AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027785

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027785.t1 MTR_5g032140 97.217 503 13 1 344 846 218 719 0.0 989
MS.gene027785.t1 MTR_5g032140 98.603 358 5 0 1 358 1 358 0.0 721
MS.gene027785.t1 MTR_5g032140 97.217 503 13 1 344 846 205 706 0.0 988
MS.gene027785.t1 MTR_5g032140 98.551 345 5 0 14 358 1 345 0.0 694
MS.gene027785.t1 MTR_2g064840 40.657 487 268 8 357 831 525 1002 3.08e-99 332
MS.gene027785.t1 MTR_2g064840 60.248 161 61 2 200 357 495 655 1.63e-53 202
MS.gene027785.t1 MTR_5g029870 81.159 138 23 1 454 591 4 138 2.16e-66 219
MS.gene027785.t1 MTR_1g098970 40.310 129 62 2 200 313 235 363 2.15e-21 100
MS.gene027785.t1 MTR_1g098970 25.635 433 223 18 357 715 265 672 3.47e-18 90.1
MS.gene027785.t1 MTR_1g099000 40.310 129 62 2 200 313 749 877 5.87e-21 99.8
MS.gene027785.t1 MTR_1g099000 25.520 529 292 21 357 810 779 1280 2.45e-19 94.4
MS.gene027785.t1 MTR_1g052535 30.811 185 102 7 191 352 70 251 7.28e-12 68.9
MS.gene027785.t1 MTR_3g097250 32.895 152 79 4 193 321 70 221 8.43e-12 69.3
MS.gene027785.t1 MTR_1g052535 30.811 185 102 7 191 352 70 251 1.67e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027785.t1 AT4G11160 71.373 510 137 5 344 846 234 741 0.0 716
MS.gene027785.t1 AT4G11160 60.000 375 122 9 7 358 6 375 1.93e-129 405
MS.gene027785.t1 AT4G11160 71.373 510 137 5 344 846 236 743 0.0 716
MS.gene027785.t1 AT4G11160 59.367 379 127 10 1 358 5 377 4.09e-129 404
MS.gene027785.t1 AT4G11160 73.817 317 76 3 344 654 236 551 4.26e-151 456
MS.gene027785.t1 AT4G11160 59.367 379 127 10 1 358 5 377 1.81e-131 405
MS.gene027785.t1 AT1G17220 40.741 486 269 6 357 831 530 1007 6.08e-94 318
MS.gene027785.t1 AT1G17220 59.627 161 62 1 200 357 500 660 1.35e-48 187
MS.gene027785.t1 AT1G76810 39.568 139 68 3 190 313 695 832 2.53e-21 100
MS.gene027785.t1 AT1G76810 24.670 531 294 18 357 810 734 1235 7.20e-17 86.3
MS.gene027785.t1 AT1G21160 39.535 129 63 2 200 313 496 624 3.36e-21 100
MS.gene027785.t1 AT1G76720 38.235 136 68 3 193 313 654 788 9.00e-20 95.9
MS.gene027785.t1 AT1G76720 27.074 229 119 6 357 537 690 918 3.53e-12 71.2
MS.gene027785.t1 AT1G76720 38.235 136 68 3 193 313 621 755 1.02e-19 95.5
MS.gene027785.t1 AT1G76720 27.074 229 119 6 357 537 657 885 4.33e-12 70.9
MS.gene027785.t1 AT2G27700 34.109 129 69 2 200 313 35 162 2.30e-16 83.2
MS.gene027785.t1 AT2G27700 24.249 433 231 16 357 715 64 473 1.34e-12 71.6
MS.gene027785.t1 AT2G27700 34.109 129 69 2 200 313 35 162 2.41e-16 83.2
MS.gene027785.t1 AT2G27700 23.843 432 233 15 357 715 64 472 1.06e-12 71.6
MS.gene027785.t1 AT5G39900 33.721 172 84 4 204 352 69 233 6.49e-14 76.3
MS.gene027785.t1 AT5G08650 30.061 163 91 2 182 321 62 224 1.21e-12 72.0
MS.gene027785.t1 AT5G08650 30.061 163 91 2 182 321 62 224 1.39e-12 72.0
MS.gene027785.t1 AT5G13650 34.066 182 90 8 204 360 86 262 2.03e-12 71.2
MS.gene027785.t1 AT5G13650 34.066 182 90 8 204 360 85 261 2.25e-12 71.2

Find 226 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCCGACTTAATAAATT+TGG 0.122459 5.2:+22161732 None:intergenic
CTCACATACTTCTCCCTCTT+TGG 0.129249 5.2:+22165216 None:intergenic
GGCCTTCTCTATTATCAAAT+TGG 0.244623 5.2:+22162074 None:intergenic
TCACATACTTCTCCCTCTTT+GGG 0.245908 5.2:+22165217 None:intergenic
ACCTGAGTCTCGGGTGTACC+TGG 0.267664 5.2:+22162051 None:intergenic
GGAGATGGGTGGGGATATTC+AGG 0.275437 5.2:-22163527 MS.gene027785:CDS
GGAGATGGGTGGGGATATTC+AGG 0.275437 5.2:-22163908 MS.gene027785:CDS
ACTGCCATTTCAACCCTCTT+TGG 0.276071 5.2:+22163043 None:intergenic
GGGACACAGCTTCAAGTGTT+TGG 0.288016 5.2:+22163662 None:intergenic
GGGACACAGCTTCAAGTGTT+TGG 0.288016 5.2:+22164043 None:intergenic
GTTGAACTGGCAAAGCGTTC+TGG 0.303622 5.2:-22165081 MS.gene027785:CDS
GGACACAGCTTCAAGTGTTT+GGG 0.304917 5.2:+22163663 None:intergenic
GGACACAGCTTCAAGTGTTT+GGG 0.304917 5.2:+22164044 None:intergenic
TCAATCTCCACAGGCATTGC+TGG 0.315953 5.2:+22163229 None:intergenic
CTCTCCGACTTAATAAATTT+GGG 0.320360 5.2:+22161733 None:intergenic
GAAATGGCAGTAATTGTAAA+AGG 0.326721 5.2:-22163031 MS.gene027785:CDS
CAGCAACCATGAGGCTTCTA+AGG 0.327625 5.2:-22161918 MS.gene027785:CDS
TTCAGAGGGCTTGCTGTTAG+AGG 0.337080 5.2:-22163548 MS.gene027785:CDS
TTCAGAGGGCTTGCTGTTAG+AGG 0.337080 5.2:-22163929 MS.gene027785:CDS
GCTGCTTGGGTAAGAGAAAT+AGG 0.339802 5.2:+22162430 None:intergenic
TCCACGTCGGATTGAGAAAT+AGG 0.351892 5.2:+22162505 None:intergenic
AATTGTAAAAGGAGATGTTC+AGG 0.356652 5.2:-22163020 MS.gene027785:CDS
AGTGAAAGGGAGCAAATCTA+AGG 0.362028 5.2:-22161995 MS.gene027785:CDS
AGAGGAAGCTTTACTCCTTC+AGG 0.368367 5.2:-22163461 MS.gene027785:CDS
GATCTTAAAGCACGATTTGA+TGG 0.369791 5.2:-22163427 MS.gene027785:CDS
CCGTGTGATTTACCACCTAT+TGG 0.377299 5.2:-22162106 MS.gene027785:CDS
TTATTGACTGCAACTACAAC+TGG 0.378111 5.2:+22163619 None:intergenic
TTATTGACTGCAACTACAAC+TGG 0.378111 5.2:+22164000 None:intergenic
AATTTGAAGAGGACAGGCTT+AGG 0.382248 5.2:-22163114 MS.gene027785:CDS
TCAGTATCATCTGAAGTAGT+TGG 0.393486 5.2:+22163073 None:intergenic
GACCTTGTTCGTCTCTTAAG+AGG 0.400893 5.2:-22161873 MS.gene027785:CDS
TATGAACTTTACCAGAGCTT+TGG 0.407075 5.2:-22166018 MS.gene027785:CDS
TTGCCCAGCCACCTGAGTCT+CGG 0.408386 5.2:+22162041 None:intergenic
TGCCCAGCCACCTGAGTCTC+GGG 0.408821 5.2:+22162042 None:intergenic
TAGGTGTGGCTGGTTATAGT+AGG 0.410197 5.2:-22165789 MS.gene027785:CDS
ACTCCTTCAGGCTGATATGA+TGG 0.413624 5.2:-22163449 MS.gene027785:CDS
AGTAATGCCACCAGCTTCCT+TGG 0.417665 5.2:+22164224 None:intergenic
TGCTGCACCTCTTGCTCGCA+TGG 0.419039 5.2:+22163735 None:intergenic
TGCTGCACCTCTTGCTCGCA+TGG 0.419039 5.2:+22164116 None:intergenic
TCAGCATCTAGGTGCCTTTG+TGG 0.425469 5.2:-22163821 MS.gene027785:CDS
TCAGCATCTAGGTGCCTTTG+TGG 0.425469 5.2:-22164202 MS.gene027785:CDS
GGGCTTGCTGTTAGAGGAGA+TGG 0.426121 5.2:-22163542 MS.gene027785:CDS
GGGCTTGCTGTTAGAGGAGA+TGG 0.426121 5.2:-22163923 MS.gene027785:CDS
CAAGATATTCTCACAACTGT+TGG 0.433729 5.2:-22165039 MS.gene027785:CDS
ATTTGAAGAGGACAGGCTTA+GGG 0.435192 5.2:-22163113 MS.gene027785:CDS
GCTTGCGGTGCATGCATAGT+TGG 0.436862 5.2:-22162472 MS.gene027785:CDS
CCTGAGTCTCGGGTGTACCT+GGG 0.437418 5.2:+22162052 None:intergenic
AGGCATGACCCTTGTTGAAC+TGG 0.440050 5.2:-22165094 MS.gene027785:CDS
TTTGTGGTGGGCATGTCATC+AGG 0.441533 5.2:-22163805 MS.gene027785:CDS
TTTGTGGTGGGCATGTCATC+AGG 0.441533 5.2:-22164186 MS.gene027785:CDS
TGTGGACAGCATGTGGTTGT+AGG 0.444121 5.2:-22163316 MS.gene027785:CDS
GGGACGTGTGGAGCGTCAAC+AGG 0.446013 5.2:+22165171 None:intergenic
TGCTGTTAGAGGAGATGGGT+GGG 0.449295 5.2:-22163537 MS.gene027785:CDS
TGCTGTTAGAGGAGATGGGT+GGG 0.449295 5.2:-22163918 MS.gene027785:CDS
ACACCCGAGACTCAGGTGGC+TGG 0.449642 5.2:-22162045 MS.gene027785:CDS
AGAGTTTGAGCCTCTCAGTA+TGG 0.451008 5.2:-22165001 MS.gene027785:CDS
AGTGCTTAGAACAAGTAGTT+AGG 0.451043 5.2:-22161759 MS.gene027785:CDS
TGACCCATCACTGTTACAAC+TGG 0.451970 5.2:+22164303 None:intergenic
CTGAATATCTTTGAAGTGAA+AGG 0.453512 5.2:-22162009 MS.gene027785:CDS
TTTGCTGAAGCTTGGAAAGA+AGG 0.454649 5.2:-22166204 MS.gene027785:intron
ACTAGCACGAGTTGCTGCTT+GGG 0.456407 5.2:+22162417 None:intergenic
CACTCATGTATAGGTGTGGC+TGG 0.456702 5.2:-22165799 MS.gene027785:CDS
CGGGCTAGAATGCTTAGTTC+TGG 0.456720 5.2:-22163148 MS.gene027785:CDS
GTGGAGATTGAAGGGCTTCG+AGG 0.458149 5.2:-22163217 MS.gene027785:CDS
AATTGGCTACGTCTTCCAAT+AGG 0.462672 5.2:+22162091 None:intergenic
TACTAGCACGAGTTGCTGCT+TGG 0.463126 5.2:+22162416 None:intergenic
AAAAGAAATTTGAAGAGGAC+AGG 0.464360 5.2:-22163120 MS.gene027785:CDS
TCCATGCTAGCTCACAAGTC+TGG 0.464520 5.2:-22165272 MS.gene027785:CDS
AGGGAGAAGTATGTGAGAAA+AGG 0.466796 5.2:-22165210 MS.gene027785:CDS
GTCTCTTAAGAGGGAGAAGC+AGG 0.467286 5.2:-22161863 MS.gene027785:CDS
GCTGGTTGCAAAGTTGTTGA+AGG 0.470555 5.2:-22161955 MS.gene027785:CDS
TTCATCAATCACTCATGTAT+AGG 0.475254 5.2:-22165808 MS.gene027785:CDS
CACATACTTCTCCCTCTTTG+GGG 0.478433 5.2:+22165218 None:intergenic
GGTTCCAAAGAGGGTTGAAA+TGG 0.481754 5.2:-22163047 MS.gene027785:CDS
ACCAGACTTGTGAGCTAGCA+TGG 0.483849 5.2:+22165271 None:intergenic
TCATTTCTGTTGCAGGAAGT+TGG 0.487950 5.2:-22164381 MS.gene027785:intron
CACCCGAGACTCAGGTGGCT+GGG 0.489836 5.2:-22162044 MS.gene027785:CDS
CAGTATCATCTGAAGTAGTT+GGG 0.490528 5.2:+22163074 None:intergenic
CTTCGAGGGCTGCCAATGGC+CGG 0.490970 5.2:-22163202 MS.gene027785:CDS
ATGGCGGCTTTGCTGAAGCT+TGG 0.492064 5.2:-22166212 MS.gene027785:CDS
AAGTTGGCGTCAATGTTAAG+AGG 0.492222 5.2:-22164365 MS.gene027785:CDS
TATTTCTGAGCTTGCTGCAA+TGG 0.496708 5.2:-22164977 MS.gene027785:intron
TTGGTTGCAGTGACTTTACA+AGG 0.501046 5.2:+22165150 None:intergenic
GCATCTAGGTGCCTTTGTGG+TGG 0.501908 5.2:-22163818 MS.gene027785:CDS
GCATCTAGGTGCCTTTGTGG+TGG 0.501908 5.2:-22164199 MS.gene027785:CDS
CCCAGGTACACCCGAGACTC+AGG 0.503358 5.2:-22162052 MS.gene027785:CDS
AATGTTGTCCATGTTGGCGT+GGG 0.504531 5.2:-22162529 MS.gene027785:CDS
ATGCACCGCAAGCCTGTGCT+AGG 0.507826 5.2:+22162482 None:intergenic
TGTTGTTCATTCTGAGGAGC+GGG 0.508874 5.2:-22163167 MS.gene027785:CDS
TGATGTTGCAGCCAAAGCTC+TGG 0.509914 5.2:+22166007 None:intergenic
TGACAAAGGACGGGGTCCAT+TGG 0.510063 5.2:-22163371 MS.gene027785:CDS
AGGTGTGGCTGGTTATAGTA+GGG 0.511100 5.2:-22165788 MS.gene027785:CDS
ATCACATTTCTCGACACTCC+TGG 0.512405 5.2:-22163775 MS.gene027785:CDS
ATCACATTTCTCGACACTCC+TGG 0.512405 5.2:-22164156 MS.gene027785:CDS
TGAATATCTTTGAAGTGAAA+GGG 0.513439 5.2:-22162008 MS.gene027785:CDS
GACAACTTTGAATAGTCCTC+AGG 0.516512 5.2:-22162969 MS.gene027785:intron
CATCTAGGTGCCTTTGTGGT+GGG 0.518300 5.2:-22163817 MS.gene027785:CDS
CATCTAGGTGCCTTTGTGGT+GGG 0.518300 5.2:-22164198 MS.gene027785:CDS
TCTGTGAATGTTGTCCATGT+TGG 0.519196 5.2:-22162535 MS.gene027785:CDS
GCAATGCCTGTGGAGATTGA+AGG 0.520519 5.2:-22163226 MS.gene027785:CDS
TTGCTGTTAGAGGAGATGGG+TGG 0.521268 5.2:-22163538 MS.gene027785:CDS
TTGCTGTTAGAGGAGATGGG+TGG 0.521268 5.2:-22163919 MS.gene027785:CDS
AGCAACTCGTGCTAGTATCA+AGG 0.524569 5.2:-22162410 MS.gene027785:intron
AAAACGATAGAAATATTTGA+AGG 0.527056 5.2:-22165114 MS.gene027785:CDS
GCACTAAATGCAGCGTGACC+AGG 0.528840 5.2:+22163757 None:intergenic
GCACTAAATGCAGCGTGACC+AGG 0.528840 5.2:+22164138 None:intergenic
AGGGCTATTAAAGATGCAGC+AGG 0.529509 5.2:-22163274 MS.gene027785:CDS
TGGAGATTGAAGGGCTTCGA+GGG 0.531700 5.2:-22163216 MS.gene027785:CDS
CGAAGCCCTTCAATCTCCAC+AGG 0.532610 5.2:+22163220 None:intergenic
TAAGAGGGAGAAGCAGGATG+TGG 0.534191 5.2:-22161857 MS.gene027785:CDS
GCATCAGCAAGATGCATGGC+TGG 0.536350 5.2:-22165927 MS.gene027785:intron
GAAGCCCAAATTTATTAAGT+CGG 0.536909 5.2:-22161737 MS.gene027785:CDS
TCAGTGGCAGCCAAGGAAGC+TGG 0.538791 5.2:-22164234 MS.gene027785:CDS
ACCACTCCTTAGAAGCCTCA+TGG 0.539540 5.2:+22161912 None:intergenic
TCCTCCAGTTGTAACAGTGA+TGG 0.540721 5.2:-22164307 MS.gene027785:CDS
ACATCATGTAGGCATGTGGT+AGG 0.541362 5.2:-22165990 MS.gene027785:CDS
GCTTCTAAGGAGTGGTGAAA+TGG 0.543450 5.2:-22161905 MS.gene027785:CDS
AGCAAGACTTGACAAAGGAC+GGG 0.546869 5.2:-22163380 MS.gene027785:CDS
AGGGCTTCGAGGGCTGCCAA+TGG 0.550201 5.2:-22163206 MS.gene027785:CDS
TTTAGTGCCATGCGAGCAAG+AGG 0.552994 5.2:-22163742 MS.gene027785:CDS
TTTAGTGCCATGCGAGCAAG+AGG 0.552994 5.2:-22164123 MS.gene027785:CDS
TCAAACTTCAGTGGCAGCCA+AGG 0.555459 5.2:-22164241 MS.gene027785:CDS
GTGGAGCGTCAACAGGAGGC+TGG 0.557375 5.2:+22165178 None:intergenic
AAGCAAGACTTGACAAAGGA+CGG 0.557705 5.2:-22163381 MS.gene027785:CDS
GGACTAAAGAATGTGGAATA+CGG 0.557860 5.2:-22165765 MS.gene027785:intron
GGTGGCATTACTCAGCATCT+AGG 0.559213 5.2:-22163832 MS.gene027785:CDS
GGTGGCATTACTCAGCATCT+AGG 0.559213 5.2:-22164213 MS.gene027785:CDS
TGTGGTTGTAGGCTCGCAGT+GGG 0.559390 5.2:-22163305 MS.gene027785:CDS
AAAACTACAGCTTGCTTCAG+AGG 0.559700 5.2:-22163563 MS.gene027785:CDS
AAAACTACAGCTTGCTTCAG+AGG 0.559700 5.2:-22163944 MS.gene027785:CDS
ATGACATCGTCACCGGCCAT+TGG 0.561870 5.2:+22163190 None:intergenic
GGACCTGATGTGAAAATAGC+TGG 0.562195 5.2:-22161973 MS.gene027785:CDS
ACCTTGTTCGTCTCTTAAGA+GGG 0.563673 5.2:-22161872 MS.gene027785:CDS
TAATGCCACCAGCTTCCTCT+AGG 0.565060 5.2:+22163845 None:intergenic
TGTCATTGTTGTTCATTCTG+AGG 0.565978 5.2:-22163173 MS.gene027785:CDS
CAATGCCTGTGGAGATTGAA+GGG 0.566706 5.2:-22163225 MS.gene027785:CDS
AAGGCAGGAACTCTAGTTTG+TGG 0.566743 5.2:-22163334 MS.gene027785:CDS
TCAACCACATATGCTTGAGC+AGG 0.566940 5.2:+22163403 None:intergenic
ATTGTAAAAGGAGATGTTCA+GGG 0.570554 5.2:-22163019 MS.gene027785:CDS
CTGGATAACCTAGAGGAAGC+TGG 0.571928 5.2:-22163853 MS.gene027785:CDS
CCTCCAGTTGTAACAGTGAT+GGG 0.572114 5.2:-22164306 MS.gene027785:CDS
GATGTGGATTCTGTGAAGAA+AGG 0.574209 5.2:-22161841 MS.gene027785:CDS
GCTGTTAGAGGAGATGGGTG+GGG 0.576180 5.2:-22163536 MS.gene027785:CDS
GCTGTTAGAGGAGATGGGTG+GGG 0.576180 5.2:-22163917 MS.gene027785:CDS
AACAACAATGACATCGTCAC+CGG 0.576261 5.2:+22163183 None:intergenic
TTGATAATAGAGAAGGCCCC+AGG 0.576931 5.2:-22162069 MS.gene027785:CDS
TACTGAGGAGGTTCCAAAGA+GGG 0.576993 5.2:-22163056 MS.gene027785:CDS
AAGAGGTTACATTCAACTGA+AGG 0.577737 5.2:-22164348 MS.gene027785:CDS
AGCCAATTTGATAATAGAGA+AGG 0.578957 5.2:-22162076 MS.gene027785:CDS
ATCCGACGTGGACCTAGCAC+AGG 0.580355 5.2:-22162494 MS.gene027785:CDS
AAACTACAGCTTGCTTCAGA+GGG 0.580982 5.2:-22163562 MS.gene027785:CDS
AAACTACAGCTTGCTTCAGA+GGG 0.580982 5.2:-22163943 MS.gene027785:CDS
GAATGTTGTCCATGTTGGCG+TGG 0.582983 5.2:-22162530 MS.gene027785:CDS
GGCTTGCTGTTAGAGGAGAT+GGG 0.584783 5.2:-22163541 MS.gene027785:CDS
GGCTTGCTGTTAGAGGAGAT+GGG 0.584783 5.2:-22163922 MS.gene027785:CDS
TCAAGAAGTGATGCAGCGTA+TGG 0.585039 5.2:-22165249 MS.gene027785:CDS
TGGTCCTGCTCAAGCATATG+TGG 0.587486 5.2:-22163407 MS.gene027785:CDS
ACATACTTCTCCCTCTTTGG+GGG 0.587717 5.2:+22165219 None:intergenic
AGTGGTGAAATGGTGTTTGA+AGG 0.587901 5.2:-22161895 MS.gene027785:CDS
AACGCTTTGCCAGTTCAACA+AGG 0.589366 5.2:+22165085 None:intergenic
CTAGTTGTTGCTGCAGATGA+CGG 0.590753 5.2:-22163694 MS.gene027785:CDS
CTAGTTGTTGCTGCAGATGA+CGG 0.590753 5.2:-22164075 MS.gene027785:CDS
ATGTGGTTGTAGGCTCGCAG+TGG 0.591331 5.2:-22163306 MS.gene027785:CDS
CTGAGTCTCGGGTGTACCTG+GGG 0.593935 5.2:+22162053 None:intergenic
GTGACTACTATAGTGAAGGC+AGG 0.594123 5.2:-22163349 MS.gene027785:CDS
TTGACGCAAGGCATCAAGAA+GGG 0.594389 5.2:+22164260 None:intergenic
AAATTTATTAAGTCGGAGAG+TGG 0.594592 5.2:-22161730 MS.gene027785:CDS
TTGTTGTTCATTCTGAGGAG+CGG 0.596000 5.2:-22163168 MS.gene027785:CDS
GAAGGAGTAAAGCTTCCTCT+AGG 0.596889 5.2:+22163464 None:intergenic
AAATAGGCCCCACGCCAACA+TGG 0.597607 5.2:+22162521 None:intergenic
TGCCACTGAAGTTTGACGCA+AGG 0.603755 5.2:+22164248 None:intergenic
CTTTGGCTGCAACATCATGT+AGG 0.603843 5.2:-22166001 MS.gene027785:CDS
CCCATCACTGTTACAACTGG+AGG 0.604246 5.2:+22164306 None:intergenic
GATCCATCATATCAGCCTGA+AGG 0.609133 5.2:+22163446 None:intergenic
TTTGACGCAAGGCATCAAGA+AGG 0.613462 5.2:+22164259 None:intergenic
CCAATAGGTGGTAAATCACA+CGG 0.614579 5.2:+22162106 None:intergenic
GTCAATAAATGTGATAAACC+AGG 0.615284 5.2:-22163604 MS.gene027785:CDS
GTCAATAAATGTGATAAACC+AGG 0.615284 5.2:-22163985 MS.gene027785:CDS
TTTGAAGAGGACAGGCTTAG+GGG 0.616568 5.2:-22163112 MS.gene027785:CDS
TTCACTATAGTAGTCACCAA+TGG 0.618438 5.2:+22163355 None:intergenic
ACTGTTACAACTGGAGGACG+TGG 0.619466 5.2:+22164312 None:intergenic
TGGCTACGTCTTCCAATAGG+TGG 0.620759 5.2:+22162094 None:intergenic
CTAGAATGCTTAGTTCTGGT+AGG 0.622551 5.2:-22163144 MS.gene027785:CDS
TGCCTTGCGTCAAACTTCAG+TGG 0.625844 5.2:-22164250 MS.gene027785:CDS
CAATCACTCATGTATAGGTG+TGG 0.626934 5.2:-22165803 MS.gene027785:CDS
ATTGGTGACTACTATAGTGA+AGG 0.629654 5.2:-22163353 MS.gene027785:CDS
GTGATGGGTCATGTTGATCA+CGG 0.630061 5.2:-22164291 MS.gene027785:CDS
GTGAAAGGGAGCAAATCTAA+GGG 0.630238 5.2:-22161994 MS.gene027785:CDS
ACCATGAGGCTTCTAAGGAG+TGG 0.630459 5.2:-22161913 MS.gene027785:CDS
GACACAGCTTCAAGTGTTTG+GGG 0.635718 5.2:+22163664 None:intergenic
GACACAGCTTCAAGTGTTTG+GGG 0.635718 5.2:+22164045 None:intergenic
CATCATGTAGGCATGTGGTA+GGG 0.636284 5.2:-22165989 MS.gene027785:CDS
GTGGCAGCCAAGGAAGCTGG+TGG 0.636567 5.2:-22164231 MS.gene027785:CDS
AGCAACTCCAGCAATGCCTG+TGG 0.638181 5.2:-22163236 MS.gene027785:CDS
TCTAGTTTGTGGACAGCATG+TGG 0.640880 5.2:-22163323 MS.gene027785:CDS
GCCTATTTCTCAATCCGACG+TGG 0.644268 5.2:-22162506 MS.gene027785:CDS
ACGTGTGGAGCGTCAACAGG+AGG 0.644835 5.2:+22165174 None:intergenic
GTGAAGAAAGGAAATGAGTG+TGG 0.647644 5.2:-22161829 MS.gene027785:CDS
ACGCTTTGCCAGTTCAACAA+GGG 0.649253 5.2:+22165086 None:intergenic
TACTTCAGATGATACTGAGG+AGG 0.649683 5.2:-22163068 MS.gene027785:CDS
GTGTGGCTGGTTATAGTAGG+GGG 0.652719 5.2:-22165786 MS.gene027785:CDS
GTGACTTTACAAGGGACGTG+TGG 0.659103 5.2:+22165159 None:intergenic
AACTACTTCAGATGATACTG+AGG 0.662017 5.2:-22163071 MS.gene027785:CDS
TGATGACATGCCCACCACAA+AGG 0.668029 5.2:+22163807 None:intergenic
TGATGACATGCCCACCACAA+AGG 0.668029 5.2:+22164188 None:intergenic
GCAAGACTTGACAAAGGACG+GGG 0.668444 5.2:-22163379 MS.gene027785:CDS
TGAACAGGTCAGCAACCATG+AGG 0.674149 5.2:-22161927 MS.gene027785:CDS
TCCCTCTTAAGAGACGAACA+AGG 0.676356 5.2:+22161871 None:intergenic
AGGTACACCCGAGACTCAGG+TGG 0.677615 5.2:-22162049 MS.gene027785:CDS
GTGGACCTAGCACAGGCTTG+CGG 0.681130 5.2:-22162487 MS.gene027785:CDS
GGTGTGGCTGGTTATAGTAG+GGG 0.682056 5.2:-22165787 MS.gene027785:CDS
GACTGGACTGGATAACCTAG+AGG 0.686970 5.2:-22163479 MS.gene027785:CDS
GACTGGACTGGATAACCTAG+AGG 0.686970 5.2:-22163860 MS.gene027785:CDS
TGGTTGCAGTGACTTTACAA+GGG 0.689581 5.2:+22165151 None:intergenic
TTATGCATCAGCAAGATGCA+TGG 0.690151 5.2:-22165931 MS.gene027785:CDS
GCTTGGGTAAGAGAAATAGG+TGG 0.690336 5.2:+22162433 None:intergenic
AGCCTGTGCTAGGTCCACGT+CGG 0.697377 5.2:+22162492 None:intergenic
ATGTTGTCCATGTTGGCGTG+GGG 0.699834 5.2:-22162528 MS.gene027785:CDS
GGGCTATTAAAGATGCAGCA+GGG 0.703729 5.2:-22163273 MS.gene027785:CDS
TCAGAAATATCCATACTGAG+AGG 0.707747 5.2:+22164991 None:intergenic
TGCAACATCATGTAGGCATG+TGG 0.713220 5.2:-22165994 MS.gene027785:CDS
GTTGAAGCAAGACTTGACAA+AGG 0.724961 5.2:-22163385 MS.gene027785:CDS
ATACTGAGGAGGTTCCAAAG+AGG 0.728916 5.2:-22163057 MS.gene027785:CDS
CTATTAAAGATGCAGCAGGG+AGG 0.743526 5.2:-22163270 MS.gene027785:CDS
GATAACCTAGAGGAAGCTGG+TGG 0.745632 5.2:-22163850 MS.gene027785:CDS
GTGGTTGTAGGCTCGCAGTG+GGG 0.772193 5.2:-22163304 MS.gene027785:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAGAAAAAAAAAAAAAAAAA+AGG + chr5.2:22165213-22165232 None:intergenic 10.0%
!! AAAAAAAAAAAAAGGGAAAA+AGG + chr5.2:22165205-22165224 None:intergenic 15.0%
!! TGGTTATTATAACTATAATA+TGG - chr5.2:22164981-22165000 MS.gene027785:CDS 15.0%
!! TTTATTTATATCTCAACATT+TGG + chr5.2:22165273-22165292 None:intergenic 15.0%
!!! TTTACACAATTTAAAATGAA+AGG + chr5.2:22161771-22161790 None:intergenic 15.0%
!! AAAACGATAGAAATATTTGA+AGG - chr5.2:22162806-22162825 MS.gene027785:intron 20.0%
!! ACAAGTAAATATAAAACAGT+AGG - chr5.2:22165112-22165131 MS.gene027785:CDS 20.0%
!! AGCTATATACACTTTATTAT+AGG + chr5.2:22161832-22161851 None:intergenic 20.0%
!! ATTGTAGCATTATTATACTT+GGG - chr5.2:22163358-22163377 MS.gene027785:CDS 20.0%
!! ATTTCTATTTGATATCTGTT+TGG - chr5.2:22165767-22165786 MS.gene027785:CDS 20.0%
!! GAAATAAGGCAAAAAAAAAA+AGG + chr5.2:22163394-22163413 None:intergenic 20.0%
!! GCTAATAATACTGTAATAAA+TGG - chr5.2:22162444-22162463 MS.gene027785:CDS 20.0%
!! TAACAATGAAATTACAGAAT+GGG + chr5.2:22165361-22165380 None:intergenic 20.0%
!! TGATTACTCATAGTTAAATA+CGG + chr5.2:22165552-22165571 None:intergenic 20.0%
!!! AATATTTCTATCGTTTTATC+AGG + chr5.2:22162803-22162822 None:intergenic 20.0%
!!! GACTGAAAATTTTCAAATTT+AGG + chr5.2:22165642-22165661 None:intergenic 20.0%
!!! TAATTAGTTTTGTTTTACGT+TGG - chr5.2:22162617-22162636 MS.gene027785:intron 20.0%
!!! TTTTTAGTTGCTTTAGATAA+AGG - chr5.2:22163129-22163148 MS.gene027785:CDS 20.0%
!!! TTTTTTTTTTGCCTTATTTC+TGG - chr5.2:22163394-22163413 MS.gene027785:CDS 20.0%
! AAGTGACATAGTTGAAAATT+TGG - chr5.2:22162546-22162565 MS.gene027785:intron 25.0%
! AATAAGTAATCGATAGTACT+AGG - chr5.2:22163286-22163305 MS.gene027785:CDS 25.0%
! AATATGCATAGGAAAGTAAA+AGG - chr5.2:22163261-22163280 MS.gene027785:CDS 25.0%
! ACAAAGCAGTACATAAATTA+CGG + chr5.2:22162356-22162375 None:intergenic 25.0%
! ACAACAGATAGTGTATTAAT+CGG - chr5.2:22165072-22165091 MS.gene027785:CDS 25.0%
! AGATATGCATAAAATTACAG+AGG - chr5.2:22162309-22162328 MS.gene027785:intron 25.0%
! ATATGCATAGGAAAGTAAAA+GGG - chr5.2:22163262-22163281 MS.gene027785:CDS 25.0%
! CATTCTGTAATTTCATTGTT+AGG - chr5.2:22165360-22165379 MS.gene027785:intron 25.0%
! CATTGTAGCATTATTATACT+TGG - chr5.2:22163357-22163376 MS.gene027785:CDS 25.0%
! CTAACAATGAAATTACAGAA+TGG + chr5.2:22165362-22165381 None:intergenic 25.0%
! CTGCATTCAGATAATAAAAA+GGG + chr5.2:22161874-22161893 None:intergenic 25.0%
! GAATTAAAAGACGATTAAGA+AGG + chr5.2:22162974-22162993 None:intergenic 25.0%
! GATATGCATAAAATTACAGA+GGG - chr5.2:22162310-22162329 MS.gene027785:intron 25.0%
! GATTACTCATAGTTAAATAC+GGG + chr5.2:22165551-22165570 None:intergenic 25.0%
! GTATAATAATGCTACAATGA+TGG + chr5.2:22163356-22163375 None:intergenic 25.0%
! TAGGAAAAAGAAATTTGAAG+AGG - chr5.2:22164795-22164814 MS.gene027785:intron 25.0%
! TATTTGATATCTGTTTGGTT+TGG - chr5.2:22165772-22165791 MS.gene027785:CDS 25.0%
! TCTGCATTCAGATAATAAAA+AGG + chr5.2:22161875-22161894 None:intergenic 25.0%
!!! AATCACACAAATTTTAGCAT+TGG + chr5.2:22162511-22162530 None:intergenic 25.0%
!!! AATGTTTTGATGGAAATCAA+TGG - chr5.2:22163160-22163179 MS.gene027785:CDS 25.0%
!!! CTTTTCCTTAAATTGATAGT+TGG - chr5.2:22163196-22163215 MS.gene027785:CDS 25.0%
!!! GAACTACATGATGATTTTTT+AGG - chr5.2:22163476-22163495 MS.gene027785:CDS 25.0%
!!! TGAATATCTTTGAAGTGAAA+GGG - chr5.2:22165912-22165931 MS.gene027785:intron 25.0%
AAAAGAAATTTGAAGAGGAC+AGG - chr5.2:22164800-22164819 MS.gene027785:intron 30.0%
AAAATTTGTGTGATTGCACA+TGG - chr5.2:22162516-22162535 MS.gene027785:CDS 30.0%
AAAGGCTAACAAACAAGTAT+TGG + chr5.2:22162996-22163015 None:intergenic 30.0%
AAATTTATTAAGTCGGAGAG+TGG - chr5.2:22166190-22166209 MS.gene027785:intron 30.0%
AATACACTATCTGTTGTTGA+CGG + chr5.2:22165069-22165088 None:intergenic 30.0%
AATTGTAAAAGGAGATGTTC+AGG - chr5.2:22164900-22164919 MS.gene027785:intron 30.0%
AATTGTTAGCATTACAGGTT+AGG - chr5.2:22162214-22162233 MS.gene027785:intron 30.0%
ACTCTCCGACTTAATAAATT+TGG + chr5.2:22166191-22166210 None:intergenic 30.0%
AGTATACAATAAACAAGTGC+TGG + chr5.2:22162054-22162073 None:intergenic 30.0%
AGTTGACGTCTTATAATCTT+AGG + chr5.2:22165586-22165605 None:intergenic 30.0%
ATATCTCAACATTTGGACAA+AGG + chr5.2:22165266-22165285 None:intergenic 30.0%
ATTGTAAAAGGAGATGTTCA+GGG - chr5.2:22164901-22164920 MS.gene027785:intron 30.0%
CAATGCCAACTATCAATTTA+AGG + chr5.2:22163204-22163223 None:intergenic 30.0%
CTCTCCGACTTAATAAATTT+GGG + chr5.2:22166190-22166209 None:intergenic 30.0%
GAAAACAAATATCCACAAAC+AGG + chr5.2:22163504-22163523 None:intergenic 30.0%
GAAATGGCAGTAATTGTAAA+AGG - chr5.2:22164889-22164908 MS.gene027785:intron 30.0%
GAAGCCCAAATTTATTAAGT+CGG - chr5.2:22166183-22166202 MS.gene027785:intron 30.0%
GGTACTTATAAGTAAAAAGC+TGG - chr5.2:22162567-22162586 MS.gene027785:intron 30.0%
GTCAATAAATGTGATAAACC+AGG - chr5.2:22163935-22163954 MS.gene027785:CDS 30.0%
GTTGACGTCTTATAATCTTA+GGG + chr5.2:22165585-22165604 None:intergenic 30.0%
TAAGATCACATTAATCAGCA+TGG - chr5.2:22165165-22165184 MS.gene027785:CDS 30.0%
TCATAGTTAAATACGGGAAA+AGG + chr5.2:22165545-22165564 None:intergenic 30.0%
TCATGTAGTTCAAAACAAAG+AGG + chr5.2:22163467-22163486 None:intergenic 30.0%
TGAACAATTGTTAGCATTAC+AGG - chr5.2:22162209-22162228 MS.gene027785:intron 30.0%
TTCATCAATCACTCATGTAT+AGG - chr5.2:22162112-22162131 MS.gene027785:CDS 30.0%
! AACAAGCTGTCATTTACAAA+TGG + chr5.2:22163021-22163040 None:intergenic 30.0%
! AACTGTTGTGATTTTCAGAT+TGG - chr5.2:22166127-22166146 MS.gene027785:intron 30.0%
! AATTTGTTCATTTCTGTTGC+AGG - chr5.2:22163532-22163551 MS.gene027785:CDS 30.0%
! ACAAGCTGTCATTTACAAAT+GGG + chr5.2:22163020-22163039 None:intergenic 30.0%
! AGCCAATTTGATAATAGAGA+AGG - chr5.2:22165844-22165863 MS.gene027785:intron 30.0%
! CAATTTAAAATGAAAGGAGC+TGG + chr5.2:22161765-22161784 None:intergenic 30.0%
! CGTTTTATCAGGATTAGATT+TGG + chr5.2:22162792-22162811 None:intergenic 30.0%
! CTTAAATTGATAGTTGGCAT+TGG - chr5.2:22163202-22163221 MS.gene027785:CDS 30.0%
! TGTCATTTACAAATGGGAAA+AGG + chr5.2:22163014-22163033 None:intergenic 30.0%
! TTTGTAAATGACAGCTTGTT+AGG - chr5.2:22163021-22163040 MS.gene027785:CDS 30.0%
!! AGTTGATAGGTATACTACAT+CGG - chr5.2:22162377-22162396 MS.gene027785:intron 30.0%
!! CTGAATATCTTTGAAGTGAA+AGG - chr5.2:22165911-22165930 MS.gene027785:intron 30.0%
!! TACATTAGCTGATTTTGCAT+GGG + chr5.2:22163900-22163919 None:intergenic 30.0%
!! TTGTAAATGACAGCTTGTTA+GGG - chr5.2:22163022-22163041 MS.gene027785:CDS 30.0%
!!! AGCTGTAGTTTTACTTTTTC+AGG + chr5.2:22163968-22163987 None:intergenic 30.0%
!!! ATTTTTTAGGTTCCTGTTTG+TGG - chr5.2:22163489-22163508 MS.gene027785:CDS 30.0%
!!! TGAATTTTTCAAGCATCTCT+CGG - chr5.2:22162470-22162489 MS.gene027785:CDS 30.0%
AACTACTTCAGATGATACTG+AGG - chr5.2:22164849-22164868 MS.gene027785:intron 35.0%
AAGAGGTTACATTCAACTGA+AGG - chr5.2:22163572-22163591 MS.gene027785:CDS 35.0%
AGTGCTTAGAACAAGTAGTT+AGG - chr5.2:22166161-22166180 MS.gene027785:intron 35.0%
ATAAAATTACAGAGGGATGG+GGG - chr5.2:22162317-22162336 MS.gene027785:intron 35.0%
ATATTGTGCCTTACGACAAA+TGG + chr5.2:22163246-22163265 None:intergenic 35.0%
ATTACAGGTTAGGTGGTTTA+AGG - chr5.2:22162224-22162243 MS.gene027785:intron 35.0%
CAAGATATTCTCACAACTGT+TGG - chr5.2:22162881-22162900 MS.gene027785:intron 35.0%
CATAAAATTACAGAGGGATG+GGG - chr5.2:22162316-22162335 MS.gene027785:intron 35.0%
GAGAGATGCTTGAAAAATTC+AGG + chr5.2:22162471-22162490 None:intergenic 35.0%
GAGTCAATGATCCAGAAATA+AGG + chr5.2:22163408-22163427 None:intergenic 35.0%
GATCTTAAAGCACGATTTGA+TGG - chr5.2:22164493-22164512 MS.gene027785:intron 35.0%
GCATAAAATTACAGAGGGAT+GGG - chr5.2:22162315-22162334 MS.gene027785:intron 35.0%
GGACTAAAGAATGTGGAATA+CGG - chr5.2:22162155-22162174 MS.gene027785:intron 35.0%
GGCCTTCTCTATTATCAAAT+TGG + chr5.2:22165849-22165868 None:intergenic 35.0%
TAATAACCATCACATACCTG+AGG + chr5.2:22164970-22164989 None:intergenic 35.0%
TATGAACTTTACCAGAGCTT+TGG - chr5.2:22161902-22161921 MS.gene027785:CDS 35.0%
TATTGTGCCTTACGACAAAT+GGG + chr5.2:22163245-22163264 None:intergenic 35.0%
TCAGAAATATCCATACTGAG+AGG + chr5.2:22162932-22162951 None:intergenic 35.0%
TGATTGATGAAATCTGCATC+AGG + chr5.2:22162103-22162122 None:intergenic 35.0%
TGCATAAAATTACAGAGGGA+TGG - chr5.2:22162314-22162333 MS.gene027785:intron 35.0%
TGTAGTTCAAAACAAAGAGG+AGG + chr5.2:22163464-22163483 None:intergenic 35.0%
TTAAGGATGACAGCATCATT+TGG - chr5.2:22162241-22162260 MS.gene027785:intron 35.0%
TTCACTATAGTAGTCACCAA+TGG + chr5.2:22164568-22164587 None:intergenic 35.0%
! ATTGGTGACTACTATAGTGA+AGG - chr5.2:22164567-22164586 MS.gene027785:intron 35.0%
! CAGTATCATCTGAAGTAGTT+GGG + chr5.2:22164849-22164868 None:intergenic 35.0%
! TCAGTATCATCTGAAGTAGT+TGG + chr5.2:22164850-22164869 None:intergenic 35.0%
! TGTCATTGTTGTTCATTCTG+AGG - chr5.2:22164747-22164766 MS.gene027785:intron 35.0%
! TTATTGACTGCAACTACAAC+TGG + chr5.2:22163923-22163942 None:intergenic 35.0%
!! GATATCTGTTTGGTTTGGTT+TGG - chr5.2:22165777-22165796 MS.gene027785:CDS 35.0%
!! GTACATTAGCTGATTTTGCA+TGG + chr5.2:22163901-22163920 None:intergenic 35.0%
!! TTGTTGAAGGTTTTGTGAAC+AGG - chr5.2:22165978-22165997 MS.gene027785:CDS 35.0%
!!! TAGTTTTGTTTTACGTTGGC+AGG - chr5.2:22162621-22162640 MS.gene027785:intron 35.0%
AAATAAAACCCCCTGCAACA+TGG + chr5.2:22161807-22161826 None:intergenic 40.0%
AACAACAATGACATCGTCAC+CGG + chr5.2:22164740-22164759 None:intergenic 40.0%
AAGCAAGACTTGACAAAGGA+CGG - chr5.2:22164539-22164558 MS.gene027785:intron 40.0%
AAGTTGGCGTCAATGTTAAG+AGG - chr5.2:22163555-22163574 MS.gene027785:CDS 40.0%
AATAGTCCTCAGGTATGTGA+TGG - chr5.2:22164961-22164980 MS.gene027785:intron 40.0%
AATTGGCTACGTCTTCCAAT+AGG + chr5.2:22165832-22165851 None:intergenic 40.0%
AATTTGAAGAGGACAGGCTT+AGG - chr5.2:22164806-22164825 MS.gene027785:intron 40.0%
ACAATTATCCATGTTGCAGG+GGG - chr5.2:22161796-22161815 MS.gene027785:CDS 40.0%
ACCACAATTATCCATGTTGC+AGG - chr5.2:22161793-22161812 MS.gene027785:CDS 40.0%
ACCTTGTTCGTCTCTTAAGA+GGG - chr5.2:22166048-22166067 MS.gene027785:intron 40.0%
AGTACTCCTGATTGGTAGAT+TGG - chr5.2:22162404-22162423 MS.gene027785:intron 40.0%
AGTGAAAGGGAGCAAATCTA+AGG - chr5.2:22165925-22165944 MS.gene027785:intron 40.0%
AGTGGTGAAATGGTGTTTGA+AGG - chr5.2:22166025-22166044 MS.gene027785:CDS 40.0%
AGTTCAAAACAAAGAGGAGG+AGG + chr5.2:22163461-22163480 None:intergenic 40.0%
ATTGTGCCTTACGACAAATG+GGG + chr5.2:22163244-22163263 None:intergenic 40.0%
ATTTGAAGAGGACAGGCTTA+GGG - chr5.2:22164807-22164826 MS.gene027785:intron 40.0%
CAATCACTCATGTATAGGTG+TGG - chr5.2:22162117-22162136 MS.gene027785:CDS 40.0%
CACAATTATCCATGTTGCAG+GGG - chr5.2:22161795-22161814 MS.gene027785:CDS 40.0%
CCAATAGGTGGTAAATCACA+CGG + chr5.2:22165817-22165836 None:intergenic 40.0%
CCACAATTATCCATGTTGCA+GGG - chr5.2:22161794-22161813 MS.gene027785:CDS 40.0%
GACAACTTTGAATAGTCCTC+AGG - chr5.2:22164951-22164970 MS.gene027785:intron 40.0%
GATGTGGATTCTGTGAAGAA+AGG - chr5.2:22166079-22166098 MS.gene027785:intron 40.0%
GTACTCCTGATTGGTAGATT+GGG - chr5.2:22162405-22162424 MS.gene027785:intron 40.0%
GTGAAAGGGAGCAAATCTAA+GGG - chr5.2:22165926-22165945 MS.gene027785:intron 40.0%
GTGAAGAAAGGAAATGAGTG+TGG - chr5.2:22166091-22166110 MS.gene027785:intron 40.0%
GTTCAAAACAAAGAGGAGGA+GGG + chr5.2:22163460-22163479 None:intergenic 40.0%
GTTGAAGCAAGACTTGACAA+AGG - chr5.2:22164535-22164554 MS.gene027785:intron 40.0%
TACTTCAGATGATACTGAGG+AGG - chr5.2:22164852-22164871 MS.gene027785:intron 40.0%
TCACATACTTCTCCCTCTTT+GGG + chr5.2:22162706-22162725 None:intergenic 40.0%
TCATTTCTGTTGCAGGAAGT+TGG - chr5.2:22163539-22163558 MS.gene027785:CDS 40.0%
TCGGTAATAGTACTCCTGAT+TGG - chr5.2:22162396-22162415 MS.gene027785:intron 40.0%
TCGTAAGGCACAATATGCAT+AGG - chr5.2:22163250-22163269 MS.gene027785:CDS 40.0%
TCTGTGAATGTTGTCCATGT+TGG - chr5.2:22165385-22165404 MS.gene027785:intron 40.0%
TGGTTGCAGTGACTTTACAA+GGG + chr5.2:22162772-22162791 None:intergenic 40.0%
TGTTAGCATTACAGGTTAGG+TGG - chr5.2:22162217-22162236 MS.gene027785:intron 40.0%
TTATGCATCAGCAAGATGCA+TGG - chr5.2:22161989-22162008 MS.gene027785:CDS 40.0%
TTCAAAACAAAGAGGAGGAG+GGG + chr5.2:22163459-22163478 None:intergenic 40.0%
TTGGTTGCAGTGACTTTACA+AGG + chr5.2:22162773-22162792 None:intergenic 40.0%
TTGTCTCATTCTGCTTCACT+TGG - chr5.2:22163074-22163093 MS.gene027785:CDS 40.0%
TTTGCTGAAGCTTGGAAAGA+AGG - chr5.2:22161716-22161735 MS.gene027785:CDS 40.0%
! AAAACTACAGCTTGCTTCAG+AGG - chr5.2:22163976-22163995 MS.gene027785:CDS 40.0%
! AAACTACAGCTTGCTTCAGA+GGG - chr5.2:22163977-22163996 MS.gene027785:CDS 40.0%
! AGGGAGAAGTATGTGAGAAA+AGG - chr5.2:22162710-22162729 MS.gene027785:intron 40.0%
! TTGTTGTTCATTCTGAGGAG+CGG - chr5.2:22164752-22164771 MS.gene027785:intron 40.0%
!! CAACCAGCTATTTTCACATC+AGG + chr5.2:22165953-22165972 None:intergenic 40.0%
!! CTAGAATGCTTAGTTCTGGT+AGG - chr5.2:22164776-22164795 MS.gene027785:intron 40.0%
!! GTACTGCTTTGTGAGTTGAT+AGG - chr5.2:22162364-22162383 MS.gene027785:intron 40.0%
!! TATTTCTGAGCTTGCTGCAA+TGG - chr5.2:22162943-22162962 MS.gene027785:intron 40.0%
!! TCTGTTTGGTTTGGTTTGGT+AGG - chr5.2:22165781-22165800 MS.gene027785:CDS 40.0%
!!! ACTTTTTCAGGATTTGCACC+TGG + chr5.2:22163956-22163975 None:intergenic 40.0%
AACCTACCTACCAAGACTCT+AGG + chr5.2:22163312-22163331 None:intergenic 45.0%
AACGCTTTGCCAGTTCAACA+AGG + chr5.2:22162838-22162857 None:intergenic 45.0%
AATGTTGTCCATGTTGGCGT+GGG - chr5.2:22165391-22165410 MS.gene027785:intron 45.0%
ACAAAGAACAAGGACGTGGA+AGG - chr5.2:22165043-22165062 MS.gene027785:CDS 45.0%
ACATACTTCTCCCTCTTTGG+GGG + chr5.2:22162704-22162723 None:intergenic 45.0%
ACATCATGTAGGCATGTGGT+AGG - chr5.2:22161930-22161949 MS.gene027785:CDS 45.0%
ACGCTTTGCCAGTTCAACAA+GGG + chr5.2:22162837-22162856 None:intergenic 45.0%
ACTCCTTCAGGCTGATATGA+TGG - chr5.2:22164471-22164490 MS.gene027785:intron 45.0%
AGAGGAAGCTTTACTCCTTC+AGG - chr5.2:22164459-22164478 MS.gene027785:intron 45.0%
AGAGTCTTGGTAGGTAGGTT+TGG - chr5.2:22163312-22163331 MS.gene027785:CDS 45.0%
AGAGTTTGAGCCTCTCAGTA+TGG - chr5.2:22162919-22162938 MS.gene027785:intron 45.0%
AGCAACTCGTGCTAGTATCA+AGG - chr5.2:22165510-22165529 MS.gene027785:intron 45.0%
AGCAAGACTTGACAAAGGAC+GGG - chr5.2:22164540-22164559 MS.gene027785:intron 45.0%
AGCATCATTTGGCCTATGCA+TGG - chr5.2:22162252-22162271 MS.gene027785:intron 45.0%
AGGGCTATTAAAGATGCAGC+AGG - chr5.2:22164646-22164665 MS.gene027785:intron 45.0%
AGTAGGGGGACTAAAGAATG+TGG - chr5.2:22162148-22162167 MS.gene027785:intron 45.0%
ATACTGAGGAGGTTCCAAAG+AGG - chr5.2:22164863-22164882 MS.gene027785:intron 45.0%
ATCACATTTCTCGACACTCC+TGG - chr5.2:22163764-22163783 MS.gene027785:CDS 45.0%
CAATGCCTGTGGAGATTGAA+GGG - chr5.2:22164695-22164714 MS.gene027785:intron 45.0%
CACATACTTCTCCCTCTTTG+GGG + chr5.2:22162705-22162724 None:intergenic 45.0%
CATCATGTAGGCATGTGGTA+GGG - chr5.2:22161931-22161950 MS.gene027785:CDS 45.0%
CCCTGCAACATGGATAATTG+TGG + chr5.2:22161797-22161816 None:intergenic 45.0%
CCGTGTGATTTACCACCTAT+TGG - chr5.2:22165814-22165833 MS.gene027785:intron 45.0%
CCTCCAGTTGTAACAGTGAT+GGG - chr5.2:22163614-22163633 MS.gene027785:CDS 45.0%
CCTGATTGGTAGATTGGGTT+GGG - chr5.2:22162410-22162429 MS.gene027785:intron 45.0%
CTAGTTGTTGCTGCAGATGA+CGG - chr5.2:22163845-22163864 MS.gene027785:CDS 45.0%
CTATTAAAGATGCAGCAGGG+AGG - chr5.2:22164650-22164669 MS.gene027785:intron 45.0%
CTCACATACTTCTCCCTCTT+TGG + chr5.2:22162707-22162726 None:intergenic 45.0%
CTCGCAGTGGGGAAAAATAA+GGG - chr5.2:22164627-22164646 MS.gene027785:intron 45.0%
CTGCTTCACTTGGAGCATAT+AGG - chr5.2:22163084-22163103 MS.gene027785:CDS 45.0%
CTTTGGCTGCAACATCATGT+AGG - chr5.2:22161919-22161938 MS.gene027785:CDS 45.0%
GAAGGAGTAAAGCTTCCTCT+AGG + chr5.2:22164459-22164478 None:intergenic 45.0%
GACACAGCTTCAAGTGTTTG+GGG + chr5.2:22163878-22163897 None:intergenic 45.0%
GACCTTGTTCGTCTCTTAAG+AGG - chr5.2:22166047-22166066 MS.gene027785:intron 45.0%
GAGTCTTGGTAGGTAGGTTT+GGG - chr5.2:22163313-22163332 MS.gene027785:CDS 45.0%
GATCCATCATATCAGCCTGA+AGG + chr5.2:22164477-22164496 None:intergenic 45.0%
GCTGCTTGGGTAAGAGAAAT+AGG + chr5.2:22165493-22165512 None:intergenic 45.0%
GCTGGTTGCAAAGTTGTTGA+AGG - chr5.2:22165965-22165984 MS.gene027785:CDS 45.0%
GCTTGGGTAAGAGAAATAGG+TGG + chr5.2:22165490-22165509 None:intergenic 45.0%
GGACACAGCTTCAAGTGTTT+GGG + chr5.2:22163879-22163898 None:intergenic 45.0%
GGACCTGATGTGAAAATAGC+TGG - chr5.2:22165947-22165966 MS.gene027785:CDS 45.0%
GGGCTATTAAAGATGCAGCA+GGG - chr5.2:22164647-22164666 MS.gene027785:intron 45.0%
GGTTCCAAAGAGGGTTGAAA+TGG - chr5.2:22164873-22164892 MS.gene027785:intron 45.0%
GTGACTACTATAGTGAAGGC+AGG - chr5.2:22164571-22164590 MS.gene027785:intron 45.0%
GTTTCCGCGCTTAAAAAGAC+TGG - chr5.2:22164043-22164062 MS.gene027785:CDS 45.0%
TACTGAGGAGGTTCCAAAGA+GGG - chr5.2:22164864-22164883 MS.gene027785:intron 45.0%
TAGTACTAGGCCTAGAGTCT+TGG - chr5.2:22163299-22163318 MS.gene027785:CDS 45.0%
TCAAAACAAAGAGGAGGAGG+GGG + chr5.2:22163458-22163477 None:intergenic 45.0%
TCAACCACATATGCTTGAGC+AGG + chr5.2:22164520-22164539 None:intergenic 45.0%
TCAAGAAGTGATGCAGCGTA+TGG - chr5.2:22162671-22162690 MS.gene027785:intron 45.0%
TCCACGTCGGATTGAGAAAT+AGG + chr5.2:22165418-22165437 None:intergenic 45.0%
TCCCTCTTAAGAGACGAACA+AGG + chr5.2:22166052-22166071 None:intergenic 45.0%
TCCTCCAGTTGTAACAGTGA+TGG - chr5.2:22163613-22163632 MS.gene027785:CDS 45.0%
TCCTGATTGGTAGATTGGGT+TGG - chr5.2:22162409-22162428 MS.gene027785:intron 45.0%
TGACCCATCACTGTTACAAC+TGG + chr5.2:22163620-22163639 None:intergenic 45.0%
TGCAACATCATGTAGGCATG+TGG - chr5.2:22161926-22161945 MS.gene027785:CDS 45.0%
TTTGAAGAGGACAGGCTTAG+GGG - chr5.2:22164808-22164827 MS.gene027785:intron 45.0%
! AAGGCAGGAACTCTAGTTTG+TGG - chr5.2:22164586-22164605 MS.gene027785:intron 45.0%
! ACTGCCATTTCAACCCTCTT+TGG + chr5.2:22164880-22164899 None:intergenic 45.0%
! AGGTGTGGCTGGTTATAGTA+GGG - chr5.2:22162132-22162151 MS.gene027785:intron 45.0%
! GCTTCTAAGGAGTGGTGAAA+TGG - chr5.2:22166015-22166034 MS.gene027785:CDS 45.0%
! TAGGTGTGGCTGGTTATAGT+AGG - chr5.2:22162131-22162150 MS.gene027785:intron 45.0%
! TCTAGTTTGTGGACAGCATG+TGG - chr5.2:22164597-22164616 MS.gene027785:intron 45.0%
! TGTTGTTCATTCTGAGGAGC+GGG - chr5.2:22164753-22164772 MS.gene027785:intron 45.0%
! TTGACGCAAGGCATCAAGAA+GGG + chr5.2:22163663-22163682 None:intergenic 45.0%
! TTGATAATAGAGAAGGCCCC+AGG - chr5.2:22165851-22165870 MS.gene027785:intron 45.0%
! TTTGACGCAAGGCATCAAGA+AGG + chr5.2:22163664-22163683 None:intergenic 45.0%
!! CAGTCCAGTCTTTTTAAGCG+CGG + chr5.2:22164050-22164069 None:intergenic 45.0%
!! GGCTGCTAGCAATGTTTTGA+TGG - chr5.2:22163150-22163169 MS.gene027785:CDS 45.0%
!! GTGATGGGTCATGTTGATCA+CGG - chr5.2:22163629-22163648 MS.gene027785:CDS 45.0%
!! AGAAAAAAAAAAAAAAAAAA+GGG + chr5.2:22165212-22165231 None:intergenic 5.0%
!!! TATTTTTATTAATAAAATTC+AGG - chr5.2:22165666-22165685 MS.gene027785:intron 5.0%
AAAACAAAGAGGAGGAGGGG+GGG + chr5.2:22163456-22163475 None:intergenic 50.0%
ACCACTCCTTAGAAGCCTCA+TGG + chr5.2:22166011-22166030 None:intergenic 50.0%
ACCAGACTTGTGAGCTAGCA+TGG + chr5.2:22162652-22162671 None:intergenic 50.0%
ACTAGGCCTAGAGTCTTGGT+AGG - chr5.2:22163303-22163322 MS.gene027785:CDS 50.0%
ACTGTTACAACTGGAGGACG+TGG + chr5.2:22163611-22163630 None:intergenic 50.0%
AGGCATGACCCTTGTTGAAC+TGG - chr5.2:22162826-22162845 MS.gene027785:intron 50.0%
AGTAATGCCACCAGCTTCCT+TGG + chr5.2:22163699-22163718 None:intergenic 50.0%
ATGTTGTCCATGTTGGCGTG+GGG - chr5.2:22165392-22165411 MS.gene027785:intron 50.0%
CAAAACAAAGAGGAGGAGGG+GGG + chr5.2:22163457-22163476 None:intergenic 50.0%
CACGTCCTTGTTCTTTGTGC+GGG + chr5.2:22165041-22165060 None:intergenic 50.0%
CACTCATGTATAGGTGTGGC+TGG - chr5.2:22162121-22162140 MS.gene027785:intron 50.0%
CAGCAACCATGAGGCTTCTA+AGG - chr5.2:22166002-22166021 MS.gene027785:CDS 50.0%
CATCTAGGTGCCTTTGTGGT+GGG - chr5.2:22163722-22163741 MS.gene027785:CDS 50.0%
CCACGTCCTTGTTCTTTGTG+CGG + chr5.2:22165042-22165061 None:intergenic 50.0%
CCCAACCCAATCTACCAATC+AGG + chr5.2:22162413-22162432 None:intergenic 50.0%
CCCATCACTGTTACAACTGG+AGG + chr5.2:22163617-22163636 None:intergenic 50.0%
CGCGCTTAAAAAGACTGGAC+TGG - chr5.2:22164048-22164067 MS.gene027785:CDS 50.0%
CTGGATAACCTAGAGGAAGC+TGG - chr5.2:22164067-22164086 MS.gene027785:CDS 50.0%
GAATGTTGTCCATGTTGGCG+TGG - chr5.2:22165390-22165409 MS.gene027785:intron 50.0%
GATAACCTAGAGGAAGCTGG+TGG - chr5.2:22164070-22164089 MS.gene027785:CDS 50.0%
GCAAGACTTGACAAAGGACG+GGG - chr5.2:22164541-22164560 MS.gene027785:intron 50.0%
GCAATGCCTGTGGAGATTGA+AGG - chr5.2:22164694-22164713 MS.gene027785:intron 50.0%
GCATCTCCCCATTTGTCGTA+AGG - chr5.2:22163235-22163254 MS.gene027785:CDS 50.0%
GCTCGCAGTGGGGAAAAATA+AGG - chr5.2:22164626-22164645 MS.gene027785:intron 50.0%
GGGACACAGCTTCAAGTGTT+TGG + chr5.2:22163880-22163899 None:intergenic 50.0%
GGTGGCATTACTCAGCATCT+AGG - chr5.2:22163707-22163726 MS.gene027785:CDS 50.0%
GTCTCTTAAGAGGGAGAAGC+AGG - chr5.2:22166057-22166076 MS.gene027785:intron 50.0%
GTGACTTTACAAGGGACGTG+TGG + chr5.2:22162764-22162783 None:intergenic 50.0%
TAAGAGGGAGAAGCAGGATG+TGG - chr5.2:22166063-22166082 MS.gene027785:intron 50.0%
TAATGCCACCAGCTTCCTCT+AGG + chr5.2:22164078-22164097 None:intergenic 50.0%
TACTAGCACGAGTTGCTGCT+TGG + chr5.2:22165507-22165526 None:intergenic 50.0%
TAGCCCTACTCACCATGCAT+AGG + chr5.2:22162267-22162286 None:intergenic 50.0%
TATGCATGGTGAGTAGGGCT+AGG - chr5.2:22162266-22162285 MS.gene027785:intron 50.0%
TCAAACTTCAGTGGCAGCCA+AGG - chr5.2:22163679-22163698 MS.gene027785:CDS 50.0%
TCAGCATCTAGGTGCCTTTG+TGG - chr5.2:22163718-22163737 MS.gene027785:CDS 50.0%
TCCATGCTAGCTCACAAGTC+TGG - chr5.2:22162648-22162667 MS.gene027785:intron 50.0%
TGAACAGGTCAGCAACCATG+AGG - chr5.2:22165993-22166012 MS.gene027785:CDS 50.0%
TGATGACATGCCCACCACAA+AGG + chr5.2:22163735-22163754 None:intergenic 50.0%
TGATGTTGCAGCCAAAGCTC+TGG + chr5.2:22161916-22161935 None:intergenic 50.0%
TGCCACTGAAGTTTGACGCA+AGG + chr5.2:22163675-22163694 None:intergenic 50.0%
TGCCTTGCGTCAAACTTCAG+TGG - chr5.2:22163670-22163689 MS.gene027785:CDS 50.0%
TGCTGTTAGAGGAGATGGGT+GGG - chr5.2:22164002-22164021 MS.gene027785:CDS 50.0%
TGGAGATTGAAGGGCTTCGA+GGG - chr5.2:22164704-22164723 MS.gene027785:intron 50.0%
TGGCCTATGCATGGTGAGTA+GGG - chr5.2:22162261-22162280 MS.gene027785:intron 50.0%
TGGCTACGTCTTCCAATAGG+TGG + chr5.2:22165829-22165848 None:intergenic 50.0%
TGGTCCTGCTCAAGCATATG+TGG - chr5.2:22164513-22164532 MS.gene027785:intron 50.0%
TGTGGACAGCATGTGGTTGT+AGG - chr5.2:22164604-22164623 MS.gene027785:intron 50.0%
TTGGCCTATGCATGGTGAGT+AGG - chr5.2:22162260-22162279 MS.gene027785:intron 50.0%
TTTAGTGCCATGCGAGCAAG+AGG - chr5.2:22163797-22163816 MS.gene027785:CDS 50.0%
! ACCATGAGGCTTCTAAGGAG+TGG - chr5.2:22166007-22166026 MS.gene027785:CDS 50.0%
! ACTAGCACGAGTTGCTGCTT+GGG + chr5.2:22165506-22165525 None:intergenic 50.0%
! ATGGTTTGAAGCCCCCAAAG+AGG - chr5.2:22162690-22162709 MS.gene027785:intron 50.0%
! CGGGCTAGAATGCTTAGTTC+TGG - chr5.2:22164772-22164791 MS.gene027785:intron 50.0%
! GACTGGACTGGATAACCTAG+AGG - chr5.2:22164060-22164079 MS.gene027785:CDS 50.0%
! GCCTATTTCTCAATCCGACG+TGG - chr5.2:22165414-22165433 MS.gene027785:intron 50.0%
! GGTGTGGCTGGTTATAGTAG+GGG - chr5.2:22162133-22162152 MS.gene027785:intron 50.0%
! GTGTGGCTGGTTATAGTAGG+GGG - chr5.2:22162134-22162153 MS.gene027785:intron 50.0%
! GTTGAACTGGCAAAGCGTTC+TGG - chr5.2:22162839-22162858 MS.gene027785:intron 50.0%
! TCAATCTCCACAGGCATTGC+TGG + chr5.2:22164694-22164713 None:intergenic 50.0%
! TGGTTTGAAGCCCCCAAAGA+GGG - chr5.2:22162691-22162710 MS.gene027785:intron 50.0%
! TTGCTGTTAGAGGAGATGGG+TGG - chr5.2:22164001-22164020 MS.gene027785:CDS 50.0%
!! GGCTTGCTGTTAGAGGAGAT+GGG - chr5.2:22163998-22164017 MS.gene027785:CDS 50.0%
!! TTCAGAGGGCTTGCTGTTAG+AGG - chr5.2:22163991-22164010 MS.gene027785:CDS 50.0%
!! TTTGTGGTGGGCATGTCATC+AGG - chr5.2:22163734-22163753 MS.gene027785:CDS 50.0%
AAATAGGCCCCACGCCAACA+TGG + chr5.2:22165402-22165421 None:intergenic 55.0%
AGCAACTCCAGCAATGCCTG+TGG - chr5.2:22164684-22164703 MS.gene027785:intron 55.0%
ATGACATCGTCACCGGCCAT+TGG + chr5.2:22164733-22164752 None:intergenic 55.0%
ATGGCGGCTTTGCTGAAGCT+TGG - chr5.2:22161708-22161727 MS.gene027785:CDS 55.0%
ATGTGGTTGTAGGCTCGCAG+TGG - chr5.2:22164614-22164633 MS.gene027785:intron 55.0%
CCGCACAAAGAACAAGGACG+TGG - chr5.2:22165039-22165058 MS.gene027785:CDS 55.0%
CGAAGCCCTTCAATCTCCAC+AGG + chr5.2:22164703-22164722 None:intergenic 55.0%
GCACTAAATGCAGCGTGACC+AGG + chr5.2:22163785-22163804 None:intergenic 55.0%
GCATCAGCAAGATGCATGGC+TGG - chr5.2:22161993-22162012 MS.gene027785:CDS 55.0%
GCATCTAGGTGCCTTTGTGG+TGG - chr5.2:22163721-22163740 MS.gene027785:CDS 55.0%
GCTCACCCGCACAAAGAACA+AGG - chr5.2:22165033-22165052 MS.gene027785:CDS 55.0%
GCTGTTAGAGGAGATGGGTG+GGG - chr5.2:22164003-22164022 MS.gene027785:CDS 55.0%
GCTTGCGGTGCATGCATAGT+TGG - chr5.2:22165448-22165467 MS.gene027785:intron 55.0%
GGAGATGGGTGGGGATATTC+AGG - chr5.2:22164012-22164031 MS.gene027785:CDS 55.0%
GGCCTAGAGTCTTGGTAGGT+AGG - chr5.2:22163307-22163326 MS.gene027785:CDS 55.0%
GTGGAGATTGAAGGGCTTCG+AGG - chr5.2:22164703-22164722 MS.gene027785:intron 55.0%
TGACAAAGGACGGGGTCCAT+TGG - chr5.2:22164549-22164568 MS.gene027785:intron 55.0%
TGTGGTTGTAGGCTCGCAGT+GGG - chr5.2:22164615-22164634 MS.gene027785:intron 55.0%
!! GGGCTTGCTGTTAGAGGAGA+TGG - chr5.2:22163997-22164016 MS.gene027785:CDS 55.0%
!!! GGGATGGGGGCACTTTTAAG+AGG - chr5.2:22162330-22162349 MS.gene027785:intron 55.0%
AAAGAGGAGGAGGGGGGGAT+TGG + chr5.2:22163451-22163470 None:intergenic 60.0%
ACCTGAGTCTCGGGTGTACC+TGG + chr5.2:22165872-22165891 None:intergenic 60.0%
AGCCTGTGCTAGGTCCACGT+CGG + chr5.2:22165431-22165450 None:intergenic 60.0%
AGGTACACCCGAGACTCAGG+TGG - chr5.2:22165871-22165890 MS.gene027785:intron 60.0%
ATCCGACGTGGACCTAGCAC+AGG - chr5.2:22165426-22165445 MS.gene027785:intron 60.0%
ATGCACCGCAAGCCTGTGCT+AGG + chr5.2:22165441-22165460 None:intergenic 60.0%
CCTGAGTCTCGGGTGTACCT+GGG + chr5.2:22165871-22165890 None:intergenic 60.0%
CTGAGTCTCGGGTGTACCTG+GGG + chr5.2:22165870-22165889 None:intergenic 60.0%
GTGGACCTAGCACAGGCTTG+CGG - chr5.2:22165433-22165452 MS.gene027785:intron 60.0%
GTGGTTGTAGGCTCGCAGTG+GGG - chr5.2:22164616-22164635 MS.gene027785:intron 60.0%
TCAGTGGCAGCCAAGGAAGC+TGG - chr5.2:22163686-22163705 MS.gene027785:CDS 60.0%
TGCTGCACCTCTTGCTCGCA+TGG + chr5.2:22163807-22163826 None:intergenic 60.0%
TTGCCCAGCCACCTGAGTCT+CGG + chr5.2:22165882-22165901 None:intergenic 60.0%
! ACGTGTGGAGCGTCAACAGG+AGG + chr5.2:22162749-22162768 None:intergenic 60.0%
ACACCCGAGACTCAGGTGGC+TGG - chr5.2:22165875-22165894 MS.gene027785:intron 65.0%
AGGAGGGGGGGATTGGAGAG+TGG + chr5.2:22163444-22163463 None:intergenic 65.0%
AGGGCTTCGAGGGCTGCCAA+TGG - chr5.2:22164714-22164733 MS.gene027785:intron 65.0%
AGGGGGGGATTGGAGAGTGG+CGG + chr5.2:22163441-22163460 None:intergenic 65.0%
CACCCGAGACTCAGGTGGCT+GGG - chr5.2:22165876-22165895 MS.gene027785:intron 65.0%
CCCAGGTACACCCGAGACTC+AGG - chr5.2:22165868-22165887 MS.gene027785:intron 65.0%
CTTCGAGGGCTGCCAATGGC+CGG - chr5.2:22164718-22164737 MS.gene027785:intron 65.0%
GTGGCAGCCAAGGAAGCTGG+TGG - chr5.2:22163689-22163708 MS.gene027785:CDS 65.0%
TGCCCAGCCACCTGAGTCTC+GGG + chr5.2:22165881-22165900 None:intergenic 65.0%
! GGGACGTGTGGAGCGTCAAC+AGG + chr5.2:22162752-22162771 None:intergenic 65.0%
! GTGGAGCGTCAACAGGAGGC+TGG + chr5.2:22162745-22162764 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 22161708 22166234 22161708 ID=MS.gene027785
chr5.2 mRNA 22161708 22166234 22161708 ID=MS.gene027785.t1;Parent=MS.gene027785
chr5.2 exon 22166205 22166234 22166205 ID=MS.gene027785.t1.exon1;Parent=MS.gene027785.t1
chr5.2 CDS 22166205 22166234 22166205 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22165928 22166048 22165928 ID=MS.gene027785.t1.exon2;Parent=MS.gene027785.t1
chr5.2 CDS 22165928 22166048 22165928 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22165766 22165832 22165766 ID=MS.gene027785.t1.exon3;Parent=MS.gene027785.t1
chr5.2 CDS 22165766 22165832 22165766 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22164978 22165299 22164978 ID=MS.gene027785.t1.exon4;Parent=MS.gene027785.t1
chr5.2 CDS 22164978 22165299 22164978 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22162970 22164388 22162970 ID=MS.gene027785.t1.exon5;Parent=MS.gene027785.t1
chr5.2 CDS 22162970 22164388 22162970 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22162411 22162560 22162411 ID=MS.gene027785.t1.exon6;Parent=MS.gene027785.t1
chr5.2 CDS 22162411 22162560 22162411 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
chr5.2 exon 22161708 22162139 22161708 ID=MS.gene027785.t1.exon7;Parent=MS.gene027785.t1
chr5.2 CDS 22161708 22162139 22161708 ID=cds.MS.gene027785.t1;Parent=MS.gene027785.t1
Gene Sequence

>MS.gene027785

ATGGCGGCTTTGCTGAAGCTTGGAAAGAAGGTAAGTTGACTTTTATAATAAGCACCAGCTCCTTTCATTTTAAATTGTGTAAAATACCACAATTATCCATGTTGCAGGGGGTTTTATTTTTCCTATAATAAAGTGTATATAGCTCATTAAGTTTCTGATAATACCCTTTTTATTATCTGAATGCAGAGAATATATATGAACTTTACCAGAGCTTTGGCTGCAACATCATGTAGGCATGTGGTAGGGTCAAGTTTTGCATCTATATTTGCTTCACAATCTGTTTATGCATCAGCAAGATGCATGGCTGGTAATTGACGTCATTTATGCTTATAGTGTTTCAGTTCCAGCACTTGTTTATTGTATACTATTATACTTACACGTACTTCACATTACCTGATGCAGATTTCATCAATCACTCATGTATAGGTGTGGCTGGTTATAGTAGGGGGACTAAAGAATGTGGAATACGGTGAGATAGTACTCAAATTTCAAGTTTTAAAATGAACAATTGTTAGCATTACAGGTTAGGTGGTTTAAGGATGACAGCATCATTTGGCCTATGCATGGTGAGTAGGGCTAGGAGAAGTTAGTTTACTTTTAAAGATATGCATAAAATTACAGAGGGATGGGGGCACTTTTAAGAGGCCGTAATTTATGTACTGCTTTGTGAGTTGATAGGTATACTACATCGGTAATAGTACTCCTGATTGGTAGATTGGGTTGGGTTTTTTTACATGCTAATAATACTGTAATAAATGGTCCTGAATTTTTCAAGCATCTCTCGGCTGTAGACGAAAATGCCAATGCTAAAATTTGTGTGATTGCACATGGAAGAAAGAAGTGACATAGTTGAAAATTTGGTACTTATAAGTAAAAAGCTGGACAATTGTAAAAACAAAAAGCTAGATGTAATTAGTTTTGTTTTACGTTGGCAGGTGCTTCCATGCTAGCTCACAAGTCTGGTCAAGAAGTGATGCAGCGTATGGTTTGAAGCCCCCAAAGAGGGAGAAGTATGTGAGAAAAGGCAGTAGAAACCAGCCTCCTGTTGACGCTCCACACGTCCCTTGTAAAGTCACTGCAACCAAATCTAATCCTGATAAAACGATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGTTCTGGAAAATCAGTATCTTCTTTGCAAGATATTCTCACAACTGTTGGTGAAAAAATTCAATCAGAGTTTGAGCCTCTCAGTATGGATATTTCTGAGCTTGCTGCAATGGTATATCCTTCTTAATCGTCTTTTAATTCCAATACTTGTTTGTTAGCCTTTTCCCATTTGTAAATGACAGCTTGTTAGGGAAAAAAATATTTTGCTCATACTCTACTCATTGTCTCATTCTGCTTCACTTGGAGCATATAGGATTCAAAATTATCTTTAATAATTTTTTAGTTGCTTTAGATAAAGGCTGCTAGCAATGTTTTGATGGAAATCAATGGAGTTTGAGATATACTTTTCCTTAAATTGATAGTTGGCATTGGTAGATTTTGTGCATCTCCCCATTTGTCGTAAGGCACAATATGCATAGGAAAGTAAAAGGGAAATAAGTAATCGATAGTACTAGGCCTAGAGTCTTGGTAGGTAGGTTTGGGAAATATTTAGTTTCAATCCATCATTGTAGCATTATTATACTTGGGTATTCTTACACCTTTTTTTTTTTGCCTTATTTCTGGATCATTGACTCACAAGTGTCTCCGCCACTCTCCAATCCCCCCCTCCTCCTCTTTGTTTTGAACTACATGATGATTTTTTAGGTTCCTGTTTGTGGATATTTGTTTTCTTTCACTTAATTTGTTCATTTCTGTTGCAGGAAGTTGGCGTCAATGTTAAGAGGTTACATTCAACTGAAGGTAAAGAAGTTTTACCACGTCCTCCAGTTGTAACAGTGATGGGTCATGTTGATCACGGAAAAACTTCCCTTCTTGATGCCTTGCGTCAAACTTCAGTGGCAGCCAAGGAAGCTGGTGGCATTACTCAGCATCTAGGTGCCTTTGTGGTGGGCATGTCATCAGGAGCATCAATCACATTTCTCGACACTCCTGGTCACGCTGCATTTAGTGCCATGCGAGCAAGAGGTGCAGCAGTCACAGATATAGTAGTGCTAGTTGTTGCTGCAGATGACGGTGTAATGCCCCAAACACTTGAAGCTGTGTCCCATGCAAAATCAGCTAATGTACCAGTTGTAGTTGCAGTCAATAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTAAAACTACAGCTTGCTTCAGAGGGCTTGCTGTTAGAGGAGATGGGTGGGGATATTCAGGTTGTTGAAGTTTCCGCGCTTAAAAAGACTGGACTGGATAACCTAGAGGAAGCTGGTGGCATTACTCAGCATCTAGGTGCCTTTGTGGTGGGCATGTCATCAGGAGCATCAATCACATTTCTCGACACTCCTGGTCACGCTGCATTTAGTGCCATGCGAGCAAGAGGTGCAGCAGTCACAGATATAGTAGTGCTAGTTGTTGCTGCAGATGACGGTGTAATGCCCCAAACACTTGAAGCTGTGTCCCATGCAAAATCAGCTAATGTACCAGTTGTAGTTGCAGTCAATAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTAAAACTACAGCTTGCTTCAGAGGGCTTGCTGTTAGAGGAGATGGGTGGGGATATTCAGGTTGTTGAAGTTTCCGCGCTTAAAAAGACTGGACTGGATAACCTAGAGGAAGCTTTACTCCTTCAGGCTGATATGATGGATCTTAAAGCACGATTTGATGGTCCTGCTCAAGCATATGTGGTTGAAGCAAGACTTGACAAAGGACGGGGTCCATTGGTGACTACTATAGTGAAGGCAGGAACTCTAGTTTGTGGACAGCATGTGGTTGTAGGCTCGCAGTGGGGAAAAATAAGGGCTATTAAAGATGCAGCAGGGAGGTTAACTCAACGAGCAACTCCAGCAATGCCTGTGGAGATTGAAGGGCTTCGAGGGCTGCCAATGGCCGGTGACGATGTCATTGTTGTTCATTCTGAGGAGCGGGCTAGAATGCTTAGTTCTGGTAGGAAAAAGAAATTTGAAGAGGACAGGCTTAGGGGTAAGATAGTGCATGTCCCAACTACTTCAGATGATACTGAGGAGGTTCCAAAGAGGGTTGAAATGGCAGTAATTGTAAAAGGAGATGTTCAGGGAACTGTTCAAGCTGTTACAGATGCATTGACAACTTTGAATAGTCCTCAGGTATGTGATGGTTATTATAACTATAATATGGTAAACTTTTCTTTTTGCATACACGCACATGCTCACCCGCACAAAGAACAAGGACGTGGAAGGCCGTCAACAACAGATAGTGTATTAATCGGAAATTATTACATCAGTTACAAGTAAATATAAAACAGTAGGTTTTAAACATAAGTGTTTGTGATATTTAACTAAGATCACATTAATCAGCATGGATGTATGAGCTTAACCTTTTTCCCTTTTTTTTTTTTTTTTTTCTGTTGAAGCATGTTTGATCAAGTTATTATTAGCCTTTGTCCAAATGTTGAGATATAAATAAAAATTCTGATAAGTTTAGTGTTGTTTTATTAATATTTTATTTGCTATTTGTTGCTATATAAAATAACCCATTCTGTAATTTCATTGTTAGGTTTCTGTGAATGTTGTCCATGTTGGCGTGGGGCCTATTTCTCAATCCGACGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTCAAGAGTCCACCTATTTCTCTTACCCAAGCAGCAACTCGTGCTAGTATCAAGGTATTTTAAGCCTTTTCCCGTATTTAACTATGAGTAATCACTGATTTAGTCCCTAAGATTATAAGACGTCAACTTAATCTCTGAAATTAGCGAAGTTTCAAAATATTCCTAAATTTGAAAATTTTCAGTCACATTATTTTTATTAATAAAATTCAGGTACTGAGTTGACGCCTTACAATTTTAAAGACTATATTGGTGATTTACTCATTTAGCTATTTAGTGATTGAAATTTTTAATTTCTATTTGATATCTGTTTGGTTTGGTTTGGTAGGTAATTATGCACCGTGTGATTTACCACCTATTGGAAGACGTAGCCAATTTGATAATAGAGAAGGCCCCAGGTACACCCGAGACTCAGGTGGCTGGGCAAGCAGAAGTGCTGAATATCTTTGAAGTGAAAGGGAGCAAATCTAAGGGACCTGATGTGAAAATAGCTGGTTGCAAAGTTGTTGAAGGTTTTGTGAACAGGTCAGCAACCATGAGGCTTCTAAGGAGTGGTGAAATGGTGTTTGAAGGACCTTGTTCGTCTCTTAAGAGGGAGAAGCAGGATGTGGATTCTGTGAAGAAAGGAAATGAGTGTGGACTAGTAATCAGTAACTGTTGTGATTTTCAGATTGGTGATGTTATACAGTGCTTAGAACAAGTAGTTAGGAAGCCCAAATTTATTAAGTCGGAGAGTGGTGCTGTTCGAATAGAGTGCTGA
Protein sequence

>MS.gene027785.t1

MAALLKLGKKRIYMNFTRALAATSCRHVVGSSFASIFASQSVYASARCMADFINHSCIGVAGYSRGTKECGIRCFHASSQVWSRSDAAYGLKPPKREKYVRKGSRNQPPVDAPHVPCKVTATKSNPDKTIEIFEGMTLVELAKRSGKSVSSLQDILTTVGEKIQSEFEPLSMDISELAAMEVGVNVKRLHSTEGKEVLPRPPVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAVSHAKSANVPVVVAVNKCDKPGANPEKVKLQLASEGLLLEEMGGDIQVVEVSALKKTGLDNLEEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAVSHAKSANVPVVVAVNKCDKPGANPEKVKLQLASEGLLLEEMGGDIQVVEVSALKKTGLDNLEEALLLQADMMDLKARFDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQHVVVGSQWGKIRAIKDAAGRLTQRATPAMPVEIEGLRGLPMAGDDVIVVHSEERARMLSSGRKKKFEEDRLRGKIVHVPTTSDDTEEVPKRVEMAVIVKGDVQGTVQAVTDALTTLNSPQVSVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPISLTQAATRASIKVIMHRVIYHLLEDVANLIIEKAPGTPETQVAGQAEVLNIFEVKGSKSKGPDVKIAGCKVVEGFVNRSATMRLLRSGEMVFEGPCSSLKREKQDVDSVKKGNECGLVISNCCDFQIGDVIQCLEQVVRKPKFIKSESGAVRIEC