AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018062

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018062.t1 MTR_7g094460 98.889 450 4 1 1 450 1 449 0.0 907
MS.gene018062.t1 MTR_2g021300 79.032 434 84 1 17 450 10 436 0.0 711
MS.gene018062.t1 MTR_3g076660 61.039 462 145 7 5 449 45 488 2.03e-175 500
MS.gene018062.t1 MTR_3g072130 66.094 233 56 3 219 450 101 311 8.63e-98 296
MS.gene018062.t1 MTR_3g072130 59.615 104 34 3 18 121 6 101 8.56e-21 93.2
MS.gene018062.t1 MTR_1g095703 30.137 438 246 14 60 448 3 429 5.04e-46 166
MS.gene018062.t1 MTR_1g495705 30.137 438 246 14 60 448 3 429 5.88e-46 165
MS.gene018062.t1 MTR_1g095650 30.137 438 246 14 60 448 3 429 5.88e-46 165
MS.gene018062.t1 MTR_6g021800 30.137 438 246 14 60 448 3 429 7.08e-46 165
MS.gene018062.t1 MTR_6g021805 30.137 438 246 14 60 448 3 429 7.08e-46 165
MS.gene018062.t1 MTR_4g014810 29.909 438 247 14 60 448 3 429 1.92e-45 164
MS.gene018062.t1 MTR_1g085410 30.345 435 243 14 60 445 3 426 2.78e-42 155
MS.gene018062.t1 MTR_1g013680 29.864 442 245 16 60 448 3 432 7.46e-41 152
MS.gene018062.t1 MTR_1g024175 28.899 436 256 14 59 448 2 429 9.13e-38 143
MS.gene018062.t1 MTR_1g101870 29.748 437 248 16 58 448 1 424 9.60e-38 146
MS.gene018062.t1 MTR_1g101870 29.977 437 247 17 58 448 1 424 1.32e-37 146
MS.gene018062.t1 MTR_8g087950 29.545 440 248 16 61 449 272 700 1.59e-37 145
MS.gene018062.t1 MTR_8g087950 29.545 440 248 16 61 449 345 773 2.81e-37 145
MS.gene018062.t1 MTR_2g082730 30.162 431 234 18 61 445 4 413 2.83e-34 134
MS.gene018062.t1 MTR_8g014590 27.945 433 254 12 65 448 8 431 3.41e-33 130
MS.gene018062.t1 MTR_8g008740 31.056 322 183 9 58 348 1 314 6.88e-32 127
MS.gene018062.t1 MTR_8g106700 27.232 448 240 17 62 446 50 474 3.64e-27 114
MS.gene018062.t1 MTR_8g106700 27.232 448 240 17 62 446 44 468 3.65e-27 113
MS.gene018062.t1 MTR_5g037350 27.177 379 229 15 102 445 107 473 4.64e-27 114
MS.gene018062.t1 MTR_1g095650 28.909 339 196 13 144 448 1 328 7.70e-27 110
MS.gene018062.t1 MTR_8g106700 27.232 448 240 17 62 446 71 495 8.58e-27 112
MS.gene018062.t1 MTR_6g080420 27.211 441 249 16 62 446 89 513 1.33e-26 112
MS.gene018062.t1 MTR_1g089520 28.074 431 244 17 62 448 6 414 1.65e-26 112
MS.gene018062.t1 MTR_2g082665 28.438 429 218 18 61 445 4 387 2.95e-25 108
MS.gene018062.t1 MTR_2g080210 32.828 198 106 6 62 235 7 201 1.47e-23 102
MS.gene018062.t1 MTR_2g037420 25.346 434 237 16 58 448 1 390 6.62e-23 101
MS.gene018062.t1 MTR_4g079360 29.766 299 188 9 17 300 4 295 1.35e-20 95.1
MS.gene018062.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 5.10e-18 86.7
MS.gene018062.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 1.01e-17 86.3
MS.gene018062.t1 MTR_1g101880 32.667 150 73 3 65 189 8 154 2.02e-17 82.4
MS.gene018062.t1 MTR_8g013910 25.982 331 188 10 60 352 3 314 2.18e-17 84.3
MS.gene018062.t1 MTR_2g069440 24.219 512 273 19 20 443 142 626 1.06e-15 80.1
MS.gene018062.t1 MTR_2g075870 27.083 288 125 11 65 299 33 288 2.13e-15 78.6
MS.gene018062.t1 MTR_2g069440 26.207 290 125 11 65 299 33 288 3.68e-15 77.8
MS.gene018062.t1 MTR_1g024165 31.159 138 73 3 65 180 12 149 9.57e-14 68.9
MS.gene018062.t1 MTR_3g097250 28.571 245 142 8 66 301 85 305 1.11e-12 70.5
MS.gene018062.t1 MTR_2g064840 29.386 228 138 6 70 297 502 706 1.42e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018062.t1 AT4G02930 85.463 454 57 5 4 450 3 454 0.0 747
MS.gene018062.t1 AT4G20360 61.605 461 152 7 4 449 25 475 7.33e-180 511
MS.gene018062.t1 AT4G20360 61.605 461 152 7 4 449 25 475 7.33e-180 511
MS.gene018062.t1 AT5G60390 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT5G60390 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT5G60390 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07920 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07940 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07940 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07940 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07940 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT1G07930 30.046 436 249 13 60 448 3 429 2.81e-45 164
MS.gene018062.t1 AT5G10630 27.851 456 253 16 52 449 227 664 7.13e-34 135
MS.gene018062.t1 AT5G10630 27.851 456 253 16 52 449 228 665 7.16e-34 135
MS.gene018062.t1 AT5G10630 27.851 456 253 16 52 449 228 665 7.16e-34 135
MS.gene018062.t1 AT5G10630 27.851 456 253 16 52 449 303 740 1.01e-33 134
MS.gene018062.t1 AT5G10630 27.851 456 253 16 52 449 298 735 1.02e-33 134
MS.gene018062.t1 AT1G07930 33.721 258 135 7 60 286 3 255 5.67e-33 128
MS.gene018062.t1 AT1G18070 26.932 453 243 18 62 450 99 527 1.05e-28 119
MS.gene018062.t1 AT1G18070 26.932 453 243 18 62 450 99 527 1.05e-28 119
MS.gene018062.t1 AT1G18070 26.293 464 243 19 62 450 99 538 7.80e-26 110
MS.gene018062.t1 AT2G31060 31.359 287 168 9 66 333 61 337 8.49e-21 95.9
MS.gene018062.t1 AT2G31060 31.271 291 167 10 66 333 61 341 2.55e-20 94.4
MS.gene018062.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.44e-19 91.3
MS.gene018062.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.44e-19 91.3
MS.gene018062.t1 AT4G18330 26.844 339 181 13 65 353 40 361 1.25e-18 88.6
MS.gene018062.t1 AT4G18330 28.862 246 128 10 65 280 40 268 4.84e-16 78.6
MS.gene018062.t1 AT1G04170 26.740 273 145 9 65 299 34 289 2.93e-15 78.2
MS.gene018062.t1 AT1G04170 26.740 273 145 9 65 299 34 289 2.93e-15 78.2
MS.gene018062.t1 AT2G18720 26.923 260 155 9 116 353 21 267 9.99e-15 75.9
MS.gene018062.t1 AT5G13650 26.048 334 220 11 29 350 48 366 1.01e-14 77.0
MS.gene018062.t1 AT5G13650 26.936 297 191 10 66 350 85 367 3.39e-14 75.5
MS.gene018062.t1 AT5G08650 30.126 239 138 9 66 297 88 304 6.16e-13 71.2
MS.gene018062.t1 AT5G08650 30.126 239 138 9 66 297 88 304 7.89e-13 71.2

Find 101 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCCAGAAAATGTTAAAA+TGG 0.264941 7.1:-13442782 MS.gene018062:CDS
GAACAAGGAATCATCAAAAT+TGG 0.282024 7.1:-13443590 MS.gene018062:CDS
TGAAGATGTATTCTCAATTC+AGG 0.301803 7.1:-13443991 MS.gene018062:intron
GTTGTTAGAGCTTGTAGAAA+TGG 0.312590 7.1:-13444343 MS.gene018062:CDS
AAACCTTACTTTAACATAAT+CGG 0.325466 7.1:+13445797 None:intergenic
CATGTTAACGTCGGAACTAT+TGG 0.338907 7.1:-13446382 MS.gene018062:CDS
CAAGGATACCACCGTCCATT+TGG 0.339574 7.1:+13444566 None:intergenic
TTGACCTTCTACAAGTTTCC+AGG 0.348867 7.1:-13444170 MS.gene018062:CDS
CCTCTGAAAACAACAGTTAC+TGG 0.352891 7.1:-13443302 MS.gene018062:CDS
TGCTCTTTAGTTTGAGGCAT+TGG 0.362727 7.1:+13444523 None:intergenic
ATTCTTCCTCCTCCATTCCT+TGG 0.362758 7.1:-13446523 MS.gene018062:CDS
AATGCTGAACCTCTAATGAT+AGG 0.371728 7.1:+13444137 None:intergenic
TGGTGATGAAGTTGAGGTTT+TGG 0.379753 7.1:-13443570 MS.gene018062:CDS
AATTGAGAATACATCTTCAA+TGG 0.404677 7.1:+13443995 None:intergenic
TCAAGCTGGCGAACAGGGTC+AGG 0.406901 7.1:+13444035 None:intergenic
GTTTGAGGCATTGGTCCATC+AGG 0.416974 7.1:+13444532 None:intergenic
AGAATGTGCTCTTTAGTTTG+AGG 0.417591 7.1:+13444517 None:intergenic
CAAGGTACAAATGAGGAGAT+TGG 0.421220 7.1:-13444104 MS.gene018062:CDS
GTGAGAGGTGATTGAGAAAT+CGG 0.424813 7.1:+13446560 None:intergenic
TATCTCTGCTTCAAATCTCT+TGG 0.432334 7.1:+13442906 None:intergenic
CTTCCTCCTCCATTCCTTGG+TGG 0.434975 7.1:-13446520 MS.gene018062:CDS
TTAACATAATCGGCGTGTCC+AGG 0.444989 7.1:+13445807 None:intergenic
CGACCTGGTTCAAGTGGAAC+AGG 0.446547 7.1:+13442715 None:intergenic
AAGGATACCACCGTCCATTT+GGG 0.446849 7.1:+13444567 None:intergenic
GATGATATCCCTATCATTAG+AGG 0.453307 7.1:-13444146 MS.gene018062:CDS
CAAAATTGGTGATGAAGTTG+AGG 0.481713 7.1:-13443576 MS.gene018062:CDS
TGAAGACATTCAACGTGGTC+AGG 0.482701 7.1:-13443123 MS.gene018062:intron
GATTACTGGAGCTGCCCAAA+TGG 0.484093 7.1:-13444581 MS.gene018062:CDS
TGTGGAATTGAGAGGAGAAG+AGG 0.484183 7.1:+13446600 None:intergenic
AATGTTAAAATGGTTATGCC+TGG 0.486949 7.1:-13442772 MS.gene018062:CDS
GCAAAGATTTGCCTTGAGAG+AGG 0.493777 7.1:-13442494 MS.gene018062:CDS
TCAGCATTGTCTGCTTTACA+AGG 0.510440 7.1:-13444122 MS.gene018062:CDS
CATTCCTTGGTGGAGATCCA+TGG 0.511576 7.1:-13446510 MS.gene018062:CDS
GGCGTTTGATGAAATTGATA+AGG 0.515289 7.1:-13446158 MS.gene018062:CDS
ATGCTGAACCTCTAATGATA+GGG 0.516366 7.1:+13444138 None:intergenic
ATCCCCTGGAAACTTGTAGA+AGG 0.518821 7.1:+13444166 None:intergenic
ATTGAGAATACATCTTCAAT+GGG 0.521499 7.1:+13443996 None:intergenic
TGAGATGTTCAAGAAGATGT+TGG 0.521796 7.1:-13443276 MS.gene018062:CDS
TTGTAGGTGCTTGCTGATGA+AGG 0.522277 7.1:-13446196 MS.gene018062:intron
TCTTCAATGGGCATCAAGAA+AGG 0.524319 7.1:+13444008 None:intergenic
CTTGTTGTATCTGCACCTGA+TGG 0.528400 7.1:-13444547 MS.gene018062:CDS
ACTATTGGACACGTGGATCA+CGG 0.528486 7.1:-13446367 MS.gene018062:CDS
CTCCTGAAGAGAAGAAAAGA+GGG 0.530043 7.1:-13446135 MS.gene018062:CDS
AGAGAGGGTGGCAGAACAGT+TGG 0.536414 7.1:-13442478 MS.gene018062:CDS
TTCAAGAAGATGTTGGATCA+AGG 0.539587 7.1:-13443269 MS.gene018062:CDS
GAAGATGTTGGATCAAGGAC+AGG 0.545197 7.1:-13443264 MS.gene018062:intron
ATATGTACTCACAAAGGATG+AGG 0.545850 7.1:-13442884 MS.gene018062:CDS
TCTACAAGCTCTAACAACTC+TGG 0.547509 7.1:+13444348 None:intergenic
CAGAACAGTTGGTGCAGGTG+TGG 0.550692 7.1:-13442467 MS.gene018062:CDS
GCTCCTGAAGAGAAGAAAAG+AGG 0.558794 7.1:-13446136 MS.gene018062:CDS
TTGAGGACTGCTGATGTCAC+CGG 0.560650 7.1:-13442814 MS.gene018062:CDS
CAAAGATTTGCCTTGAGAGA+GGG 0.560920 7.1:-13442493 MS.gene018062:CDS
GGTGGCAGAACAGTTGGTGC+AGG 0.561816 7.1:-13442472 MS.gene018062:CDS
TATGCTCATGTTGACTGCCC+TGG 0.562571 7.1:-13445825 MS.gene018062:CDS
GGACGAGGAACAGTTGCTAC+TGG 0.563419 7.1:-13443620 MS.gene018062:CDS
TGTTCTGCCACCCTCTCTCA+AGG 0.564153 7.1:+13442483 None:intergenic
AAGAGGGATTACAATTGCTA+CGG 0.564494 7.1:-13446119 MS.gene018062:intron
TGACCTTCTACAAGTTTCCA+GGG 0.568787 7.1:-13444169 MS.gene018062:CDS
TAACATAATCGGCGTGTCCA+GGG 0.569650 7.1:+13445808 None:intergenic
GTGCCTGTTCCACTTGAACC+AGG 0.570193 7.1:-13442718 MS.gene018062:intron
CGTTCTGGTGAAAGTAGCCA+TGG 0.573938 7.1:+13446493 None:intergenic
GAGAGAAGTGTGGAATTGAG+AGG 0.576888 7.1:+13446592 None:intergenic
GGAAGAATGAGTAGCGTCAT+CGG 0.581580 7.1:+13446538 None:intergenic
TACTCACAAAGGATGAGGGT+GGG 0.581890 7.1:-13442879 MS.gene018062:CDS
AGAGTTTCTGAGAGCGAGTG+AGG 0.583044 7.1:+13446646 None:intergenic
TTGAGTATGAGACTGCGAAA+AGG 0.587605 7.1:-13445851 MS.gene018062:CDS
TTGTAGGCCGGTGATAATGT+TGG 0.587725 7.1:-13443170 MS.gene018062:intron
AATTGAGAGGAGAAGAGGAA+AGG 0.587918 7.1:+13446605 None:intergenic
CATGGATCTCCACCAAGGAA+TGG 0.590261 7.1:+13446511 None:intergenic
GTCAGGAATGTATTCATCAA+CGG 0.597205 7.1:+13444052 None:intergenic
GAAAAGGTCATTGCTAAACC+CGG 0.597744 7.1:-13442943 MS.gene018062:intron
ATATACCGACCTGGTTCAAG+TGG 0.599617 7.1:+13442709 None:intergenic
GCTACTGGTCGTGTTGAACA+AGG 0.600283 7.1:-13443605 MS.gene018062:CDS
TGTAGGTGCTTGCTGATGAA+GGG 0.600394 7.1:-13446195 MS.gene018062:intron
CGTCGGAACTATTGGACACG+TGG 0.600647 7.1:-13446374 MS.gene018062:CDS
TGTCTTCACGTTTCAGACCA+CGG 0.601798 7.1:+13443138 None:intergenic
AGATTTGCCTTGAGAGAGGG+TGG 0.603839 7.1:-13442490 MS.gene018062:CDS
TGCTTTACAAGGTACAAATG+AGG 0.604944 7.1:-13444111 MS.gene018062:CDS
ATGATAGGGATATCATCCCC+TGG 0.605677 7.1:+13444152 None:intergenic
GGTGATTGCAGCAGTTAGTG+TGG 0.612708 7.1:+13446339 None:intergenic
AAGAAGACCAACATTATCAC+CGG 0.614685 7.1:+13443163 None:intergenic
ACAGCAGTAACATTGTCTCC+AGG 0.616998 7.1:+13442754 None:intergenic
ACTGGAGCTGCCCAAATGGA+CGG 0.617245 7.1:-13444577 MS.gene018062:CDS
TCTCCACCAAGGAATGGAGG+AGG 0.620202 7.1:+13446517 None:intergenic
GGATCTCCACCAAGGAATGG+AGG 0.622567 7.1:+13446514 None:intergenic
CATCAGGTGCAGATACAACA+AGG 0.636841 7.1:+13444548 None:intergenic
GACCTTCTACAAGTTTCCAG+GGG 0.639890 7.1:-13444168 MS.gene018062:CDS
TATGTACTCACAAAGGATGA+GGG 0.639988 7.1:-13442883 MS.gene018062:CDS
TGAGTAGCGTCATCGGTGAG+AGG 0.643356 7.1:+13446545 None:intergenic
AATGTTGGTCTTCTTCTCCG+TGG 0.651935 7.1:-13443155 MS.gene018062:CDS
AGAGATATATGTACTCACAA+AGG 0.660869 7.1:-13442890 MS.gene018062:CDS
GTACTCACAAAGGATGAGGG+TGG 0.668081 7.1:-13442880 MS.gene018062:CDS
GTGAACGAGTGAGAGAAGTG+TGG 0.678699 7.1:+13446582 None:intergenic
ATAGTTCCGACGTTAACATG+AGG 0.685603 7.1:+13446385 None:intergenic
GCAGTCCTCAAGTAAAACTG+AGG 0.704069 7.1:+13442826 None:intergenic
CTTGTAGAAATGGAGCTCCG+TGG 0.705529 7.1:-13444333 MS.gene018062:intron
TGAAGGGAAAGCAAAAGCTG+TGG 0.710762 7.1:-13446179 MS.gene018062:CDS
AGAAAGCCTCATGTTAACGT+CGG 0.718585 7.1:-13446391 MS.gene018062:CDS
GGAGCTGCCCAAATGGACGG+TGG 0.721733 7.1:-13444574 MS.gene018062:CDS
GTAGCCATGGATCTCCACCA+AGG 0.736526 7.1:+13446506 None:intergenic
AAACGTGAAGACATTCAACG+TGG 0.815986 7.1:-13443128 MS.gene018062:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATTATTTTTTTTA+AGG - chr7.1:13445458-13445477 MS.gene018062:intron 0.0%
!!! TTTTTAATTATTTTTTTTAA+GGG - chr7.1:13445459-13445478 MS.gene018062:intron 0.0%
!! TTTAATTATAAATAATCCTT+GGG + chr7.1:13443578-13443597 None:intergenic 10.0%
!!! AAGGTATTAAAAAAATAAAA+AGG - chr7.1:13444258-13444277 MS.gene018062:intron 10.0%
!!! TTAAAAACTCATTAATTTTT+AGG + chr7.1:13443975-13443994 None:intergenic 10.0%
!! ATCATAAACAATACATTTAT+TGG + chr7.1:13443347-13443366 None:intergenic 15.0%
!! CAAGGATTATTTATAATTAA+AGG - chr7.1:13443577-13443596 MS.gene018062:CDS 15.0%
!! CTTTAATTATAAATAATCCT+TGG + chr7.1:13443579-13443598 None:intergenic 15.0%
!! TAGTGTATATTAAACTAATA+TGG - chr7.1:13445896-13445915 MS.gene018062:intron 15.0%
!! TATTAAAATTGAAAATGCAA+AGG - chr7.1:13444181-13444200 MS.gene018062:intron 15.0%
!! TTAACATCAAAACAATAAAT+CGG + chr7.1:13442807-13442826 None:intergenic 15.0%
!!! AAATGCCATTTTAAAATTAA+TGG - chr7.1:13445022-13445041 MS.gene018062:intron 15.0%
!!! ACTTGTTATTTTATTTTACA+GGG - chr7.1:13446584-13446603 MS.gene018062:CDS 15.0%
!!! ATTAATGTTTTATTCTTGTT+TGG - chr7.1:13445684-13445703 MS.gene018062:intron 15.0%
!!! ATTGATTGATTTTATTTTGT+AGG - chr7.1:13442888-13442907 MS.gene018062:CDS 15.0%
!!! GATTTGATTAAGTTTTATTT+TGG - chr7.1:13443663-13443682 MS.gene018062:intron 15.0%
!!! TTATATATTTTATTTGCTGT+TGG - chr7.1:13445656-13445675 MS.gene018062:intron 15.0%
!!! TTTTAATACCTTACATATTA+TGG + chr7.1:13444250-13444269 None:intergenic 15.0%
!!! TTTTATTAAAAAGGACAATA+AGG - chr7.1:13446447-13446466 MS.gene018062:intron 15.0%
!!! TTTTGATGTTAAAATATGAT+TGG - chr7.1:13443443-13443462 MS.gene018062:intron 15.0%
!! AAACCTTACTTTAACATAAT+CGG + chr7.1:13443306-13443325 None:intergenic 20.0%
!! AATTCTAACCATAATATGTA+AGG - chr7.1:13444239-13444258 MS.gene018062:intron 20.0%
!! AATTCTCAATATTGTCAATT+TGG - chr7.1:13444136-13444155 MS.gene018062:CDS 20.0%
!! ATTATTTGATAAATGCATAG+CGG + chr7.1:13444479-13444498 None:intergenic 20.0%
!! ATTCTCAATATTGTCAATTT+GGG - chr7.1:13444137-13444156 MS.gene018062:CDS 20.0%
!! ATTGCAACATATGAAAAAAT+GGG + chr7.1:13446503-13446522 None:intergenic 20.0%
!! CTGTAAAATAAAATAACAAG+TGG + chr7.1:13446585-13446604 None:intergenic 20.0%
!! GGATTATTTATAATTAAAGG+TGG - chr7.1:13443580-13443599 MS.gene018062:CDS 20.0%
!! TTATTTATAATTAAAGGTGG+TGG - chr7.1:13443583-13443602 MS.gene018062:CDS 20.0%
!! TTCAAAATTTAACAATTACG+AGG + chr7.1:13444875-13444894 None:intergenic 20.0%
!!! ATAACCATTTTAACATTTTC+TGG + chr7.1:13446325-13446344 None:intergenic 20.0%
!!! ATTTTTGTTAATCATCTATC+TGG - chr7.1:13444899-13444918 MS.gene018062:intron 20.0%
!!! CACTTGTTATTTTATTTTAC+AGG - chr7.1:13446583-13446602 MS.gene018062:CDS 20.0%
!!! TAATTGTTTGTTTACTTTTC+AGG - chr7.1:13443220-13443239 MS.gene018062:intron 20.0%
!!! TGCATTTTCAATTTTAATAG+AGG + chr7.1:13444180-13444199 None:intergenic 20.0%
!!! TGTTTTTAAGATTTATGAAG+CGG - chr7.1:13443537-13443556 MS.gene018062:intron 20.0%
!!! TTTTCAATTTTAATAGAGGA+TGG + chr7.1:13444176-13444195 None:intergenic 20.0%
! AATAAATTCAACCTATGATG+AGG + chr7.1:13446531-13446550 None:intergenic 25.0%
! AATTGAGAATACATCTTCAA+TGG + chr7.1:13445108-13445127 None:intergenic 25.0%
! ATTGAGAATACATCTTCAAT+GGG + chr7.1:13445107-13445126 None:intergenic 25.0%
! CATTGCAACATATGAAAAAA+TGG + chr7.1:13446504-13446523 None:intergenic 25.0%
! GTTAAAGTAAGGTTTACATT+TGG - chr7.1:13443311-13443330 MS.gene018062:CDS 25.0%
! TTAATCAAATCTCTATGACA+TGG + chr7.1:13443654-13443673 None:intergenic 25.0%
! TTGCCATAAAAAAACAAACA+AGG + chr7.1:13443194-13443213 None:intergenic 25.0%
!! AACAAAAAGTTTTACACTGT+CGG - chr7.1:13443163-13443182 MS.gene018062:CDS 25.0%
!! TATGGATTTTCACATTTTGT+AGG - chr7.1:13445914-13445933 MS.gene018062:intron 25.0%
!! TTTTTGCAGAATATGATTAC+TGG - chr7.1:13444505-13444524 MS.gene018062:CDS 25.0%
!!! ATTATTTTTTTTAAGGGACG+AGG - chr7.1:13445465-13445484 MS.gene018062:intron 25.0%
!!! ATTTGGTGTTTGGTTAATTA+GGG - chr7.1:13442850-13442869 MS.gene018062:CDS 25.0%
!!! CATCCTTGTTTGTTTTTTTA+TGG - chr7.1:13443188-13443207 MS.gene018062:intron 25.0%
!!! GGCATCCATTAATTTTAAAA+TGG + chr7.1:13445030-13445049 None:intergenic 25.0%
!!! GTTGAATATTTTTTTACCCA+AGG - chr7.1:13443559-13443578 MS.gene018062:CDS 25.0%
!!! TTAACTGTTTTTTGACCTAT+TGG - chr7.1:13443398-13443417 MS.gene018062:intron 25.0%
!!! TTAAGTTTTATTTTGGTCGT+CGG - chr7.1:13443670-13443689 MS.gene018062:intron 25.0%
!!! TTGAAATTTTAAGTGAAGTG+AGG - chr7.1:13442827-13442846 MS.gene018062:CDS 25.0%
!!! TTTTATTCTTGTTTGGACAT+TGG - chr7.1:13445691-13445710 MS.gene018062:intron 25.0%
!!! TTTTTTGACCTATTGGAAAT+AGG - chr7.1:13443405-13443424 MS.gene018062:intron 25.0%
AATGTTAAAATGGTTATGCC+TGG - chr7.1:13446328-13446347 MS.gene018062:intron 30.0%
ACATTCTGGATATGAAATCA+AGG + chr7.1:13445421-13445440 None:intergenic 30.0%
AGAGATATATGTACTCACAA+AGG - chr7.1:13446210-13446229 MS.gene018062:intron 30.0%
AGCATCTATTCAATATCAGT+TGG - chr7.1:13445292-13445311 MS.gene018062:intron 30.0%
ATAAATTCCTTGCATTGCAA+TGG - chr7.1:13445739-13445758 MS.gene018062:intron 30.0%
ATATTGAATAGATGCTGCAT+TGG + chr7.1:13445288-13445307 None:intergenic 30.0%
CATTAAATTATATACCGACC+TGG + chr7.1:13446403-13446422 None:intergenic 30.0%
CATTGAATTAAATACGAGCT+CGG - chr7.1:13445185-13445204 MS.gene018062:intron 30.0%
GAACAAGGAATCATCAAAAT+TGG - chr7.1:13445510-13445529 MS.gene018062:intron 30.0%
GAGAAATCAAATACTTACTC+TGG + chr7.1:13442785-13442804 None:intergenic 30.0%
GATAACAAAAAAAGAACCCA+TGG + chr7.1:13445142-13445161 None:intergenic 30.0%
GGAATGAGCTCAAATAATTT+AGG - chr7.1:13443604-13443623 MS.gene018062:CDS 30.0%
GGTCGGTATATAATTTAATG+AGG - chr7.1:13446403-13446422 MS.gene018062:intron 30.0%
GTATTCTCAATTCAGGTAAA+AGG - chr7.1:13445116-13445135 MS.gene018062:intron 30.0%
GTTCATTCTTATCATGAAGA+GGG + chr7.1:13444830-13444849 None:intergenic 30.0%
GTTGCCAGAAAATGTTAAAA+TGG - chr7.1:13446318-13446337 MS.gene018062:intron 30.0%
TATAAACGTAGCACTGTAAA+GGG - chr7.1:13443120-13443139 MS.gene018062:intron 30.0%
TATTGAATAGATGCTGCATT+GGG + chr7.1:13445287-13445306 None:intergenic 30.0%
TATTTGTACATGAATTGTGC+AGG - chr7.1:13444676-13444695 MS.gene018062:intron 30.0%
TCTCAATACCTATTTCCAAT+AGG + chr7.1:13443416-13443435 None:intergenic 30.0%
TGAAGATGTATTCTCAATTC+AGG - chr7.1:13445109-13445128 MS.gene018062:intron 30.0%
TGAGTCATTTACTGGATTTA+TGG - chr7.1:13445574-13445593 MS.gene018062:intron 30.0%
TGGAAATAAAATGAGCATAG+CGG - chr7.1:13443761-13443780 MS.gene018062:intron 30.0%
TTATAAACGTAGCACTGTAA+AGG - chr7.1:13443119-13443138 MS.gene018062:intron 30.0%
TTTGGTTAATTAGGGTTTAG+AGG - chr7.1:13442858-13442877 MS.gene018062:CDS 30.0%
! AAAACTAAGTTTTTCCTGGT+AGG - chr7.1:13445770-13445789 MS.gene018062:intron 30.0%
! AAACTAAGTTTTTCCTGGTA+GGG - chr7.1:13445771-13445790 MS.gene018062:intron 30.0%
! ATGTTGATTGAGTCATTTAC+TGG - chr7.1:13445566-13445585 MS.gene018062:intron 30.0%
! TCCTAAAACTAAGTTTTTCC+TGG - chr7.1:13445766-13445785 MS.gene018062:intron 30.0%
! TTTAAAAAGCACACAAGAGA+TGG + chr7.1:13444710-13444729 None:intergenic 30.0%
!! ACCAGGAAAAACTTAGTTTT+AGG + chr7.1:13445770-13445789 None:intergenic 30.0%
!! GATTTGGTGTTTGGTTAATT+AGG - chr7.1:13442849-13442868 MS.gene018062:CDS 30.0%
!! TTACAGTACATGTTAGTCTT+GGG - chr7.1:13445219-13445238 MS.gene018062:intron 30.0%
!! TTTTAAGTGAAGTGAGGATT+TGG - chr7.1:13442833-13442852 MS.gene018062:CDS 30.0%
AAACACCCGATAAGACATTA+AGG + chr7.1:13444361-13444380 None:intergenic 35.0%
AAGAAGACCAACATTATCAC+CGG + chr7.1:13445940-13445959 None:intergenic 35.0%
AAGAGGGATTACAATTGCTA+CGG - chr7.1:13442981-13443000 MS.gene018062:intron 35.0%
AAGGAGAGTAGATAAGATGA+AGG - chr7.1:13443912-13443931 MS.gene018062:intron 35.0%
AATGCTGAACCTCTAATGAT+AGG + chr7.1:13444966-13444985 None:intergenic 35.0%
AGACTTGACAAGATAGGATT+AGG - chr7.1:13443814-13443833 MS.gene018062:intron 35.0%
AGAGACAACAATGTTTGTCA+AGG + chr7.1:13445326-13445345 None:intergenic 35.0%
AGCATGCCTTAATGTCTTAT+CGG - chr7.1:13444352-13444371 MS.gene018062:CDS 35.0%
AGGAGAGTAGATAAGATGAA+GGG - chr7.1:13443913-13443932 MS.gene018062:intron 35.0%
ATAAACGTAGCACTGTAAAG+GGG - chr7.1:13443121-13443140 MS.gene018062:intron 35.0%
ATATGTACTCACAAAGGATG+AGG - chr7.1:13446216-13446235 MS.gene018062:intron 35.0%
ATGCTGAACCTCTAATGATA+GGG + chr7.1:13444965-13444984 None:intergenic 35.0%
CAATAAGTATGATGGCTACA+TGG + chr7.1:13444068-13444087 None:intergenic 35.0%
CCATCATACTTATTGTTGGT+GGG - chr7.1:13444073-13444092 MS.gene018062:CDS 35.0%
CTTATCATGAAGAGGGAAAA+GGG + chr7.1:13444823-13444842 None:intergenic 35.0%
CTTTCAGTATATTAAGCACG+AGG + chr7.1:13445622-13445641 None:intergenic 35.0%
GACCTAAAAGAATACCTACT+TGG + chr7.1:13444618-13444637 None:intergenic 35.0%
GAGTTCCACAAATATCTATG+TGG + chr7.1:13443097-13443116 None:intergenic 35.0%
GATGATATCCCTATCATTAG+AGG - chr7.1:13444954-13444973 MS.gene018062:intron 35.0%
GGCGTTTGATGAAATTGATA+AGG - chr7.1:13442942-13442961 MS.gene018062:intron 35.0%
GGTTCATTCTTATCATGAAG+AGG + chr7.1:13444831-13444850 None:intergenic 35.0%
GTAGCCATCATACTTATTGT+TGG - chr7.1:13444069-13444088 MS.gene018062:CDS 35.0%
GTAGTAAGACTTGACAAGAT+AGG - chr7.1:13443808-13443827 MS.gene018062:intron 35.0%
GTCAGGAATGTATTCATCAA+CGG + chr7.1:13445051-13445070 None:intergenic 35.0%
GTTGTTAGAGCTTGTAGAAA+TGG - chr7.1:13444757-13444776 MS.gene018062:intron 35.0%
TAAAAGGAGAGGATTGTGTT+AGG + chr7.1:13443699-13443718 None:intergenic 35.0%
TATCTACTCTCCTTACTCTA+CGG + chr7.1:13443906-13443925 None:intergenic 35.0%
TATCTCTGCTTCAAATCTCT+TGG + chr7.1:13446197-13446216 None:intergenic 35.0%
TATGTACTCACAAAGGATGA+GGG - chr7.1:13446217-13446236 MS.gene018062:intron 35.0%
TCATGCCACATAGATATTTG+TGG - chr7.1:13443089-13443108 MS.gene018062:intron 35.0%
TCTTATCATGAAGAGGGAAA+AGG + chr7.1:13444824-13444843 None:intergenic 35.0%
TGAGATGTTCAAGAAGATGT+TGG - chr7.1:13445824-13445843 MS.gene018062:CDS 35.0%
TGCAACAGTAACTAACAAAG+AGG + chr7.1:13446026-13446045 None:intergenic 35.0%
TGCAATGTTATCCTCATCAT+AGG - chr7.1:13446517-13446536 MS.gene018062:CDS 35.0%
TGCTTTACAAGGTACAAATG+AGG - chr7.1:13444989-13445008 MS.gene018062:intron 35.0%
TTAGAGAGAGAATTACGTTC+TGG + chr7.1:13442625-13442644 None:intergenic 35.0%
TTCAAGAAGATGTTGGATCA+AGG - chr7.1:13445831-13445850 MS.gene018062:CDS 35.0%
! ACGCCGATTATGTTAAAGTA+AGG - chr7.1:13443300-13443319 MS.gene018062:CDS 35.0%
! ATAGACCTCAGTTTTACTTG+AGG - chr7.1:13446269-13446288 MS.gene018062:intron 35.0%
! ATTAGCTTAATGACGCAAGA+TGG - chr7.1:13443511-13443530 MS.gene018062:intron 35.0%
! ATTGTTGGTGGGATAAGAAT+CGG - chr7.1:13444084-13444103 MS.gene018062:CDS 35.0%
! CTTACAGTACATGTTAGTCT+TGG - chr7.1:13445218-13445237 MS.gene018062:intron 35.0%
! GATTTTCACATTTTGTAGGC+CGG - chr7.1:13445918-13445937 MS.gene018062:intron 35.0%
! TCCTCATCAAATAGTGTTGA+TGG + chr7.1:13444431-13444450 None:intergenic 35.0%
!! AGAATGTGCTCTTTAGTTTG+AGG + chr7.1:13444586-13444605 None:intergenic 35.0%
!! CAAAATTGGTGATGAAGTTG+AGG - chr7.1:13445524-13445543 MS.gene018062:intron 35.0%
!! GTTTAGCCTTGAAATTGACA+CGG - chr7.1:13445261-13445280 MS.gene018062:intron 35.0%
!! TACAGTACATGTTAGTCTTG+GGG - chr7.1:13445220-13445239 MS.gene018062:intron 35.0%
!!! GACGTTGTCTTGTTTTGAAA+AGG - chr7.1:13446141-13446160 MS.gene018062:CDS 35.0%
AAACGTGAAGACATTCAACG+TGG - chr7.1:13445972-13445991 MS.gene018062:intron 40.0%
AATTGAGAGGAGAAGAGGAA+AGG + chr7.1:13442498-13442517 None:intergenic 40.0%
ACAAGACAACGTCAGTAAAG+TGG + chr7.1:13446134-13446153 None:intergenic 40.0%
ACCTATCGTAGAAAAGCTGA+TGG - chr7.1:13443841-13443860 MS.gene018062:intron 40.0%
AGAAAGCCTCATGTTAACGT+CGG - chr7.1:13442709-13442728 MS.gene018062:intron 40.0%
ATAGTTCCGACGTTAACATG+AGG + chr7.1:13442718-13442737 None:intergenic 40.0%
ATCTACTCTCCTTACTCTAC+GGG + chr7.1:13443905-13443924 None:intergenic 40.0%
ATGCACTTTATGCTAGAGTG+TGG - chr7.1:13446551-13446570 MS.gene018062:CDS 40.0%
CAAAGATTTGCCTTGAGAGA+GGG - chr7.1:13446607-13446626 MS.gene018062:CDS 40.0%
CAAGGTACAAATGAGGAGAT+TGG - chr7.1:13444996-13445015 MS.gene018062:intron 40.0%
CAATTCAGGTAAAAGGCCAT+GGG - chr7.1:13445123-13445142 MS.gene018062:intron 40.0%
CATGTTAACGTCGGAACTAT+TGG - chr7.1:13442718-13442737 MS.gene018062:intron 40.0%
CCCACCAACAATAAGTATGA+TGG + chr7.1:13444076-13444095 None:intergenic 40.0%
CCTTAGAAGCAAGGAAGTAA+CGG + chr7.1:13444643-13444662 None:intergenic 40.0%
CTCCTGAAGAGAAGAAAAGA+GGG - chr7.1:13442965-13442984 MS.gene018062:intron 40.0%
GAAAAGGTCATTGCTAAACC+CGG - chr7.1:13446157-13446176 MS.gene018062:CDS 40.0%
GAATGATGACCTTAGAAGCA+AGG + chr7.1:13444652-13444671 None:intergenic 40.0%
GAGAAAATACCCGTAGAGTA+AGG - chr7.1:13443893-13443912 MS.gene018062:intron 40.0%
GAGGAATGACGAGAATTCAA+GGG + chr7.1:13445603-13445622 None:intergenic 40.0%
GCATGCCTTAATGTCTTATC+GGG - chr7.1:13444353-13444372 MS.gene018062:CDS 40.0%
GCCATCAACACTATTTGATG+AGG - chr7.1:13444427-13444446 MS.gene018062:intron 40.0%
GCCATCATACTTATTGTTGG+TGG - chr7.1:13444072-13444091 MS.gene018062:CDS 40.0%
GGATTACAATTGCTACGGTT+CGG - chr7.1:13442986-13443005 MS.gene018062:intron 40.0%
GGGGCGGTAAAAAACTAATA+TGG - chr7.1:13443741-13443760 MS.gene018062:intron 40.0%
GTGAGAGGTGATTGAGAAAT+CGG + chr7.1:13442543-13442562 None:intergenic 40.0%
TCAAACGACGCCATAATGTT+CGG + chr7.1:13444044-13444063 None:intergenic 40.0%
TCAATTCAGGTAAAAGGCCA+TGG - chr7.1:13445122-13445141 MS.gene018062:intron 40.0%
TCAGCATTGTCTGCTTTACA+AGG - chr7.1:13444978-13444997 MS.gene018062:intron 40.0%
TCTTAGAGAAAAACCCACCA+CGG + chr7.1:13444787-13444806 None:intergenic 40.0%
TCTTCAATGGGCATCAAGAA+AGG + chr7.1:13445095-13445114 None:intergenic 40.0%
TGACCTTCTACAAGTTTCCA+GGG - chr7.1:13444931-13444950 MS.gene018062:intron 40.0%
TGTACATGAATTGTGCAGGT+TGG - chr7.1:13444680-13444699 MS.gene018062:intron 40.0%
TTGACCTTCTACAAGTTTCC+AGG - chr7.1:13444930-13444949 MS.gene018062:intron 40.0%
TTGAGTATGAGACTGCGAAA+AGG - chr7.1:13443249-13443268 MS.gene018062:intron 40.0%
TTTGATGAGGAATGCTTCTG+CGG - chr7.1:13444440-13444459 MS.gene018062:intron 40.0%
! ATCCCTCTTTTCTTCTCTTC+AGG + chr7.1:13442970-13442989 None:intergenic 40.0%
! CCTCTGAAAACAACAGTTAC+TGG - chr7.1:13445798-13445817 MS.gene018062:intron 40.0%
! CGCCAAGTAGGTATTCTTTT+AGG - chr7.1:13444613-13444632 MS.gene018062:intron 40.0%
! GGTGATGAAGTTGAGGTTTT+GGG - chr7.1:13445531-13445550 MS.gene018062:intron 40.0%
! TCCATCAGCTTTTCTACGAT+AGG + chr7.1:13443845-13443864 None:intergenic 40.0%
! TCTACAAGCTCTAACAACTC+TGG + chr7.1:13444755-13444774 None:intergenic 40.0%
!! TCAAGAAAGGCTTTTCAAGC+TGG + chr7.1:13445082-13445101 None:intergenic 40.0%
!! TGAAGTGAGGATTTGGTGTT+TGG - chr7.1:13442840-13442859 MS.gene018062:CDS 40.0%
!! TGCTCTTTAGTTTGAGGCAT+TGG + chr7.1:13444580-13444599 None:intergenic 40.0%
!! TGGTGATGAAGTTGAGGTTT+TGG - chr7.1:13445530-13445549 MS.gene018062:intron 40.0%
!! TTCTGGCAACTCTACTTTTC+CGG + chr7.1:13446308-13446327 None:intergenic 40.0%
!!! ATTAGTTTTTTACCGCCCCA+AGG + chr7.1:13443740-13443759 None:intergenic 40.0%
!!! CCAGTAACTGTTGTTTTCAG+AGG + chr7.1:13445801-13445820 None:intergenic 40.0%
AAACTCAGCTTAGGTGGTCT+GGG - chr7.1:13443864-13443883 MS.gene018062:intron 45.0%
AAGCAGCAGACATGACATTC+TGG + chr7.1:13445435-13445454 None:intergenic 45.0%
AAGGATACCACCGTCCATTT+GGG + chr7.1:13444536-13444555 None:intergenic 45.0%
ACAATTACGAGGACGACTAC+AGG + chr7.1:13444864-13444883 None:intergenic 45.0%
ACAGCAGTAACATTGTCTCC+AGG + chr7.1:13446349-13446368 None:intergenic 45.0%
ACTATTGGACACGTGGATCA+CGG - chr7.1:13442733-13442752 MS.gene018062:CDS 45.0%
AGCTGATGGAAACTCAGCTT+AGG - chr7.1:13443855-13443874 MS.gene018062:intron 45.0%
ATATACCGACCTGGTTCAAG+TGG + chr7.1:13446394-13446413 None:intergenic 45.0%
ATCATGAAGAGGGAAAAGGG+TGG + chr7.1:13444820-13444839 None:intergenic 45.0%
ATCCCCTGGAAACTTGTAGA+AGG + chr7.1:13444937-13444956 None:intergenic 45.0%
ATGATAGGGATATCATCCCC+TGG + chr7.1:13444951-13444970 None:intergenic 45.0%
ATTCTTCCTCCTCCATTCCT+TGG - chr7.1:13442577-13442596 MS.gene018062:intron 45.0%
ATTGGGCCGTGTCAATTTCA+AGG + chr7.1:13445270-13445289 None:intergenic 45.0%
CACACACACACCGAACATTA+TGG - chr7.1:13444031-13444050 MS.gene018062:CDS 45.0%
CATCAGGTGCAGATACAACA+AGG + chr7.1:13444555-13444574 None:intergenic 45.0%
CCGTTACTTCCTTGCTTCTA+AGG - chr7.1:13444640-13444659 MS.gene018062:intron 45.0%
CGAGGAATGACGAGAATTCA+AGG + chr7.1:13445604-13445623 None:intergenic 45.0%
GAAGATGTTGGATCAAGGAC+AGG - chr7.1:13445836-13445855 MS.gene018062:CDS 45.0%
GACCTTCTACAAGTTTCCAG+GGG - chr7.1:13444932-13444951 MS.gene018062:intron 45.0%
GCAAAGATTTGCCTTGAGAG+AGG - chr7.1:13446606-13446625 MS.gene018062:CDS 45.0%
GCACTGTAAAGGGGTTTGAT+TGG - chr7.1:13443130-13443149 MS.gene018062:CDS 45.0%
GCAGTCCTCAAGTAAAACTG+AGG + chr7.1:13446277-13446296 None:intergenic 45.0%
GCTCCTGAAGAGAAGAAAAG+AGG - chr7.1:13442964-13442983 MS.gene018062:intron 45.0%
GGAAACACCATTGCAATGCA+AGG + chr7.1:13445749-13445768 None:intergenic 45.0%
GGAAGAATGAGTAGCGTCAT+CGG + chr7.1:13442565-13442584 None:intergenic 45.0%
TAACATAATCGGCGTGTCCA+GGG + chr7.1:13443295-13443314 None:intergenic 45.0%
TACTCACAAAGGATGAGGGT+GGG - chr7.1:13446221-13446240 MS.gene018062:intron 45.0%
TCATGAAGAGGGAAAAGGGT+GGG + chr7.1:13444819-13444838 None:intergenic 45.0%
TGAAGACATTCAACGTGGTC+AGG - chr7.1:13445977-13445996 MS.gene018062:intron 45.0%
TGAAGGGAAAGCAAAAGCTG+TGG - chr7.1:13442921-13442940 MS.gene018062:CDS 45.0%
TGATGGAAACTCAGCTTAGG+TGG - chr7.1:13443858-13443877 MS.gene018062:intron 45.0%
TGTCTTCACGTTTCAGACCA+CGG + chr7.1:13445965-13445984 None:intergenic 45.0%
TGTGGAATTGAGAGGAGAAG+AGG + chr7.1:13442503-13442522 None:intergenic 45.0%
TTAACATAATCGGCGTGTCC+AGG + chr7.1:13443296-13443315 None:intergenic 45.0%
! CTAAGTTTTTCCTGGTAGGG+TGG - chr7.1:13445774-13445793 MS.gene018062:intron 45.0%
! CTCTCCTTTTATCCTCGCTT+GGG - chr7.1:13443708-13443727 MS.gene018062:intron 45.0%
! CTTGGATGCTTTTGTAGCAC+CGG + chr7.1:13446179-13446198 None:intergenic 45.0%
! CTTGTTGTATCTGCACCTGA+TGG - chr7.1:13444553-13444572 MS.gene018062:CDS 45.0%
! GAGAGAAGTGTGGAATTGAG+AGG + chr7.1:13442511-13442530 None:intergenic 45.0%
! TGTAGGTGCTTGCTGATGAA+GGG - chr7.1:13442905-13442924 MS.gene018062:CDS 45.0%
! TTGGATGCTTTTGTAGCACC+GGG + chr7.1:13446178-13446197 None:intergenic 45.0%
! TTGTAGGCCGGTGATAATGT+TGG - chr7.1:13445930-13445949 MS.gene018062:intron 45.0%
! TTGTAGGTGCTTGCTGATGA+AGG - chr7.1:13442904-13442923 MS.gene018062:CDS 45.0%
!! AATGTTGGTCTTCTTCTCCG+TGG - chr7.1:13445945-13445964 MS.gene018062:intron 45.0%
!! ATTCTTCTAGCTCGCCAAGT+AGG - chr7.1:13444601-13444620 MS.gene018062:intron 45.0%
!!! TGAGGTTTTGGGTATGACAC+AGG - chr7.1:13445542-13445561 MS.gene018062:intron 45.0%
ACGACTACAGGAAGCTACGA+AGG + chr7.1:13444852-13444871 None:intergenic 50.0%
AGATTTGCCTTGAGAGAGGG+TGG - chr7.1:13446610-13446629 MS.gene018062:CDS 50.0%
CAAGGATACCACCGTCCATT+TGG + chr7.1:13444537-13444556 None:intergenic 50.0%
CATGGATCTCCACCAAGGAA+TGG + chr7.1:13442592-13442611 None:intergenic 50.0%
CATTCCTTGGTGGAGATCCA+TGG - chr7.1:13442590-13442609 MS.gene018062:intron 50.0%
CCAAGCGAGGATAAAAGGAG+AGG + chr7.1:13443710-13443729 None:intergenic 50.0%
CGTTCTGGTGAAAGTAGCCA+TGG + chr7.1:13442610-13442629 None:intergenic 50.0%
CTGTTCCACTTGAACCAGGT+CGG - chr7.1:13446386-13446405 MS.gene018062:CDS 50.0%
CTTGTAGAAATGGAGCTCCG+TGG - chr7.1:13444767-13444786 MS.gene018062:intron 50.0%
GAAACTCAGCTTAGGTGGTC+TGG - chr7.1:13443863-13443882 MS.gene018062:intron 50.0%
GATTACTGGAGCTGCCCAAA+TGG - chr7.1:13444519-13444538 MS.gene018062:CDS 50.0%
GCTACTGGTCGTGTTGAACA+AGG - chr7.1:13445495-13445514 MS.gene018062:intron 50.0%
GGTGATTGCAGCAGTTAGTG+TGG + chr7.1:13442764-13442783 None:intergenic 50.0%
GTACTCACAAAGGATGAGGG+TGG - chr7.1:13446220-13446239 MS.gene018062:intron 50.0%
GTGAACGAGTGAGAGAAGTG+TGG + chr7.1:13442521-13442540 None:intergenic 50.0%
TAGAAATGGAGCTCCGTGGT+GGG - chr7.1:13444771-13444790 MS.gene018062:intron 50.0%
TTGAGGACTGCTGATGTCAC+CGG - chr7.1:13446286-13446305 MS.gene018062:intron 50.0%
! AGAGTTTCTGAGAGCGAGTG+AGG + chr7.1:13442457-13442476 None:intergenic 50.0%
! CCTCTCCTTTTATCCTCGCT+TGG - chr7.1:13443707-13443726 MS.gene018062:intron 50.0%
! CCTTTTATCCTCGCTTGGGA+CGG - chr7.1:13443712-13443731 MS.gene018062:intron 50.0%
! TATGCTCATGTTGACTGCCC+TGG - chr7.1:13443275-13443294 MS.gene018062:CDS 50.0%
!! GCTTTTCAAGCTGGCGAACA+GGG + chr7.1:13445073-13445092 None:intergenic 50.0%
!! GTTTGAGGCATTGGTCCATC+AGG + chr7.1:13444571-13444590 None:intergenic 50.0%
ACTGGAGCTGCCCAAATGGA+CGG - chr7.1:13444523-13444542 MS.gene018062:CDS 55.0%
AGAGAGGGTGGCAGAACAGT+TGG - chr7.1:13446622-13446641 MS.gene018062:CDS 55.0%
CCGTCCCAAGCGAGGATAAA+AGG + chr7.1:13443715-13443734 None:intergenic 55.0%
CGACCTGGTTCAAGTGGAAC+AGG + chr7.1:13446388-13446407 None:intergenic 55.0%
CGTCGGAACTATTGGACACG+TGG - chr7.1:13442726-13442745 MS.gene018062:CDS 55.0%
CTTCCTCCTCCATTCCTTGG+TGG - chr7.1:13442580-13442599 MS.gene018062:intron 55.0%
GAAGAGGGAAAAGGGTGGGA+AGG + chr7.1:13444815-13444834 None:intergenic 55.0%
GGACGAGGAACAGTTGCTAC+TGG - chr7.1:13445480-13445499 MS.gene018062:intron 55.0%
GGATCTCCACCAAGGAATGG+AGG + chr7.1:13442589-13442608 None:intergenic 55.0%
GTAGAAATGGAGCTCCGTGG+TGG - chr7.1:13444770-13444789 MS.gene018062:intron 55.0%
GTAGCCATGGATCTCCACCA+AGG + chr7.1:13442597-13442616 None:intergenic 55.0%
GTGCCTGTTCCACTTGAACC+AGG - chr7.1:13446382-13446401 MS.gene018062:CDS 55.0%
TCTCCACCAAGGAATGGAGG+AGG + chr7.1:13442586-13442605 None:intergenic 55.0%
TGAGTAGCGTCATCGGTGAG+AGG + chr7.1:13442558-13442577 None:intergenic 55.0%
TGTTCTGCCACCCTCTCTCA+AGG + chr7.1:13446620-13446639 None:intergenic 55.0%
TTTCAGAGGACCACCCTACC+AGG + chr7.1:13445787-13445806 None:intergenic 55.0%
! CAGAACAGTTGGTGCAGGTG+TGG - chr7.1:13446633-13446652 MS.gene018062:CDS 55.0%
!! GGCTTTTCAAGCTGGCGAAC+AGG + chr7.1:13445074-13445093 None:intergenic 55.0%
GCTTAGGTGGTCTGGGCTTG+TGG - chr7.1:13443871-13443890 MS.gene018062:intron 60.0%
TCAAGCTGGCGAACAGGGTC+AGG + chr7.1:13445068-13445087 None:intergenic 60.0%
! GGTGGCAGAACAGTTGGTGC+AGG - chr7.1:13446628-13446647 MS.gene018062:CDS 60.0%
CTCGCTTGGGACGGAGCCTT+GGG - chr7.1:13443721-13443740 MS.gene018062:intron 65.0%
GGAGCTGCCCAAATGGACGG+TGG - chr7.1:13444526-13444545 MS.gene018062:CDS 65.0%
TCGCTTGGGACGGAGCCTTG+GGG - chr7.1:13443722-13443741 MS.gene018062:intron 65.0%
CCAAGGCTCCGTCCCAAGCG+AGG + chr7.1:13443723-13443742 None:intergenic 70.0%
CCTCGCTTGGGACGGAGCCT+TGG - chr7.1:13443720-13443739 MS.gene018062:intron 70.0%
CTTGGGACGGAGCCTTGGGG+CGG - chr7.1:13443725-13443744 MS.gene018062:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 13442447 13446675 13442447 ID=MS.gene018062
chr7.1 mRNA 13442447 13446675 13442447 ID=MS.gene018062.t1;Parent=MS.gene018062
chr7.1 exon 13446494 13446675 13446494 ID=MS.gene018062.t1.exon1;Parent=MS.gene018062.t1
chr7.1 CDS 13446494 13446675 13446494 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13446336 13446411 13446336 ID=MS.gene018062.t1.exon2;Parent=MS.gene018062.t1
chr7.1 CDS 13446336 13446411 13446336 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13446120 13446212 13446120 ID=MS.gene018062.t1.exon3;Parent=MS.gene018062.t1
chr7.1 CDS 13446120 13446212 13446120 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13445806 13445880 13445806 ID=MS.gene018062.t1.exon4;Parent=MS.gene018062.t1
chr7.1 CDS 13445806 13445880 13445806 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13444504 13444608 13444504 ID=MS.gene018062.t1.exon5;Parent=MS.gene018062.t1
chr7.1 CDS 13444504 13444608 13444504 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13444334 13444424 13444334 ID=MS.gene018062.t1.exon6;Parent=MS.gene018062.t1
chr7.1 CDS 13444334 13444424 13444334 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13443992 13444197 13443992 ID=MS.gene018062.t1.exon7;Parent=MS.gene018062.t1
chr7.1 CDS 13443992 13444197 13443992 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13443559 13443642 13443559 ID=MS.gene018062.t1.exon8;Parent=MS.gene018062.t1
chr7.1 CDS 13443559 13443642 13443559 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13443265 13443330 13443265 ID=MS.gene018062.t1.exon9;Parent=MS.gene018062.t1
chr7.1 CDS 13443265 13443330 13443265 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13443124 13443186 13443124 ID=MS.gene018062.t1.exon10;Parent=MS.gene018062.t1
chr7.1 CDS 13443124 13443186 13443124 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13442719 13442959 13442719 ID=MS.gene018062.t1.exon11;Parent=MS.gene018062.t1
chr7.1 CDS 13442719 13442959 13442719 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
chr7.1 exon 13442447 13442517 13442447 ID=MS.gene018062.t1.exon12;Parent=MS.gene018062.t1
chr7.1 CDS 13442447 13442517 13442447 ID=cds.MS.gene018062.t1;Parent=MS.gene018062.t1
Gene Sequence

>MS.gene018062

ATGGCTACCTCACTCGCTCTCAGAAACTCTTCTTCTAAACGTCTTTCACCTTTCCTCTTCTCCTCTCAATTCCACACTTCTCTCACTCGTTCACCGATTTCTCAATCACCTCTCACCGATGACGCTACTCATTCTTCCTCCTCCATTCCTTGGTGGAGATCCATGGCTACTTTCACCAGAACGTAATTCTCTCTCTAACACTTTCTCTCTATTCAATTTTTCGAAATCTGAACTATTGAATTTGTTATTGTTTTTTGTTTGCAGAAAGCCTCATGTTAACGTCGGAACTATTGGACACGTGGATCACGGAAAAACCACACTAACTGCTGCAATCACCAGAGTAAGTATTTGATTTCTCCGATTTATTGTTTTGATGTTAATTGAAATTTTAAGTGAAGTGAGGATTTGGTGTTTGGTTAATTAGGGTTTAGAGGTGACGAAATTGATTGATTTTATTTTGTAGGTGCTTGCTGATGAAGGGAAAGCAAAAGCTGTGGCGTTTGATGAAATTGATAAGGCTCCTGAAGAGAAGAAAAGAGGGATTACAATTGCTACGGTTCGGATTTTGTTTTTTGTTGCATTTTGTTTGTTTTGTGTTTTGCGTTTTGAGATTAATTTTATACGCACATGCATTTAATCAAATCATGCCACATAGATATTTGTGGAACTCTCTTATAAACGTAGCACTGTAAAGGGGTTTGATTGGATATATGTGTAACAAAAAGTTTTACACTGTCGGTGCATCCTTGTTTGTTTTTTTATGGCAATGTAACTAATTGTTTGTTTACTTTTCAGGCACATGTTGAGTATGAGACTGCGAAAAGGCATTATGCTCATGTTGACTGCCCTGGACACGCCGATTATGTTAAAGTAAGGTTTACATTTGGAAAAATATCTCCAATAAATGTATTGTTTATGATTTAATTTCTATACAGTACTTTATATATATGTTTAACTGTTTTTTGACCTATTGGAAATAGGTATTGAGAAGTGATGTTTTGATGTTAAAATATGATTGGATATTGTGCTTTACACTATCTGTTTTTATATATACTTGCTAATTAATTAGCTTAATGACGCAAGATGGCTATGTTTTTAAGATTTATGAAGCGGTTGAATATTTTTTTACCCAAGGATTATTTATAATTAAAGGTGGTGGAATGAGCTCAAATAATTTAGGCTTTAACACAATTATGTATTTGATCCATGTCATAGAGATTTGATTAAGTTTTATTTTGGTCGTCGGCTTCCTAACACAATCCTCTCCTTTTATCCTCGCTTGGGACGGAGCCTTGGGGCGGTAAAAAACTAATATGGAAATAAAATGAGCATAGCGGATATGAGAATGTTGCATTGAATATGTAGTAAGACTTGACAAGATAGGATTAGGATCGACCTATCGTAGAAAAGCTGATGGAAACTCAGCTTAGGTGGTCTGGGCTTGTGGAGAAAATACCCGTAGAGTAAGGAGAGTAGATAAGATGAAGGGATGTTGAAAATCTATAAGAGAAATTATTAAGAAAGACCTAAAAATTAATGAGTTTTTAATATATATATATATATATATATATACACACACACACACACACACACACCGAACATTATGGCGTCGTTTGATCCATGTAGCCATCATACTTATTGTTGGTGGGATAAGAATCGGTTGTTCGTTGTTGTTGTATGTTTTAACAGAATTCTCAATATTGTCAATTTGGGTGTTTGTGTAACTCCATCCTCTATTAAAATTGAAAATGCAAAGGAGAATTCAAATTAGTATGTATCTATTTCTAATTCTAATTCTAACCATAATATGTAAGGTATTAAAAAAATAAAAAGGTCACTTAAAAGTTTGTCATCGTTTTGCTGTGTCTCAGATGACAGATTTGTGTTGCGCAGCTTAAGTATTACAGCATGCCTTAATGTCTTATCGGGTGTTTTTATATTTGTCTTCTTTTATGTAAATCACAAAATGATTTTTTTTCAGCCATCAACACTATTTGATGAGGAATGCTTCTGCGGTTTTGCGTTTGTTCCGCTATGCATTTATCAAATAATTGTTTGTTTTTGCAGAATATGATTACTGGAGCTGCCCAAATGGACGGTGGTATCCTTGTTGTATCTGCACCTGATGGACCAATGCCTCAAACTAAAGAGCACATTCTTCTAGCTCGCCAAGTAGGTATTCTTTTAGGTCTACCGTTACTTCCTTGCTTCTAAGGTCATCATTCATTTTATTTGTACATGAATTGTGCAGGTTGGTGTGCCATCTCTTGTGTGCTTTTTAAATAAAGTTGATGCTGTAGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTCCGTGGTGGGTTTTTCTCTAAGATTTCACCTTCCCACCCTTTTCCCTCTTCATGATAAGAATGAACCTTCGTAGCTTCCTGTAGTCGTCCTCGTAATTGTTAAATTTTGAAGTTGATTTTTGTTAATCATCTATCTGGCAGAGCTTTTGACCTTCTACAAGTTTCCAGGGGATGATATCCCTATCATTAGAGGTTCAGCATTGTCTGCTTTACAAGGTACAAATGAGGAGATTGGAAGAAATGCCATTTTAAAATTAATGGATGCCGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGAAAAGCCTTTCTTGATGCCCATTGAAGATGTATTCTCAATTCAGGTAAAAGGCCATGGGTTCTTTTTTTGTTATCTAAATTTTTGAAGAATGCAAACTCATTGAATTAAATACGAGCTCGGTTATTGTATTCTTACAGTACATGTTAGTCTTGGGGTATTTTTAATCATTTGTTGTTTAGCCTTGAAATTGACACGGCCCAATGCAGCATCTATTCAATATCAGTTGGATGCGATACCTTGACAAACATTGTTGTCTCTTTTGTTCAATTTTTTTATTTAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAATATCAAAGTATCACAATCTACCTTGATTTCATATCCAGAATGTCATGTCTGCTGCTTTACATTTTTAATTATTTTTTTTAAGGGACGAGGAACAGTTGCTACTGGTCGTGTTGAACAAGGAATCATCAAAATTGGTGATGAAGTTGAGGTTTTGGGTATGACACAGGTATGTTGATTGAGTCATTTACTGGATTTATGGCTGCCCTTGAATTCTCGTCATTCCTCGTGCTTAATATACTGAAAGCTGATTTATTTTAATTATATATTTTATTTGCTGTTGGTGATGATTAATGTTTTATTCTTGTTTGGACATTGGTCAGTTTTTTATTATCAGAGTTTTGATAAATTCCTTGCATTGCAATGGTGTTTCCTAAAACTAAGTTTTTCCTGGTAGGGTGGTCCTCTGAAAACAACAGTTACTGGAGTTGAGATGTTCAAGAAGATGTTGGATCAAGGACAGGTAAGTTACTGTTATCTTCATATTGAGAGATATTTACATAGTGTATATTAAACTAATATGGATTTTCACATTTTGTAGGCCGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTGAAACGTGAAGACATTCAACGTGGTCAGGTTAGAAGAAATGAACAAGCTTTTCCTCTTTGTTAGTTACTGTTGCAAGATTGAAGAGAACTTTATATTAATCTGTTCTTGTTTCAGTAGAAATTTGTAGAGTTCTCAAATTAAAATGCTAGAATCGATATACCACTTTACTGACGTTGTCTTGTTTTGAAAAGGTCATTGCTAAACCCGGTGCTACAAAAGCATCCAAGAGATTTGAAGCAGAGATATATGTACTCACAAAGGATGAGGGTGGGCGACACACTGCTTTCTTCTCTAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATGTCACCGGAAAAGTAGAGTTGCCAGAAAATGTTAAAATGGTTATGCCTGGAGACAATGTTACTGCTGTGTTTGAATTGATCGTGCCTGTTCCACTTGAACCAGGTCGGTATATAATTTAATGAGGATGTCATTCATTTTTTTTTTCTTTTATTAAAAAGGACAATAAGGATGTTGTTTTTGCATGTTACTCAATCAACTCCCATTTTTTCATATGTTGCAATGTTATCCTCATCATAGGTTGAATTTATTATGCACTTTATGCTAGAGTGTGGAAAGCTCACCACTTGTTATTTTATTTTACAGGGCAAAGATTTGCCTTGAGAGAGGGTGGCAGAACAGTTGGTGCAGGTGTGGTGTCGAAAGTGATTAGCTGA
Protein sequence

>MS.gene018062.t1

MATSLALRNSSSKRLSPFLFSSQFHTSLTRSPISQSPLTDDATHSSSSIPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDDIPIIRGSALSALQGTNEEIGRNAILKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGIIKIGDEVEVLGMTQGGPLKTTVTGVEMFKKMLDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGATKASKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELIVPVPLEPGQRFALREGGRTVGAGVVSKVIS