AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04696.t1 MTR_7g094460 99.111 450 3 1 1 450 1 449 0.0 909
MS.gene04696.t1 MTR_2g021300 79.263 434 83 1 17 450 10 436 0.0 712
MS.gene04696.t1 MTR_3g076660 61.039 462 145 7 5 449 45 488 2.27e-175 500
MS.gene04696.t1 MTR_3g072130 66.524 233 55 3 219 450 101 311 1.85e-98 298
MS.gene04696.t1 MTR_3g072130 59.615 104 34 3 18 121 6 101 8.24e-21 93.2
MS.gene04696.t1 MTR_1g095703 30.137 438 246 14 60 448 3 429 9.05e-46 165
MS.gene04696.t1 MTR_1g495705 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene04696.t1 MTR_1g095650 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene04696.t1 MTR_6g021800 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene04696.t1 MTR_6g021805 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene04696.t1 MTR_4g014810 29.909 438 247 14 60 448 3 429 2.69e-45 163
MS.gene04696.t1 MTR_1g085410 30.345 435 243 14 60 445 3 426 4.27e-42 155
MS.gene04696.t1 MTR_1g013680 29.864 442 245 16 60 448 3 432 9.81e-41 151
MS.gene04696.t1 MTR_1g024175 28.899 436 256 14 59 448 2 429 1.17e-37 143
MS.gene04696.t1 MTR_1g101870 29.748 437 248 16 58 448 1 424 1.28e-37 146
MS.gene04696.t1 MTR_1g101870 29.977 437 247 17 58 448 1 424 1.48e-37 146
MS.gene04696.t1 MTR_8g087950 29.545 440 248 16 61 449 272 700 3.54e-37 144
MS.gene04696.t1 MTR_8g087950 29.545 440 248 16 61 449 345 773 5.87e-37 144
MS.gene04696.t1 MTR_2g082730 30.162 431 234 18 61 445 4 413 3.72e-34 134
MS.gene04696.t1 MTR_8g014590 27.945 433 254 12 65 448 8 431 4.28e-33 130
MS.gene04696.t1 MTR_8g008740 31.056 322 183 9 58 348 1 314 7.37e-32 127
MS.gene04696.t1 MTR_5g037350 27.177 379 229 15 102 445 107 473 4.23e-27 114
MS.gene04696.t1 MTR_8g106700 27.455 448 239 18 62 446 50 474 5.49e-27 113
MS.gene04696.t1 MTR_8g106700 27.455 448 239 18 62 446 44 468 5.73e-27 113
MS.gene04696.t1 MTR_1g095650 28.909 339 196 13 144 448 1 328 1.25e-26 110
MS.gene04696.t1 MTR_8g106700 27.455 448 239 18 62 446 71 495 1.29e-26 112
MS.gene04696.t1 MTR_6g080420 27.765 443 244 18 62 446 89 513 1.31e-26 112
MS.gene04696.t1 MTR_2g082665 28.438 429 218 18 61 445 4 387 3.95e-25 108
MS.gene04696.t1 MTR_2g080210 32.828 198 106 6 62 235 7 201 1.22e-23 103
MS.gene04696.t1 MTR_2g037420 25.346 434 237 16 58 448 1 390 6.25e-23 101
MS.gene04696.t1 MTR_4g079360 30.100 299 187 9 17 300 4 295 3.02e-21 97.1
MS.gene04696.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 8.62e-18 85.9
MS.gene04696.t1 MTR_8g013910 25.982 331 188 10 60 352 3 314 1.89e-17 84.7
MS.gene04696.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 2.08e-17 85.1
MS.gene04696.t1 MTR_1g101880 32.667 150 73 3 65 189 8 154 2.14e-17 82.4
MS.gene04696.t1 MTR_2g069440 23.810 525 259 20 20 443 142 626 1.48e-15 79.3
MS.gene04696.t1 MTR_2g075870 27.083 288 125 11 65 299 33 288 2.64e-15 78.2
MS.gene04696.t1 MTR_2g069440 26.207 290 125 11 65 299 33 288 4.25e-15 77.4
MS.gene04696.t1 MTR_1g024165 31.159 138 73 3 65 180 12 149 9.67e-14 68.9
MS.gene04696.t1 MTR_3g097250 28.571 245 142 8 66 301 85 305 9.61e-13 70.9
MS.gene04696.t1 MTR_2g064840 29.386 228 138 6 70 297 502 706 1.12e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04696.t1 AT4G02930 85.463 454 57 5 4 450 3 454 0.0 748
MS.gene04696.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene04696.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene04696.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07920 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT1G07930 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene04696.t1 AT5G10630 28.035 453 256 14 52 449 227 664 1.11e-33 134
MS.gene04696.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene04696.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene04696.t1 AT5G10630 28.035 453 256 14 52 449 303 740 1.22e-33 134
MS.gene04696.t1 AT5G10630 28.035 453 256 14 52 449 298 735 1.41e-33 134
MS.gene04696.t1 AT1G07930 33.721 258 135 7 60 286 3 255 1.07e-32 127
MS.gene04696.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene04696.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene04696.t1 AT1G18070 26.293 464 243 19 62 450 99 538 6.41e-26 110
MS.gene04696.t1 AT2G31060 31.707 287 167 9 66 333 61 337 1.91e-21 97.8
MS.gene04696.t1 AT2G31060 31.615 291 166 10 66 333 61 341 6.34e-21 96.3
MS.gene04696.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene04696.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene04696.t1 AT4G18330 26.549 339 182 12 65 353 40 361 2.14e-18 87.8
MS.gene04696.t1 AT4G18330 28.455 246 129 9 65 280 40 268 8.27e-16 78.2
MS.gene04696.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene04696.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene04696.t1 AT5G13650 25.150 334 223 11 29 350 48 366 7.64e-15 77.4
MS.gene04696.t1 AT2G18720 26.923 260 155 9 116 353 21 267 1.05e-14 75.9
MS.gene04696.t1 AT5G13650 25.926 297 194 10 66 350 85 367 2.34e-14 75.9
MS.gene04696.t1 AT5G08650 30.126 239 138 9 66 297 88 304 6.05e-13 71.2
MS.gene04696.t1 AT5G08650 30.126 239 138 9 66 297 88 304 7.62e-13 71.2

Find 102 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCCAGAAAATGTTAAAA+TGG 0.264941 7.3:-16535880 MS.gene04696:CDS
GAACAAGGAATCATCAAAAT+TGG 0.282024 7.3:-16536670 MS.gene04696:CDS
TGAAGATGTATTCTCAATTC+AGG 0.301803 7.3:-16537092 MS.gene04696:intron
GTTGTTAGAGCTTGTAGAAA+TGG 0.312590 7.3:-16537444 MS.gene04696:CDS
AAACCTTACTTTAACATAAT+CGG 0.325466 7.3:+16538892 None:intergenic
CATGTTAACGTCGGAACTAT+TGG 0.338907 7.3:-16539477 MS.gene04696:CDS
CAAGGATACCACCGTCCATT+TGG 0.339574 7.3:+16537700 None:intergenic
TTGACCTTCTACAAGTTTCC+AGG 0.348867 7.3:-16537271 MS.gene04696:CDS
CCTCTGAAAACAACAGTTAC+TGG 0.352891 7.3:-16536383 MS.gene04696:CDS
TGCTCTTTAGTTTGAGGCAT+TGG 0.362727 7.3:+16537657 None:intergenic
ATTCTTCCTCCTCCATTCCT+TGG 0.362758 7.3:-16539618 MS.gene04696:CDS
AATGCTGAACCTCTAATGAT+AGG 0.371728 7.3:+16537238 None:intergenic
TGGTGATGAAGTTGAGGTTT+TGG 0.379753 7.3:-16536650 MS.gene04696:CDS
AATTGAGAATACATCTTCAA+TGG 0.404677 7.3:+16537096 None:intergenic
TCAAGCTGGCGAACAGGGTC+AGG 0.406901 7.3:+16537136 None:intergenic
GTTTGAGGCATTGGTCCATC+AGG 0.416974 7.3:+16537666 None:intergenic
AGAATGTGCTCTTTAGTTTG+AGG 0.417591 7.3:+16537651 None:intergenic
CAAGGTACAAATGAGGAGAT+TGG 0.421220 7.3:-16537205 MS.gene04696:CDS
GTGAGAGGTGATTGAGAAAT+CGG 0.424813 7.3:+16539655 None:intergenic
TATCTCTGCTTCAAATCTCT+TGG 0.432334 7.3:+16536004 None:intergenic
CTTCCTCCTCCATTCCTTGG+TGG 0.434975 7.3:-16539615 MS.gene04696:CDS
TTAACATAATCGGCGTGTCC+AGG 0.444989 7.3:+16538902 None:intergenic
CGACCTGGTTCAAGTGGAAC+AGG 0.446547 7.3:+16535813 None:intergenic
AAGGATACCACCGTCCATTT+GGG 0.446849 7.3:+16537701 None:intergenic
GATGATATCCCTATCATTAG+AGG 0.453307 7.3:-16537247 MS.gene04696:CDS
CAAAATTGGTGATGAAGTTG+AGG 0.481713 7.3:-16536656 MS.gene04696:CDS
TGAAGACATTCAACGTGGTC+AGG 0.482701 7.3:-16536204 MS.gene04696:intron
GATTACTGGAGCTGCCCAAA+TGG 0.484093 7.3:-16537715 MS.gene04696:CDS
AATGTTAAAATGGTTATGCC+TGG 0.486949 7.3:-16535870 MS.gene04696:CDS
GCAAAGATTTGCCTTGAGAG+AGG 0.493777 7.3:-16535594 MS.gene04696:CDS
AAATGAGGAGATTGGAAGAA+AGG 0.499059 7.3:-16537197 MS.gene04696:CDS
AAGGAATGGAGGAGGAAGAA+TGG 0.506045 7.3:+16539620 None:intergenic
TCAGCATTGTCTGCTTTACA+AGG 0.510440 7.3:-16537223 MS.gene04696:CDS
CATTCCTTGGTGGAGATCCA+TGG 0.511576 7.3:-16539605 MS.gene04696:CDS
GGCGTTTGATGAAATTGATA+AGG 0.515289 7.3:-16539253 MS.gene04696:CDS
ATGCTGAACCTCTAATGATA+GGG 0.516366 7.3:+16537239 None:intergenic
AGGAATGGAGGAGGAAGAAT+GGG 0.516893 7.3:+16539621 None:intergenic
ATCCCCTGGAAACTTGTAGA+AGG 0.518821 7.3:+16537267 None:intergenic
ATTGAGAATACATCTTCAAT+GGG 0.521499 7.3:+16537097 None:intergenic
TGAGATGTTCAAGAAGATGT+TGG 0.521796 7.3:-16536357 MS.gene04696:CDS
GGAAGAATGGGTAGCGTCAT+CGG 0.522126 7.3:+16539633 None:intergenic
TTGTAGGTGCTTGCTGATGA+AGG 0.522277 7.3:-16539291 MS.gene04696:intron
TCTTCAATGGGCATCAAGAA+AGG 0.524319 7.3:+16537109 None:intergenic
CTTGTTGTATCTGCACCTGA+TGG 0.528400 7.3:-16537681 MS.gene04696:CDS
ACTATTGGACACGTGGATCA+CGG 0.528486 7.3:-16539462 MS.gene04696:CDS
CTCCTGAAGAGAAGAAAAGA+GGG 0.530043 7.3:-16539230 MS.gene04696:CDS
AGAGAGGGTGGCAGAACAGT+TGG 0.536414 7.3:-16535578 MS.gene04696:CDS
TTCAAGAAGATGTTGGATCA+AGG 0.539587 7.3:-16536350 MS.gene04696:CDS
GAAGATGTTGGATCAAGGAC+AGG 0.545197 7.3:-16536345 MS.gene04696:intron
ATATGTACTCACAAAGGATG+AGG 0.545850 7.3:-16535982 MS.gene04696:CDS
TCTACAAGCTCTAACAACTC+TGG 0.547509 7.3:+16537449 None:intergenic
CAGAACAGTTGGTGCAGGTG+TGG 0.550692 7.3:-16535567 MS.gene04696:CDS
GCTCCTGAAGAGAAGAAAAG+AGG 0.558794 7.3:-16539231 MS.gene04696:CDS
TTGAGGACTGCTGATGTCAC+CGG 0.560650 7.3:-16535912 MS.gene04696:CDS
CAAAGATTTGCCTTGAGAGA+GGG 0.560920 7.3:-16535593 MS.gene04696:CDS
GGTGGCAGAACAGTTGGTGC+AGG 0.561816 7.3:-16535572 MS.gene04696:CDS
TATGCTCATGTTGACTGCCC+TGG 0.562571 7.3:-16538920 MS.gene04696:CDS
GGACGAGGAACAGTTGCTAC+TGG 0.563419 7.3:-16536700 MS.gene04696:CDS
TGTTCTGCCACCCTCTCTCA+AGG 0.564153 7.3:+16535583 None:intergenic
AAGAGGGATTACAATTGCTA+CGG 0.564494 7.3:-16539214 MS.gene04696:intron
TGACCTTCTACAAGTTTCCA+GGG 0.568787 7.3:-16537270 MS.gene04696:CDS
TAACATAATCGGCGTGTCCA+GGG 0.569650 7.3:+16538903 None:intergenic
GTGCCTGTTCCACTTGAACC+AGG 0.570193 7.3:-16535816 MS.gene04696:intron
CGTTCTGGTGAAAGTAGCCA+TGG 0.573938 7.3:+16539588 None:intergenic
TGTGGAATTGAGACGAGAAG+AGG 0.579299 7.3:+16539695 None:intergenic
TACTCACAAAGGATGAGGGT+GGG 0.581890 7.3:-16535977 MS.gene04696:CDS
AGAGTTTCTGAGAGCGAGTG+AGG 0.583044 7.3:+16539741 None:intergenic
AATTGAGACGAGAAGAGGAA+AGG 0.584467 7.3:+16539700 None:intergenic
TTGAGTATGAGACTGCGAAA+AGG 0.587605 7.3:-16538946 MS.gene04696:CDS
TTGTAGGCCGGTGATAATGT+TGG 0.587725 7.3:-16536251 MS.gene04696:intron
CATGGATCTCCACCAAGGAA+TGG 0.590261 7.3:+16539606 None:intergenic
GAAAAGGTCATTGCTAAACC+CGG 0.597744 7.3:-16536041 MS.gene04696:intron
ATATACCGACCTGGTTCAAG+TGG 0.599617 7.3:+16535807 None:intergenic
GCTACTGGTCGTGTTGAACA+AGG 0.600283 7.3:-16536685 MS.gene04696:CDS
TGTAGGTGCTTGCTGATGAA+GGG 0.600394 7.3:-16539290 MS.gene04696:intron
CGTCGGAACTATTGGACACG+TGG 0.600647 7.3:-16539469 MS.gene04696:CDS
TGTCTTCACGTTTCAGACCA+CGG 0.601798 7.3:+16536219 None:intergenic
AGATTTGCCTTGAGAGAGGG+TGG 0.603839 7.3:-16535590 MS.gene04696:CDS
TGCTTTACAAGGTACAAATG+AGG 0.604944 7.3:-16537212 MS.gene04696:CDS
ATGATAGGGATATCATCCCC+TGG 0.605677 7.3:+16537253 None:intergenic
GGTGATTGCAGCAGTTAGTG+TGG 0.612708 7.3:+16539434 None:intergenic
AAGAAGACCAACATTATCAC+CGG 0.614685 7.3:+16536244 None:intergenic
ACAGCAGTAACATTGTCTCC+AGG 0.616998 7.3:+16535852 None:intergenic
ACTGGAGCTGCCCAAATGGA+CGG 0.617245 7.3:-16537711 MS.gene04696:CDS
TCTCCACCAAGGAATGGAGG+AGG 0.620202 7.3:+16539612 None:intergenic
GGATCTCCACCAAGGAATGG+AGG 0.622567 7.3:+16539609 None:intergenic
CATCAGGTGCAGATACAACA+AGG 0.636841 7.3:+16537682 None:intergenic
GACCTTCTACAAGTTTCCAG+GGG 0.639890 7.3:-16537269 MS.gene04696:CDS
TATGTACTCACAAAGGATGA+GGG 0.639988 7.3:-16535981 MS.gene04696:CDS
TGGGTAGCGTCATCGGTGAG+AGG 0.643356 7.3:+16539640 None:intergenic
AATGTTGGTCTTCTTCTCCG+TGG 0.651935 7.3:-16536236 MS.gene04696:CDS
AGAGATATATGTACTCACAA+AGG 0.660869 7.3:-16535988 MS.gene04696:CDS
GTACTCACAAAGGATGAGGG+TGG 0.668081 7.3:-16535978 MS.gene04696:CDS
GTGAACGAGTGAGAGAAGTG+TGG 0.678699 7.3:+16539677 None:intergenic
ATAGTTCCGACGTTAACATG+AGG 0.685603 7.3:+16539480 None:intergenic
GCAGTCCTCAAGTAAAACTG+AGG 0.704069 7.3:+16535924 None:intergenic
CTTGTAGAAATGGAGCTCCG+TGG 0.705529 7.3:-16537434 MS.gene04696:intron
TGAAGGGAAAGCAAAAGCTG+TGG 0.710762 7.3:-16539274 MS.gene04696:CDS
AGAAAGCCTCATGTTAACGT+CGG 0.718585 7.3:-16539486 MS.gene04696:CDS
GGAGCTGCCCAAATGGACGG+TGG 0.721733 7.3:-16537708 MS.gene04696:CDS
GTAGCCATGGATCTCCACCA+AGG 0.736526 7.3:+16539601 None:intergenic
AAACGTGAAGACATTCAACG+TGG 0.815986 7.3:-16536209 MS.gene04696:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTTTTTTTTTTAA+GGG - chr7.3:16538574-16538593 MS.gene04696:intron 0.0%
!!! TTTTTAATTTTTTTTTTTTA+AGG - chr7.3:16538573-16538592 MS.gene04696:intron 0.0%
!! TTTAATTATAAATAATCCTT+GGG + chr7.3:16536682-16536701 None:intergenic 10.0%
!!! AAGGTATTAAAAAAATAAAA+AGG - chr7.3:16537318-16537337 MS.gene04696:intron 10.0%
!!! TTAAAAACTCATTAATTTTT+AGG + chr7.3:16537031-16537050 None:intergenic 10.0%
!! ATCATAAACAATACATTTAT+TGG + chr7.3:16536447-16536466 None:intergenic 15.0%
!! CAAGGATTATTTATAATTAA+AGG - chr7.3:16536681-16536700 MS.gene04696:CDS 15.0%
!! CTTTAATTATAAATAATCCT+TGG + chr7.3:16536683-16536702 None:intergenic 15.0%
!! TAGTGTATATTAAACTAATA+TGG - chr7.3:16539010-16539029 MS.gene04696:intron 15.0%
!! TATTAAAATTGAAAATGCAA+AGG - chr7.3:16537241-16537260 MS.gene04696:CDS 15.0%
!! TTAACATCAAAACAATAAAT+CGG + chr7.3:16535907-16535926 None:intergenic 15.0%
!!! ACTTGTTATTTTATTTTACA+GGG - chr7.3:16539679-16539698 MS.gene04696:CDS 15.0%
!!! ATTAATGTTTTATTCTTGTT+TGG - chr7.3:16538799-16538818 MS.gene04696:intron 15.0%
!!! ATTGATTGATTTTATTTTGT+AGG - chr7.3:16535988-16536007 MS.gene04696:CDS 15.0%
!!! GATTTGATTAAGTTTTATTT+TGG - chr7.3:16536767-16536786 MS.gene04696:intron 15.0%
!!! TAATTGTTTGTTTAATTTTC+AGG - chr7.3:16536320-16536339 MS.gene04696:intron 15.0%
!!! TTATATATTTTATTTGCTGT+TGG - chr7.3:16538771-16538790 MS.gene04696:intron 15.0%
!!! TTTTAATACCTTACATATTA+TGG + chr7.3:16537310-16537329 None:intergenic 15.0%
!!! TTTTGATGTTAAAATATGAT+TGG - chr7.3:16536547-16536566 MS.gene04696:intron 15.0%
!! AAACCTTACTTTAACATAAT+CGG + chr7.3:16536406-16536425 None:intergenic 20.0%
!! AATTCTAACCATAATATGTA+AGG - chr7.3:16537299-16537318 MS.gene04696:intron 20.0%
!! AATTCTCAATATTGTCAATT+TGG - chr7.3:16537196-16537215 MS.gene04696:CDS 20.0%
!! ATTCTCAATATTGTCAATTT+GGG - chr7.3:16537197-16537216 MS.gene04696:CDS 20.0%
!! ATTGCAACATATGAAAAAAT+GGG + chr7.3:16539598-16539617 None:intergenic 20.0%
!! CTGTAAAATAAAATAACAAG+TGG + chr7.3:16539680-16539699 None:intergenic 20.0%
!! GGATTATTTATAATTAAAGG+TGG - chr7.3:16536684-16536703 MS.gene04696:CDS 20.0%
!! TTATTTATAATTAAAGGTGG+TGG - chr7.3:16536687-16536706 MS.gene04696:CDS 20.0%
!! TTCAAAATTTAACAATTACG+AGG + chr7.3:16537969-16537988 None:intergenic 20.0%
!!! AAAGGCCATTTTAAAATTAA+TGG - chr7.3:16538116-16538135 MS.gene04696:intron 20.0%
!!! AACAATAAATGCAAACTTTT+AGG - chr7.3:16537707-16537726 MS.gene04696:CDS 20.0%
!!! AGCATCCATTAATTTTAAAA+TGG + chr7.3:16538124-16538143 None:intergenic 20.0%
!!! ATAACCATTTTAACATTTTC+TGG + chr7.3:16539422-16539441 None:intergenic 20.0%
!!! ATTTTTGTTAATCATCTATC+TGG - chr7.3:16537993-16538012 MS.gene04696:intron 20.0%
!!! CACTTGTTATTTTATTTTAC+AGG - chr7.3:16539678-16539697 MS.gene04696:CDS 20.0%
!!! TGCATTTTCAATTTTAATAG+AGG + chr7.3:16537240-16537259 None:intergenic 20.0%
!!! TGTTTTTAAGATTTATGAAG+CGG - chr7.3:16536641-16536660 MS.gene04696:CDS 20.0%
!!! TTTTCAATTTTAATAGAGGA+TGG + chr7.3:16537236-16537255 None:intergenic 20.0%
! AATAAATTCAACCTATGATG+AGG + chr7.3:16539626-16539645 None:intergenic 25.0%
! AATTGAGAATACATCTTCAA+TGG + chr7.3:16538202-16538221 None:intergenic 25.0%
! ATTGAGAATACATCTTCAAT+GGG + chr7.3:16538201-16538220 None:intergenic 25.0%
! CATTGCAACATATGAAAAAA+TGG + chr7.3:16539599-16539618 None:intergenic 25.0%
! GTTAAAGTAAGGTTTACATT+TGG - chr7.3:16536411-16536430 MS.gene04696:intron 25.0%
! TATATATACACCGAACATTA+TGG - chr7.3:16537091-16537110 MS.gene04696:intron 25.0%
! TCGTATTTAATTCAATGAGT+TGG + chr7.3:16538277-16538296 None:intergenic 25.0%
! TTAATCAAATCTCTATGACA+TGG + chr7.3:16536758-16536777 None:intergenic 25.0%
! TTGCCATAAAAAAACAAACA+AGG + chr7.3:16536294-16536313 None:intergenic 25.0%
!! AAAACTAAGTTTTTCCTGTA+GGG - chr7.3:16538885-16538904 MS.gene04696:intron 25.0%
!! AACAAAAAGTTTTACACTGT+CGG - chr7.3:16536263-16536282 MS.gene04696:intron 25.0%
!! TAAAACTAAGTTTTTCCTGT+AGG - chr7.3:16538884-16538903 MS.gene04696:intron 25.0%
!! TATGGATTTTCACATTTTGT+AGG - chr7.3:16539028-16539047 MS.gene04696:intron 25.0%
!! TTTTTGCAGAATATGATTAC+TGG - chr7.3:16537566-16537585 MS.gene04696:intron 25.0%
!!! ATTTGGTGTTTGGTTAATTA+GGG - chr7.3:16535950-16535969 MS.gene04696:CDS 25.0%
!!! CATCCTTGTTTGTTTTTTTA+TGG - chr7.3:16536288-16536307 MS.gene04696:intron 25.0%
!!! GTTGAATATTTTTTTACCCA+AGG - chr7.3:16536663-16536682 MS.gene04696:CDS 25.0%
!!! TACAGGAAAAACTTAGTTTT+AGG + chr7.3:16538885-16538904 None:intergenic 25.0%
!!! TTAACTGTTTTTTGACCTAT+TGG - chr7.3:16536502-16536521 MS.gene04696:intron 25.0%
!!! TTGAAATTTTAAGTGAAGTG+AGG - chr7.3:16535927-16535946 MS.gene04696:CDS 25.0%
!!! TTTTATTCTTGTTTGGACAT+TGG - chr7.3:16538806-16538825 MS.gene04696:intron 25.0%
!!! TTTTTTGACCTATTGGAAAT+AGG - chr7.3:16536509-16536528 MS.gene04696:intron 25.0%
!!! TTTTTTTTTTTTAAGGGACG+AGG - chr7.3:16538580-16538599 MS.gene04696:intron 25.0%
AAGTAGGTATTCTGTTGATA+TGG - chr7.3:16537678-16537697 MS.gene04696:CDS 30.0%
AATGTTAAAATGGTTATGCC+TGG - chr7.3:16539425-16539444 MS.gene04696:intron 30.0%
AGAGATATATGTACTCACAA+AGG - chr7.3:16539307-16539326 MS.gene04696:intron 30.0%
AGCATCTATTCAATATCAGT+TGG - chr7.3:16538387-16538406 MS.gene04696:intron 30.0%
ATAAATTCCTTGCATTGCAA+TGG - chr7.3:16538854-16538873 MS.gene04696:intron 30.0%
ATATCAACAGAATACCTACT+TGG + chr7.3:16537679-16537698 None:intergenic 30.0%
ATATTGAATAGATGCTGCAT+TGG + chr7.3:16538383-16538402 None:intergenic 30.0%
CATTAAATTATATACCGACC+TGG + chr7.3:16539500-16539519 None:intergenic 30.0%
CATTGAATTAAATACGAGCT+CGG - chr7.3:16538280-16538299 MS.gene04696:intron 30.0%
GAACAAGGAATCATCAAAAT+TGG - chr7.3:16538625-16538644 MS.gene04696:intron 30.0%
GATAACAAAAAAAGAACCCA+TGG + chr7.3:16538236-16538255 None:intergenic 30.0%
GGAATGAGCTCAAATAATTT+AGG - chr7.3:16536708-16536727 MS.gene04696:intron 30.0%
GGTCGGTATATAATTTAATG+AGG - chr7.3:16539500-16539519 MS.gene04696:intron 30.0%
GTATTCTCAATTCAGGTAAA+AGG - chr7.3:16538210-16538229 MS.gene04696:intron 30.0%
GTTCATTCTTATCATGAAGA+GGG + chr7.3:16537924-16537943 None:intergenic 30.0%
GTTGCCAGAAAATGTTAAAA+TGG - chr7.3:16539415-16539434 MS.gene04696:intron 30.0%
TATAAACGTAGCACTGTAAA+GGG - chr7.3:16536220-16536239 MS.gene04696:CDS 30.0%
TATTGAATAGATGCTGCATT+GGG + chr7.3:16538382-16538401 None:intergenic 30.0%
TATTTGTACATGAATTGTGC+AGG - chr7.3:16537770-16537789 MS.gene04696:intron 30.0%
TCTCAATACCTATTTCCAAT+AGG + chr7.3:16536520-16536539 None:intergenic 30.0%
TGAAGATGTATTCTCAATTC+AGG - chr7.3:16538203-16538222 MS.gene04696:intron 30.0%
TGAGTCATTTACTGGATTTA+TGG - chr7.3:16538689-16538708 MS.gene04696:intron 30.0%
TGGAAATAAAATGAGCATAG+CGG - chr7.3:16536817-16536836 MS.gene04696:intron 30.0%
TTATAAACGTAGCACTGTAA+AGG - chr7.3:16536219-16536238 MS.gene04696:CDS 30.0%
TTTGGTTAATTAGGGTTTAG+AGG - chr7.3:16535958-16535977 MS.gene04696:CDS 30.0%
! ATGTTGATTGAGTCATTTAC+TGG - chr7.3:16538681-16538700 MS.gene04696:intron 30.0%
! TTTAAAAAGCACACAAGAGA+TGG + chr7.3:16537804-16537823 None:intergenic 30.0%
!! GATTTGGTGTTTGGTTAATT+AGG - chr7.3:16535949-16535968 MS.gene04696:CDS 30.0%
!! TTACAGTACATGTTAGTCTT+GGG - chr7.3:16538314-16538333 MS.gene04696:intron 30.0%
!! TTTTAAGTGAAGTGAGGATT+TGG - chr7.3:16535933-16535952 MS.gene04696:CDS 30.0%
!!! AAGTTTTATTTTGGTAGCCT+TGG - chr7.3:16536776-16536795 MS.gene04696:intron 30.0%
!!! AGTTTTATTTTGGTAGCCTT+GGG - chr7.3:16536777-16536796 MS.gene04696:intron 30.0%
AAACACCCGATAAGACATTA+AGG + chr7.3:16537421-16537440 None:intergenic 35.0%
AAATGAGGAGATTGGAAGAA+AGG - chr7.3:16538098-16538117 MS.gene04696:intron 35.0%
AAGAAGACCAACATTATCAC+CGG + chr7.3:16539054-16539073 None:intergenic 35.0%
AAGAGGGATTACAATTGCTA+CGG - chr7.3:16536081-16536100 MS.gene04696:intron 35.0%
AAGGAGAGTAGATAAGATGA+AGG - chr7.3:16536968-16536987 MS.gene04696:intron 35.0%
AATGCTGAACCTCTAATGAT+AGG + chr7.3:16538060-16538079 None:intergenic 35.0%
ACATTCTGGATAGGAAATCA+AGG + chr7.3:16538535-16538554 None:intergenic 35.0%
AGACTTGACAAGATAGGATT+AGG - chr7.3:16536870-16536889 MS.gene04696:intron 35.0%
AGAGACAACAATGTTTGTCA+AGG + chr7.3:16538421-16538440 None:intergenic 35.0%
AGCATGCCTTAATGTCTTAT+CGG - chr7.3:16537412-16537431 MS.gene04696:intron 35.0%
AGGAGAGTAGATAAGATGAA+GGG - chr7.3:16536969-16536988 MS.gene04696:intron 35.0%
ATAAACGTAGCACTGTAAAG+GGG - chr7.3:16536221-16536240 MS.gene04696:CDS 35.0%
ATATGTACTCACAAAGGATG+AGG - chr7.3:16539313-16539332 MS.gene04696:intron 35.0%
ATGCTGAACCTCTAATGATA+GGG + chr7.3:16538059-16538078 None:intergenic 35.0%
CAATAAGTATGATGGCTACA+TGG + chr7.3:16537128-16537147 None:intergenic 35.0%
CCATCATACTTATTGTTGGT+GGG - chr7.3:16537133-16537152 MS.gene04696:CDS 35.0%
CTTATCATGAAGAGGGAAAA+GGG + chr7.3:16537917-16537936 None:intergenic 35.0%
CTTTCAGTATATTAAGCACG+AGG + chr7.3:16538737-16538756 None:intergenic 35.0%
GAGAAAATACCTGTAGAGTA+AGG - chr7.3:16536949-16536968 MS.gene04696:intron 35.0%
GAGAAATCGAATACTTACTC+TGG + chr7.3:16535885-16535904 None:intergenic 35.0%
GAGTTCCACAAATATCTATG+TGG + chr7.3:16536197-16536216 None:intergenic 35.0%
GATGATATCCCTATCATTAG+AGG - chr7.3:16538048-16538067 MS.gene04696:intron 35.0%
GGCGTTTGATGAAATTGATA+AGG - chr7.3:16536042-16536061 MS.gene04696:intron 35.0%
GGTTCATTCTTATCATGAAG+AGG + chr7.3:16537925-16537944 None:intergenic 35.0%
GTAGCCATCATACTTATTGT+TGG - chr7.3:16537129-16537148 MS.gene04696:CDS 35.0%
GTAGTAAGACTTGACAAGAT+AGG - chr7.3:16536864-16536883 MS.gene04696:intron 35.0%
GTTGTTAGAGCTTGTAGAAA+TGG - chr7.3:16537851-16537870 MS.gene04696:intron 35.0%
TATCTCTGCTTCAAATCTCT+TGG + chr7.3:16539294-16539313 None:intergenic 35.0%
TATGTACTCACAAAGGATGA+GGG - chr7.3:16539314-16539333 MS.gene04696:intron 35.0%
TCATGCCACATAGATATTTG+TGG - chr7.3:16536189-16536208 MS.gene04696:intron 35.0%
TCTTATCATGAAGAGGGAAA+AGG + chr7.3:16537918-16537937 None:intergenic 35.0%
TGAGATGTTCAAGAAGATGT+TGG - chr7.3:16538938-16538957 MS.gene04696:CDS 35.0%
TGCAACAGTAACTAACAAAG+AGG + chr7.3:16539140-16539159 None:intergenic 35.0%
TGCAATGTTATCCTCATCAT+AGG - chr7.3:16539612-16539631 MS.gene04696:CDS 35.0%
TGCTTTACAAGGTACAAATG+AGG - chr7.3:16538083-16538102 MS.gene04696:intron 35.0%
TTAGAGAGAGAATTACGTTC+TGG + chr7.3:16535725-16535744 None:intergenic 35.0%
TTCAAGAAGATGTTGGATCA+AGG - chr7.3:16538945-16538964 MS.gene04696:CDS 35.0%
! ACGCCGATTATGTTAAAGTA+AGG - chr7.3:16536400-16536419 MS.gene04696:intron 35.0%
! ATAGACCTCAGTTTTACTTG+AGG - chr7.3:16539366-16539385 MS.gene04696:intron 35.0%
! ATTAGCTTAATGACGCAAGA+TGG - chr7.3:16536615-16536634 MS.gene04696:intron 35.0%
! ATTGTTGGTGGGATAAGAAT+CGG - chr7.3:16537144-16537163 MS.gene04696:CDS 35.0%
! CTTACAGTACATGTTAGTCT+TGG - chr7.3:16538313-16538332 MS.gene04696:intron 35.0%
! GATTTTCACATTTTGTAGGC+CGG - chr7.3:16539032-16539051 MS.gene04696:intron 35.0%
! TCCTCATCAAATAGTGTTGA+TGG + chr7.3:16537492-16537511 None:intergenic 35.0%
!! AGAATGTGCTCTTTAGTTTG+AGG + chr7.3:16537647-16537666 None:intergenic 35.0%
!! CAAAATTGGTGATGAAGTTG+AGG - chr7.3:16538639-16538658 MS.gene04696:intron 35.0%
!! GTTTAGCCTTGAAATTGACA+CGG - chr7.3:16538356-16538375 MS.gene04696:intron 35.0%
!! TACAGTACATGTTAGTCTTG+GGG - chr7.3:16538315-16538334 MS.gene04696:intron 35.0%
!!! GACGTTGTCTTGTTTTGAAA+AGG - chr7.3:16539238-16539257 MS.gene04696:CDS 35.0%
!!! GTTTTATTTTGGTAGCCTTG+GGG - chr7.3:16536778-16536797 MS.gene04696:intron 35.0%
AAACGTGAAGACATTCAACG+TGG - chr7.3:16539086-16539105 MS.gene04696:intron 40.0%
AATTGAGACGAGAAGAGGAA+AGG + chr7.3:16535598-16535617 None:intergenic 40.0%
AGAAAGCCTCATGTTAACGT+CGG - chr7.3:16535809-16535828 MS.gene04696:intron 40.0%
ATAGTTCCGACGTTAACATG+AGG + chr7.3:16535818-16535837 None:intergenic 40.0%
ATCTACTCTCCTTACTCTAC+AGG + chr7.3:16536961-16536980 None:intergenic 40.0%
ATGCACTTTATGCTAGAGTG+TGG - chr7.3:16539646-16539665 MS.gene04696:CDS 40.0%
CAAAGATTTGCCTTGAGAGA+GGG - chr7.3:16539702-16539721 MS.gene04696:CDS 40.0%
CAAGGTACAAATGAGGAGAT+TGG - chr7.3:16538090-16538109 MS.gene04696:intron 40.0%
CAATTCAGGTAAAAGGCCAT+GGG - chr7.3:16538217-16538236 MS.gene04696:intron 40.0%
CATGTTAACGTCGGAACTAT+TGG - chr7.3:16535818-16535837 MS.gene04696:CDS 40.0%
CCCACCAACAATAAGTATGA+TGG + chr7.3:16537136-16537155 None:intergenic 40.0%
CCTTAGAAGCAAGGAAGTAA+CGG + chr7.3:16537737-16537756 None:intergenic 40.0%
CTCCTGAAGAGAAGAAAAGA+GGG - chr7.3:16536065-16536084 MS.gene04696:intron 40.0%
GAAAAGGTCATTGCTAAACC+CGG - chr7.3:16539254-16539273 MS.gene04696:CDS 40.0%
GAATGTTGACCTTAGAAGCA+AGG + chr7.3:16537746-16537765 None:intergenic 40.0%
GCATGCCTTAATGTCTTATC+GGG - chr7.3:16537413-16537432 MS.gene04696:intron 40.0%
GCCATCAACACTATTTGATG+AGG - chr7.3:16537488-16537507 MS.gene04696:CDS 40.0%
GCCATCATACTTATTGTTGG+TGG - chr7.3:16537132-16537151 MS.gene04696:CDS 40.0%
GGATTACAATTGCTACGGTT+CGG - chr7.3:16536086-16536105 MS.gene04696:intron 40.0%
GGGGCGGTAAAAAACTAATA+TGG - chr7.3:16536797-16536816 MS.gene04696:intron 40.0%
GTGAGAGGTGATTGAGAAAT+CGG + chr7.3:16535643-16535662 None:intergenic 40.0%
TCAAACGACGCCATAATGTT+CGG + chr7.3:16537104-16537123 None:intergenic 40.0%
TCAATTCAGGTAAAAGGCCA+TGG - chr7.3:16538216-16538235 MS.gene04696:intron 40.0%
TCAGCATTGTCTGCTTTACA+AGG - chr7.3:16538072-16538091 MS.gene04696:intron 40.0%
TCTTAGAGAAAAACCCACCA+CGG + chr7.3:16537881-16537900 None:intergenic 40.0%
TCTTCAATGGGCATCAAGAA+AGG + chr7.3:16538189-16538208 None:intergenic 40.0%
TGACCTTCTACAAGTTTCCA+GGG - chr7.3:16538025-16538044 MS.gene04696:intron 40.0%
TGTACATGAATTGTGCAGGT+TGG - chr7.3:16537774-16537793 MS.gene04696:intron 40.0%
TTGACCTATCGTAGAAAAGC+TGG - chr7.3:16536894-16536913 MS.gene04696:intron 40.0%
TTGACCTTCTACAAGTTTCC+AGG - chr7.3:16538024-16538043 MS.gene04696:intron 40.0%
TTGAGTATGAGACTGCGAAA+AGG - chr7.3:16536349-16536368 MS.gene04696:CDS 40.0%
TTTGATGAGGAATGCTTCTG+CGG - chr7.3:16537501-16537520 MS.gene04696:CDS 40.0%
! ACTAAGTTTTTCCTGTAGGG+TGG - chr7.3:16538888-16538907 MS.gene04696:intron 40.0%
! ATCCCTCTTTTCTTCTCTTC+AGG + chr7.3:16536070-16536089 None:intergenic 40.0%
! CCTCTGAAAACAACAGTTAC+TGG - chr7.3:16538912-16538931 MS.gene04696:CDS 40.0%
! GGTGATGAAGTTGAGGTTTT+GGG - chr7.3:16538646-16538665 MS.gene04696:intron 40.0%
! TCTACAAGCTCTAACAACTC+TGG + chr7.3:16537849-16537868 None:intergenic 40.0%
! TTTGCTGTGTCTCAGATAAC+AGG - chr7.3:16537363-16537382 MS.gene04696:intron 40.0%
!! TCAAGAAAGGCTTTTCAAGC+TGG + chr7.3:16538176-16538195 None:intergenic 40.0%
!! TGAAGTGAGGATTTGGTGTT+TGG - chr7.3:16535940-16535959 MS.gene04696:CDS 40.0%
!! TGCTCTTTAGTTTGAGGCAT+TGG + chr7.3:16537641-16537660 None:intergenic 40.0%
!! TGGTGATGAAGTTGAGGTTT+TGG - chr7.3:16538645-16538664 MS.gene04696:intron 40.0%
!! TTCTGGCAACTCTACTTTTC+CGG + chr7.3:16539405-16539424 None:intergenic 40.0%
!!! ATTAGTTTTTTACCGCCCCA+AGG + chr7.3:16536796-16536815 None:intergenic 40.0%
!!! CCAGTAACTGTTGTTTTCAG+AGG + chr7.3:16538915-16538934 None:intergenic 40.0%
AAACTCAGCTTAGGTGGTCT+GGG - chr7.3:16536920-16536939 MS.gene04696:intron 45.0%
AAGCAGCAGACATGACATTC+TGG + chr7.3:16538549-16538568 None:intergenic 45.0%
AAGGAATGGAGGAGGAAGAA+TGG + chr7.3:16535678-16535697 None:intergenic 45.0%
AAGGATACCACCGTCCATTT+GGG + chr7.3:16537597-16537616 None:intergenic 45.0%
ACAATTACGAGGACGACTAC+AGG + chr7.3:16537958-16537977 None:intergenic 45.0%
ACAGCAGTAACATTGTCTCC+AGG + chr7.3:16539446-16539465 None:intergenic 45.0%
ACCTATCGTAGAAAAGCTGG+TGG - chr7.3:16536897-16536916 MS.gene04696:intron 45.0%
ACGACTACAGGAAGTTACGA+AGG + chr7.3:16537946-16537965 None:intergenic 45.0%
ACTATTGGACACGTGGATCA+CGG - chr7.3:16535833-16535852 MS.gene04696:CDS 45.0%
AGGAATGGAGGAGGAAGAAT+GGG + chr7.3:16535677-16535696 None:intergenic 45.0%
ATATACCGACCTGGTTCAAG+TGG + chr7.3:16539491-16539510 None:intergenic 45.0%
ATCATGAAGAGGGAAAAGGG+TGG + chr7.3:16537914-16537933 None:intergenic 45.0%
ATCCCCTGGAAACTTGTAGA+AGG + chr7.3:16538031-16538050 None:intergenic 45.0%
ATGATAGGGATATCATCCCC+TGG + chr7.3:16538045-16538064 None:intergenic 45.0%
ATTCTTCCTCCTCCATTCCT+TGG - chr7.3:16535677-16535696 MS.gene04696:intron 45.0%
ATTGGGCCGTGTCAATTTCA+AGG + chr7.3:16538365-16538384 None:intergenic 45.0%
CATCAGGTGCAGATACAACA+AGG + chr7.3:16537616-16537635 None:intergenic 45.0%
CCGTTACTTCCTTGCTTCTA+AGG - chr7.3:16537734-16537753 MS.gene04696:intron 45.0%
GAAGATGTTGGATCAAGGAC+AGG - chr7.3:16538950-16538969 MS.gene04696:CDS 45.0%
GACCTTCTACAAGTTTCCAG+GGG - chr7.3:16538026-16538045 MS.gene04696:intron 45.0%
GCAAAGATTTGCCTTGAGAG+AGG - chr7.3:16539701-16539720 MS.gene04696:CDS 45.0%
GCACTGTAAAGGGGTTTGAT+TGG - chr7.3:16536230-16536249 MS.gene04696:CDS 45.0%
GCAGACATGACATTCTGGAT+AGG + chr7.3:16538544-16538563 None:intergenic 45.0%
GCAGTCCTCAAGTAAAACTG+AGG + chr7.3:16539374-16539393 None:intergenic 45.0%
GCTCCTGAAGAGAAGAAAAG+AGG - chr7.3:16536064-16536083 MS.gene04696:intron 45.0%
GGAAACACCATTGCAATGCA+AGG + chr7.3:16538864-16538883 None:intergenic 45.0%
TAACATAATCGGCGTGTCCA+GGG + chr7.3:16536395-16536414 None:intergenic 45.0%
TACTCACAAAGGATGAGGGT+GGG - chr7.3:16539318-16539337 MS.gene04696:intron 45.0%
TCATGAAGAGGGAAAAGGGT+GGG + chr7.3:16537913-16537932 None:intergenic 45.0%
TGAAGACATTCAACGTGGTC+AGG - chr7.3:16539091-16539110 MS.gene04696:intron 45.0%
TGAAGGGAAAGCAAAAGCTG+TGG - chr7.3:16536021-16536040 MS.gene04696:CDS 45.0%
TGTCTTCACGTTTCAGACCA+CGG + chr7.3:16539079-16539098 None:intergenic 45.0%
TGTGGAATTGAGACGAGAAG+AGG + chr7.3:16535603-16535622 None:intergenic 45.0%
TTAACATAATCGGCGTGTCC+AGG + chr7.3:16536396-16536415 None:intergenic 45.0%
! CTTGGATGCTTTTGTAGCAC+CGG + chr7.3:16539276-16539295 None:intergenic 45.0%
! CTTGTTGTATCTGCACCTGA+TGG - chr7.3:16537614-16537633 MS.gene04696:intron 45.0%
! TCCACCAGCTTTTCTACGAT+AGG + chr7.3:16536901-16536920 None:intergenic 45.0%
! TGTAGGTGCTTGCTGATGAA+GGG - chr7.3:16536005-16536024 MS.gene04696:CDS 45.0%
! TTGGATGCTTTTGTAGCACC+GGG + chr7.3:16539275-16539294 None:intergenic 45.0%
! TTGTAGGCCGGTGATAATGT+TGG - chr7.3:16539044-16539063 MS.gene04696:intron 45.0%
! TTGTAGGTGCTTGCTGATGA+AGG - chr7.3:16536004-16536023 MS.gene04696:CDS 45.0%
!! AATGTTGGTCTTCTTCTCCG+TGG - chr7.3:16539059-16539078 MS.gene04696:intron 45.0%
!! ATTCTTCTAGCTCGCCAAGT+AGG - chr7.3:16537662-16537681 MS.gene04696:CDS 45.0%
!!! TGAGGTTTTGGGTATGACAC+AGG - chr7.3:16538657-16538676 MS.gene04696:intron 45.0%
!!! TTATTTTGGTAGCCTTGGGG+CGG - chr7.3:16536781-16536800 MS.gene04696:intron 45.0%
AGATTTGCCTTGAGAGAGGG+TGG - chr7.3:16539705-16539724 MS.gene04696:CDS 50.0%
AGCTGGTGGAAACTCAGCTT+AGG - chr7.3:16536911-16536930 MS.gene04696:intron 50.0%
CAAGGATACCACCGTCCATT+TGG + chr7.3:16537598-16537617 None:intergenic 50.0%
CATGGATCTCCACCAAGGAA+TGG + chr7.3:16535692-16535711 None:intergenic 50.0%
CATTCCTTGGTGGAGATCCA+TGG - chr7.3:16535690-16535709 MS.gene04696:intron 50.0%
CGTTCTGGTGAAAGTAGCCA+TGG + chr7.3:16535710-16535729 None:intergenic 50.0%
CTGTTCCACTTGAACCAGGT+CGG - chr7.3:16539483-16539502 MS.gene04696:CDS 50.0%
CTTGTAGAAATGGAGCTCCG+TGG - chr7.3:16537861-16537880 MS.gene04696:intron 50.0%
GAAACTCAGCTTAGGTGGTC+TGG - chr7.3:16536919-16536938 MS.gene04696:intron 50.0%
GATTACTGGAGCTGCCCAAA+TGG - chr7.3:16537580-16537599 MS.gene04696:intron 50.0%
GCTACTGGTCGTGTTGAACA+AGG - chr7.3:16538610-16538629 MS.gene04696:intron 50.0%
GGAAGAATGGGTAGCGTCAT+CGG + chr7.3:16535665-16535684 None:intergenic 50.0%
GGTGATTGCAGCAGTTAGTG+TGG + chr7.3:16535864-16535883 None:intergenic 50.0%
GTACTCACAAAGGATGAGGG+TGG - chr7.3:16539317-16539336 MS.gene04696:intron 50.0%
GTGAACGAGTGAGAGAAGTG+TGG + chr7.3:16535621-16535640 None:intergenic 50.0%
TAGAAATGGAGCTCCGTGGT+GGG - chr7.3:16537865-16537884 MS.gene04696:intron 50.0%
TGGTGGAAACTCAGCTTAGG+TGG - chr7.3:16536914-16536933 MS.gene04696:intron 50.0%
TTGAGGACTGCTGATGTCAC+CGG - chr7.3:16539383-16539402 MS.gene04696:intron 50.0%
! AGAGTTTCTGAGAGCGAGTG+AGG + chr7.3:16535557-16535576 None:intergenic 50.0%
! TATGCTCATGTTGACTGCCC+TGG - chr7.3:16536375-16536394 MS.gene04696:CDS 50.0%
! TTTTCAGAGGACCACCCTAC+AGG + chr7.3:16538902-16538921 None:intergenic 50.0%
!! GCTTTTCAAGCTGGCGAACA+GGG + chr7.3:16538167-16538186 None:intergenic 50.0%
!! GTTTGAGGCATTGGTCCATC+AGG + chr7.3:16537632-16537651 None:intergenic 50.0%
ACTGGAGCTGCCCAAATGGA+CGG - chr7.3:16537584-16537603 MS.gene04696:intron 55.0%
AGAGAGGGTGGCAGAACAGT+TGG - chr7.3:16539717-16539736 MS.gene04696:CDS 55.0%
CGACCTGGTTCAAGTGGAAC+AGG + chr7.3:16539485-16539504 None:intergenic 55.0%
CGTCGGAACTATTGGACACG+TGG - chr7.3:16535826-16535845 MS.gene04696:CDS 55.0%
CTTCCTCCTCCATTCCTTGG+TGG - chr7.3:16535680-16535699 MS.gene04696:intron 55.0%
GAAGAGGGAAAAGGGTGGGA+AGG + chr7.3:16537909-16537928 None:intergenic 55.0%
GGACGAGGAACAGTTGCTAC+TGG - chr7.3:16538595-16538614 MS.gene04696:intron 55.0%
GGATCTCCACCAAGGAATGG+AGG + chr7.3:16535689-16535708 None:intergenic 55.0%
GTAGAAATGGAGCTCCGTGG+TGG - chr7.3:16537864-16537883 MS.gene04696:intron 55.0%
GTAGCCATGGATCTCCACCA+AGG + chr7.3:16535697-16535716 None:intergenic 55.0%
GTGCCTGTTCCACTTGAACC+AGG - chr7.3:16539479-16539498 MS.gene04696:CDS 55.0%
TCTCCACCAAGGAATGGAGG+AGG + chr7.3:16535686-16535705 None:intergenic 55.0%
TGTTCTGCCACCCTCTCTCA+AGG + chr7.3:16539715-16539734 None:intergenic 55.0%
! CAGAACAGTTGGTGCAGGTG+TGG - chr7.3:16539728-16539747 MS.gene04696:CDS 55.0%
!! GGCTTTTCAAGCTGGCGAAC+AGG + chr7.3:16538168-16538187 None:intergenic 55.0%
GCTTAGGTGGTCTGGGCTTG+TGG - chr7.3:16536927-16536946 MS.gene04696:intron 60.0%
TCAAGCTGGCGAACAGGGTC+AGG + chr7.3:16538162-16538181 None:intergenic 60.0%
TGGGTAGCGTCATCGGTGAG+AGG + chr7.3:16535658-16535677 None:intergenic 60.0%
! GGTGGCAGAACAGTTGGTGC+AGG - chr7.3:16539723-16539742 MS.gene04696:CDS 60.0%
GGAGCTGCCCAAATGGACGG+TGG - chr7.3:16537587-16537606 MS.gene04696:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 16535547 16539770 16535547 ID=MS.gene04696
chr7.3 mRNA 16535547 16539770 16535547 ID=MS.gene04696.t1;Parent=MS.gene04696
chr7.3 exon 16539589 16539770 16539589 ID=MS.gene04696.t1.exon1;Parent=MS.gene04696.t1
chr7.3 CDS 16539589 16539770 16539589 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16539431 16539506 16539431 ID=MS.gene04696.t1.exon2;Parent=MS.gene04696.t1
chr7.3 CDS 16539431 16539506 16539431 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16539215 16539307 16539215 ID=MS.gene04696.t1.exon3;Parent=MS.gene04696.t1
chr7.3 CDS 16539215 16539307 16539215 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16538901 16538975 16538901 ID=MS.gene04696.t1.exon4;Parent=MS.gene04696.t1
chr7.3 CDS 16538901 16538975 16538901 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16537638 16537742 16537638 ID=MS.gene04696.t1.exon5;Parent=MS.gene04696.t1
chr7.3 CDS 16537638 16537742 16537638 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16537435 16537525 16537435 ID=MS.gene04696.t1.exon6;Parent=MS.gene04696.t1
chr7.3 CDS 16537435 16537525 16537435 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16537093 16537298 16537093 ID=MS.gene04696.t1.exon7;Parent=MS.gene04696.t1
chr7.3 CDS 16537093 16537298 16537093 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16536639 16536722 16536639 ID=MS.gene04696.t1.exon8;Parent=MS.gene04696.t1
chr7.3 CDS 16536639 16536722 16536639 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16536346 16536411 16536346 ID=MS.gene04696.t1.exon9;Parent=MS.gene04696.t1
chr7.3 CDS 16536346 16536411 16536346 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16536205 16536267 16536205 ID=MS.gene04696.t1.exon10;Parent=MS.gene04696.t1
chr7.3 CDS 16536205 16536267 16536205 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16535817 16536057 16535817 ID=MS.gene04696.t1.exon11;Parent=MS.gene04696.t1
chr7.3 CDS 16535817 16536057 16535817 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
chr7.3 exon 16535547 16535617 16535547 ID=MS.gene04696.t1.exon12;Parent=MS.gene04696.t1
chr7.3 CDS 16535547 16535617 16535547 ID=cds.MS.gene04696.t1;Parent=MS.gene04696.t1
Gene Sequence

>MS.gene04696

ATGGCTACCTCACTCGCTCTCAGAAACTCTTCTTCTAAACGTCTTTCACCTTTCCTCTTCTCGTCTCAATTCCACACTTCTCTCACTCGTTCACCGATTTCTCAATCACCTCTCACCGATGACGCTACCCATTCTTCCTCCTCCATTCCTTGGTGGAGATCCATGGCTACTTTCACCAGAACGTAATTCTCTCTCTAACACTTTCTCTCTTTTCAATTTTTCGAAATCTGAACTATTGAATTTGTTATTGTTTTTTGTTTGCAGAAAGCCTCATGTTAACGTCGGAACTATTGGACACGTGGATCACGGAAAAACCACACTAACTGCTGCAATCACCAGAGTAAGTATTCGATTTCTCCGATTTATTGTTTTGATGTTAATTGAAATTTTAAGTGAAGTGAGGATTTGGTGTTTGGTTAATTAGGGTTTAGAGGTGACGAAATTGATTGATTTTATTTTGTAGGTGCTTGCTGATGAAGGGAAAGCAAAAGCTGTGGCGTTTGATGAAATTGATAAGGCTCCTGAAGAGAAGAAAAGAGGGATTACAATTGCTACGGTTCGGATTTTGTTTTTTGTTGCATTTTGTTTGTTTTGTGTTTTGCGTTTTGAGATTAATTTTATACGCACATGCATTTAATCAAATCATGCCACATAGATATTTGTGGAACTCTCTTATAAACGTAGCACTGTAAAGGGGTTTGATTGGATATATGTGTAACAAAAAGTTTTACACTGTCGGTGCATCCTTGTTTGTTTTTTTATGGCAATGTAACTAATTGTTTGTTTAATTTTCAGGCACATGTTGAGTATGAGACTGCGAAAAGGCATTATGCTCATGTTGACTGCCCTGGACACGCCGATTATGTTAAAGTAAGGTTTACATTTGGAAAAATATCTCCAATAAATGTATTGTTTATGATTTAATTTCTATACAGTACTTTATATATATATATGTTTAACTGTTTTTTGACCTATTGGAAATAGGTATTGAGAAGTGATGTTTTGATGTTAAAATATGATTGGATATTGTGCTTTACACTATCTGTTTTTATATATACTTGCTAATTAATTAGCTTAATGACGCAAGATGGCTATGTTTTTAAGATTTATGAAGCGGTTGAATATTTTTTTACCCAAGGATTATTTATAATTAAAGGTGGTGGAATGAGCTCAAATAATTTAGGCTTTAACACAATTATGTATTTGATCCATGTCATAGAGATTTGATTAAGTTTTATTTTGGTAGCCTTGGGGCGGTAAAAAACTAATATGGAAATAAAATGAGCATAGCGGATATGAGAATGTTGCATTGAATATGTAGTAAGACTTGACAAGATAGGATTAGGATTGACCTATCGTAGAAAAGCTGGTGGAAACTCAGCTTAGGTGGTCTGGGCTTGTGGAGAAAATACCTGTAGAGTAAGGAGAGTAGATAAGATGAAGGGATGTTGAAAATCTGTAAGAGAAATTATTAAGAAAGACCTAAAAATTAATGAGTTTTTAATATATATATATATATATATATATATATATATATATATATATATATATACACCGAACATTATGGCGTCGTTTGATCCATGTAGCCATCATACTTATTGTTGGTGGGATAAGAATCGGTTGTTCGTTGTTGTTGTATGTTTTAACAGAATTCTCAATATTGTCAATTTGGGTGTTTGTGTAACTCCATCCTCTATTAAAATTGAAAATGCAAAGGAGAATTCAGATTAGTATGTATCTATTTCTAATTCTAATTCTAACCATAATATGTAAGGTATTAAAAAAATAAAAAGGTCACTTAAAAGTTTGTCATCGTTTTGCTGTGTCTCAGATAACAGGTTTGTGTTGCGCAGCTTAAGTATTACAGCATGCCTTAATGTCTTATCGGGTGTTTCTATATTTGTCTTCTTTTATGTAAATCAGAAAATGATTTTTTTTTCAGCCATCAACACTATTTGATGAGGAATGCTTCTGCGGTTTTGCGTTTGTTCAGTTATGCATTTATTAAATAATTGTTTGTTTTTGCAGAATATGATTACTGGAGCTGCCCAAATGGACGGTGGTATCCTTGTTGTATCTGCACCTGATGGACCAATGCCTCAAACTAAAGAGCACATTCTTCTAGCTCGCCAAGTAGGTATTCTGTTGATATGGTTTGTAAACAATAAATGCAAACTTTTAGGTCTACCGTTACTTCCTTGCTTCTAAGGTCAACATTCATTTTATTTGTACATGAATTGTGCAGGTTGGTGTGCCATCTCTTGTGTGCTTTTTAAATAAAGTTGATGCTGTAGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTCCGTGGTGGGTTTTTCTCTAAGATTTCACCTTCCCACCCTTTTCCCTCTTCATGATAAGAATGAACCTTCGTAACTTCCTGTAGTCGTCCTCGTAATTGTTAAATTTTGAAGTTGATTTTTGTTAATCATCTATCTGGCAGAGCTTTTGACCTTCTACAAGTTTCCAGGGGATGATATCCCTATCATTAGAGGTTCAGCATTGTCTGCTTTACAAGGTACAAATGAGGAGATTGGAAGAAAGGCCATTTTAAAATTAATGGATGCTGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGAAAAGCCTTTCTTGATGCCCATTGAAGATGTATTCTCAATTCAGGTAAAAGGCCATGGGTTCTTTTTTTGTTATCTTAAATTTTTGAAGAATGCCAACTCATTGAATTAAATACGAGCTCGGTTATTGTATTCTTACAGTACATGTTAGTCTTGGGGTATTTTTAATCATTTGTTGTTTAGCCTTGAAATTGACACGGCCCAATGCAGCATCTATTCAATATCAGTTGGATGCGATACCTTGACAAACATTGTTGTCTCTTTTGTTCAATTTTTTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATATCAAAGTATCTCAATCTACCTTGATTTCCTATCCAGAATGTCATGTCTGCTGCTTTACATTTTTAATTTTTTTTTTTTAAGGGACGAGGAACAGTTGCTACTGGTCGTGTTGAACAAGGAATCATCAAAATTGGTGATGAAGTTGAGGTTTTGGGTATGACACAGGTATGTTGATTGAGTCATTTACTGGATTTATGGCTGTTCTTGAATTCTCGTCATTCCTCGTGCTTAATATACTGAAAGCTGATTTATTTTAATTATATATTTTATTTGCTGTTGGTGATGATTAATGTTTTATTCTTGTTTGGACATTGGTCAGTTTTTTATTATCAGAGTTTTGATAAATTCCTTGCATTGCAATGGTGTTTCCTAAAACTAAGTTTTTCCTGTAGGGTGGTCCTCTGAAAACAACAGTTACTGGAGTTGAGATGTTCAAGAAGATGTTGGATCAAGGACAGGTAAGTTACTGTTATCTTCATATTGAGAGATATTTACATAGTGTATATTAAACTAATATGGATTTTCACATTTTGTAGGCCGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTGAAACGTGAAGACATTCAACGTGGTCAGGTTAGAAGAAATGAACAAGCTTTTCCTCTTTGTTAGTTACTGTTGCAAGATTGAAGAGAACTTTATATTAATCTGTTCTTGTTTCAGTAGAAATTTGTAGAGTTCTCAAATTAAAATGCTAGACTGACGTTGTCTTGTTTTGAAAAGGTCATTGCTAAACCCGGTGCTACAAAAGCATCCAAGAGATTTGAAGCAGAGATATATGTACTCACAAAGGATGAGGGTGGGCGACACACTGCTTTCTTCTCTAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATGTCACCGGAAAAGTAGAGTTGCCAGAAAATGTTAAAATGGTTATGCCTGGAGACAATGTTACTGCTGTGTTTGAATTGATCGTGCCTGTTCCACTTGAACCAGGTCGGTATATAATTTAATGAGGATGTCATTCATTTTTTTTCTTTTATTAAAAAGGACAATAAGGATGTTGTTTTTGCATGTTACTCAATCAACTCCCATTTTTTCATATGTTGCAATGTTATCCTCATCATAGGTTGAATTTATTATGCACTTTATGCTAGAGTGTGGAAAGCTCACCACTTGTTATTTTATTTTACAGGGCAAAGATTTGCCTTGAGAGAGGGTGGCAGAACAGTTGGTGCAGGTGTGGTGTCGAAAGTGATTAGCTGA
Protein sequence

>MS.gene04696.t1

MATSLALRNSSSKRLSPFLFSSQFHTSLTRSPISQSPLTDDATHSSSSIPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGIIKIGDEVEVLGMTQGGPLKTTVTGVEMFKKMLDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGATKASKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELIVPVPLEPGQRFALREGGRTVGAGVVSKVIS