AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72917

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72917.t1 MTR_7g094460 99.111 450 3 1 1 450 1 449 0.0 909
MS.gene72917.t1 MTR_2g021300 79.263 434 83 1 17 450 10 436 0.0 712
MS.gene72917.t1 MTR_3g076660 61.039 462 145 7 5 449 45 488 2.27e-175 500
MS.gene72917.t1 MTR_3g072130 66.524 233 55 3 219 450 101 311 1.85e-98 298
MS.gene72917.t1 MTR_3g072130 59.615 104 34 3 18 121 6 101 8.24e-21 93.2
MS.gene72917.t1 MTR_1g095703 30.137 438 246 14 60 448 3 429 9.05e-46 165
MS.gene72917.t1 MTR_1g495705 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene72917.t1 MTR_1g095650 30.137 438 246 14 60 448 3 429 1.03e-45 164
MS.gene72917.t1 MTR_6g021800 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene72917.t1 MTR_6g021805 30.137 438 246 14 60 448 3 429 1.15e-45 164
MS.gene72917.t1 MTR_4g014810 29.909 438 247 14 60 448 3 429 2.69e-45 163
MS.gene72917.t1 MTR_1g085410 30.345 435 243 14 60 445 3 426 4.27e-42 155
MS.gene72917.t1 MTR_1g013680 29.864 442 245 16 60 448 3 432 9.81e-41 151
MS.gene72917.t1 MTR_1g024175 28.899 436 256 14 59 448 2 429 1.17e-37 143
MS.gene72917.t1 MTR_1g101870 29.748 437 248 16 58 448 1 424 1.28e-37 146
MS.gene72917.t1 MTR_1g101870 29.977 437 247 17 58 448 1 424 1.48e-37 146
MS.gene72917.t1 MTR_8g087950 29.545 440 248 16 61 449 272 700 3.54e-37 144
MS.gene72917.t1 MTR_8g087950 29.545 440 248 16 61 449 345 773 5.87e-37 144
MS.gene72917.t1 MTR_2g082730 30.162 431 234 18 61 445 4 413 3.72e-34 134
MS.gene72917.t1 MTR_8g014590 27.945 433 254 12 65 448 8 431 4.28e-33 130
MS.gene72917.t1 MTR_8g008740 31.056 322 183 9 58 348 1 314 7.37e-32 127
MS.gene72917.t1 MTR_5g037350 27.177 379 229 15 102 445 107 473 4.23e-27 114
MS.gene72917.t1 MTR_8g106700 27.455 448 239 18 62 446 50 474 5.49e-27 113
MS.gene72917.t1 MTR_8g106700 27.455 448 239 18 62 446 44 468 5.73e-27 113
MS.gene72917.t1 MTR_1g095650 28.909 339 196 13 144 448 1 328 1.25e-26 110
MS.gene72917.t1 MTR_8g106700 27.455 448 239 18 62 446 71 495 1.29e-26 112
MS.gene72917.t1 MTR_6g080420 27.765 443 244 18 62 446 89 513 1.31e-26 112
MS.gene72917.t1 MTR_2g082665 28.438 429 218 18 61 445 4 387 3.95e-25 108
MS.gene72917.t1 MTR_2g080210 32.828 198 106 6 62 235 7 201 1.22e-23 103
MS.gene72917.t1 MTR_2g037420 25.346 434 237 16 58 448 1 390 6.25e-23 101
MS.gene72917.t1 MTR_4g079360 30.100 299 187 9 17 300 4 295 3.02e-21 97.1
MS.gene72917.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 8.62e-18 85.9
MS.gene72917.t1 MTR_8g013910 25.982 331 188 10 60 352 3 314 1.89e-17 84.7
MS.gene72917.t1 MTR_1g052535 26.842 380 232 16 2 357 16 373 2.08e-17 85.1
MS.gene72917.t1 MTR_1g101880 32.667 150 73 3 65 189 8 154 2.14e-17 82.4
MS.gene72917.t1 MTR_2g069440 23.810 525 259 20 20 443 142 626 1.48e-15 79.3
MS.gene72917.t1 MTR_2g075870 27.083 288 125 11 65 299 33 288 2.64e-15 78.2
MS.gene72917.t1 MTR_2g069440 26.207 290 125 11 65 299 33 288 4.25e-15 77.4
MS.gene72917.t1 MTR_1g024165 31.159 138 73 3 65 180 12 149 9.67e-14 68.9
MS.gene72917.t1 MTR_3g097250 28.571 245 142 8 66 301 85 305 9.61e-13 70.9
MS.gene72917.t1 MTR_2g064840 29.386 228 138 6 70 297 502 706 1.12e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72917.t1 AT4G02930 85.463 454 57 5 4 450 3 454 0.0 748
MS.gene72917.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene72917.t1 AT4G20360 61.339 463 150 7 4 449 25 475 1.22e-179 511
MS.gene72917.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT5G60390 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07920 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07940 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT1G07930 30.046 436 249 13 60 448 3 429 4.24e-45 163
MS.gene72917.t1 AT5G10630 28.035 453 256 14 52 449 227 664 1.11e-33 134
MS.gene72917.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene72917.t1 AT5G10630 28.035 453 256 14 52 449 228 665 1.12e-33 134
MS.gene72917.t1 AT5G10630 28.035 453 256 14 52 449 303 740 1.22e-33 134
MS.gene72917.t1 AT5G10630 28.035 453 256 14 52 449 298 735 1.41e-33 134
MS.gene72917.t1 AT1G07930 33.721 258 135 7 60 286 3 255 1.07e-32 127
MS.gene72917.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene72917.t1 AT1G18070 26.932 453 243 18 62 450 99 527 8.32e-29 119
MS.gene72917.t1 AT1G18070 26.293 464 243 19 62 450 99 538 6.41e-26 110
MS.gene72917.t1 AT2G31060 31.707 287 167 9 66 333 61 337 1.91e-21 97.8
MS.gene72917.t1 AT2G31060 31.615 291 166 10 66 333 61 341 6.34e-21 96.3
MS.gene72917.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene72917.t1 AT2G18720 25.672 335 188 11 65 353 39 358 1.32e-19 91.3
MS.gene72917.t1 AT4G18330 26.549 339 182 12 65 353 40 361 2.14e-18 87.8
MS.gene72917.t1 AT4G18330 28.455 246 129 9 65 280 40 268 8.27e-16 78.2
MS.gene72917.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene72917.t1 AT1G04170 26.374 273 146 8 65 299 34 289 4.85e-15 77.4
MS.gene72917.t1 AT5G13650 25.150 334 223 11 29 350 48 366 7.64e-15 77.4
MS.gene72917.t1 AT2G18720 26.923 260 155 9 116 353 21 267 1.05e-14 75.9
MS.gene72917.t1 AT5G13650 25.926 297 194 10 66 350 85 367 2.34e-14 75.9
MS.gene72917.t1 AT5G08650 30.126 239 138 9 66 297 88 304 6.05e-13 71.2
MS.gene72917.t1 AT5G08650 30.126 239 138 9 66 297 88 304 7.62e-13 71.2

Find 104 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCCAGAAAATGTTAAAA+TGG 0.264941 7.4:-14777163 MS.gene72917:CDS
GAACAAGGAATCATCAAAAT+TGG 0.282024 7.4:-14777971 MS.gene72917:CDS
TGAAGATGTATTCTCAATTC+AGG 0.301803 7.4:-14778375 MS.gene72917:intron
GTTGTTAGAGCTTGTAGAAA+TGG 0.312590 7.4:-14778727 MS.gene72917:CDS
AAACCTTACTTTAACATAAT+CGG 0.325466 7.4:+14780177 None:intergenic
CATGTTAACGTCGGAACTAT+TGG 0.338907 7.4:-14780721 MS.gene72917:CDS
CAAGGATACCACCGTCCATT+TGG 0.339574 7.4:+14778983 None:intergenic
TTGACCTTCTACAAGTTTCC+AGG 0.348867 7.4:-14778554 MS.gene72917:CDS
CCTCTGAAAACAACAGTTAC+TGG 0.352891 7.4:-14777683 MS.gene72917:CDS
TGCTCTTTAGTTTGAGGCAT+TGG 0.362727 7.4:+14778940 None:intergenic
ATTCTTCCTCCTCCATTCCT+TGG 0.362758 7.4:-14780862 MS.gene72917:CDS
AATGCTGAACCTCTAATGAT+AGG 0.371728 7.4:+14778521 None:intergenic
TGGTGATGAAGTTGAGGTTT+TGG 0.379753 7.4:-14777951 MS.gene72917:CDS
AATTGAGAATACATCTTCAA+TGG 0.404677 7.4:+14778379 None:intergenic
TCAAGCTGGCGAACAGGGTC+AGG 0.406901 7.4:+14778419 None:intergenic
GTTTGAGGCATTGGTCCATC+AGG 0.416974 7.4:+14778949 None:intergenic
AGAATGTGCTCTTTAGTTTG+AGG 0.417591 7.4:+14778934 None:intergenic
CAAGGTACAAATGAGGAGAT+TGG 0.421220 7.4:-14778488 MS.gene72917:CDS
GTGAGAGGTGATTGAGAAAT+CGG 0.424813 7.4:+14780899 None:intergenic
TATCTCTGCTTCAAATCTCT+TGG 0.432334 7.4:+14777287 None:intergenic
CTTCCTCCTCCATTCCTTGG+TGG 0.434975 7.4:-14780859 MS.gene72917:CDS
CGACCTGGTTCAAGTGGAAC+AGG 0.446547 7.4:+14777096 None:intergenic
AAGGATACCACCGTCCATTT+GGG 0.446849 7.4:+14778984 None:intergenic
GATGATATCCCTATCATTAG+AGG 0.453307 7.4:-14778530 MS.gene72917:CDS
CAAAATTGGTGATGAAGTTG+AGG 0.481713 7.4:-14777957 MS.gene72917:CDS
GATTACTGGAGCTGCCCAAA+TGG 0.484093 7.4:-14778998 MS.gene72917:CDS
TGTGGAATTGAGAGGAGAAG+AGG 0.484183 7.4:+14780939 None:intergenic
AATGTTAAAATGGTTATGCC+TGG 0.486949 7.4:-14777153 MS.gene72917:CDS
TTAACATAATCGGCATGTCC+AGG 0.487540 7.4:+14780187 None:intergenic
GCAAAGATTTGCCTTGAGAG+AGG 0.493777 7.4:-14776877 MS.gene72917:CDS
TGAAGACATTCAGCGTGGTC+AGG 0.494620 7.4:-14777504 MS.gene72917:intron
AAATGAGGAGATTGGAAGAA+AGG 0.499059 7.4:-14778480 MS.gene72917:CDS
AAGGAATGGAGGAGGAAGAA+TGG 0.506045 7.4:+14780864 None:intergenic
TTGTAGGTGCTTGCTGATGA+AGG 0.509437 7.4:-14780534 MS.gene72917:intron
TCAGCATTGTCTGCTTTACA+AGG 0.510440 7.4:-14778506 MS.gene72917:CDS
CATTCCTTGGTGGAGATCCA+TGG 0.511576 7.4:-14780849 MS.gene72917:CDS
GGCGTTTGATGAAATTGATA+AGG 0.515289 7.4:-14780496 MS.gene72917:CDS
ATGCTGAACCTCTAATGATA+GGG 0.516366 7.4:+14778522 None:intergenic
AGGAATGGAGGAGGAAGAAT+GGG 0.516893 7.4:+14780865 None:intergenic
ATCCCCTGGAAACTTGTAGA+AGG 0.518821 7.4:+14778550 None:intergenic
ATTGAGAATACATCTTCAAT+GGG 0.521499 7.4:+14778380 None:intergenic
TGAGATGTTCAAGAAGATGT+TGG 0.521796 7.4:-14777657 MS.gene72917:CDS
GGAAGAATGGGTAGCGTCAT+CGG 0.522126 7.4:+14780877 None:intergenic
TCTTCAATGGGCATCAAGAA+AGG 0.524319 7.4:+14778392 None:intergenic
CTTGTTGTATCTGCACCTGA+TGG 0.528400 7.4:-14778964 MS.gene72917:CDS
ACTATTGGACACGTGGATCA+CGG 0.528486 7.4:-14780706 MS.gene72917:CDS
CTCCTGAAGAGAAGAAAAGA+GGG 0.530043 7.4:-14780473 MS.gene72917:CDS
AGAGAGGGTGGCAGAACAGT+TGG 0.536414 7.4:-14776861 MS.gene72917:CDS
ATATGTCCTCACAAAGGATG+AGG 0.538818 7.4:-14777265 MS.gene72917:CDS
TTCAAGAAGATGTTGGATCA+AGG 0.539587 7.4:-14777650 MS.gene72917:CDS
GAAGATGTTGGATCAAGGAC+AGG 0.545197 7.4:-14777645 MS.gene72917:intron
TCTACAAGCTCTAACAACTC+TGG 0.547509 7.4:+14778732 None:intergenic
CAGAACAGTTGGTGCAGGTG+TGG 0.550692 7.4:-14776850 MS.gene72917:CDS
GCTCCTGAAGAGAAGAAAAG+AGG 0.558794 7.4:-14780474 MS.gene72917:CDS
TTGAGGACTGCTGATGTCAC+CGG 0.560650 7.4:-14777195 MS.gene72917:CDS
CAAAGATTTGCCTTGAGAGA+GGG 0.560920 7.4:-14776876 MS.gene72917:CDS
GGTGGCAGAACAGTTGGTGC+AGG 0.561816 7.4:-14776855 MS.gene72917:CDS
TATGCTCATGTTGACTGCCC+TGG 0.562571 7.4:-14780205 MS.gene72917:CDS
GGACGAGGAACAGTTGCTAC+TGG 0.563419 7.4:-14778001 MS.gene72917:CDS
TGTTCTGCCACCCTCTCTCA+AGG 0.564153 7.4:+14776866 None:intergenic
AAGAGGGATTACAATTGCTA+CGG 0.564494 7.4:-14780457 MS.gene72917:intron
TGACCTTCTACAAGTTTCCA+GGG 0.568787 7.4:-14778553 MS.gene72917:CDS
GTGCCTGTTCCACTTGAACC+AGG 0.570193 7.4:-14777099 MS.gene72917:intron
CGTTCTGGTGAAAGTAGCCA+TGG 0.573938 7.4:+14780832 None:intergenic
GAGAGAAGTGTGGAATTGAG+AGG 0.576888 7.4:+14780931 None:intergenic
TCCTCACAAAGGATGAGGGT+GGG 0.587128 7.4:-14777260 MS.gene72917:CDS
TTGAGTATGAGACTGCGAAA+AGG 0.587605 7.4:-14780231 MS.gene72917:CDS
TTGTAGGCCGGTGATAATGT+TGG 0.587725 7.4:-14777551 MS.gene72917:intron
AATTGAGAGGAGAAGAGGAA+AGG 0.587918 7.4:+14780944 None:intergenic
TAACATAATCGGCATGTCCA+GGG 0.589750 7.4:+14780188 None:intergenic
CATGGATCTCCACCAAGGAA+TGG 0.590261 7.4:+14780850 None:intergenic
GTCAGGAATGTATTCATCAA+CGG 0.597205 7.4:+14778436 None:intergenic
GAAAAGGTCATTGCTAAACC+CGG 0.597744 7.4:-14777324 MS.gene72917:intron
ATATACCGACCTGGTTCAAG+TGG 0.599617 7.4:+14777090 None:intergenic
GCTACTGGTCGTGTTGAACA+AGG 0.600283 7.4:-14777986 MS.gene72917:CDS
TGTAGGTGCTTGCTGATGAA+GGG 0.600394 7.4:-14780533 MS.gene72917:intron
CGTCGGAACTATTGGACACG+TGG 0.600647 7.4:-14780713 MS.gene72917:CDS
TGTCTTCACGTTTCAGACCA+CGG 0.601798 7.4:+14777519 None:intergenic
AGATTTGCCTTGAGAGAGGG+TGG 0.603839 7.4:-14776873 MS.gene72917:CDS
TGCTTTACAAGGTACAAATG+AGG 0.604944 7.4:-14778495 MS.gene72917:CDS
ATGATAGGGATATCATCCCC+TGG 0.605677 7.4:+14778536 None:intergenic
GGTGATTGCAGCAGTTAGTG+TGG 0.612708 7.4:+14780678 None:intergenic
AAGAAGACCAACATTATCAC+CGG 0.614685 7.4:+14777544 None:intergenic
ACAGCAGTAACATTGTCTCC+AGG 0.616998 7.4:+14777135 None:intergenic
ACTGGAGCTGCCCAAATGGA+CGG 0.617245 7.4:-14778994 MS.gene72917:CDS
TCTCCACCAAGGAATGGAGG+AGG 0.620202 7.4:+14780856 None:intergenic
GGATCTCCACCAAGGAATGG+AGG 0.622567 7.4:+14780853 None:intergenic
GTCCTCACAAAGGATGAGGG+TGG 0.622920 7.4:-14777261 MS.gene72917:CDS
GCCCACCCTCATCCTTTGTG+AGG 0.631523 7.4:+14777259 None:intergenic
TATGTCCTCACAAAGGATGA+GGG 0.635467 7.4:-14777264 MS.gene72917:CDS
CATCAGGTGCAGATACAACA+AGG 0.636841 7.4:+14778965 None:intergenic
GACCTTCTACAAGTTTCCAG+GGG 0.639890 7.4:-14778552 MS.gene72917:CDS
TGGGTAGCGTCATCGGTGAG+AGG 0.643356 7.4:+14780884 None:intergenic
AATGTTGGTCTTCTTCTCCG+TGG 0.651935 7.4:-14777536 MS.gene72917:CDS
GTGAACGAGTGAGAGAAGTG+TGG 0.678699 7.4:+14780921 None:intergenic
ATAGTTCCGACGTTAACATG+AGG 0.685603 7.4:+14780724 None:intergenic
AGAGATATATGTCCTCACAA+AGG 0.697518 7.4:-14777271 MS.gene72917:CDS
GCAGTCCTCAAGTAAAACTG+AGG 0.704069 7.4:+14777207 None:intergenic
CTTGTAGAAATGGAGCTCCG+TGG 0.705529 7.4:-14778717 MS.gene72917:intron
TGAAGGGAAAGCAAAAGCTG+TGG 0.710762 7.4:-14780517 MS.gene72917:CDS
AGAAAGCCTCATGTTAACGT+CGG 0.718585 7.4:-14780730 MS.gene72917:CDS
GGAGCTGCCCAAATGGACGG+TGG 0.721733 7.4:-14778991 MS.gene72917:CDS
GTAGCCATGGATCTCCACCA+AGG 0.736526 7.4:+14780845 None:intergenic
AAACGTGAAGACATTCAGCG+TGG 0.768476 7.4:-14777509 MS.gene72917:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATTATTTTTTTTA+AGG - chr7.4:14779799-14779818 MS.gene72917:intron 0.0%
!!! TTTTTAATTATTTTTTTTAA+GGG - chr7.4:14779800-14779819 MS.gene72917:intron 0.0%
!! TAGAAATTAAATACATTTAT+TGG + chr7.4:14777689-14777708 None:intergenic 10.0%
!! TTTAATTATAAATAATCCTT+GGG + chr7.4:14777909-14777928 None:intergenic 10.0%
!!! AAGGTATTAAAAAAATAAAA+AGG - chr7.4:14778561-14778580 MS.gene72917:CDS 10.0%
!!! TTAAAAACTCATTAATTTTT+AGG + chr7.4:14778306-14778325 None:intergenic 10.0%
!! CAAGGATTATTTATAATTAA+AGG - chr7.4:14777908-14777927 MS.gene72917:intron 15.0%
!! CTTTAATTATAAATAATCCT+TGG + chr7.4:14777910-14777929 None:intergenic 15.0%
!! TAGTGTATATTAAACTAATA+TGG - chr7.4:14780237-14780256 MS.gene72917:CDS 15.0%
!! TATTAAAATTGAAAATGCAA+AGG - chr7.4:14778484-14778503 MS.gene72917:CDS 15.0%
!! TTAACATCAAAACAATAAAT+CGG + chr7.4:14777190-14777209 None:intergenic 15.0%
!!! AATTTTTAAGATTTATGAAG+CGG - chr7.4:14777870-14777889 MS.gene72917:intron 15.0%
!!! ACTTGTTATTTTATTTTACA+GGG - chr7.4:14780923-14780942 MS.gene72917:CDS 15.0%
!!! ATTAATGTTTTATTCTTGTT+TGG - chr7.4:14780025-14780044 MS.gene72917:intron 15.0%
!!! GATTTGATTAAGTTTTATTT+TGG - chr7.4:14777994-14778013 MS.gene72917:CDS 15.0%
!!! TAATTGATTGTTTAATTTTC+AGG - chr7.4:14777562-14777581 MS.gene72917:intron 15.0%
!!! TTATATATTTTATTTGCTGT+TGG - chr7.4:14779997-14780016 MS.gene72917:intron 15.0%
!!! TTTTATTAAAAAGGACAATA+AGG - chr7.4:14780786-14780805 MS.gene72917:intron 15.0%
!!! TTTTGATGTTAAAATATGAT+TGG - chr7.4:14777776-14777795 MS.gene72917:intron 15.0%
!!! TTTTTAATCATTAATTGACA+CGG - chr7.4:14779581-14779600 MS.gene72917:intron 15.0%
!! AAACCTTACTTTAACATAAT+CGG + chr7.4:14777648-14777667 None:intergenic 20.0%
!! AATTCTCAATATTGTCAATT+TGG - chr7.4:14778439-14778458 MS.gene72917:CDS 20.0%
!! ATTCTCAATATTGTCAATTT+GGG - chr7.4:14778440-14778459 MS.gene72917:CDS 20.0%
!! ATTGCAACATATGAAAAAAT+GGG + chr7.4:14780842-14780861 None:intergenic 20.0%
!! CTGTAAAATAAAATAACAAG+TGG + chr7.4:14780924-14780943 None:intergenic 20.0%
!! GGATTATTTATAATTAAAGG+TGG - chr7.4:14777911-14777930 MS.gene72917:intron 20.0%
!! TTATTTATAATTAAAGGTGG+TGG - chr7.4:14777914-14777933 MS.gene72917:intron 20.0%
!! TTCAAAATTTAACAATTACG+AGG + chr7.4:14779213-14779232 None:intergenic 20.0%
!!! AAAGGCCATTTTAAAATTAA+TGG - chr7.4:14779360-14779379 MS.gene72917:intron 20.0%
!!! AACAATAAATGCAAACTTTT+AGG - chr7.4:14778951-14778970 MS.gene72917:CDS 20.0%
!!! ATAACCATTTTAACATTTTC+TGG + chr7.4:14780666-14780685 None:intergenic 20.0%
!!! ATTGATTGATTTGATTTTGT+AGG - chr7.4:14777272-14777291 MS.gene72917:CDS 20.0%
!!! ATTTTTGTTAATCATCTATC+TGG - chr7.4:14779237-14779256 MS.gene72917:intron 20.0%
!!! CACTTGTTATTTTATTTTAC+AGG - chr7.4:14780922-14780941 MS.gene72917:CDS 20.0%
!!! TAAAATTTTTAAGTGAAGTG+AGG - chr7.4:14777211-14777230 MS.gene72917:CDS 20.0%
!!! TATATTTGTCTTCTTTTATG+AGG - chr7.4:14778685-14778704 MS.gene72917:intron 20.0%
!!! TGCATTTTCAATTTTAATAG+AGG + chr7.4:14778483-14778502 None:intergenic 20.0%
!!! TTTTAATACCTTACACATTA+TGG + chr7.4:14778553-14778572 None:intergenic 20.0%
!!! TTTTCAATTTTAATAGAGGA+TGG + chr7.4:14778479-14778498 None:intergenic 20.0%
! AATAAATTCAACCTATGATG+AGG + chr7.4:14780870-14780889 None:intergenic 25.0%
! AATTCTAACCATAATGTGTA+AGG - chr7.4:14778542-14778561 MS.gene72917:CDS 25.0%
! AATTGAGAATACATCTTCAA+TGG + chr7.4:14779446-14779465 None:intergenic 25.0%
! ATTGAGAATACATCTTCAAT+GGG + chr7.4:14779445-14779464 None:intergenic 25.0%
! CATTGCAACATATGAAAAAA+TGG + chr7.4:14780843-14780862 None:intergenic 25.0%
! GTTAAAGTAAGGTTTACATT+TGG - chr7.4:14777653-14777672 MS.gene72917:CDS 25.0%
! TAAGATAAAAAAAGAACCCA+TGG + chr7.4:14779480-14779499 None:intergenic 25.0%
! TATATATACACCGAACATTA+TGG - chr7.4:14778334-14778353 MS.gene72917:intron 25.0%
! TATTTGTACATGAATTGTAC+AGG - chr7.4:14779014-14779033 MS.gene72917:intron 25.0%
! TCGTATTTAATTCAATGAGT+TGG + chr7.4:14779518-14779537 None:intergenic 25.0%
! TTAATCAAATCTCTATGACA+TGG + chr7.4:14777985-14778004 None:intergenic 25.0%
! TTGCCATAAAAAAACAAACA+AGG + chr7.4:14777536-14777555 None:intergenic 25.0%
!! TATGGATTTTCACATTTTGT+AGG - chr7.4:14780255-14780274 MS.gene72917:intron 25.0%
!! TTTTTGCAGAATATGATTAC+TGG - chr7.4:14778810-14778829 MS.gene72917:intron 25.0%
!!! ATTATTTTTTTTAAGGGACG+AGG - chr7.4:14779806-14779825 MS.gene72917:intron 25.0%
!!! CATCCTTGTTTGTTTTTTTA+TGG - chr7.4:14777530-14777549 MS.gene72917:CDS 25.0%
!!! GGCATCCATTAATTTTAAAA+TGG + chr7.4:14779368-14779387 None:intergenic 25.0%
!!! TTAAGTTTTATTTTGGTCGT+CGG - chr7.4:14778001-14778020 MS.gene72917:CDS 25.0%
!!! TTTACTGTTTTTTGACCTAT+TGG - chr7.4:14777731-14777750 MS.gene72917:intron 25.0%
!!! TTTTATTCTTGTTTGGACAT+TGG - chr7.4:14780032-14780051 MS.gene72917:intron 25.0%
!!! TTTTTTGACCTATTGGAAAT+AGG - chr7.4:14777738-14777757 MS.gene72917:intron 25.0%
AAGTAGGTATTCTGTTGATA+TGG - chr7.4:14778922-14778941 MS.gene72917:CDS 30.0%
AATGTTAAAATGGTTATGCC+TGG - chr7.4:14780669-14780688 MS.gene72917:intron 30.0%
ACATTCTGGATATGAAATCA+AGG + chr7.4:14779762-14779781 None:intergenic 30.0%
AGCATCTATTCAATATCAGT+TGG - chr7.4:14779612-14779631 MS.gene72917:intron 30.0%
ATAAATTCCTTGCATTGCAA+TGG - chr7.4:14780080-14780099 MS.gene72917:intron 30.0%
ATATCAACAGAATACCTACT+TGG + chr7.4:14778923-14778942 None:intergenic 30.0%
ATATTGAATAGATGCTGCAT+TGG + chr7.4:14779608-14779627 None:intergenic 30.0%
CATTAAATTATATACCGACC+TGG + chr7.4:14780744-14780763 None:intergenic 30.0%
CATTGAATTAAATACGAGCT+CGG - chr7.4:14779521-14779540 MS.gene72917:intron 30.0%
GAACAAGGAATCATCAAAAT+TGG - chr7.4:14779851-14779870 MS.gene72917:intron 30.0%
GGAATGAGCTCAAATAATTT+AGG - chr7.4:14777935-14777954 MS.gene72917:intron 30.0%
GGTCGGTATATAATTTAATG+AGG - chr7.4:14780744-14780763 MS.gene72917:intron 30.0%
GTATTCTCAATTCAGGTAAA+AGG - chr7.4:14779454-14779473 MS.gene72917:intron 30.0%
GTTCATTCTTATCATGAAGA+GGG + chr7.4:14779168-14779187 None:intergenic 30.0%
GTTGCCAGAAAATGTTAAAA+TGG - chr7.4:14780659-14780678 MS.gene72917:intron 30.0%
TATAAACCTAGCACTGTAAA+GGG - chr7.4:14777461-14777480 MS.gene72917:intron 30.0%
TATTGAATAGATGCTGCATT+GGG + chr7.4:14779607-14779626 None:intergenic 30.0%
TCTCAATACCTATTTCCAAT+AGG + chr7.4:14777749-14777768 None:intergenic 30.0%
TGAAGATGTATTCTCAATTC+AGG - chr7.4:14779447-14779466 MS.gene72917:intron 30.0%
TGGAAATAAAATGAGCATAG+CGG - chr7.4:14778092-14778111 MS.gene72917:intron 30.0%
TTATAAACCTAGCACTGTAA+AGG - chr7.4:14777460-14777479 MS.gene72917:intron 30.0%
! AAAACTAAGTTTTTCCTGGT+AGG - chr7.4:14780111-14780130 MS.gene72917:intron 30.0%
! AAACTAAGTTTTTCCTGGTA+GGG - chr7.4:14780112-14780131 MS.gene72917:intron 30.0%
! ATGCCGATTATGTTAAAGTA+AGG - chr7.4:14777642-14777661 MS.gene72917:intron 30.0%
! ATGTTGATTGAGTCATTTAC+TGG - chr7.4:14779907-14779926 MS.gene72917:intron 30.0%
! GACAAAAAGTTTTACACTGT+CGG - chr7.4:14777505-14777524 MS.gene72917:CDS 30.0%
! TCCTAAAACTAAGTTTTTCC+TGG - chr7.4:14780107-14780126 MS.gene72917:intron 30.0%
! TTTAAAAAGCACACAAGAGA+TGG + chr7.4:14779048-14779067 None:intergenic 30.0%
!! ACCAGGAAAAACTTAGTTTT+AGG + chr7.4:14780111-14780130 None:intergenic 30.0%
!! ATTTGGTGTTGGGTTAATTA+GGG - chr7.4:14777234-14777253 MS.gene72917:CDS 30.0%
!! TTACAGTACATGTTAGTCTT+GGG - chr7.4:14779555-14779574 MS.gene72917:intron 30.0%
!! TTTTAAGTGAAGTGAGGATT+TGG - chr7.4:14777217-14777236 MS.gene72917:CDS 30.0%
!!! TGCGTTTTGAGATTAATTTG+TGG - chr7.4:14777430-14777449 MS.gene72917:intron 30.0%
AAACACCCGATAAGACATTA+AGG + chr7.4:14778664-14778683 None:intergenic 35.0%
AAATGAGGAGATTGGAAGAA+AGG - chr7.4:14779342-14779361 MS.gene72917:intron 35.0%
AAGAAGACCAACATTATCAC+CGG + chr7.4:14780281-14780300 None:intergenic 35.0%
AAGAGGGATTACAATTGCTA+CGG - chr7.4:14777365-14777384 MS.gene72917:intron 35.0%
AAGGAGAGTAGATAAGATGA+AGG - chr7.4:14778243-14778262 MS.gene72917:intron 35.0%
AATGCTGAACCTCTAATGAT+AGG + chr7.4:14779304-14779323 None:intergenic 35.0%
AGACTTGACAAGATAGGATT+AGG - chr7.4:14778145-14778164 MS.gene72917:intron 35.0%
AGAGACAACAATGTTTGTCA+AGG + chr7.4:14779646-14779665 None:intergenic 35.0%
AGAGATATATGTCCTCACAA+AGG - chr7.4:14780551-14780570 MS.gene72917:intron 35.0%
AGCATGCCTTAATGTCTTAT+CGG - chr7.4:14778655-14778674 MS.gene72917:intron 35.0%
AGGAGAGTAGATAAGATGAA+GGG - chr7.4:14778244-14778263 MS.gene72917:intron 35.0%
ATAAACCTAGCACTGTAAAG+GGG - chr7.4:14777462-14777481 MS.gene72917:intron 35.0%
ATGCTGAACCTCTAATGATA+GGG + chr7.4:14779303-14779322 None:intergenic 35.0%
CAATAAGTATGATGGCTACA+TGG + chr7.4:14778371-14778390 None:intergenic 35.0%
CCATCATACTTATTGTTGGT+GGG - chr7.4:14778376-14778395 MS.gene72917:CDS 35.0%
CTTATCATGAAGAGGGAAAA+GGG + chr7.4:14779161-14779180 None:intergenic 35.0%
CTTTCAGTATATTAAGCACG+AGG + chr7.4:14779963-14779982 None:intergenic 35.0%
GAGAAATCGAATACTTACTC+TGG + chr7.4:14777168-14777187 None:intergenic 35.0%
GATGATATCCCTATCATTAG+AGG - chr7.4:14779292-14779311 MS.gene72917:intron 35.0%
GGCGTTTGATGAAATTGATA+AGG - chr7.4:14777326-14777345 MS.gene72917:intron 35.0%
GGTTCATTCTTATCATGAAG+AGG + chr7.4:14779169-14779188 None:intergenic 35.0%
GTAGCCATCATACTTATTGT+TGG - chr7.4:14778372-14778391 MS.gene72917:intron 35.0%
GTAGTAAGACTTGACAAGAT+AGG - chr7.4:14778139-14778158 MS.gene72917:intron 35.0%
GTCAGGAATGTATTCATCAA+CGG + chr7.4:14779389-14779408 None:intergenic 35.0%
GTTGTTAGAGCTTGTAGAAA+TGG - chr7.4:14779095-14779114 MS.gene72917:intron 35.0%
TAAAAGGAGAGGATTGTGTT+AGG + chr7.4:14778030-14778049 None:intergenic 35.0%
TATCTACTCTCCTTACTCTA+CGG + chr7.4:14778237-14778256 None:intergenic 35.0%
TATCTCTGCTTCAAATCTCT+TGG + chr7.4:14780538-14780557 None:intergenic 35.0%
TCTTATCATGAAGAGGGAAA+AGG + chr7.4:14779162-14779181 None:intergenic 35.0%
TGAGATGTTCAAGAAGATGT+TGG - chr7.4:14780165-14780184 MS.gene72917:intron 35.0%
TGCAACAGTAACTAACAAAG+AGG + chr7.4:14780367-14780386 None:intergenic 35.0%
TGCAATGTTATCCTCATCAT+AGG - chr7.4:14780856-14780875 MS.gene72917:CDS 35.0%
TGCTTTACAAGGTACAAATG+AGG - chr7.4:14779327-14779346 MS.gene72917:intron 35.0%
TGTACATGAATTGTACAGGT+TGG - chr7.4:14779018-14779037 MS.gene72917:intron 35.0%
TTAGAGAGAGAATTACGTTC+TGG + chr7.4:14777008-14777027 None:intergenic 35.0%
TTCAAGAAGATGTTGGATCA+AGG - chr7.4:14780172-14780191 MS.gene72917:intron 35.0%
TTGGGTTAATTAGGGTTTAG+AGG - chr7.4:14777242-14777261 MS.gene72917:CDS 35.0%
! ATAGACCTCAGTTTTACTTG+AGG - chr7.4:14780610-14780629 MS.gene72917:intron 35.0%
! ATTAGCTTAATGACGCAAGA+TGG - chr7.4:14777844-14777863 MS.gene72917:intron 35.0%
! ATTGTTGGTGGGATAAGAAT+CGG - chr7.4:14778387-14778406 MS.gene72917:CDS 35.0%
! CTTACAGTACATGTTAGTCT+TGG - chr7.4:14779554-14779573 MS.gene72917:intron 35.0%
! GATTTTCACATTTTGTAGGC+CGG - chr7.4:14780259-14780278 MS.gene72917:intron 35.0%
! TCCTCATCAAATAGTGTTGA+TGG + chr7.4:14778736-14778755 None:intergenic 35.0%
!! AGAATGTGCTCTTTAGTTTG+AGG + chr7.4:14778891-14778910 None:intergenic 35.0%
!! CAAAATTGGTGATGAAGTTG+AGG - chr7.4:14779865-14779884 MS.gene72917:intron 35.0%
!! CGGTTGAATATTTTTACCCA+AGG - chr7.4:14777890-14777909 MS.gene72917:intron 35.0%
!! GATTTGGTGTTGGGTTAATT+AGG - chr7.4:14777233-14777252 MS.gene72917:CDS 35.0%
!! TACAGTACATGTTAGTCTTG+GGG - chr7.4:14779556-14779575 MS.gene72917:intron 35.0%
!!! GACGTTGTCTTGTTTTGAAA+AGG - chr7.4:14780482-14780501 MS.gene72917:CDS 35.0%
AATTGAGAGGAGAAGAGGAA+AGG + chr7.4:14776881-14776900 None:intergenic 40.0%
ACAAGACAACGTCAGTAAAG+TGG + chr7.4:14780475-14780494 None:intergenic 40.0%
ACAATTACGAGGACTACTAC+AGG + chr7.4:14779202-14779221 None:intergenic 40.0%
ACTACTACAGGAAGTTACGA+AGG + chr7.4:14779190-14779209 None:intergenic 40.0%
ACTTATCGTAGAAAAGCTGG+TGG - chr7.4:14778172-14778191 MS.gene72917:intron 40.0%
AGAAAGCCTCATGTTAACGT+CGG - chr7.4:14777092-14777111 MS.gene72917:intron 40.0%
ATAGTTCCGACGTTAACATG+AGG + chr7.4:14777101-14777120 None:intergenic 40.0%
ATATGTCCTCACAAAGGATG+AGG - chr7.4:14780557-14780576 MS.gene72917:intron 40.0%
ATCTACTCTCCTTACTCTAC+GGG + chr7.4:14778236-14778255 None:intergenic 40.0%
ATGCACTTTATGCTAGTGTG+TGG - chr7.4:14780890-14780909 MS.gene72917:CDS 40.0%
CAAAGATTTGCCTTGAGAGA+GGG - chr7.4:14780946-14780965 MS.gene72917:CDS 40.0%
CAAGGTACAAATGAGGAGAT+TGG - chr7.4:14779334-14779353 MS.gene72917:intron 40.0%
CAATTCAGGTAAAAGGCCAT+GGG - chr7.4:14779461-14779480 MS.gene72917:intron 40.0%
CATGTTAACGTCGGAACTAT+TGG - chr7.4:14777101-14777120 MS.gene72917:CDS 40.0%
CCCACCAACAATAAGTATGA+TGG + chr7.4:14778379-14778398 None:intergenic 40.0%
CCTTAGAAGCAAGGAAGTAA+CGG + chr7.4:14778981-14779000 None:intergenic 40.0%
CTCCTGAAGAGAAGAAAAGA+GGG - chr7.4:14777349-14777368 MS.gene72917:intron 40.0%
GAAAAGGTCATTGCTAAACC+CGG - chr7.4:14780498-14780517 MS.gene72917:CDS 40.0%
GAATGTTGACCTTAGAAGCA+AGG + chr7.4:14778990-14779009 None:intergenic 40.0%
GAGAAAATACCCGTAGAGTA+AGG - chr7.4:14778224-14778243 MS.gene72917:intron 40.0%
GAGGAATGACGAGAATTCAA+GGG + chr7.4:14779944-14779963 None:intergenic 40.0%
GCATGCCTTAATGTCTTATC+GGG - chr7.4:14778656-14778675 MS.gene72917:intron 40.0%
GCCATCAACACTATTTGATG+AGG - chr7.4:14778732-14778751 MS.gene72917:CDS 40.0%
GCCATCATACTTATTGTTGG+TGG - chr7.4:14778375-14778394 MS.gene72917:intron 40.0%
GGATTACAATTGCTACGGTT+CGG - chr7.4:14777370-14777389 MS.gene72917:intron 40.0%
GGGGCGGTAAAAAACTAATA+TGG - chr7.4:14778072-14778091 MS.gene72917:intron 40.0%
GTGAGAGGTGATTGAGAAAT+CGG + chr7.4:14776926-14776945 None:intergenic 40.0%
TAAACCTAGCACTGTAAAGG+GGG - chr7.4:14777463-14777482 MS.gene72917:intron 40.0%
TAACATAATCGGCATGTCCA+GGG + chr7.4:14777637-14777656 None:intergenic 40.0%
TATGTCCTCACAAAGGATGA+GGG - chr7.4:14780558-14780577 MS.gene72917:intron 40.0%
TCAAACGACGCCATAATGTT+CGG + chr7.4:14778347-14778366 None:intergenic 40.0%
TCAATTCAGGTAAAAGGCCA+TGG - chr7.4:14779460-14779479 MS.gene72917:intron 40.0%
TCAGCATTGTCTGCTTTACA+AGG - chr7.4:14779316-14779335 MS.gene72917:intron 40.0%
TCGACTTATCGTAGAAAAGC+TGG - chr7.4:14778169-14778188 MS.gene72917:intron 40.0%
TCTTAGAGAAAAACCCACCA+CGG + chr7.4:14779125-14779144 None:intergenic 40.0%
TCTTCAATGGGCATCAAGAA+AGG + chr7.4:14779433-14779452 None:intergenic 40.0%
TGACCTTCTACAAGTTTCCA+GGG - chr7.4:14779269-14779288 MS.gene72917:intron 40.0%
TTAACATAATCGGCATGTCC+AGG + chr7.4:14777638-14777657 None:intergenic 40.0%
TTGACCTTCTACAAGTTTCC+AGG - chr7.4:14779268-14779287 MS.gene72917:intron 40.0%
TTGAGTATGAGACTGCGAAA+AGG - chr7.4:14777591-14777610 MS.gene72917:intron 40.0%
TTTGATGAGGAATGCTTCTG+CGG - chr7.4:14778745-14778764 MS.gene72917:CDS 40.0%
! ATCCCTCTTTTCTTCTCTTC+AGG + chr7.4:14777354-14777373 None:intergenic 40.0%
! CCTCTGAAAACAACAGTTAC+TGG - chr7.4:14780139-14780158 MS.gene72917:intron 40.0%
! GGTGATGAAGTTGAGGTTTT+GGG - chr7.4:14779872-14779891 MS.gene72917:intron 40.0%
! TCTACAAGCTCTAACAACTC+TGG + chr7.4:14779093-14779112 None:intergenic 40.0%
! TTTGCTGTGTCTCAGATAAC+AGG - chr7.4:14778606-14778625 MS.gene72917:intron 40.0%
!! TCAAGAAAGGCTTTTCAAGC+TGG + chr7.4:14779420-14779439 None:intergenic 40.0%
!! TGAAGTGAGGATTTGGTGTT+GGG - chr7.4:14777224-14777243 MS.gene72917:CDS 40.0%
!! TGCTCTTTAGTTTGAGGCAT+TGG + chr7.4:14778885-14778904 None:intergenic 40.0%
!! TGGTGATGAAGTTGAGGTTT+TGG - chr7.4:14779871-14779890 MS.gene72917:intron 40.0%
!! TTCTGGCAACTCTACTTTTC+CGG + chr7.4:14780649-14780668 None:intergenic 40.0%
!!! ATTAGTTTTTTACCGCCCCA+AGG + chr7.4:14778071-14778090 None:intergenic 40.0%
!!! CCAGTAACTGTTGTTTTCAG+AGG + chr7.4:14780142-14780161 None:intergenic 40.0%
AAACGTGAAGACATTCAGCG+TGG - chr7.4:14780313-14780332 MS.gene72917:intron 45.0%
AAACTCAGCTTAGGTGGTCT+GGG - chr7.4:14778195-14778214 MS.gene72917:intron 45.0%
AAGCAGCAGACATGACATTC+TGG + chr7.4:14779776-14779795 None:intergenic 45.0%
AAGGAATGGAGGAGGAAGAA+TGG + chr7.4:14776961-14776980 None:intergenic 45.0%
AAGGATACCACCGTCCATTT+GGG + chr7.4:14778841-14778860 None:intergenic 45.0%
ACAGCAGTAACATTGTCTCC+AGG + chr7.4:14780690-14780709 None:intergenic 45.0%
ACTATTGGACACGTGGATCA+CGG - chr7.4:14777116-14777135 MS.gene72917:CDS 45.0%
AGGAATGGAGGAGGAAGAAT+GGG + chr7.4:14776960-14776979 None:intergenic 45.0%
ATATACCGACCTGGTTCAAG+TGG + chr7.4:14780735-14780754 None:intergenic 45.0%
ATCATGAAGAGGGAAAAGGG+TGG + chr7.4:14779158-14779177 None:intergenic 45.0%
ATCCCCTGGAAACTTGTAGA+AGG + chr7.4:14779275-14779294 None:intergenic 45.0%
ATGATAGGGATATCATCCCC+TGG + chr7.4:14779289-14779308 None:intergenic 45.0%
ATTCTTCCTCCTCCATTCCT+TGG - chr7.4:14776960-14776979 MS.gene72917:intron 45.0%
CACTGTAAAGGGGGTTTGAT+TGG - chr7.4:14777472-14777491 MS.gene72917:intron 45.0%
CATCAGGTGCAGATACAACA+AGG + chr7.4:14778860-14778879 None:intergenic 45.0%
CCGTTACTTCCTTGCTTCTA+AGG - chr7.4:14778978-14778997 MS.gene72917:CDS 45.0%
CGAGGAATGACGAGAATTCA+AGG + chr7.4:14779945-14779964 None:intergenic 45.0%
GAAGATGTTGGATCAAGGAC+AGG - chr7.4:14780177-14780196 MS.gene72917:intron 45.0%
GACCTTCTACAAGTTTCCAG+GGG - chr7.4:14779270-14779289 MS.gene72917:intron 45.0%
GCAAAGATTTGCCTTGAGAG+AGG - chr7.4:14780945-14780964 MS.gene72917:CDS 45.0%
GCAGTCCTCAAGTAAAACTG+AGG + chr7.4:14780618-14780637 None:intergenic 45.0%
GCTCCTGAAGAGAAGAAAAG+AGG - chr7.4:14777348-14777367 MS.gene72917:intron 45.0%
GGAAACACCATTGCAATGCA+AGG + chr7.4:14780090-14780109 None:intergenic 45.0%
TCATGAAGAGGGAAAAGGGT+GGG + chr7.4:14779157-14779176 None:intergenic 45.0%
TGAAGGGAAAGCAAAAGCTG+TGG - chr7.4:14777305-14777324 MS.gene72917:CDS 45.0%
TGTCTTCACGTTTCAGACCA+CGG + chr7.4:14780306-14780325 None:intergenic 45.0%
TGTGGAATTGAGAGGAGAAG+AGG + chr7.4:14776886-14776905 None:intergenic 45.0%
! CTAAGTTTTTCCTGGTAGGG+TGG - chr7.4:14780115-14780134 MS.gene72917:intron 45.0%
! CTCTCCTTTTATCCTCGCTT+GGG - chr7.4:14778039-14778058 MS.gene72917:intron 45.0%
! CTTGGATGCTTTTGTAGCAC+CGG + chr7.4:14780520-14780539 None:intergenic 45.0%
! CTTGTTGTATCTGCACCTGA+TGG - chr7.4:14778858-14778877 MS.gene72917:intron 45.0%
! GAGAGAAGTGTGGAATTGAG+AGG + chr7.4:14776894-14776913 None:intergenic 45.0%
! TGTAGGTGCTTGCTGATGAA+GGG - chr7.4:14777289-14777308 MS.gene72917:CDS 45.0%
! TTGGATGCTTTTGTAGCACC+GGG + chr7.4:14780519-14780538 None:intergenic 45.0%
! TTGTAGGCCGGTGATAATGT+TGG - chr7.4:14780271-14780290 MS.gene72917:intron 45.0%
! TTGTAGGTGCTTGCTGATGA+AGG - chr7.4:14777288-14777307 MS.gene72917:CDS 45.0%
!! AATGTTGGTCTTCTTCTCCG+TGG - chr7.4:14780286-14780305 MS.gene72917:intron 45.0%
!! ATTCTTCTAGCTCGCCAAGT+AGG - chr7.4:14778906-14778925 MS.gene72917:intron 45.0%
!! GTGAAGTGAGGATTTGGTGT+TGG - chr7.4:14777223-14777242 MS.gene72917:CDS 45.0%
!!! TGAGGTTTTGGGTATGACAC+AGG - chr7.4:14779883-14779902 MS.gene72917:intron 45.0%
!!! TTTTTTTTCTTTTATTAAAA+AGG - chr7.4:14780777-14780796 MS.gene72917:intron 5.0%
AGATTTGCCTTGAGAGAGGG+TGG - chr7.4:14780949-14780968 MS.gene72917:CDS 50.0%
AGCTGGTGGAAACTCAGCTT+AGG - chr7.4:14778186-14778205 MS.gene72917:intron 50.0%
CAAACCCCCTTTACAGTGCT+AGG + chr7.4:14777470-14777489 None:intergenic 50.0%
CAAGGATACCACCGTCCATT+TGG + chr7.4:14778842-14778861 None:intergenic 50.0%
CATGGATCTCCACCAAGGAA+TGG + chr7.4:14776975-14776994 None:intergenic 50.0%
CATTCCTTGGTGGAGATCCA+TGG - chr7.4:14776973-14776992 MS.gene72917:intron 50.0%
CCAAGCGAGGATAAAAGGAG+AGG + chr7.4:14778041-14778060 None:intergenic 50.0%
CGTTCTGGTGAAAGTAGCCA+TGG + chr7.4:14776993-14777012 None:intergenic 50.0%
CTGTTCCACTTGAACCAGGT+CGG - chr7.4:14780727-14780746 MS.gene72917:CDS 50.0%
CTTGTAGAAATGGAGCTCCG+TGG - chr7.4:14779105-14779124 MS.gene72917:intron 50.0%
GAAACTCAGCTTAGGTGGTC+TGG - chr7.4:14778194-14778213 MS.gene72917:intron 50.0%
GATTACTGGAGCTGCCCAAA+TGG - chr7.4:14778824-14778843 MS.gene72917:intron 50.0%
GCTACTGGTCGTGTTGAACA+AGG - chr7.4:14779836-14779855 MS.gene72917:intron 50.0%
GGAAGAATGGGTAGCGTCAT+CGG + chr7.4:14776948-14776967 None:intergenic 50.0%
GGTGATTGCAGCAGTTAGTG+TGG + chr7.4:14777147-14777166 None:intergenic 50.0%
GTGAACGAGTGAGAGAAGTG+TGG + chr7.4:14776904-14776923 None:intergenic 50.0%
TAGAAATGGAGCTCCGTGGT+GGG - chr7.4:14779109-14779128 MS.gene72917:intron 50.0%
TCCTCACAAAGGATGAGGGT+GGG - chr7.4:14780562-14780581 MS.gene72917:intron 50.0%
TGAAGACATTCAGCGTGGTC+AGG - chr7.4:14780318-14780337 MS.gene72917:intron 50.0%
TGGTGGAAACTCAGCTTAGG+TGG - chr7.4:14778189-14778208 MS.gene72917:intron 50.0%
TTGAGGACTGCTGATGTCAC+CGG - chr7.4:14780627-14780646 MS.gene72917:intron 50.0%
! CCTCTCCTTTTATCCTCGCT+TGG - chr7.4:14778038-14778057 MS.gene72917:intron 50.0%
! CCTTTTATCCTCGCTTGGGA+CGG - chr7.4:14778043-14778062 MS.gene72917:intron 50.0%
! TATGCTCATGTTGACTGCCC+TGG - chr7.4:14777617-14777636 MS.gene72917:intron 50.0%
!! GCTTTTCAAGCTGGCGAACA+GGG + chr7.4:14779411-14779430 None:intergenic 50.0%
!! GTTTGAGGCATTGGTCCATC+AGG + chr7.4:14778876-14778895 None:intergenic 50.0%
ACTGGAGCTGCCCAAATGGA+CGG - chr7.4:14778828-14778847 MS.gene72917:intron 55.0%
AGAGAGGGTGGCAGAACAGT+TGG - chr7.4:14780961-14780980 MS.gene72917:CDS 55.0%
CCGTCCCAAGCGAGGATAAA+AGG + chr7.4:14778046-14778065 None:intergenic 55.0%
CGACCTGGTTCAAGTGGAAC+AGG + chr7.4:14780729-14780748 None:intergenic 55.0%
CGTCGGAACTATTGGACACG+TGG - chr7.4:14777109-14777128 MS.gene72917:CDS 55.0%
CTTCCTCCTCCATTCCTTGG+TGG - chr7.4:14776963-14776982 MS.gene72917:intron 55.0%
GAAGAGGGAAAAGGGTGGGA+AGG + chr7.4:14779153-14779172 None:intergenic 55.0%
GGACGAGGAACAGTTGCTAC+TGG - chr7.4:14779821-14779840 MS.gene72917:intron 55.0%
GGATCTCCACCAAGGAATGG+AGG + chr7.4:14776972-14776991 None:intergenic 55.0%
GTAGAAATGGAGCTCCGTGG+TGG - chr7.4:14779108-14779127 MS.gene72917:intron 55.0%
GTAGCCATGGATCTCCACCA+AGG + chr7.4:14776980-14776999 None:intergenic 55.0%
GTCCTCACAAAGGATGAGGG+TGG - chr7.4:14780561-14780580 MS.gene72917:intron 55.0%
GTGCCTGTTCCACTTGAACC+AGG - chr7.4:14780723-14780742 MS.gene72917:CDS 55.0%
TCTCCACCAAGGAATGGAGG+AGG + chr7.4:14776969-14776988 None:intergenic 55.0%
TGTTCTGCCACCCTCTCTCA+AGG + chr7.4:14780959-14780978 None:intergenic 55.0%
TTTCAGAGGACCACCCTACC+AGG + chr7.4:14780128-14780147 None:intergenic 55.0%
! CAGAACAGTTGGTGCAGGTG+TGG - chr7.4:14780972-14780991 MS.gene72917:CDS 55.0%
!! GGCTTTTCAAGCTGGCGAAC+AGG + chr7.4:14779412-14779431 None:intergenic 55.0%
GCCCACCCTCATCCTTTGTG+AGG + chr7.4:14780566-14780585 None:intergenic 60.0%
GCTTAGGTGGTCTGGGCTTG+TGG - chr7.4:14778202-14778221 MS.gene72917:intron 60.0%
TCAAGCTGGCGAACAGGGTC+AGG + chr7.4:14779406-14779425 None:intergenic 60.0%
TGGGTAGCGTCATCGGTGAG+AGG + chr7.4:14776941-14776960 None:intergenic 60.0%
! GGTGGCAGAACAGTTGGTGC+AGG - chr7.4:14780967-14780986 MS.gene72917:CDS 60.0%
CTCGCTTGGGACGGAGCCTT+GGG - chr7.4:14778052-14778071 MS.gene72917:intron 65.0%
GGAGCTGCCCAAATGGACGG+TGG - chr7.4:14778831-14778850 MS.gene72917:intron 65.0%
TCGCTTGGGACGGAGCCTTG+GGG - chr7.4:14778053-14778072 MS.gene72917:intron 65.0%
CCAAGGCTCCGTCCCAAGCG+AGG + chr7.4:14778054-14778073 None:intergenic 70.0%
CCTCGCTTGGGACGGAGCCT+TGG - chr7.4:14778051-14778070 MS.gene72917:intron 70.0%
CTTGGGACGGAGCCTTGGGG+CGG - chr7.4:14778056-14778075 MS.gene72917:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 14776830 14781014 14776830 ID=MS.gene72917
chr7.4 mRNA 14776830 14781014 14776830 ID=MS.gene72917.t1;Parent=MS.gene72917
chr7.4 exon 14780833 14781014 14780833 ID=MS.gene72917.t1.exon1;Parent=MS.gene72917.t1
chr7.4 CDS 14780833 14781014 14780833 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14780675 14780750 14780675 ID=MS.gene72917.t1.exon2;Parent=MS.gene72917.t1
chr7.4 CDS 14780675 14780750 14780675 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14780458 14780550 14780458 ID=MS.gene72917.t1.exon3;Parent=MS.gene72917.t1
chr7.4 CDS 14780458 14780550 14780458 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14780186 14780260 14780186 ID=MS.gene72917.t1.exon4;Parent=MS.gene72917.t1
chr7.4 CDS 14780186 14780260 14780186 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14778921 14779025 14778921 ID=MS.gene72917.t1.exon5;Parent=MS.gene72917.t1
chr7.4 CDS 14778921 14779025 14778921 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14778718 14778808 14778718 ID=MS.gene72917.t1.exon6;Parent=MS.gene72917.t1
chr7.4 CDS 14778718 14778808 14778718 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14778376 14778581 14778376 ID=MS.gene72917.t1.exon7;Parent=MS.gene72917.t1
chr7.4 CDS 14778376 14778581 14778376 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14777940 14778023 14777940 ID=MS.gene72917.t1.exon8;Parent=MS.gene72917.t1
chr7.4 CDS 14777940 14778023 14777940 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14777646 14777711 14777646 ID=MS.gene72917.t1.exon9;Parent=MS.gene72917.t1
chr7.4 CDS 14777646 14777711 14777646 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14777505 14777567 14777505 ID=MS.gene72917.t1.exon10;Parent=MS.gene72917.t1
chr7.4 CDS 14777505 14777567 14777505 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14777100 14777340 14777100 ID=MS.gene72917.t1.exon11;Parent=MS.gene72917.t1
chr7.4 CDS 14777100 14777340 14777100 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
chr7.4 exon 14776830 14776900 14776830 ID=MS.gene72917.t1.exon12;Parent=MS.gene72917.t1
chr7.4 CDS 14776830 14776900 14776830 ID=cds.MS.gene72917.t1;Parent=MS.gene72917.t1
Gene Sequence

>MS.gene72917

ATGGCTACTTCACTCGCTCTCAGAAACTCTTCTTCTAAACGTCTTTCACCTTTCCTCTTCTCCTCTCAATTCCACACTTCTCTCACTCGTTCACCGATTTCTCAATCACCTCTCACCGATGACGCTACCCATTCTTCCTCCTCCATTCCTTGGTGGAGATCCATGGCTACTTTCACCAGAACGTAATTCTCTCTCTAACACTTTCTCTCTATTCAATTTTTCGAAATCTGAACTATTGAATTTGTTATTGTTTTTTGTTTGCAGAAAGCCTCATGTTAACGTCGGAACTATTGGACACGTGGATCACGGAAAAACCACACTAACTGCTGCAATCACCAGAGTAAGTATTCGATTTCTCCGATTTATTGTTTTGATGTTAATTAAAATTTTTAAGTGAAGTGAGGATTTGGTGTTGGGTTAATTAGGGTTTAGAGGTGACGAAATTGATTGATTTGATTTTGTAGGTGCTTGCTGATGAAGGGAAAGCAAAAGCTGTGGCGTTTGATGAAATTGATAAGGCTCCTGAAGAGAAGAAAAGAGGGATTACAATTGCTACGGTTCGGATTTTGTTTTTTGTTGCATTTTGTTTGTTTTGTGTTTTGCGTTTTGAGATTAATTTGTGGAACTCTCTTATAAACCTAGCACTGTAAAGGGGGTTTGATTGGATATATGTGTGACAAAAAGTTTTACACTGTCGGTGCATCCTTGTTTGTTTTTTTATGGCAATGTAACTAATTGATTGTTTAATTTTCAGGCACATGTTGAGTATGAGACTGCGAAAAGGCATTATGCTCATGTTGACTGCCCTGGACATGCCGATTATGTTAAAGTAAGGTTTACATTTGGAAAAATATCTCCAATAAATGTATTTAATTTCTATACAGTGACTTTATATATATGTTTTACTGTTTTTTGACCTATTGGAAATAGGTATTGAGAAGTGATGTTTTGATGTTAAAATATGATTGGATATTGTGCTTTACACTATCTGTTTTTATATATACTTGCTAATTAATTAGCTTAATGACGCAAGATGGCTAAATTTTTAAGATTTATGAAGCGGTTGAATATTTTTACCCAAGGATTATTTATAATTAAAGGTGGTGGAATGAGCTCAAATAATTTAGGCTTTAATACAATTATGTATTTGATCCATGTCATAGAGATTTGATTAAGTTTTATTTTGGTCGTCGGCTTCCTAACACAATCCTCTCCTTTTATCCTCGCTTGGGACGGAGCCTTGGGGCGGTAAAAAACTAATATGGAAATAAAATGAGCATAGCGGATATGAGAATGTTGCATTGAATATGTAGTAAGACTTGACAAGATAGGATTAGGATCGACTTATCGTAGAAAAGCTGGTGGAAACTCAGCTTAGGTGGTCTGGGCTTGTGGAGAAAATACCCGTAGAGTAAGGAGAGTAGATAAGATGAAGGGATGTTGAAAATCTATAAGAGAAATTATTAAGAAAGACCTAAAAATTAATGAGTTTTTAATATATATATATATATACACCGAACATTATGGCGTCGTTTGATCCATGTAGCCATCATACTTATTGTTGGTGGGATAAGAATCGGTTGTTCGTTGTTGTTGTATGTTTTAACAGAATTCTCAATATTGTCAATTTGGGTGTTTGTGTAACTCCATCCTCTATTAAAATTGAAAATGCAAAGGAGAATTCAGATTAGTATGTATCTATTTCTAATTCTAATTCTAACCATAATGTGTAAGGTATTAAAAAAATAAAAAGGTCACTTAAAAGTTTGTCATCGTTTTGCTGTGTCTCAGATAACAGGTTTGTGTTGCGCAGCTTAAGTATTACAGCATGCCTTAATGTCTTATCGGGTGTTTCTATATTTGTCTTCTTTTATGAGGAAGTTTGTCATCGCTTTTTTTTCAGCCATCAACACTATTTGATGAGGAATGCTTCTGCGGTTTTGCGTTTGTTCTGTTATGCATTTATTAAATAATTGTTTGTTTTTGCAGAATATGATTACTGGAGCTGCCCAAATGGACGGTGGTATCCTTGTTGTATCTGCACCTGATGGACCAATGCCTCAAACTAAAGAGCACATTCTTCTAGCTCGCCAAGTAGGTATTCTGTTGATATGGTTTGTAAACAATAAATGCAAACTTTTAGGTCTACCGTTACTTCCTTGCTTCTAAGGTCAACATTCATTTTATTTGTACATGAATTGTACAGGTTGGTGTGCCATCTCTTGTGTGCTTTTTAAATAAAGTTGATGCTGTAGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTCCGTGGTGGGTTTTTCTCTAAGATTTCACCTTCCCACCCTTTTCCCTCTTCATGATAAGAATGAACCTTCGTAACTTCCTGTAGTAGTCCTCGTAATTGTTAAATTTTGAAGTTGATTTTTGTTAATCATCTATCTGGCAGAGCTTTTGACCTTCTACAAGTTTCCAGGGGATGATATCCCTATCATTAGAGGTTCAGCATTGTCTGCTTTACAAGGTACAAATGAGGAGATTGGAAGAAAGGCCATTTTAAAATTAATGGATGCCGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGAAAAGCCTTTCTTGATGCCCATTGAAGATGTATTCTCAATTCAGGTAAAAGGCCATGGGTTCTTTTTTTATCTTAAATTTTTGAAGAATGCCAACTCATTGAATTAAATACGAGCTCGGTTATTGTATTCTTACAGTACATGTTAGTCTTGGGGTATTTTTAATCATTAATTGACACGGCCCAATGCAGCATCTATTCAATATCAGTTGGATGCGATACCTTGACAAACATTGTTGTCTCTTTTGTTCAATTTTTTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAATATCAAAGTATCACAATCTACCTTGATTTCATATCCAGAATGTCATGTCTGCTGCTTTACATTTTTAATTATTTTTTTTAAGGGACGAGGAACAGTTGCTACTGGTCGTGTTGAACAAGGAATCATCAAAATTGGTGATGAAGTTGAGGTTTTGGGTATGACACAGGTATGTTGATTGAGTCATTTACTGGATTTATAGCTGCCCTTGAATTCTCGTCATTCCTCGTGCTTAATATACTGAAAGCTGATTTATTTTAATTATATATTTTATTTGCTGTTGGTGATGATTAATGTTTTATTCTTGTTTGGACATTGGTCAGTTTTTTATTATCAGAGTTTTGATAAATTCCTTGCATTGCAATGGTGTTTCCTAAAACTAAGTTTTTCCTGGTAGGGTGGTCCTCTGAAAACAACAGTTACTGGAGTTGAGATGTTCAAGAAGATGTTGGATCAAGGACAGGTAAGTTACTGTTATCTTCATATTGAGAGATATTTACATAGTGTATATTAAACTAATATGGATTTTCACATTTTGTAGGCCGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTGAAACGTGAAGACATTCAGCGTGGTCAGGTTAGAAGAAATGAACAAGCTTTTCCTCTTTGTTAGTTACTGTTGCAAGATTGAAGAGAACTTTATATTAATCTGTTCTTGTTTCAGTAGAAATTTGTAGAGTTCTCAAATTAAAATGCTAGAATCGATATACCACTTTACTGACGTTGTCTTGTTTTGAAAAGGTCATTGCTAAACCCGGTGCTACAAAAGCATCCAAGAGATTTGAAGCAGAGATATATGTCCTCACAAAGGATGAGGGTGGGCGACACACTGCTTTCTTCTCTAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATGTCACCGGAAAAGTAGAGTTGCCAGAAAATGTTAAAATGGTTATGCCTGGAGACAATGTTACTGCTGTGTTTGAATTGATCGTGCCTGTTCCACTTGAACCAGGTCGGTATATAATTTAATGAGGATGTCATTCATTTTTTTTCTTTTATTAAAAAGGACAATAAGGATGTTGTTTTTGCATGTTACTCAATCAACTCCCATTTTTTCATATGTTGCAATGTTATCCTCATCATAGGTTGAATTTATTATGCACTTTATGCTAGTGTGTGGAAAGCTCACCACTTGTTATTTTATTTTACAGGGCAAAGATTTGCCTTGAGAGAGGGTGGCAGAACAGTTGGTGCAGGTGTGGTGTCGAAAGTGATTAGCTGA
Protein sequence

>MS.gene72917.t1

MATSLALRNSSSKRLSPFLFSSQFHTSLTRSPISQSPLTDDATHSSSSIPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGIIKIGDEVEVLGMTQGGPLKTTVTGVEMFKKMLDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGATKASKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELIVPVPLEPGQRFALREGGRTVGAGVVSKVIS