AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52738

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52738.t1 MTR_7g094460 99.111 450 3 1 1 450 1 449 0.0 909
MS.gene52738.t1 MTR_2g021300 79.263 434 83 1 17 450 10 436 0.0 712
MS.gene52738.t1 MTR_3g076660 61.039 462 145 7 5 449 45 488 2.27e-175 500
MS.gene52738.t1 MTR_3g072130 66.524 233 55 3 219 450 101 311 1.85e-98 298
MS.gene52738.t1 MTR_3g072130 59.615 104 34 3 18 121 6 101 8.24e-21 93.2
MS.gene52738.t1 MTR_1g095703 30.137 438 246 14 60 448 3 429 9.05e-46 165
MS.gene52738.t1 MTR_1g495705 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene52738.t1 MTR_1g095650 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene52738.t1 MTR_6g021800 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene52738.t1 MTR_6g021805 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene52738.t1 MTR_4g014810 29.909 438 247 14 60 448 3 429 2.69e-45 163
MS.gene52738.t1 MTR_1g085410 30.345 435 243 14 60 445 3 426 4.27e-42 155
MS.gene52738.t1 MTR_1g013680 29.864 442 245 16 60 448 3 432 9.81e-41 151
MS.gene52738.t1 MTR_1g024175 28.899 436 256 14 59 448 2 429 1.17e-37 143
MS.gene52738.t1 MTR_1g101870 29.748 437 248 16 58 448 1 424 1.28e-37 146
MS.gene52738.t1 MTR_1g101870 29.977 437 247 17 58 448 1 424 1.48e-37 146
MS.gene52738.t1 MTR_8g087950 29.545 440 248 16 61 449 272 700 3.54e-37 144
MS.gene52738.t1 MTR_8g087950 29.545 440 248 16 61 449 345 773 5.87e-37 144
MS.gene52738.t1 MTR_2g082730 30.162 431 234 18 61 445 4 413 3.72e-34 134
MS.gene52738.t1 MTR_8g014590 27.945 433 254 12 65 448 8 431 4.28e-33 130
MS.gene52738.t1 MTR_8g008740 31.056 322 183 9 58 348 1 314 7.37e-32 127
MS.gene52738.t1 MTR_5g037350 27.177 379 229 15 102 445 107 473 4.23e-27 114
MS.gene52738.t1 MTR_8g106700 27.455 448 239 18 62 446 50 474 5.49e-27 113
MS.gene52738.t1 MTR_8g106700 27.455 448 239 18 62 446 44 468 5.73e-27 113
MS.gene52738.t1 MTR_1g095650 28.909 339 196 13 144 448 1 328 1.25e-26 110
MS.gene52738.t1 MTR_8g106700 27.455 448 239 18 62 446 71 495 1.29e-26 112
MS.gene52738.t1 MTR_6g080420 27.765 443 244 18 62 446 89 513 1.31e-26 112
MS.gene52738.t1 MTR_2g082665 28.438 429 218 18 61 445 4 387 3.95e-25 108
MS.gene52738.t1 MTR_2g080210 32.828 198 106 6 62 235 7 201 1.22e-23 103
MS.gene52738.t1 MTR_2g037420 25.346 434 237 16 58 448 1 390 6.25e-23 101
MS.gene52738.t1 MTR_4g079360 30.100 299 187 9 17 300 4 295 3.02e-21 97.1
MS.gene52738.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 8.62e-18 85.9
MS.gene52738.t1 MTR_8g013910 25.982 331 188 10 60 352 3 314 1.89e-17 84.7
MS.gene52738.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 2.08e-17 85.1
MS.gene52738.t1 MTR_1g101880 32.667 150 73 3 65 189 8 154 2.14e-17 82.4
MS.gene52738.t1 MTR_2g069440 23.810 525 259 20 20 443 142 626 1.48e-15 79.3
MS.gene52738.t1 MTR_2g075870 27.083 288 125 11 65 299 33 288 2.64e-15 78.2
MS.gene52738.t1 MTR_2g069440 26.207 290 125 11 65 299 33 288 4.25e-15 77.4
MS.gene52738.t1 MTR_1g024165 31.159 138 73 3 65 180 12 149 9.67e-14 68.9
MS.gene52738.t1 MTR_3g097250 28.571 245 142 8 66 301 85 305 9.61e-13 70.9
MS.gene52738.t1 MTR_2g064840 29.386 228 138 6 70 297 502 706 1.12e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52738.t1 AT4G02930 85.463 454 57 5 4 450 3 454 0.0 748
MS.gene52738.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene52738.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene52738.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07920 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT1G07930 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene52738.t1 AT5G10630 28.035 453 256 14 52 449 227 664 1.11e-33 134
MS.gene52738.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene52738.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene52738.t1 AT5G10630 28.035 453 256 14 52 449 303 740 1.22e-33 134
MS.gene52738.t1 AT5G10630 28.035 453 256 14 52 449 298 735 1.41e-33 134
MS.gene52738.t1 AT1G07930 33.721 258 135 7 60 286 3 255 1.07e-32 127
MS.gene52738.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene52738.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene52738.t1 AT1G18070 26.293 464 243 19 62 450 99 538 6.41e-26 110
MS.gene52738.t1 AT2G31060 31.707 287 167 9 66 333 61 337 1.91e-21 97.8
MS.gene52738.t1 AT2G31060 31.615 291 166 10 66 333 61 341 6.34e-21 96.3
MS.gene52738.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene52738.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene52738.t1 AT4G18330 26.549 339 182 12 65 353 40 361 2.14e-18 87.8
MS.gene52738.t1 AT4G18330 28.455 246 129 9 65 280 40 268 8.27e-16 78.2
MS.gene52738.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene52738.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene52738.t1 AT5G13650 25.150 334 223 11 29 350 48 366 7.64e-15 77.4
MS.gene52738.t1 AT2G18720 26.923 260 155 9 116 353 21 267 1.05e-14 75.9
MS.gene52738.t1 AT5G13650 25.926 297 194 10 66 350 85 367 2.34e-14 75.9
MS.gene52738.t1 AT5G08650 30.126 239 138 9 66 297 88 304 6.05e-13 71.2
MS.gene52738.t1 AT5G08650 30.126 239 138 9 66 297 88 304 7.62e-13 71.2

Find 103 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCCAGAAAATGTTAAAA+TGG 0.264941 7.2:-15169184 MS.gene52738:CDS
GAACAAGGAATCATCAAAAT+TGG 0.282024 7.2:-15169992 MS.gene52738:CDS
TGAAGATGTATTCTCAATTC+AGG 0.301803 7.2:-15170392 MS.gene52738:intron
GTTGTTAGAGCTTGTAGAAA+TGG 0.312590 7.2:-15170744 MS.gene52738:CDS
AAACCTTACTTTAACATAAT+CGG 0.325466 7.2:+15172211 None:intergenic
CATGTTAACGTCGGAACTAT+TGG 0.338907 7.2:-15172796 MS.gene52738:CDS
CAAGGATACCACCGTCCATT+TGG 0.339574 7.2:+15170996 None:intergenic
TTGACCTTCTACAAGTTTCC+AGG 0.348867 7.2:-15170571 MS.gene52738:CDS
CCTCTGAAAACAACAGTTAC+TGG 0.352891 7.2:-15169704 MS.gene52738:CDS
TGCTCTTTAGTTTGAGGCAT+TGG 0.362727 7.2:+15170953 None:intergenic
ATTCTTCCTCCTCCATTCCT+TGG 0.362758 7.2:-15172938 MS.gene52738:CDS
AATGCTGAACCTCTAATGAT+AGG 0.371728 7.2:+15170538 None:intergenic
TGGTGATGAAGTTGAGGTTT+TGG 0.379753 7.2:-15169972 MS.gene52738:CDS
AATTGAGAATACATCTTCAA+TGG 0.404677 7.2:+15170396 None:intergenic
TCAAGCTGGCGAACAGGGTC+AGG 0.406901 7.2:+15170436 None:intergenic
GTTTGAGGCATTGGTCCATC+AGG 0.416974 7.2:+15170962 None:intergenic
AGAATGTGCTCTTTAGTTTG+AGG 0.417591 7.2:+15170947 None:intergenic
CAAGGTACAAATGAGGAGAT+TGG 0.421220 7.2:-15170505 MS.gene52738:CDS
GTGAGAGGTGATTGAGAAAT+CGG 0.424813 7.2:+15172975 None:intergenic
TATCTCTGCTTCAAATCTCT+TGG 0.432334 7.2:+15169308 None:intergenic
CTTCCTCCTCCATTCCTTGG+TGG 0.434975 7.2:-15172935 MS.gene52738:CDS
TTAACATAATCGGCGTGTCC+AGG 0.444989 7.2:+15172221 None:intergenic
CGACCTGGTTCAAGTGGAAC+AGG 0.446547 7.2:+15169117 None:intergenic
CACTAACTGCTGCAATCACC+AGG 0.446674 7.2:-15172750 MS.gene52738:CDS
AAGGATACCACCGTCCATTT+GGG 0.446849 7.2:+15170997 None:intergenic
GATGATATCCCTATCATTAG+AGG 0.453307 7.2:-15170547 MS.gene52738:CDS
CAAAATTGGTGATGAAGTTG+AGG 0.481713 7.2:-15169978 MS.gene52738:CDS
TGAAGACATTCAACGTGGTC+AGG 0.482701 7.2:-15169525 MS.gene52738:intron
GATTACTGGAGCTGCCCAAA+TGG 0.484093 7.2:-15171011 MS.gene52738:CDS
TGTGGAATTGAGAGGAGAAG+AGG 0.484183 7.2:+15173015 None:intergenic
AATGTTAAAATGGTTATGCC+TGG 0.486949 7.2:-15169174 MS.gene52738:CDS
GCAAAGATTTGCCTTGAGAG+AGG 0.493777 7.2:-15168898 MS.gene52738:CDS
AAATGAGGAGATTGGAAGAA+AGG 0.499059 7.2:-15170497 MS.gene52738:CDS
TTGTAGGTGCTTGCTGATGA+AGG 0.509437 7.2:-15172610 MS.gene52738:intron
TCAGCATTGTCTGCTTTACA+AGG 0.510440 7.2:-15170523 MS.gene52738:CDS
CATTCCTTGGTGGAGATCCA+TGG 0.511576 7.2:-15172925 MS.gene52738:CDS
GGCGTTTGATGAAATTGATA+AGG 0.515289 7.2:-15172572 MS.gene52738:CDS
ATGCTGAACCTCTAATGATA+GGG 0.516366 7.2:+15170539 None:intergenic
ATCCCCTGGAAACTTGTAGA+AGG 0.518821 7.2:+15170567 None:intergenic
ATTGAGAATACATCTTCAAT+GGG 0.521499 7.2:+15170397 None:intergenic
TGAGATGTTCAAGAAGATGT+TGG 0.521796 7.2:-15169678 MS.gene52738:CDS
TCTTCAATGGGCATCAAGAA+AGG 0.524319 7.2:+15170409 None:intergenic
CTTGTTGTATCTGCACCTGA+TGG 0.528400 7.2:-15170977 MS.gene52738:CDS
ACTATTGGACACGTGGATCA+CGG 0.528486 7.2:-15172781 MS.gene52738:CDS
CTCCTGAAGAGAAGAAAAGA+GGG 0.530043 7.2:-15172549 MS.gene52738:CDS
AGAGAGGGTGGCAGAACAGT+TGG 0.536414 7.2:-15168882 MS.gene52738:CDS
TTCAAGAAGATGTTGGATCA+AGG 0.539587 7.2:-15169671 MS.gene52738:CDS
GAAGATGTTGGATCAAGGAC+AGG 0.545197 7.2:-15169666 MS.gene52738:intron
ATATGTACTCACAAAGGATG+AGG 0.545850 7.2:-15169286 MS.gene52738:CDS
TCTACAAGCTCTAACAACTC+TGG 0.547509 7.2:+15170749 None:intergenic
CAGAACAGTTGGTGCAGGTG+TGG 0.550692 7.2:-15168871 MS.gene52738:CDS
GCTCCTGAAGAGAAGAAAAG+AGG 0.558794 7.2:-15172550 MS.gene52738:CDS
TTGAGGACTGCTGATGTCAC+CGG 0.560650 7.2:-15169216 MS.gene52738:CDS
CAAAGATTTGCCTTGAGAGA+GGG 0.560920 7.2:-15168897 MS.gene52738:CDS
GGTGGCAGAACAGTTGGTGC+AGG 0.561816 7.2:-15168876 MS.gene52738:CDS
TATGCTCATGTTGACTGCCC+TGG 0.562571 7.2:-15172239 MS.gene52738:CDS
GGACGAGGAACAGTTGCTAC+TGG 0.563419 7.2:-15170022 MS.gene52738:CDS
TGTTCTGCCACCCTCTCTCA+AGG 0.564153 7.2:+15168887 None:intergenic
TGACCTTCTACAAGTTTCCA+GGG 0.568787 7.2:-15170570 MS.gene52738:CDS
TAACATAATCGGCGTGTCCA+GGG 0.569650 7.2:+15172222 None:intergenic
GTGCCTGTTCCACTTGAACC+AGG 0.570193 7.2:-15169120 MS.gene52738:intron
CGTTCTGGTGAAAGTAGCCA+TGG 0.573938 7.2:+15172908 None:intergenic
GAGAGAAGTGTGGAATTGAG+AGG 0.576888 7.2:+15173007 None:intergenic
GGAAGAATGAGTAGCGTCAT+CGG 0.581580 7.2:+15172953 None:intergenic
TACTCACAAAGGATGAGGGT+GGG 0.581890 7.2:-15169281 MS.gene52738:CDS
TTGAGTATGAGACTGCGAAA+AGG 0.587605 7.2:-15172265 MS.gene52738:CDS
TTGTAGGCCGGTGATAATGT+TGG 0.587725 7.2:-15169572 MS.gene52738:intron
AATTGAGAGGAGAAGAGGAA+AGG 0.587918 7.2:+15173020 None:intergenic
CATGGATCTCCACCAAGGAA+TGG 0.590261 7.2:+15172926 None:intergenic
AAGAGGGATTACGATTGCTA+CGG 0.594013 7.2:-15172533 MS.gene52738:intron
GTCAGGAATGTATTCATCAA+CGG 0.597205 7.2:+15170453 None:intergenic
GAAAAGGTCATTGCTAAACC+CGG 0.597744 7.2:-15169345 MS.gene52738:intron
ATATACCGACCTGGTTCAAG+TGG 0.599617 7.2:+15169111 None:intergenic
GCTACTGGTCGTGTTGAACA+AGG 0.600283 7.2:-15170007 MS.gene52738:CDS
TGTAGGTGCTTGCTGATGAA+GGG 0.600394 7.2:-15172609 MS.gene52738:intron
CGTCGGAACTATTGGACACG+TGG 0.600647 7.2:-15172788 MS.gene52738:CDS
TGTCTTCACGTTTCAGACCA+CGG 0.601798 7.2:+15169540 None:intergenic
AGATTTGCCTTGAGAGAGGG+TGG 0.603839 7.2:-15168894 MS.gene52738:CDS
TGCTTTACAAGGTACAAATG+AGG 0.604944 7.2:-15170512 MS.gene52738:CDS
ATGATAGGGATATCATCCCC+TGG 0.605677 7.2:+15170553 None:intergenic
AAGAAGACCAACATTATCAC+CGG 0.614685 7.2:+15169565 None:intergenic
GGTGATTGCAGCAGTTAGTG+TGG 0.615191 7.2:+15172753 None:intergenic
ACAGCAGTAACATTGTCTCC+AGG 0.616998 7.2:+15169156 None:intergenic
ACTGGAGCTGCCCAAATGGA+CGG 0.617245 7.2:-15171007 MS.gene52738:CDS
TCTCCACCAAGGAATGGAGG+AGG 0.620202 7.2:+15172932 None:intergenic
GGATCTCCACCAAGGAATGG+AGG 0.622567 7.2:+15172929 None:intergenic
CATCAGGTGCAGATACAACA+AGG 0.636841 7.2:+15170978 None:intergenic
GACCTTCTACAAGTTTCCAG+GGG 0.639890 7.2:-15170569 MS.gene52738:CDS
TATGTACTCACAAAGGATGA+GGG 0.639988 7.2:-15169285 MS.gene52738:CDS
TGAGTAGCGTCATCGGTGAG+AGG 0.643356 7.2:+15172960 None:intergenic
AATGTTGGTCTTCTTCTCCG+TGG 0.651935 7.2:-15169557 MS.gene52738:CDS
AGAGATATATGTACTCACAA+AGG 0.660869 7.2:-15169292 MS.gene52738:CDS
GTACTCACAAAGGATGAGGG+TGG 0.668081 7.2:-15169282 MS.gene52738:CDS
GTGAACGAGTGAGAGAAGTG+TGG 0.678699 7.2:+15172997 None:intergenic
ATAGTTCCGACGTTAACATG+AGG 0.685603 7.2:+15172799 None:intergenic
GCAGTCCTCAAGTAAAACTG+AGG 0.704069 7.2:+15169228 None:intergenic
CTTGTAGAAATGGAGCTCCG+TGG 0.705529 7.2:-15170734 MS.gene52738:intron
TGAAGGGAAAGCAAAAGCTG+TGG 0.710762 7.2:-15172593 MS.gene52738:CDS
AGAAAGCCTCATGTTAACGT+CGG 0.718585 7.2:-15172805 MS.gene52738:CDS
ACTAACTGCTGCAATCACCA+GGG 0.718624 7.2:-15172749 MS.gene52738:intron
GGAGCTGCCCAAATGGACGG+TGG 0.721733 7.2:-15171004 MS.gene52738:CDS
GTAGCCATGGATCTCCACCA+AGG 0.736526 7.2:+15172921 None:intergenic
AAACGTGAAGACATTCAACG+TGG 0.815986 7.2:-15169530 MS.gene52738:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATTATTTTTTTTA+AGG - chr7.2:15171875-15171894 MS.gene52738:intron 0.0%
!!! TTTTTAATTATTTTTTTTAA+GGG - chr7.2:15171876-15171895 MS.gene52738:intron 0.0%
!! ATTATTTAATAAATGCATAA+CGG + chr7.2:15170868-15170887 None:intergenic 10.0%
!! TTTAATTATAAATAATCCTT+GGG + chr7.2:15169981-15170000 None:intergenic 10.0%
!!! AAGGTATTAAAAAAATAAAA+AGG - chr7.2:15170645-15170664 MS.gene52738:intron 10.0%
!!! TTAAAAACTCATTAATTTTT+AGG + chr7.2:15170373-15170392 None:intergenic 10.0%
!!! TTTTAATACCTTATATATTA+TGG + chr7.2:15170637-15170656 None:intergenic 10.0%
!! AATTCTAACCATAATATATA+AGG - chr7.2:15170626-15170645 MS.gene52738:intron 15.0%
!! ATCATAAACAATACATTTAT+TGG + chr7.2:15169752-15169771 None:intergenic 15.0%
!! CAAGGATTATTTATAATTAA+AGG - chr7.2:15169980-15169999 MS.gene52738:CDS 15.0%
!! CTTTAATTATAAATAATCCT+TGG + chr7.2:15169982-15170001 None:intergenic 15.0%
!! TAGTGTATATTAAACTAATA+TGG - chr7.2:15172313-15172332 MS.gene52738:intron 15.0%
!! TATTAAAATTGAAAATGCAA+AGG - chr7.2:15170568-15170587 MS.gene52738:CDS 15.0%
!!! ATTAATGTTTTATTCTTGTT+TGG - chr7.2:15172101-15172120 MS.gene52738:intron 15.0%
!!! GATTTGATTAAGTTTTATTT+TGG - chr7.2:15170066-15170085 MS.gene52738:intron 15.0%
!!! TAATTGATTGTTTAATTTTC+AGG - chr7.2:15169625-15169644 MS.gene52738:intron 15.0%
!!! TTATATATTTTATTTGCTGT+TGG - chr7.2:15172073-15172092 MS.gene52738:intron 15.0%
!!! TTTTATTAAAAAGGACAATA+AGG - chr7.2:15172862-15172881 MS.gene52738:intron 15.0%
!!! TTTTGATGTTAAAATATGAT+TGG - chr7.2:15169848-15169867 MS.gene52738:intron 15.0%
!! AAACCTTACTTTAACATAAT+CGG + chr7.2:15169711-15169730 None:intergenic 20.0%
!! AATTCTCAATATTGTCAATT+TGG - chr7.2:15170523-15170542 MS.gene52738:CDS 20.0%
!! ATTCTCAATATTGTCAATTT+GGG - chr7.2:15170524-15170543 MS.gene52738:CDS 20.0%
!! ATTGCAACATATGAAAAAAT+GGG + chr7.2:15172918-15172937 None:intergenic 20.0%
!! GGATTATTTATAATTAAAGG+TGG - chr7.2:15169983-15170002 MS.gene52738:CDS 20.0%
!! TATATATATACCGAACATTA+TGG - chr7.2:15170421-15170440 MS.gene52738:CDS 20.0%
!! TTAGCATCAAAACAATAAAT+CGG + chr7.2:15169212-15169231 None:intergenic 20.0%
!! TTATTTATAATTAAAGGTGG+TGG - chr7.2:15169986-15170005 MS.gene52738:CDS 20.0%
!! TTCAAAATTTAACAATTACG+AGG + chr7.2:15171293-15171312 None:intergenic 20.0%
!! TTGCCATAAAAAAACAAATA+AGG + chr7.2:15169599-15169618 None:intergenic 20.0%
!!! AAAGGCCATTTTAAAATTAA+TGG - chr7.2:15171440-15171459 MS.gene52738:intron 20.0%
!!! AACAATAAATGCAAACTTTT+AGG - chr7.2:15171035-15171054 MS.gene52738:intron 20.0%
!!! ACTTGTTGTTTTATTTTACA+GGG - chr7.2:15172999-15173018 MS.gene52738:CDS 20.0%
!!! AGTTTTTAAGATTTATGAAG+CGG - chr7.2:15169942-15169961 MS.gene52738:intron 20.0%
!!! ATAACCATTTTAACATTTTC+TGG + chr7.2:15172742-15172761 None:intergenic 20.0%
!!! ATTGATTGATTTGATTTTGT+AGG - chr7.2:15169293-15169312 MS.gene52738:CDS 20.0%
!!! ATTTTTGTTAATCATCTATC+TGG - chr7.2:15171317-15171336 MS.gene52738:intron 20.0%
!!! CATCCTTATTTGTTTTTTTA+TGG - chr7.2:15169593-15169612 MS.gene52738:intron 20.0%
!!! TGCATTTTCAATTTTAATAG+AGG + chr7.2:15170567-15170586 None:intergenic 20.0%
!!! TTTTCAATTTTAATAGAGGA+TGG + chr7.2:15170563-15170582 None:intergenic 20.0%
! AATAAATTCAACCTATGATG+AGG + chr7.2:15172946-15172965 None:intergenic 25.0%
! AATTGAGAATACATCTTCAA+TGG + chr7.2:15171526-15171545 None:intergenic 25.0%
! ATTGAGAATACATCTTCAAT+GGG + chr7.2:15171525-15171544 None:intergenic 25.0%
! CATTGCAACATATGAAAAAA+TGG + chr7.2:15172919-15172938 None:intergenic 25.0%
! CTGTAAAATAAAACAACAAG+TGG + chr7.2:15173000-15173019 None:intergenic 25.0%
! GTTAAAGTAAGGTTTACATT+TGG - chr7.2:15169716-15169735 MS.gene52738:intron 25.0%
! TCGTATTTAATTCAATGAGT+TGG + chr7.2:15171601-15171620 None:intergenic 25.0%
! TTAATCAAATCTCTATGACA+TGG + chr7.2:15170057-15170076 None:intergenic 25.0%
!! AACAAAAAGTTTTACACTGT+CGG - chr7.2:15169568-15169587 MS.gene52738:CDS 25.0%
!! TATGGATTTTCACATTTTGT+AGG - chr7.2:15172331-15172350 MS.gene52738:intron 25.0%
!! TTTTTGCAGAATATGATTAC+TGG - chr7.2:15170894-15170913 MS.gene52738:intron 25.0%
!!! ATTATTTTTTTTAAGGGACG+AGG - chr7.2:15171882-15171901 MS.gene52738:intron 25.0%
!!! CACTTGTTGTTTTATTTTAC+AGG - chr7.2:15172998-15173017 MS.gene52738:CDS 25.0%
!!! GGCATCCATTAATTTTAAAA+TGG + chr7.2:15171448-15171467 None:intergenic 25.0%
!!! TTAACTGTTTTTTGACCTAT+TGG - chr7.2:15169803-15169822 MS.gene52738:intron 25.0%
!!! TTAAGTTTTATTTTGGTCGT+CGG - chr7.2:15170073-15170092 MS.gene52738:intron 25.0%
!!! TTGAAATTTTAAGTGAAGTG+AGG - chr7.2:15169232-15169251 MS.gene52738:CDS 25.0%
!!! TTTTATTCTTGTTTGGACAT+TGG - chr7.2:15172108-15172127 MS.gene52738:intron 25.0%
!!! TTTTTTGACCTATTGGAAAT+AGG - chr7.2:15169810-15169829 MS.gene52738:intron 25.0%
AAGTAGGTATTCTGTTGATA+TGG - chr7.2:15171006-15171025 MS.gene52738:CDS 30.0%
AATGTTAAAATGGTTATGCC+TGG - chr7.2:15172745-15172764 MS.gene52738:intron 30.0%
ACATTCTGGATATGAAATCA+AGG + chr7.2:15171838-15171857 None:intergenic 30.0%
AGAGATATATGTACTCACAA+AGG - chr7.2:15172627-15172646 MS.gene52738:intron 30.0%
AGCATCTATTCAATATCAGT+TGG - chr7.2:15171711-15171730 MS.gene52738:intron 30.0%
ATAAATTCCTTGCATTGCAA+TGG - chr7.2:15172156-15172175 MS.gene52738:intron 30.0%
ATATCAACAGAATACCTACT+TGG + chr7.2:15171007-15171026 None:intergenic 30.0%
ATATTGAATAGATGCTGCAT+TGG + chr7.2:15171707-15171726 None:intergenic 30.0%
ATGTTCATTGAGTCATTTAC+TGG - chr7.2:15171983-15172002 MS.gene52738:intron 30.0%
CATTAAATTATATACCGACC+TGG + chr7.2:15172820-15172839 None:intergenic 30.0%
CATTGAATTAAATACGAGCT+CGG - chr7.2:15171604-15171623 MS.gene52738:intron 30.0%
GAACAAGGAATCATCAAAAT+TGG - chr7.2:15171927-15171946 MS.gene52738:intron 30.0%
GATAACAAAAAAAGAACCCA+TGG + chr7.2:15171560-15171579 None:intergenic 30.0%
GGAATGAGCTCAAATAATTT+AGG - chr7.2:15170007-15170026 MS.gene52738:CDS 30.0%
GGTCGGTATATAATTTAATG+AGG - chr7.2:15172820-15172839 MS.gene52738:intron 30.0%
GTATTCTCAATTCAGGTAAA+AGG - chr7.2:15171534-15171553 MS.gene52738:intron 30.0%
GTTCATTCATATCATGAAGA+GGG + chr7.2:15171248-15171267 None:intergenic 30.0%
GTTGCCAGAAAATGTTAAAA+TGG - chr7.2:15172735-15172754 MS.gene52738:intron 30.0%
TATAAACGTAGCACTGTAAA+GGG - chr7.2:15169525-15169544 MS.gene52738:intron 30.0%
TATTGAATAGATGCTGCATT+GGG + chr7.2:15171706-15171725 None:intergenic 30.0%
TGAAGATGTATTCTCAATTC+AGG - chr7.2:15171527-15171546 MS.gene52738:intron 30.0%
TGAGTCATTTACTGGATTTA+TGG - chr7.2:15171991-15172010 MS.gene52738:intron 30.0%
TGGAAATAAAATGAGCATAG+CGG - chr7.2:15170159-15170178 MS.gene52738:intron 30.0%
TTATAAACGTAGCACTGTAA+AGG - chr7.2:15169524-15169543 MS.gene52738:intron 30.0%
! AAAACTAAGTTTTTCCTGGT+AGG - chr7.2:15172187-15172206 MS.gene52738:intron 30.0%
! AAACTAAGTTTTTCCTGGTA+GGG - chr7.2:15172188-15172207 MS.gene52738:intron 30.0%
! TCCTAAAACTAAGTTTTTCC+TGG - chr7.2:15172183-15172202 MS.gene52738:intron 30.0%
! TTTAAAAAGCACACAAGAGA+TGG + chr7.2:15171128-15171147 None:intergenic 30.0%
!! ACCAGGAAAAACTTAGTTTT+AGG + chr7.2:15172187-15172206 None:intergenic 30.0%
!! ATTTGGTGTTGGGTTAATTA+GGG - chr7.2:15169255-15169274 MS.gene52738:CDS 30.0%
!! TTACAGTACATGTTAGTCTT+GGG - chr7.2:15171638-15171657 MS.gene52738:intron 30.0%
!! TTTTAAGTGAAGTGAGGATT+TGG - chr7.2:15169238-15169257 MS.gene52738:CDS 30.0%
AAACACCCGATAAGACATTA+AGG + chr7.2:15170748-15170767 None:intergenic 35.0%
AAATGAGGAGATTGGAAGAA+AGG - chr7.2:15171422-15171441 MS.gene52738:intron 35.0%
AAGAAGACCAACATTATCAC+CGG + chr7.2:15172357-15172376 None:intergenic 35.0%
AAGGAGAGTAGATAAGATGA+AGG - chr7.2:15170310-15170329 MS.gene52738:intron 35.0%
AATGCTGAACCTCTAATGAT+AGG + chr7.2:15171384-15171403 None:intergenic 35.0%
AGACTTGACATGATAGGATT+AGG - chr7.2:15170212-15170231 MS.gene52738:intron 35.0%
AGAGACAACAATGTTTGTCA+AGG + chr7.2:15171745-15171764 None:intergenic 35.0%
AGCATGCCTTAATGTCTTAT+CGG - chr7.2:15170739-15170758 MS.gene52738:CDS 35.0%
AGGAGAGTAGATAAGATGAA+GGG - chr7.2:15170311-15170330 MS.gene52738:intron 35.0%
ATAAACGTAGCACTGTAAAG+GGG - chr7.2:15169526-15169545 MS.gene52738:CDS 35.0%
ATATGTACTCACAAAGGATG+AGG - chr7.2:15172633-15172652 MS.gene52738:intron 35.0%
ATGCTGAACCTCTAATGATA+GGG + chr7.2:15171383-15171402 None:intergenic 35.0%
CAATAAGTATGATGGCTACA+TGG + chr7.2:15170458-15170477 None:intergenic 35.0%
CATATCATGAAGAGGGAAAA+GGG + chr7.2:15171241-15171260 None:intergenic 35.0%
CCATCATACTTATTGTTGGT+GGG - chr7.2:15170463-15170482 MS.gene52738:CDS 35.0%
CTTTCAGTATATTAAGCACG+AGG + chr7.2:15172039-15172058 None:intergenic 35.0%
GAGAAATCAAATACTTACCC+TGG + chr7.2:15169190-15169209 None:intergenic 35.0%
GATGATATCCCTATCATTAG+AGG - chr7.2:15171372-15171391 MS.gene52738:intron 35.0%
GGCGTTTGATGAAATTGATA+AGG - chr7.2:15169347-15169366 MS.gene52738:intron 35.0%
GGTTCATTCATATCATGAAG+AGG + chr7.2:15171249-15171268 None:intergenic 35.0%
GTAGCCATCATACTTATTGT+TGG - chr7.2:15170459-15170478 MS.gene52738:CDS 35.0%
GTAGTAAGACTTGACATGAT+AGG - chr7.2:15170206-15170225 MS.gene52738:intron 35.0%
GTCAGGAATGTATTCATCAA+CGG + chr7.2:15171469-15171488 None:intergenic 35.0%
GTTGTTAGAGCTTGTAGAAA+TGG - chr7.2:15171175-15171194 MS.gene52738:intron 35.0%
TATCTACTCTCCTTACTCTA+CGG + chr7.2:15170304-15170323 None:intergenic 35.0%
TATCTCTGCTTCAAATCTCT+TGG + chr7.2:15172614-15172633 None:intergenic 35.0%
TATGTACTCACAAAGGATGA+GGG - chr7.2:15172634-15172653 MS.gene52738:intron 35.0%
TATTTGTACATGAACTGTGC+AGG - chr7.2:15171094-15171113 MS.gene52738:intron 35.0%
TCACGCAACATAGATATTTG+TGG - chr7.2:15169494-15169513 MS.gene52738:intron 35.0%
TCATATCATGAAGAGGGAAA+AGG + chr7.2:15171242-15171261 None:intergenic 35.0%
TCTCAATGCCTATTTCCAAT+AGG + chr7.2:15169821-15169840 None:intergenic 35.0%
TCTTAGATAAAAACCCACCA+CGG + chr7.2:15171205-15171224 None:intergenic 35.0%
TGAGATGTTCAAGAAGATGT+TGG - chr7.2:15172241-15172260 MS.gene52738:CDS 35.0%
TGCAACAGTAACTAACAAAG+AGG + chr7.2:15172443-15172462 None:intergenic 35.0%
TGCAATGTTATCCTCATCAT+AGG - chr7.2:15172932-15172951 MS.gene52738:CDS 35.0%
TGCTTTACAAGGTACAAATG+AGG - chr7.2:15171407-15171426 MS.gene52738:intron 35.0%
TTAGAGAGAGAATTACGTTC+TGG + chr7.2:15169029-15169048 None:intergenic 35.0%
TTCAAGAAGATGTTGGATCA+AGG - chr7.2:15172248-15172267 MS.gene52738:CDS 35.0%
TTGACCTTAGAAGCAAGTAA+CGG + chr7.2:15171065-15171084 None:intergenic 35.0%
TTGGGTTAATTAGGGTTTAG+AGG - chr7.2:15169263-15169282 MS.gene52738:CDS 35.0%
! ACGCCGATTATGTTAAAGTA+AGG - chr7.2:15169705-15169724 MS.gene52738:CDS 35.0%
! ATAGACCTCAGTTTTACTTG+AGG - chr7.2:15172686-15172705 MS.gene52738:intron 35.0%
! ATTAGCTTAATGACGCAAGA+TGG - chr7.2:15169916-15169935 MS.gene52738:intron 35.0%
! ATTGTTGGTGGGATAAGAAT+CGG - chr7.2:15170474-15170493 MS.gene52738:CDS 35.0%
! CTTACAGTACATGTTAGTCT+TGG - chr7.2:15171637-15171656 MS.gene52738:intron 35.0%
! GATTTTCACATTTTGTAGGC+CGG - chr7.2:15172335-15172354 MS.gene52738:intron 35.0%
! TCCTCATCAAATAGTGTTGA+TGG + chr7.2:15170820-15170839 None:intergenic 35.0%
!! AGAATGTGCTCTTTAGTTTG+AGG + chr7.2:15170975-15170994 None:intergenic 35.0%
!! CAAAATTGGTGATGAAGTTG+AGG - chr7.2:15171941-15171960 MS.gene52738:intron 35.0%
!! CGGTTGAATATTTTTACCCA+AGG - chr7.2:15169962-15169981 MS.gene52738:CDS 35.0%
!! GATTTGGTGTTGGGTTAATT+AGG - chr7.2:15169254-15169273 MS.gene52738:CDS 35.0%
!! GTTTAGCCTTGAAATTGACA+CGG - chr7.2:15171680-15171699 MS.gene52738:intron 35.0%
!! TACAGTACATGTTAGTCTTG+GGG - chr7.2:15171639-15171658 MS.gene52738:intron 35.0%
!!! GACGTTGTCTTGTTTTGAAA+AGG - chr7.2:15172558-15172577 MS.gene52738:CDS 35.0%
AAACGTGAAGACATTCAACG+TGG - chr7.2:15172389-15172408 MS.gene52738:intron 40.0%
AAGAGGGATTACGATTGCTA+CGG - chr7.2:15169386-15169405 MS.gene52738:intron 40.0%
AATTGAGAGGAGAAGAGGAA+AGG + chr7.2:15168902-15168921 None:intergenic 40.0%
ACAACTACAGGAAGTTACGA+AGG + chr7.2:15171270-15171289 None:intergenic 40.0%
ACAAGACAACGTCAGTAAAG+TGG + chr7.2:15172551-15172570 None:intergenic 40.0%
ACAATTACGAGGACAACTAC+AGG + chr7.2:15171282-15171301 None:intergenic 40.0%
AGAAAGCCTCATGTTAACGT+CGG - chr7.2:15169114-15169133 MS.gene52738:intron 40.0%
ATAGTTCCGACGTTAACATG+AGG + chr7.2:15169123-15169142 None:intergenic 40.0%
ATCTACTCTCCTTACTCTAC+GGG + chr7.2:15170303-15170322 None:intergenic 40.0%
ATGCACTTTATGCTAGAGTG+TGG - chr7.2:15172966-15172985 MS.gene52738:CDS 40.0%
CAAAGATTTGCCTTGAGAGA+GGG - chr7.2:15173022-15173041 MS.gene52738:CDS 40.0%
CAAGGTACAAATGAGGAGAT+TGG - chr7.2:15171414-15171433 MS.gene52738:intron 40.0%
CAATTCAGGTAAAAGGCCAT+GGG - chr7.2:15171541-15171560 MS.gene52738:intron 40.0%
CATGTTAACGTCGGAACTAT+TGG - chr7.2:15169123-15169142 MS.gene52738:CDS 40.0%
CCCACCAACAATAAGTATGA+TGG + chr7.2:15170466-15170485 None:intergenic 40.0%
CTCCTGAAGAGAAGAAAAGA+GGG - chr7.2:15169370-15169389 MS.gene52738:intron 40.0%
GAAAAGGAGAGGATTGTGTT+AGG + chr7.2:15170102-15170121 None:intergenic 40.0%
GAAAAGGTCATTGCTAAACC+CGG - chr7.2:15172574-15172593 MS.gene52738:CDS 40.0%
GAGAAAATACCCGTAGAGTA+AGG - chr7.2:15170291-15170310 MS.gene52738:intron 40.0%
GAGGAATGACGAGAATTCAA+GGG + chr7.2:15172020-15172039 None:intergenic 40.0%
GCATGCCTTAATGTCTTATC+GGG - chr7.2:15170740-15170759 MS.gene52738:CDS 40.0%
GCCATCAACACTATTTGATG+AGG - chr7.2:15170816-15170835 MS.gene52738:intron 40.0%
GCCATCATACTTATTGTTGG+TGG - chr7.2:15170462-15170481 MS.gene52738:CDS 40.0%
GGGGCGGTAAAAAACTAATA+TGG - chr7.2:15170139-15170158 MS.gene52738:intron 40.0%
GTGAGAGGTGATTGAGAAAT+CGG + chr7.2:15168947-15168966 None:intergenic 40.0%
TCAAACGACGCCATAATGTT+CGG + chr7.2:15170434-15170453 None:intergenic 40.0%
TCAATTCAGGTAAAAGGCCA+TGG - chr7.2:15171540-15171559 MS.gene52738:intron 40.0%
TCAGCATTGTCTGCTTTACA+AGG - chr7.2:15171396-15171415 MS.gene52738:intron 40.0%
TCTACCGTTACTTGCTTCTA+AGG - chr7.2:15171058-15171077 MS.gene52738:intron 40.0%
TCTTCAATGGGCATCAAGAA+AGG + chr7.2:15171513-15171532 None:intergenic 40.0%
TGACCTTCTACAAGTTTCCA+GGG - chr7.2:15171349-15171368 MS.gene52738:intron 40.0%
TTGACCTTCTACAAGTTTCC+AGG - chr7.2:15171348-15171367 MS.gene52738:intron 40.0%
TTGAGTATGAGACTGCGAAA+AGG - chr7.2:15169654-15169673 MS.gene52738:intron 40.0%
TTTGATGAGGAATGCTTCTG+CGG - chr7.2:15170829-15170848 MS.gene52738:intron 40.0%
! ATCCCTCTTTTCTTCTCTTC+AGG + chr7.2:15169375-15169394 None:intergenic 40.0%
! CCTCTGAAAACAACAGTTAC+TGG - chr7.2:15172215-15172234 MS.gene52738:intron 40.0%
! GGTGATGAAGTTGAGGTTTT+GGG - chr7.2:15171948-15171967 MS.gene52738:intron 40.0%
! TCTACAAGCTCTAACAACTC+TGG + chr7.2:15171173-15171192 None:intergenic 40.0%
! TTTGCTGTGTCTCAGATAAC+AGG - chr7.2:15170690-15170709 MS.gene52738:intron 40.0%
!! TCAAGAAAGGCTTTTCAAGC+TGG + chr7.2:15171500-15171519 None:intergenic 40.0%
!! TGAAGTGAGGATTTGGTGTT+GGG - chr7.2:15169245-15169264 MS.gene52738:CDS 40.0%
!! TGCTCTTTAGTTTGAGGCAT+TGG + chr7.2:15170969-15170988 None:intergenic 40.0%
!! TGGTGATGAAGTTGAGGTTT+TGG - chr7.2:15171947-15171966 MS.gene52738:intron 40.0%
!! TTCTGGCAACTCTACTTTTC+CGG + chr7.2:15172725-15172744 None:intergenic 40.0%
!!! ATTAGTTTTTTACCGCCCCA+AGG + chr7.2:15170138-15170157 None:intergenic 40.0%
!!! CCAGTAACTGTTGTTTTCAG+AGG + chr7.2:15172218-15172237 None:intergenic 40.0%
AAACTCAGCTTAGGAGGTCT+GGG - chr7.2:15170262-15170281 MS.gene52738:intron 45.0%
AAGCAGCAGACATGACATTC+TGG + chr7.2:15171852-15171871 None:intergenic 45.0%
AAGGATACCACCGTCCATTT+GGG + chr7.2:15170925-15170944 None:intergenic 45.0%
ACAGCAGTAACATTGTCTCC+AGG + chr7.2:15172766-15172785 None:intergenic 45.0%
ACCTATCGTAGAAAAGCTGG+TGG - chr7.2:15170239-15170258 MS.gene52738:intron 45.0%
ACTAACTGCTGCAATCACCA+GGG - chr7.2:15169170-15169189 MS.gene52738:CDS 45.0%
ACTATTGGACACGTGGATCA+CGG - chr7.2:15169138-15169157 MS.gene52738:CDS 45.0%
ATATACCGACCTGGTTCAAG+TGG + chr7.2:15172811-15172830 None:intergenic 45.0%
ATCATGAAGAGGGAAAAGGG+TGG + chr7.2:15171238-15171257 None:intergenic 45.0%
ATCCCCTGGAAACTTGTAGA+AGG + chr7.2:15171355-15171374 None:intergenic 45.0%
ATGATAGGGATATCATCCCC+TGG + chr7.2:15171369-15171388 None:intergenic 45.0%
ATTCTTCCTCCTCCATTCCT+TGG - chr7.2:15168981-15169000 MS.gene52738:intron 45.0%
ATTGGGCCGTGTCAATTTCA+AGG + chr7.2:15171689-15171708 None:intergenic 45.0%
CATCAGGTGCAGATACAACA+AGG + chr7.2:15170944-15170963 None:intergenic 45.0%
CGAGGAATGACGAGAATTCA+AGG + chr7.2:15172021-15172040 None:intergenic 45.0%
GAAGATGTTGGATCAAGGAC+AGG - chr7.2:15172253-15172272 MS.gene52738:CDS 45.0%
GACCTTCTACAAGTTTCCAG+GGG - chr7.2:15171350-15171369 MS.gene52738:intron 45.0%
GCAAAGATTTGCCTTGAGAG+AGG - chr7.2:15173021-15173040 MS.gene52738:CDS 45.0%
GCACTGTAAAGGGGTTTGAT+TGG - chr7.2:15169535-15169554 MS.gene52738:CDS 45.0%
GCAGTCCTCAAGTAAAACTG+AGG + chr7.2:15172694-15172713 None:intergenic 45.0%
GCTCCTGAAGAGAAGAAAAG+AGG - chr7.2:15169369-15169388 MS.gene52738:intron 45.0%
GGAAACACCATTGCAATGCA+AGG + chr7.2:15172166-15172185 None:intergenic 45.0%
GGAAGAATGAGTAGCGTCAT+CGG + chr7.2:15168969-15168988 None:intergenic 45.0%
GGATTACGATTGCTACGGTT+CGG - chr7.2:15169391-15169410 MS.gene52738:intron 45.0%
TAACATAATCGGCGTGTCCA+GGG + chr7.2:15169700-15169719 None:intergenic 45.0%
TACTCACAAAGGATGAGGGT+GGG - chr7.2:15172638-15172657 MS.gene52738:intron 45.0%
TCATGAAGAGGGAAAAGGGT+GGG + chr7.2:15171237-15171256 None:intergenic 45.0%
TCGACCTATCGTAGAAAAGC+TGG - chr7.2:15170236-15170255 MS.gene52738:intron 45.0%
TGAAGACATTCAACGTGGTC+AGG - chr7.2:15172394-15172413 MS.gene52738:intron 45.0%
TGAAGGGAAAGCAAAAGCTG+TGG - chr7.2:15169326-15169345 MS.gene52738:CDS 45.0%
TGTACATGAACTGTGCAGGT+TGG - chr7.2:15171098-15171117 MS.gene52738:intron 45.0%
TGTCTTCACGTTTCAGACCA+CGG + chr7.2:15172382-15172401 None:intergenic 45.0%
TGTGGAATTGAGAGGAGAAG+AGG + chr7.2:15168907-15168926 None:intergenic 45.0%
TTAACATAATCGGCGTGTCC+AGG + chr7.2:15169701-15169720 None:intergenic 45.0%
! ACAATCCTCTCCTTTTCGCT+TGG - chr7.2:15170105-15170124 MS.gene52738:intron 45.0%
! CAATCCTCTCCTTTTCGCTT+GGG - chr7.2:15170106-15170125 MS.gene52738:intron 45.0%
! CTAAGTTTTTCCTGGTAGGG+TGG - chr7.2:15172191-15172210 MS.gene52738:intron 45.0%
! CTTGGATGCTTTTGTAGCAC+CGG + chr7.2:15172596-15172615 None:intergenic 45.0%
! CTTGTTGTATCTGCACCTGA+TGG - chr7.2:15170942-15170961 MS.gene52738:CDS 45.0%
! GAGAGAAGTGTGGAATTGAG+AGG + chr7.2:15168915-15168934 None:intergenic 45.0%
! TCCACCAGCTTTTCTACGAT+AGG + chr7.2:15170243-15170262 None:intergenic 45.0%
! TGTAGGTGCTTGCTGATGAA+GGG - chr7.2:15169310-15169329 MS.gene52738:CDS 45.0%
! TTGGATGCTTTTGTAGCACC+GGG + chr7.2:15172595-15172614 None:intergenic 45.0%
! TTGTAGGCCGGTGATAATGT+TGG - chr7.2:15172347-15172366 MS.gene52738:intron 45.0%
! TTGTAGGTGCTTGCTGATGA+AGG - chr7.2:15169309-15169328 MS.gene52738:CDS 45.0%
!! AATGTTGGTCTTCTTCTCCG+TGG - chr7.2:15172362-15172381 MS.gene52738:intron 45.0%
!! ATTCTTCTAGCTCGCCAAGT+AGG - chr7.2:15170990-15171009 MS.gene52738:CDS 45.0%
!! GTGAAGTGAGGATTTGGTGT+TGG - chr7.2:15169244-15169263 MS.gene52738:CDS 45.0%
!!! TGAGGTTTTGGGTATGACAC+AGG - chr7.2:15171959-15171978 MS.gene52738:intron 45.0%
!!! TTTTTTTTCTTTTATTAAAA+AGG - chr7.2:15172853-15172872 MS.gene52738:intron 5.0%
AGATTTGCCTTGAGAGAGGG+TGG - chr7.2:15173025-15173044 MS.gene52738:CDS 50.0%
AGCTGGTGGAAACTCAGCTT+AGG - chr7.2:15170253-15170272 MS.gene52738:intron 50.0%
CAAGGATACCACCGTCCATT+TGG + chr7.2:15170926-15170945 None:intergenic 50.0%
CACTAACTGCTGCAATCACC+AGG - chr7.2:15169169-15169188 MS.gene52738:CDS 50.0%
CATGGATCTCCACCAAGGAA+TGG + chr7.2:15168996-15169015 None:intergenic 50.0%
CATTCCTTGGTGGAGATCCA+TGG - chr7.2:15168994-15169013 MS.gene52738:intron 50.0%
CGTTCTGGTGAAAGTAGCCA+TGG + chr7.2:15169014-15169033 None:intergenic 50.0%
CTGTTCCACTTGAACCAGGT+CGG - chr7.2:15172803-15172822 MS.gene52738:CDS 50.0%
CTTGTAGAAATGGAGCTCCG+TGG - chr7.2:15171185-15171204 MS.gene52738:intron 50.0%
GAAACTCAGCTTAGGAGGTC+TGG - chr7.2:15170261-15170280 MS.gene52738:intron 50.0%
GATTACTGGAGCTGCCCAAA+TGG - chr7.2:15170908-15170927 MS.gene52738:intron 50.0%
GCTACTGGTCGTGTTGAACA+AGG - chr7.2:15171912-15171931 MS.gene52738:intron 50.0%
GGTGATTGCAGCAGTTAGTG+TGG + chr7.2:15169169-15169188 None:intergenic 50.0%
GTACTCACAAAGGATGAGGG+TGG - chr7.2:15172637-15172656 MS.gene52738:intron 50.0%
GTGAACGAGTGAGAGAAGTG+TGG + chr7.2:15168925-15168944 None:intergenic 50.0%
TAGAAATGGAGCTCCGTGGT+GGG - chr7.2:15171189-15171208 MS.gene52738:intron 50.0%
TGGTGGAAACTCAGCTTAGG+AGG - chr7.2:15170256-15170275 MS.gene52738:intron 50.0%
TTGAGGACTGCTGATGTCAC+CGG - chr7.2:15172703-15172722 MS.gene52738:intron 50.0%
! TATGCTCATGTTGACTGCCC+TGG - chr7.2:15169680-15169699 MS.gene52738:CDS 50.0%
!! GCTTTTCAAGCTGGCGAACA+GGG + chr7.2:15171491-15171510 None:intergenic 50.0%
!! GTTTGAGGCATTGGTCCATC+AGG + chr7.2:15170960-15170979 None:intergenic 50.0%
ACTGGAGCTGCCCAAATGGA+CGG - chr7.2:15170912-15170931 MS.gene52738:intron 55.0%
AGAGAGGGTGGCAGAACAGT+TGG - chr7.2:15173037-15173056 MS.gene52738:CDS 55.0%
CGACCTGGTTCAAGTGGAAC+AGG + chr7.2:15172805-15172824 None:intergenic 55.0%
CGTCGGAACTATTGGACACG+TGG - chr7.2:15169131-15169150 MS.gene52738:CDS 55.0%
CTTCCTCCTCCATTCCTTGG+TGG - chr7.2:15168984-15169003 MS.gene52738:intron 55.0%
GAAGAGGGAAAAGGGTGGGA+AGG + chr7.2:15171233-15171252 None:intergenic 55.0%
GGACGAGGAACAGTTGCTAC+TGG - chr7.2:15171897-15171916 MS.gene52738:intron 55.0%
GGATCTCCACCAAGGAATGG+AGG + chr7.2:15168993-15169012 None:intergenic 55.0%
GTAGAAATGGAGCTCCGTGG+TGG - chr7.2:15171188-15171207 MS.gene52738:intron 55.0%
GTAGCCATGGATCTCCACCA+AGG + chr7.2:15169001-15169020 None:intergenic 55.0%
GTGCCTGTTCCACTTGAACC+AGG - chr7.2:15172799-15172818 MS.gene52738:CDS 55.0%
TCTCCACCAAGGAATGGAGG+AGG + chr7.2:15168990-15169009 None:intergenic 55.0%
TGAGTAGCGTCATCGGTGAG+AGG + chr7.2:15168962-15168981 None:intergenic 55.0%
TGTTCTGCCACCCTCTCTCA+AGG + chr7.2:15173035-15173054 None:intergenic 55.0%
TTTCAGAGGACCACCCTACC+AGG + chr7.2:15172204-15172223 None:intergenic 55.0%
! CAGAACAGTTGGTGCAGGTG+TGG - chr7.2:15173048-15173067 MS.gene52738:CDS 55.0%
! CCTCTCCTTTTCGCTTGGGA+CGG - chr7.2:15170110-15170129 MS.gene52738:intron 55.0%
!! GGCTTTTCAAGCTGGCGAAC+AGG + chr7.2:15171492-15171511 None:intergenic 55.0%
AGGCTCCGTCCCAAGCGAAA+AGG + chr7.2:15170118-15170137 None:intergenic 60.0%
CCGTCCCAAGCGAAAAGGAG+AGG + chr7.2:15170113-15170132 None:intergenic 60.0%
GCTTAGGAGGTCTGGGCTTG+TGG - chr7.2:15170269-15170288 MS.gene52738:intron 60.0%
TCAAGCTGGCGAACAGGGTC+AGG + chr7.2:15171486-15171505 None:intergenic 60.0%
TTCGCTTGGGACGGAGCCTT+GGG - chr7.2:15170119-15170138 MS.gene52738:intron 60.0%
TTTCGCTTGGGACGGAGCCT+TGG - chr7.2:15170118-15170137 MS.gene52738:intron 60.0%
! GGTGGCAGAACAGTTGGTGC+AGG - chr7.2:15173043-15173062 MS.gene52738:CDS 60.0%
GGAGCTGCCCAAATGGACGG+TGG - chr7.2:15170915-15170934 MS.gene52738:intron 65.0%
TCGCTTGGGACGGAGCCTTG+GGG - chr7.2:15170120-15170139 MS.gene52738:intron 65.0%
CTTGGGACGGAGCCTTGGGG+CGG - chr7.2:15170123-15170142 MS.gene52738:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 15168851 15173090 15168851 ID=MS.gene52738
chr7.2 mRNA 15168851 15173090 15168851 ID=MS.gene52738.t1;Parent=MS.gene52738
chr7.2 exon 15172909 15173090 15172909 ID=MS.gene52738.t1.exon1;Parent=MS.gene52738.t1
chr7.2 CDS 15172909 15173090 15172909 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15172750 15172825 15172750 ID=MS.gene52738.t1.exon2;Parent=MS.gene52738.t1
chr7.2 CDS 15172750 15172825 15172750 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15172534 15172626 15172534 ID=MS.gene52738.t1.exon3;Parent=MS.gene52738.t1
chr7.2 CDS 15172534 15172626 15172534 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15172220 15172294 15172220 ID=MS.gene52738.t1.exon4;Parent=MS.gene52738.t1
chr7.2 CDS 15172220 15172294 15172220 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15170934 15171038 15170934 ID=MS.gene52738.t1.exon5;Parent=MS.gene52738.t1
chr7.2 CDS 15170934 15171038 15170934 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15170735 15170825 15170735 ID=MS.gene52738.t1.exon6;Parent=MS.gene52738.t1
chr7.2 CDS 15170735 15170825 15170735 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15170393 15170598 15170393 ID=MS.gene52738.t1.exon7;Parent=MS.gene52738.t1
chr7.2 CDS 15170393 15170598 15170393 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15169961 15170044 15169961 ID=MS.gene52738.t1.exon8;Parent=MS.gene52738.t1
chr7.2 CDS 15169961 15170044 15169961 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15169667 15169732 15169667 ID=MS.gene52738.t1.exon9;Parent=MS.gene52738.t1
chr7.2 CDS 15169667 15169732 15169667 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15169526 15169588 15169526 ID=MS.gene52738.t1.exon10;Parent=MS.gene52738.t1
chr7.2 CDS 15169526 15169588 15169526 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15169121 15169361 15169121 ID=MS.gene52738.t1.exon11;Parent=MS.gene52738.t1
chr7.2 CDS 15169121 15169361 15169121 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
chr7.2 exon 15168851 15168921 15168851 ID=MS.gene52738.t1.exon12;Parent=MS.gene52738.t1
chr7.2 CDS 15168851 15168921 15168851 ID=cds.MS.gene52738.t1;Parent=MS.gene52738.t1
Gene Sequence

>MS.gene52738

ATGGCTACTTCACTCGCTCTCAGAAACTCTTCTTCTAAACGTCTTTCACCTTTCCTCTTCTCCTCTCAATTCCACACTTCTCTCACTCGTTCACCGATTTCTCAATCACCTCTCACCGATGACGCTACTCATTCTTCCTCCTCCATTCCTTGGTGGAGATCCATGGCTACTTTCACCAGAACGTAATTCTCTCTCTAACACTTTCTCTCTATTCAATTTTTCGAAATCTGAACTATTGAATTTGTTATTGTTTTTTTGTTTGCAGAAAGCCTCATGTTAACGTCGGAACTATTGGACACGTGGATCACGGAAAAACCACACTAACTGCTGCAATCACCAGGGTAAGTATTTGATTTCTCCGATTTATTGTTTTGATGCTAATTGAAATTTTAAGTGAAGTGAGGATTTGGTGTTGGGTTAATTAGGGTTTAGAGGTGACGAAATTGATTGATTTGATTTTGTAGGTGCTTGCTGATGAAGGGAAAGCAAAAGCTGTGGCGTTTGATGAAATTGATAAGGCTCCTGAAGAGAAGAAAAGAGGGATTACGATTGCTACGGTTCGGATTTTGTTTTTTGTTGCATTTTGTTTGTTTTGTGTTTTGCGTTTTGAGATTAATTTTATACACACATGCATCTAATCAAATCACGCAACATAGATATTTGTGGAACTCTCTTATAAACGTAGCACTGTAAAGGGGTTTGATTGGATATATGTGTAACAAAAAGTTTTACACTGTCGGTGCATCCTTATTTGTTTTTTTATGGCAATGTAACTAATTGATTGTTTAATTTTCAGGCACATGTTGAGTATGAGACTGCGAAAAGGCATTATGCTCATGTTGACTGCCCTGGACACGCCGATTATGTTAAAGTAAGGTTTACATTTGGAAAAATATCTCCAATAAATGTATTGTTTATGATTTAATTTCTATACAGTACTTTATATATATGTTTAACTGTTTTTTGACCTATTGGAAATAGGCATTGAGAAGTGATGTTTTGATGTTAAAATATGATTGGATATTGTGCTTTACACTATCTGTTTTTATATATACTTGCTAATTAATTAGCTTAATGACGCAAGATGGCTAAGTTTTTAAGATTTATGAAGCGGTTGAATATTTTTACCCAAGGATTATTTATAATTAAAGGTGGTGGAATGAGCTCAAATAATTTAGGCTTTAACACAATTATGTATTTGATCCATGTCATAGAGATTTGATTAAGTTTTATTTTGGTCGTCGGCTTCCTAACACAATCCTCTCCTTTTCGCTTGGGACGGAGCCTTGGGGCGGTAAAAAACTAATATGGAAATAAAATGAGCATAGCGGATATGAGAATGTTGCATTGAATATGTAGTAAGACTTGACATGATAGGATTAGGATCGACCTATCGTAGAAAAGCTGGTGGAAACTCAGCTTAGGAGGTCTGGGCTTGTGGAGAAAATACCCGTAGAGTAAGGAGAGTAGATAAGATGAAGGGATGTTGAAAATCTTTAAGAGAAATTATTAAGAAAGACCTAAAAATTAATGAGTTTTTAATATATATATATATATATATATATATATATATATATATACCGAACATTATGGCGTCGTTTGATCCATGTAGCCATCATACTTATTGTTGGTGGGATAAGAATCGGTTGTTCGTTGTTGTATGTTTTAACAGAATTCTCAATATTGTCAATTTGGGTGTTTGTGTAACTCCATCCTCTATTAAAATTGAAAATGCAAAGGAGAATTCAGATTAGTATGTATCTATTTCTAATTCTAATTCTAACCATAATATATAAGGTATTAAAAAAATAAAAAGGTCACTTAAAAGTTTGTCATCGTTTTGCTGTGTCTCAGATAACAGGTTTGTGTTGCGCTGCTTAAGTATTACAGCATGCCTTAATGTCTTATCGGGTGTTTCTATATTTGTCTTCTTTTATGTAAATCACAAAATGATTTTTTTTTTCAGCCATCAACACTATTTGATGAGGAATGCTTCTGCGGTTTTGCGTTTGTTCCGTTATGCATTTATTAAATAATTGTTTGTTTTTGCAGAATATGATTACTGGAGCTGCCCAAATGGACGGTGGTATCCTTGTTGTATCTGCACCTGATGGACCAATGCCTCAAACTAAAGAGCACATTCTTCTAGCTCGCCAAGTAGGTATTCTGTTGATATGGTTTGTAAACAATAAATGCAAACTTTTAGGTCTACCGTTACTTGCTTCTAAGGTCAACATTCATTTTATTTGTACATGAACTGTGCAGGTTGGTGTGCCATCTCTTGTGTGCTTTTTAAATAAAGTTGATGCTGTAGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTCCGTGGTGGGTTTTTATCTAAGATTTCACCTTCCCACCCTTTTCCCTCTTCATGATATGAATGAACCTTCGTAACTTCCTGTAGTTGTCCTCGTAATTGTTAAATTTTGAAGTTGATTTTTGTTAATCATCTATCTGGCAGAGCTTTTGACCTTCTACAAGTTTCCAGGGGATGATATCCCTATCATTAGAGGTTCAGCATTGTCTGCTTTACAAGGTACAAATGAGGAGATTGGAAGAAAGGCCATTTTAAAATTAATGGATGCCGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGAAAAGCCTTTCTTGATGCCCATTGAAGATGTATTCTCAATTCAGGTAAAAGGCCATGGGTTCTTTTTTTGTTATCTTAAATTTTTGAAGAATGCCAACTCATTGAATTAAATACGAGCTCGGTTATTGTATTCTTACAGTACATGTTAGTCTTGGGGTATTTTTAATCATTTGTTGTTTAGCCTTGAAATTGACACGGCCCAATGCAGCATCTATTCAATATCAGTTGGATGCGATACCTTGACAAACATTGTTGTCTCTTTTGTTCAATTTTTTTATAAAAAAAAAAACAGAGAGAGAGAGAGAGAGAATATCAAAGTATCACAATCTACCTTGATTTCATATCCAGAATGTCATGTCTGCTGCTTTACATTTTTAATTATTTTTTTTAAGGGACGAGGAACAGTTGCTACTGGTCGTGTTGAACAAGGAATCATCAAAATTGGTGATGAAGTTGAGGTTTTGGGTATGACACAGGTATGTTCATTGAGTCATTTACTGGATTTATGGCTGCCCTTGAATTCTCGTCATTCCTCGTGCTTAATATACTGAAAGCTGATTTATTTTAATTATATATTTTATTTGCTGTTGGTGATGATTAATGTTTTATTCTTGTTTGGACATTGGTCAGTTTTTTATTGTCAGAGTTTTGATAAATTCCTTGCATTGCAATGGTGTTTCCTAAAACTAAGTTTTTCCTGGTAGGGTGGTCCTCTGAAAACAACAGTTACTGGAGTTGAGATGTTCAAGAAGATGTTGGATCAAGGACAGGTAAGTTACTGTTATCTTCATATTGAGAGATATTTACGTAGTGTATATTAAACTAATATGGATTTTCACATTTTGTAGGCCGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTGAAACGTGAAGACATTCAACGTGGTCAGGTTAGAAGAAATGAACAAGCTTTTCCTCTTTGTTAGTTACTGTTGCAAGATTGAAGAGAACTTTATATTAATCTGTTCTTGTTTCAGTAGAAATTTGTAGAGTTCTCAAATTAAAATGCTAGAATCGATATACCACTTTACTGACGTTGTCTTGTTTTGAAAAGGTCATTGCTAAACCCGGTGCTACAAAAGCATCCAAGAGATTTGAAGCAGAGATATATGTACTCACAAAGGATGAGGGTGGGCGACACACTGCTTTCTTCTCTAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATGTCACCGGAAAAGTAGAGTTGCCAGAAAATGTTAAAATGGTTATGCCTGGAGACAATGTTACTGCTGTGTTTGAATTGATCGTGCCTGTTCCACTTGAACCAGGTCGGTATATAATTTAATGAGGATGTCATTCATTTTTTTTCTTTTATTAAAAAGGACAATAAGGATGTTGTTTTTGCATGTTACTCAATCAACTCCCATTTTTTCATATGTTGCAATGTTATCCTCATCATAGGTTGAATTTATTATGCACTTTATGCTAGAGTGTGGAAAGCTCACCACTTGTTGTTTTATTTTACAGGGCAAAGATTTGCCTTGAGAGAGGGTGGCAGAACAGTTGGTGCAGGTGTGGTGTCGAAAGTGATTAGCTGA
Protein sequence

>MS.gene52738.t1

MATSLALRNSSSKRLSPFLFSSQFHTSLTRSPISQSPLTDDATHSSSSIPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGIIKIGDEVEVLGMTQGGPLKTTVTGVEMFKKMLDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGATKASKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELIVPVPLEPGQRFALREGGRTVGAGVVSKVIS