384034-24384053 | MS.gene027622:intron | 40.0% | |
| GAAGATCAACTACCTCACAA+CGG | + | chr5.2:24381766-24381785 | MS.gene027622:CDS | 40.0% | |
| GAAGATGAGTGATCATCTCT+TGG | - | chr5.2:24383557-24383576 | None:intergenic | 40.0% | |
| GATGGTTGCTTAGAGGAATT+TGG | + | chr5.2:24383748-24383767 | MS.gene027622:intron | 40.0% | |
| GCTTTAGCACTGTAGCATAA+TGG | - | chr5.2:24383997-24384016 | None:intergenic | 40.0% | |
| GCTTTAGTGACATAGGACTT+AGG | + | chr5.2:24386320-24386339 | MS.gene027622:intron | 40.0% | |
| GTTACAGTGTTGTCAATCTC+GGG | + | chr5.2:24383943-24383962 | MS.gene027622:intron | 40.0% | |
| TATCTTCTGTTATTCCTGGC+TGG | + | chr5.2:24381830-24381849 | MS.gene027622:CDS | 40.0% | |
| TATGTTTGGATGGAGGGTTT+AGG | + | chr5.2:24382783-24382802 | MS.gene027622:intron | 40.0% | |
| TATTGGTCATAGGGTGAAAG+TGG | + | chr5.2:24382743-24382762 | MS.gene027622:intron | 40.0% | |
| TCTTCTCTTTGCCTCTTCAA+GGG | - | chr5.2:24381736-24381755 | None:intergenic | 40.0% | |
| TGACAGAGCCTTTGAATACT+TGG | - | chr5.2:24385458-24385477 | None:intergenic | 40.0% | |
| TTATGCTTTGCTCAACTGAG+GGG | + | chr5.2:24386057-24386076 | MS.gene027622:CDS | 40.0% | |
| TTCTTCTCTTTGCCTCTTCA+AGG | - | chr5.2:24381737-24381756 | None:intergenic | 40.0% | |
| ! | AACAAGGGCTTTAGTGACAT+AGG | + | chr5.2:24386313-24386332 | MS.gene027622:intron | 40.0% |
| ! | CCATTTGGTTGAGGTTCTTT+TGG | - | chr5.2:24381808-24381827 | None:intergenic | 40.0% |
| ! | CTTGCAACCGACTCAAAAAA+GGG | - | chr5.2:24385345-24385364 | None:intergenic | 40.0% |
| ! | TGGTATAGTGTCACCTTTTG+AGG | + | chr5.2:24382670-24382689 | MS.gene027622:intron | 40.0% |
| ! | TTTGTTGTAATTTGCAGGGG+AGG | + | chr5.2:24383305-24383324 | MS.gene027622:intron | 40.0% |
| ! | TTTTAGGCCTCATTAGGGTT+TGG | - | chr5.2:24386235-24386254 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGTCTGTTTCAG+AGG | - | chr5.2:24382968-24382987 | None:intergenic | 40.0% |
| !! | TCTCTGAAATTAGCCCAATG+TGG | + | chr5.2:24381854-24381873 | MS.gene027622:CDS | 40.0% |
| !! | TGTTAGGTTTTGGTCATTGG+TGG | + | chr5.2:24384300-24384319 | MS.gene027622:intron | 40.0% |
| !! | TTTTCAGGGTCTGTTTCAGA+GGG | - | chr5.2:24382967-24382986 | None:intergenic | 40.0% |
| !!! | CAAGGTTCTTGTTTTGGATG+GGG | + | chr5.2:24383497-24383516 | MS.gene027622:CDS | 40.0% |
| !!! | CTTTTTTGAGTCGGTTGCAA+GGG | + | chr5.2:24385344-24385363 | MS.gene027622:CDS | 40.0% |
| !!! | GCAAGGTTCTTGTTTTGGAT+GGG | + | chr5.2:24383496-24383515 | MS.gene027622:CDS | 40.0% |
| !!! | TAAGGGAAGTTTTGGGGTAA+GGG | - | chr5.2:24386199-24386218 | None:intergenic | 40.0% |
| !!! | TCAAATACCTTTTTGGGGTG+TGG | - | chr5.2:24383594-24383613 | None:intergenic | 40.0% |
| AAAACGAACCAGGCCACATT+GGG | - | chr5.2:24381870-24381889 | None:intergenic | 45.0% | |
| AAAGTGGTGATTGAACTCCG+AGG | + | chr5.2:24382759-24382778 | MS.gene027622:intron | 45.0% | |
| AAGGCTCTGTCAACTATGCT+TGG | + | chr5.2:24385466-24385485 | MS.gene027622:CDS | 45.0% | |
| AAGGGAAAATCTGTGGACTC+AGG | - | chr5.2:24381718-24381737 | None:intergenic | 45.0% | |
| AAGTGGTGATTGAACTCCGA+GGG | + | chr5.2:24382760-24382779 | MS.gene027622:intron | 45.0% | |
| ACCCACAAACAAGTCAGAAC+CGG | - | chr5.2:24386346-24386365 | None:intergenic | 45.0% | |
| AGAACACACCTTGGGTATGT+AGG | - | chr5.2:24385501-24385520 | None:intergenic | 45.0% | |
| AGCGCAGTGTGAGATTTCAA+GGG | + | chr5.2:24382498-24382517 | MS.gene027622:intron | 45.0% | |
| CACGCTTGAAAAGTTACGCA+AGG | - | chr5.2:24384242-24384261 | None:intergenic | 45.0% | |
| CATCTTACTTGGGTCCTGTT+TGG | + | chr5.2:24384480-24384499 | MS.gene027622:intron | 45.0% | |
| CCGATATTAAGTGTCACACG+TGG | - | chr5.2:24385033-24385052 | None:intergenic | 45.0% | |
| CCTCTTCAAGGGAAAATCTG+TGG | - | chr5.2:24381725-24381744 | None:intergenic | 45.0% | |
| CTAATTTCAGAGAACCAGCC+AGG | - | chr5.2:24381847-24381866 | None:intergenic | 45.0% | |
| CTCAATTCCACACCCCAAAA+AGG | + | chr5.2:24383584-24383603 | MS.gene027622:CDS | 45.0% | |
| CTCTTGGAGACCAATTGTGT+TGG | + | chr5.2:24385910-24385929 | MS.gene027622:intron | 45.0% | |
| GATTGTTAGCTGGTGTGGTT+TGG | + | chr5.2:24382050-24382069 | MS.gene027622:intron | 45.0% | |
| GCAAACAGAAAGCTGCTGAA+TGG | - | chr5.2:24386459-24386478 | None:intergenic | 45.0% | |
| GCAGAGTGTAAATGGGAAAG+TGG | - | chr5.2:24385539-24385558 | None:intergenic | 45.0% | |
| GCTATAGAATTGTCGCAGAG+CGG | - | chr5.2:24385643-24385662 | None:intergenic | 45.0% | |
| GGTCATTCAGCTCACAGAAA+GGG | + | chr5.2:24383518-24383537 | MS.gene027622:CDS | 45.0% | |
| GTAGTCAGCAACATATGGCA+AGG | + | chr5.2:24383479-24383498 | MS.gene027622:intron | 45.0% | |
| GTGACACTTAATATCGGCGA+TGG | + | chr5.2:24385036-24385055 | MS.gene027622:CDS | 45.0% | |
| GTGATGAGAGAAAACGAACC+AGG | - | chr5.2:24381880-24381899 | None:intergenic | 45.0% | |
| GTGGATTCATCCGATCCTAT+TGG | + | chr5.2:24385198-24385217 | MS.gene027622:CDS | 45.0% | |
| TAACTGAAGCTGCATGTACC+TGG | - | chr5.2:24383398-24383417 | None:intergenic | 45.0% | |
| TAGTGACATAGGACTTAGGC+CGG | + | chr5.2:24386324-24386343 | MS.gene027622:intron | 45.0% | |
| TCAGGATGTTATGGTCTTCC+AGG | + | chr5.2:24383377-24383396 | MS.gene027622:CDS | 45.0% | |
| TCTCGGGATGTGGAAAATAG+TGG | + | chr5.2:24383959-24383978 | MS.gene027622:intron | 45.0% | |
| TGTCAACTATGCTTGGACCA+CGG | + | chr5.2:24385473-24385492 | MS.gene027622:CDS | 45.0% | |
| TTCGCTGCAACCATTTGGTA+TGG | + | chr5.2:24383129-24383148 | MS.gene027622:intron | 45.0% | |
| TTTCAGGGTCTGTTTCAGAG+GGG | - | chr5.2:24382966-24382985 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5.2:24382787-24382806 | MS.gene027622:intron | 45.0% | |
| ! | CAACACAATTGGTCTCCAAG+AGG | - | chr5.2:24385912-24385931 | None:intergenic | 45.0% |
| ! | CAACGCTAAGGGAAGTTTTG+GGG | - | chr5.2:24386205-24386224 | None:intergenic | 45.0% |
| ! | CCAACGCTAAGGGAAGTTTT+GGG | - | chr5.2:24386206-24386225 | None:intergenic | 45.0% |
| ! | CCACAGATTTTCCCTTGAAG+AGG | + | chr5.2:24381722-24381741 | MS.gene027622:CDS | 45.0% |
| ! | CCTTGCAACCGACTCAAAAA+AGG | - | chr5.2:24385346-24385365 | None:intergenic | 45.0% |
| ! | GCCTCATTAGGGTTTGGTTT+GGG | - | chr5.2:24386229-24386248 | None:intergenic | 45.0% |
| ! | GTACTCAGGCGGAAAGTATA+TGG | + | chr5.2:24385391-24385410 | MS.gene027622:CDS | 45.0% |
| ! | TTCGGTCGATTTCAAGCATC+CGG | + | chr5.2:24386082-24386101 | MS.gene027622:CDS | 45.0% |
| ! | TTGAACTCCGAGGGTATGTT+TGG | + | chr5.2:24382769-24382788 | MS.gene027622:intron | 45.0% |
| !! | TAGGTTTTGGTCATTGGTGG+AGG | + | chr5.2:24384303-24384322 | MS.gene027622:intron | 45.0% |
| !! | TTTTTGAAGGCAGCTCCAGA+AGG | + | chr5.2:24385156-24385175 | MS.gene027622:CDS | 45.0% |
| !!! | CCTTTTTTGAGTCGGTTGCA+AGG | + | chr5.2:24385343-24385362 | MS.gene027622:CDS | 45.0% |
| !!! | CTAAGGGAAGTTTTGGGGTA+AGG | - | chr5.2:24386200-24386219 | None:intergenic | 45.0% |
| !!! | GGCAAGGTTCTTGTTTTGGA+TGG | + | chr5.2:24383495-24383514 | MS.gene027622:CDS | 45.0% |
| !! | TAAAAAAAATTAACATAAAA+GGG | - | chr5.2:24382260-24382279 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATTAACATAAA+AGG | - | chr5.2:24382261-24382280 | None:intergenic | 5.0% |
| !!! | TTATTATTATTTTTTTGTTT+AGG | + | chr5.2:24385294-24385313 | MS.gene027622:intron | 5.0% |
| ATCTGTGGACTCAGGAAGTG+TGG | - | chr5.2:24381710-24381729 | None:intergenic | 50.0% | |
| CACGTCTCACGGAGTAATAG+TGG | + | chr5.2:24384045-24384064 | MS.gene027622:intron | 50.0% | |
| CAGCGCAGTGTGAGATTTCA+AGG | + | chr5.2:24382497-24382516 | MS.gene027622:intron | 50.0% | |
| CCCAAAACTTCCCTTAGCGT+TGG | + | chr5.2:24386203-24386222 | MS.gene027622:intron | 50.0% | |
| CCTCCATCCAAACATACCCT+CGG | - | chr5.2:24382779-24382798 | None:intergenic | 50.0% | |
| GAAAACGAACCAGGCCACAT+TGG | - | chr5.2:24381871-24381890 | None:intergenic | 50.0% | |
| GAAATTAGCCCAATGTGGCC+TGG | + | chr5.2:24381859-24381878 | MS.gene027622:CDS | 50.0% | |
| GAGAATGATAGCCAGCATGC+AGG | + | chr5.2:24386119-24386138 | MS.gene027622:CDS | 50.0% | |
| GAGATACCCACCCAACTTGA+AGG | - | chr5.2:24384831-24384850 | None:intergenic | 50.0% | |
| GCCCAAACCAAACCCTAATG+AGG | + | chr5.2:24386225-24386244 | MS.gene027622:intron | 50.0% | |
| GGATGCTTGAAATCGACCGA+AGG | - | chr5.2:24386083-24386102 | None:intergenic | 50.0% | |
| GGGTCATTCAGCTCACAGAA+AGG | + | chr5.2:24383517-24383536 | MS.gene027622:CDS | 50.0% | |
| GGGTGTGGAATTGAGCAAAG+AGG | - | chr5.2:24383579-24383598 | None:intergenic | 50.0% | |
| GTGTGTAGCAGGAGTTAGCA+CGG | - | chr5.2:24383831-24383850 | None:intergenic | 50.0% | |
| GTGTTGTCAATCTCGGGATG+TGG | + | chr5.2:24383949-24383968 | MS.gene027622:intron | 50.0% | |
| GTTTCAGAGACACCGTTGTG+AGG | - | chr5.2:24381781-24381800 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5.2:24382786-24382805 | MS.gene027622:intron | 50.0% | |
| TCAATGGTCTTCCTGCATGC+TGG | - | chr5.2:24386133-24386152 | None:intergenic | 50.0% | |
| TGAGTACACACAACACCTCC+TGG | - | chr5.2:24385378-24385397 | None:intergenic | 50.0% | |
| TTCAGGGTCTGTTTCAGAGG+GGG | - | chr5.2:24382965-24382984 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5.2:24382788-24382807 | MS.gene027622:intron | 50.0% | |
| TTGGTCATTGGTGGAGGAGA+TGG | + | chr5.2:24384309-24384328 | MS.gene027622:CDS | 50.0% | |
| ! | ACTCCGAGGGTATGTTTGGA+TGG | + | chr5.2:24382773-24382792 | MS.gene027622:intron | 50.0% |
| ! | AGGTGTTGTGTGTACTCAGG+CGG | + | chr5.2:24385380-24385399 | MS.gene027622:CDS | 50.0% |
| ! | CGAGGGTATGTTTGGATGGA+GGG | + | chr5.2:24382777-24382796 | MS.gene027622:intron | 50.0% |
| ! | GATTTTAGGCCGCATGACGA+AGG | - | chr5.2:24384887-24384906 | None:intergenic | 50.0% |
| ! | GCCAACGCTAAGGGAAGTTT+TGG | - | chr5.2:24386207-24386226 | None:intergenic | 50.0% |
| ! | GGCCTCATTAGGGTTTGGTT+TGG | - | chr5.2:24386230-24386249 | None:intergenic | 50.0% |
| ! | TCTGTTTCAGAGGGGGGTTT+TGG | - | chr5.2:24382958-24382977 | None:intergenic | 50.0% |
| !! | AGGAGGTGTTGTGTGTACTC+AGG | + | chr5.2:24385377-24385396 | MS.gene027622:CDS | 50.0% |
| !! | GCCGGTTCTGACTTGTTTGT+GGG | + | chr5.2:24386342-24386361 | MS.gene027622:intron | 50.0% |
| !! | TTGGTTTGGGCCAACGCTAA+GGG | - | chr5.2:24386216-24386235 | None:intergenic | 50.0% |
| !! | TTTGGTTTGGGCCAACGCTA+AGG | - | chr5.2:24386217-24386236 | None:intergenic | 50.0% |
| !!! | TTTCAGAGGGGGGTTTTGGA+TGG | - | chr5.2:24382954-24382973 | None:intergenic | 50.0% |
| AAAAAAAGCGAGGGGGGGAG+AGG | - | chr5.2:24384803-24384822 | None:intergenic | 55.0% | |
| AATGGCGTGAAACTTCCCGC+AGG | - | chr5.2:24384341-24384360 | None:intergenic | 55.0% | |
| AGCAGGAGTTAGCACGGTGA+CGG | - | chr5.2:24383825-24383844 | None:intergenic | 55.0% | |
| AGGGGAGGCTCACTCATTGA+AGG | + | chr5.2:24383320-24383339 | MS.gene027622:intron | 55.0% | |
| CCACGGTTCCTACATACCCA+AGG | + | chr5.2:24385490-24385509 | MS.gene027622:CDS | 55.0% | |
| CCTTGGGTATGTAGGAACCG+TGG | - | chr5.2:24385493-24385512 | None:intergenic | 55.0% | |
| GGAGAGGCAGACTGAGACTA+GGG | - | chr5.2:24384787-24384806 | None:intergenic | 55.0% | |
| GGAGGCTCACTCATTGAAGG+TGG | + | chr5.2:24383323-24383342 | MS.gene027622:CDS | 55.0% | |
| GTCATTGGTGGAGGAGATGG+AGG | + | chr5.2:24384312-24384331 | MS.gene027622:CDS | 55.0% | |
| TCAGGGTCTGTTTCAGAGGG+GGG | - | chr5.2:24382964-24382983 | None:intergenic | 55.0% | |
| TTGCTCAACTGAGGGGCCTT+CGG | + | chr5.2:24386064-24386083 | MS.gene027622:CDS | 55.0% | |
| ! | CCGAGGGTATGTTTGGATGG+AGG | + | chr5.2:24382776-24382795 | MS.gene027622:intron | 55.0% |
| !! | GGCCGGTTCTGACTTGTTTG+TGG | + | chr5.2:24386341-24386360 | MS.gene027622:intron | 55.0% |
| AGGAGATGGAGGAGTCCTGC+GGG | + | chr5.2:24384323-24384342 | MS.gene027622:CDS | 60.0% | |
| GAGGAGATGGAGGAGTCCTG+CGG | + | chr5.2:24384322-24384341 | MS.gene027622:CDS | 60.0% | |
| GCAGGAGTTAGCACGGTGAC+GGG | - | chr5.2:24383824-24383843 | None:intergenic | 60.0% | |
| GGGAGAGGCAGACTGAGACT+AGG | - | chr5.2:24384788-24384807 | None:intergenic | 60.0% | |
| GTTGCAAGGGCTCTTCGTCC+AGG | + | chr5.2:24385357-24385376 | MS.gene027622:CDS | 60.0% | |
| GCAAGGGCTCTTCGTCCAGG+AGG | + | chr5.2:24385360-24385379 | MS.gene027622:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 24381685 | 24386519 | 24381685 | ID=MS.gene027622 |
| chr5.2 | mRNA | 24381685 | 24386519 | 24381685 | ID=MS.gene027622.t1;Parent=MS.gene027622 |
| chr5.2 | exon | 24381685 | 24381880 | 24381685 | ID=MS.gene027622.t1.exon1;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24381685 | 24381880 | 24381685 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24383322 | 24383398 | 24383322 | ID=MS.gene027622.t1.exon2;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24383322 | 24383398 | 24383322 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24383483 | 24383605 | 24383483 | ID=MS.gene027622.t1.exon3;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24383483 | 24383605 | 24383483 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24384306 | 24384410 | 24384306 | ID=MS.gene027622.t1.exon4;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24384306 | 24384410 | 24384306 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24384985 | 24385057 | 24384985 | ID=MS.gene027622.t1.exon5;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24384985 | 24385057 | 24384985 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24385148 | 24385219 | 24385148 | ID=MS.gene027622.t1.exon6;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24385148 | 24385219 | 24385148 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24385316 | 24385511 | 24385316 | ID=MS.gene027622.t1.exon7;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24385316 | 24385511 | 24385316 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24386043 | 24386169 | 24386043 | ID=MS.gene027622.t1.exon8;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24386043 | 24386169 | 24386043 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| chr5.2 | exon | 24386454 | 24386519 | 24386454 | ID=MS.gene027622.t1.exon9;Parent=MS.gene027622.t1 |
| chr5.2 | CDS | 24386454 | 24386519 | 24386454 | ID=cds.MS.gene027622.t1;Parent=MS.gene027622.t1 |
| Gene Sequence |
| Protein sequence |
