AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028655

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028655.t1 MTR_2g095730 93.567 513 28 1 1 513 1 508 0.0 999
MS.gene028655.t1 MTR_2g095750 79.842 506 90 5 1 501 1 499 0.0 826
MS.gene028655.t1 MTR_2g095710 79.840 501 82 6 1 501 1 482 0.0 799
MS.gene028655.t1 MTR_4g057585 63.812 467 155 7 43 501 34 494 0.0 614
MS.gene028655.t1 MTR_4g057595 63.519 466 158 7 42 502 38 496 0.0 609
MS.gene028655.t1 MTR_1g094155 59.281 501 190 6 22 513 5 500 0.0 607
MS.gene028655.t1 MTR_4g057600 61.522 473 172 6 34 502 28 494 0.0 597
MS.gene028655.t1 MTR_1g050545 63.596 456 156 7 51 501 32 482 0.0 574
MS.gene028655.t1 MTR_4g057570 56.871 473 187 10 37 501 28 491 5.33e-180 514
MS.gene028655.t1 MTR_5g097180 31.702 429 268 9 90 508 32 445 1.91e-65 219
MS.gene028655.t1 MTR_4g084710 32.289 415 256 8 95 500 39 437 4.41e-63 213
MS.gene028655.t1 MTR_3g079590 29.345 443 281 12 77 508 74 495 4.65e-51 182
MS.gene028655.t1 MTR_3g079560 30.070 429 256 12 99 508 92 495 8.33e-51 181
MS.gene028655.t1 MTR_3g079570 28.764 445 280 12 77 508 75 495 2.87e-50 179
MS.gene028655.t1 MTR_1g020090 29.322 457 269 15 69 501 69 495 1.04e-47 172
MS.gene028655.t1 MTR_2g063000 26.797 459 288 15 71 499 19 459 1.15e-46 169
MS.gene028655.t1 MTR_3g079600 27.220 518 327 15 9 504 3 492 1.90e-46 169
MS.gene028655.t1 MTR_3g034290 29.454 421 261 15 96 499 85 486 3.41e-46 168
MS.gene028655.t1 MTR_3g434850 29.302 430 254 12 99 500 44 451 5.94e-46 167
MS.gene028655.t1 MTR_1g021010 29.314 423 251 14 99 501 90 484 2.88e-45 166
MS.gene028655.t1 MTR_2g018590 27.966 472 260 17 75 500 30 467 3.03e-45 165
MS.gene028655.t1 MTR_2g081620 27.506 429 259 13 99 499 55 459 3.56e-45 165
MS.gene028655.t1 MTR_2g062990 27.570 428 260 14 99 499 54 458 3.64e-45 165
MS.gene028655.t1 MTR_8g099930 27.103 428 271 15 99 500 47 459 3.92e-44 162
MS.gene028655.t1 MTR_7g021130 28.638 426 261 16 101 500 46 454 4.38e-44 162
MS.gene028655.t1 MTR_4g122950 26.606 436 274 14 97 499 51 473 5.27e-44 162
MS.gene028655.t1 MTR_1g021020 27.818 417 264 9 99 501 92 485 8.70e-44 162
MS.gene028655.t1 MTR_3g079620 29.176 449 270 13 76 501 73 496 1.04e-43 162
MS.gene028655.t1 MTR_3g498755 27.378 431 263 15 101 500 31 442 1.22e-43 160
MS.gene028655.t1 MTR_3g079630 27.716 451 278 15 77 504 74 499 1.28e-43 161
MS.gene028655.t1 MTR_2g062980 26.730 419 275 13 99 499 54 458 1.33e-43 161
MS.gene028655.t1 MTR_7g051430 26.022 465 264 15 99 499 44 492 6.35e-43 159
MS.gene028655.t1 MTR_4g122960 26.512 430 280 12 97 499 51 471 1.78e-42 158
MS.gene028655.t1 MTR_7g051430 34.902 255 147 5 99 348 44 284 2.31e-42 156
MS.gene028655.t1 MTR_0003s0560 28.706 425 267 15 91 499 79 483 1.61e-41 155
MS.gene028655.t1 MTR_7g080180 35.036 274 155 8 84 348 31 290 7.15e-41 153
MS.gene028655.t1 MTR_4g075150 29.524 420 269 15 99 500 48 458 7.25e-41 153
MS.gene028655.t1 MTR_1g095560 29.009 424 262 17 99 500 47 453 7.54e-41 153
MS.gene028655.t1 MTR_7g080180 35.036 274 155 8 84 348 31 290 1.25e-40 153
MS.gene028655.t1 MTR_2g018630 27.907 430 261 15 101 500 53 463 1.82e-40 152
MS.gene028655.t1 MTR_4g075150 29.384 422 269 15 99 500 48 460 3.57e-40 151
MS.gene028655.t1 MTR_4g089155 25.995 427 286 11 96 500 64 482 3.78e-40 152
MS.gene028655.t1 MTR_1g040370 27.737 411 242 16 101 500 46 412 2.79e-39 148
MS.gene028655.t1 MTR_2g449850 25.858 437 270 15 94 500 47 459 3.93e-39 148
MS.gene028655.t1 MTR_8g011350 37.443 219 127 4 85 298 35 248 6.31e-39 148
MS.gene028655.t1 MTR_8g011350 37.443 219 127 4 85 298 35 248 6.41e-39 148
MS.gene028655.t1 MTR_1g095540 26.777 422 274 13 99 500 47 453 1.29e-38 147
MS.gene028655.t1 MTR_2g012850 25.943 424 282 11 99 500 49 462 2.29e-38 146
MS.gene028655.t1 MTR_3g090130 26.386 451 272 13 91 500 22 453 3.10e-38 146
MS.gene028655.t1 MTR_1g095560 27.938 451 264 19 99 500 47 485 3.68e-38 146
MS.gene028655.t1 MTR_2g012860 26.316 437 282 15 91 500 47 470 7.71e-38 145
MS.gene028655.t1 MTR_3g090150 26.995 426 281 11 96 500 44 460 7.83e-38 145
MS.gene028655.t1 MTR_4g021535 28.019 414 252 15 113 497 65 461 1.11e-37 144
MS.gene028655.t1 MTR_7g013790 25.629 437 262 15 101 500 51 461 3.05e-37 143
MS.gene028655.t1 MTR_4g021510 27.542 472 284 16 57 496 18 463 3.55e-37 143
MS.gene028655.t1 MTR_5g072570 26.136 440 269 15 96 500 40 458 3.64e-37 143
MS.gene028655.t1 MTR_4g021530 27.670 412 256 13 113 497 69 465 4.22e-37 143
MS.gene028655.t1 MTR_3g045770 27.056 462 276 17 72 501 21 453 1.34e-36 141
MS.gene028655.t1 MTR_3g100420 25.299 502 313 13 36 497 12 491 2.21e-36 141
MS.gene028655.t1 MTR_3g034290 29.586 338 208 13 96 417 85 408 2.24e-36 139
MS.gene028655.t1 MTR_2g018600 35.784 204 122 5 101 298 50 250 3.65e-36 140
MS.gene028655.t1 MTR_4g021520 26.824 425 268 15 101 497 56 465 2.11e-34 135
MS.gene028655.t1 MTR_4g021500 25.000 424 234 12 113 497 504 882 9.62e-34 136
MS.gene028655.t1 MTR_4g021500 26.077 441 256 13 113 512 69 480 1.20e-33 136
MS.gene028655.t1 MTR_4g021500 26.077 441 256 13 113 512 69 480 1.48e-33 135
MS.gene028655.t1 MTR_4g021500 24.379 443 231 12 113 497 504 900 3.19e-32 131
MS.gene028655.t1 MTR_4g021490 25.761 427 245 13 113 497 69 465 1.87e-33 132
MS.gene028655.t1 MTR_2g063000 24.070 457 272 15 71 499 19 428 2.23e-33 132
MS.gene028655.t1 MTR_4g021520 38.537 205 115 7 101 298 56 256 1.66e-31 126
MS.gene028655.t1 MTR_0003s0560 33.990 203 130 4 91 291 79 279 3.31e-31 124
MS.gene028655.t1 MTR_4g056520 25.587 426 263 12 112 498 44 454 7.10e-29 119
MS.gene028655.t1 MTR_2g009200 24.890 454 276 16 71 498 21 435 1.90e-28 117
MS.gene028655.t1 MTR_2g084530 26.316 418 258 13 112 493 44 447 5.18e-27 114
MS.gene028655.t1 MTR_2g018630 25.205 365 229 13 161 500 13 358 2.60e-23 101
MS.gene028655.t1 MTR_1g102130 22.506 431 253 16 101 500 107 487 3.42e-21 97.1
MS.gene028655.t1 MTR_4g021535 24.163 418 216 17 113 497 65 414 1.36e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028655.t1 AT3G45010 59.608 510 191 7 1 503 1 502 0.0 616
MS.gene028655.t1 AT3G10410 59.600 500 180 8 14 501 7 496 0.0 616
MS.gene028655.t1 AT5G22980 59.920 499 182 7 17 504 7 498 0.0 597
MS.gene028655.t1 AT5G22960 61.310 168 44 3 93 260 28 174 1.49e-64 208
MS.gene028655.t1 AT1G15000 31.159 414 257 11 95 500 31 424 4.21e-52 183
MS.gene028655.t1 AT2G22920 30.856 444 263 19 71 499 18 432 2.70e-51 181
MS.gene028655.t1 AT2G22970 29.438 445 268 18 71 500 18 431 5.36e-50 177
MS.gene028655.t1 AT4G12910 27.500 480 261 15 84 499 38 494 3.78e-48 174
MS.gene028655.t1 AT2G22980 29.018 448 262 17 71 500 19 428 4.64e-48 172
MS.gene028655.t1 AT3G25420 28.333 480 261 16 84 500 33 492 6.01e-48 173
MS.gene028655.t1 AT1G73300 29.412 442 272 16 71 500 26 439 1.74e-47 171
MS.gene028655.t1 AT1G73300 29.412 442 272 16 71 500 26 439 1.74e-47 171
MS.gene028655.t1 AT2G23010 29.462 465 246 21 71 500 18 435 2.21e-47 170
MS.gene028655.t1 AT3G12203 26.905 420 259 13 100 500 24 414 2.25e-47 170
MS.gene028655.t1 AT3G12203 26.905 420 259 13 100 500 45 435 2.65e-47 170
MS.gene028655.t1 AT2G22920 32.552 384 222 16 71 440 18 378 2.68e-47 169
MS.gene028655.t1 AT2G23010 29.462 465 246 21 71 500 18 435 6.67e-47 169
MS.gene028655.t1 AT3G12203 27.340 406 247 13 114 500 1 377 1.64e-46 166
MS.gene028655.t1 AT2G22970 31.510 384 224 15 71 440 18 376 1.77e-46 167
MS.gene028655.t1 AT2G22970 29.330 433 261 17 71 488 18 420 3.21e-46 167
MS.gene028655.t1 AT3G12240 29.736 417 252 16 100 500 43 434 4.37e-46 167
MS.gene028655.t1 AT5G36180 28.118 441 279 13 71 500 26 439 6.18e-46 166
MS.gene028655.t1 AT2G22980 29.176 425 246 16 71 477 19 406 3.39e-45 164
MS.gene028655.t1 AT1G73270 27.088 443 281 15 71 500 26 439 3.56e-45 164
MS.gene028655.t1 AT2G22980 28.736 435 255 16 71 487 19 416 4.34e-45 164
MS.gene028655.t1 AT3G10450 28.018 439 261 16 83 500 31 435 4.47e-45 164
MS.gene028655.t1 AT1G73270 27.088 443 281 15 71 500 26 439 4.93e-45 164
MS.gene028655.t1 AT4G30810 26.651 439 256 14 97 499 50 458 9.84e-45 164
MS.gene028655.t1 AT5G23210 28.959 442 260 15 99 500 65 492 9.87e-45 164
MS.gene028655.t1 AT1G73280 27.602 442 280 14 71 500 26 439 1.16e-44 163
MS.gene028655.t1 AT1G73290 27.314 443 278 15 71 500 25 436 1.33e-44 163
MS.gene028655.t1 AT4G15100 27.252 433 270 13 99 499 58 477 1.48e-44 164
MS.gene028655.t1 AT2G22990 29.067 461 251 21 71 500 16 431 1.79e-44 162
MS.gene028655.t1 AT3G17180 26.906 446 262 14 96 500 50 472 2.88e-44 163
MS.gene028655.t1 AT4G12910 35.556 270 151 7 84 348 38 289 5.72e-44 161
MS.gene028655.t1 AT3G10450 27.446 419 253 14 103 500 4 392 7.48e-44 160
MS.gene028655.t1 AT5G08260 29.953 424 258 15 99 493 53 466 1.37e-43 161
MS.gene028655.t1 AT1G28110 27.059 425 271 13 99 499 45 454 2.94e-43 160
MS.gene028655.t1 AT1G28110 27.059 425 271 13 99 499 45 454 2.94e-43 160
MS.gene028655.t1 AT3G12230 28.537 417 257 15 100 500 42 433 3.95e-43 159
MS.gene028655.t1 AT1G61130 27.791 421 275 13 99 499 45 456 5.26e-43 159
MS.gene028655.t1 AT3G12220 26.316 418 267 14 100 501 42 434 1.04e-42 157
MS.gene028655.t1 AT1G73290 29.058 382 234 12 71 440 25 381 1.28e-42 157
MS.gene028655.t1 AT1G73310 27.928 444 276 16 71 500 26 439 1.30e-42 157
MS.gene028655.t1 AT1G11080 27.419 434 270 13 99 499 64 485 1.85e-42 158
MS.gene028655.t1 AT1G11080 27.419 434 270 13 99 499 64 485 2.00e-42 158
MS.gene028655.t1 AT2G22920 34.713 314 178 12 71 376 18 312 2.44e-42 154
MS.gene028655.t1 AT5G23210 40.686 204 116 5 99 298 65 267 2.61e-42 157
MS.gene028655.t1 AT2G23000 28.029 421 256 15 101 500 41 435 3.30e-42 156
MS.gene028655.t1 AT2G23000 28.029 421 256 15 101 500 41 435 3.30e-42 156
MS.gene028655.t1 AT3G12220 26.667 405 256 14 113 501 25 404 4.24e-42 155
MS.gene028655.t1 AT2G33530 27.506 429 268 13 99 500 47 459 5.75e-42 156
MS.gene028655.t1 AT2G24010 28.736 435 272 13 84 500 34 448 5.80e-42 156
MS.gene028655.t1 AT2G35770 27.361 413 256 11 101 490 54 445 6.82e-42 156
MS.gene028655.t1 AT3G63470 29.257 417 249 15 99 493 95 487 7.90e-42 157
MS.gene028655.t1 AT3G07990 26.620 432 268 13 96 500 45 454 9.01e-42 155
MS.gene028655.t1 AT3G52000 28.537 410 270 13 99 498 78 474 1.18e-41 155
MS.gene028655.t1 AT4G30610 26.852 432 272 14 97 500 44 459 2.33e-41 154
MS.gene028655.t1 AT1G73290 33.448 290 156 12 71 342 25 295 1.73e-40 148
MS.gene028655.t1 AT2G22990 28.995 438 236 20 71 477 16 409 2.53e-40 152
MS.gene028655.t1 AT3G10450 27.644 416 247 15 83 477 31 413 2.58e-40 150
MS.gene028655.t1 AT2G22990 28.959 442 237 20 71 479 16 413 2.77e-40 150
MS.gene028655.t1 AT3G52010 27.778 432 275 15 84 498 68 479 3.97e-40 152
MS.gene028655.t1 AT1G33540 25.977 435 270 14 101 500 45 462 5.99e-40 150
MS.gene028655.t1 AT2G22970 33.438 317 183 12 71 379 18 314 1.19e-39 146
MS.gene028655.t1 AT2G24000 27.376 442 277 16 84 499 34 457 2.79e-39 149
MS.gene028655.t1 AT1G33540 25.866 433 269 14 103 500 4 419 2.90e-39 148
MS.gene028655.t1 AT3G10450 27.020 396 239 13 103 477 4 370 3.93e-39 146
MS.gene028655.t1 AT3G52020 26.932 427 259 15 99 498 93 493 4.53e-39 149
MS.gene028655.t1 AT2G22980 32.317 328 187 14 71 386 19 323 5.34e-39 145
MS.gene028655.t1 AT1G73310 29.091 385 232 14 71 440 26 384 9.05e-39 147
MS.gene028655.t1 AT2G35780 27.166 427 268 15 97 500 42 448 2.12e-38 146
MS.gene028655.t1 AT1G43780 28.604 437 253 17 101 500 53 467 8.96e-38 145
MS.gene028655.t1 AT1G73280 35.622 233 137 6 71 298 26 250 1.87e-37 142
MS.gene028655.t1 AT2G22990 27.766 461 248 22 71 500 16 422 1.95e-37 143
MS.gene028655.t1 AT2G24010 27.556 450 273 14 84 500 34 463 2.50e-37 143
MS.gene028655.t1 AT2G12480 26.682 446 272 15 84 500 35 454 8.41e-37 142
MS.gene028655.t1 AT2G12480 28.000 425 269 15 84 500 35 430 1.00e-36 141
MS.gene028655.t1 AT5G09640 25.696 467 288 19 71 500 19 463 1.57e-36 141
MS.gene028655.t1 AT2G12480 27.830 424 269 15 84 500 35 428 4.82e-36 139
MS.gene028655.t1 AT3G17180 37.255 204 121 6 96 294 50 251 1.28e-35 138
MS.gene028655.t1 AT5G42230 27.594 424 277 14 99 500 42 457 1.77e-35 138
MS.gene028655.t1 AT5G42230 27.594 424 277 14 99 500 42 457 1.77e-35 138
MS.gene028655.t1 AT3G02110 25.349 430 277 12 101 500 53 468 2.24e-35 138
MS.gene028655.t1 AT2G12480 27.765 425 269 15 84 500 35 429 6.31e-35 136
MS.gene028655.t1 AT2G05850 26.106 452 289 16 67 498 53 479 6.77e-35 137
MS.gene028655.t1 AT5G23210 28.218 404 237 14 136 500 8 397 6.97e-35 135
MS.gene028655.t1 AT3G12220 33.981 206 130 3 100 300 42 246 1.03e-34 134
MS.gene028655.t1 AT5G42240 25.754 431 276 13 99 500 46 461 2.69e-34 135
MS.gene028655.t1 AT5G23210 28.040 403 237 14 137 500 8 396 4.19e-34 133
MS.gene028655.t1 AT2G24010 26.105 475 273 15 84 500 5 459 1.20e-32 130
MS.gene028655.t1 AT5G23210 41.212 165 93 4 137 298 8 171 1.18e-31 125
MS.gene028655.t1 AT2G27920 26.478 423 255 14 112 493 45 452 1.25e-31 127
MS.gene028655.t1 AT5G36180 25.723 346 231 8 161 500 12 337 1.16e-28 116
MS.gene028655.t1 AT5G36180 25.723 346 231 8 161 500 12 337 1.16e-28 116
MS.gene028655.t1 AT3G56540 40.141 142 81 4 99 238 93 232 1.44e-28 114
MS.gene028655.t1 AT2G24010 34.468 235 126 9 84 298 5 231 2.09e-28 116
MS.gene028655.t1 AT1G73280 25.072 347 232 9 161 500 12 337 7.89e-28 114
MS.gene028655.t1 AT2G22990 26.554 354 196 15 173 500 2 317 8.71e-28 114
MS.gene028655.t1 AT2G22990 26.554 354 196 15 173 500 2 317 2.92e-27 112
MS.gene028655.t1 AT2G27920 25.635 394 241 13 135 493 4 380 3.41e-25 107
MS.gene028655.t1 AT2G22980 26.101 318 192 10 173 477 2 289 4.38e-25 105
MS.gene028655.t1 AT5G36180 25.077 323 217 7 161 477 12 315 1.70e-24 104
MS.gene028655.t1 AT5G36180 26.667 285 190 5 161 440 12 282 5.74e-24 103
MS.gene028655.t1 AT1G73280 23.724 333 226 9 175 500 1 312 4.52e-23 100
MS.gene028655.t1 AT1G73310 25.589 297 178 9 161 440 12 282 2.30e-22 98.6
MS.gene028655.t1 AT2G27920 24.277 346 220 10 182 493 48 385 8.81e-19 89.0
MS.gene028655.t1 AT2G24000 22.648 287 191 9 234 499 118 394 2.67e-11 65.9

Find 121 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCTCTGGTATGTTTA+TGG 0.137565 2.1:-7954454 None:intergenic
ACAACATGGCATCATCTTTA+AGG 0.142828 2.1:+7954265 None:intergenic
ATACAACAAGAAAGTGATTT+TGG 0.209981 2.1:-7957027 None:intergenic
TATGCCATGTACTGAATTTC+AGG 0.244869 2.1:-7955812 None:intergenic
TCCCTTGTTTGGAATGAATA+TGG 0.250663 2.1:+7955021 MS.gene028655:CDS
CTTCGTTTGCTTTGTTTCCT+TGG 0.259831 2.1:-7955616 None:intergenic
GTCAGGTCAGACAACATTTA+AGG 0.308088 2.1:+7956631 MS.gene028655:CDS
TGGACCTTTGGCCTTCCTTA+AGG 0.320499 2.1:+7956712 MS.gene028655:CDS
ACAAGAACTTGTCCCTTGTT+TGG 0.329032 2.1:+7955010 MS.gene028655:CDS
AATAAACAGGGCTTTGCTAT+TGG 0.339075 2.1:+7955773 MS.gene028655:intron
AGACAATGGACTGATTAATA+AGG 0.347573 2.1:+7955850 MS.gene028655:CDS
CACTTCAGATGTTACAAGAT+TGG 0.348561 2.1:+7956975 MS.gene028655:CDS
CGATTTGTATGACTTCTTGC+AGG 0.353476 2.1:+7955253 MS.gene028655:CDS
CAGGGCTTTGCTATTGGTAA+TGG 0.354719 2.1:+7955779 MS.gene028655:intron
CTCATTTGGTAGGGAATTCA+AGG 0.357235 2.1:+7956588 MS.gene028655:intron
TCTGAAAAGCCATGGACCTT+TGG 0.366511 2.1:+7956700 MS.gene028655:CDS
AAACATTTACCTAGCAGCTT+TGG 0.372493 2.1:-7954595 None:intergenic
TAAAGGAAGCTTTAGGTGTT+GGG 0.376899 2.1:+7956340 MS.gene028655:CDS
ACAGCATACATTAGTGTTGC+CGG 0.385275 2.1:-7956134 None:intergenic
CCTGTCGTCATATGGTTAAC+TGG 0.391322 2.1:+7954922 MS.gene028655:CDS
GGTTATTCTGTTGAAGAACT+TGG 0.406042 2.1:+7954540 MS.gene028655:CDS
AAGAAATGTGAGGGAACTTT+CGG 0.413541 2.1:+7956267 MS.gene028655:CDS
TGTCTGACCTGACCACTTCA+TGG 0.416219 2.1:-7956621 None:intergenic
GGGAACTTTCGGTGATTGTC+AGG 0.431951 2.1:+7956278 MS.gene028655:CDS
TTGTCCTTTGAGAACTGAAA+AGG 0.433409 2.1:-7954991 None:intergenic
GGCTGGTCACATGGTTCCTA+TGG 0.441603 2.1:+7956937 MS.gene028655:CDS
GTAGACCAACCCATTGGATC+AGG 0.443437 2.1:+7955170 MS.gene028655:CDS
GAGAAGAAGTTCACTTTCCC+TGG 0.449586 2.1:+7954504 MS.gene028655:CDS
CTTTGAATCTCGAAACAGTA+AGG 0.449789 2.1:+7954894 MS.gene028655:CDS
TCCCCTTCAACTCTCATAAG+AGG 0.452569 2.1:+7954408 MS.gene028655:CDS
AACATCTGAAGTGCAACTTT+TGG 0.458205 2.1:-7956965 None:intergenic
TTTGGGATGCAGTTGAAGAA+AGG 0.463192 2.1:-7954355 None:intergenic
AGTCCTCTTATGAGAGTTGA+AGG 0.465195 2.1:-7954411 None:intergenic
AAGACAGTAAAGGAAGCTTT+AGG 0.467806 2.1:+7956333 MS.gene028655:CDS
GCAATTTCACTGCCGCATCC+TGG 0.467824 2.1:-7954949 None:intergenic
AAGGGGATGCAGTTGAAGAA+AGG 0.469788 2.1:-7954392 None:intergenic
TAAAAGACAGACACACTTTG+AGG 0.470510 2.1:-7954290 None:intergenic
CTTAGTACACAGTGCCTTGA+CGG 0.470740 2.1:+7956389 MS.gene028655:CDS
ATTCCTGCTCTTCTTGAGGA+TGG 0.475493 2.1:+7956441 MS.gene028655:CDS
GAAGAACTTGGTCATCATGC+AGG 0.475724 2.1:+7954552 MS.gene028655:CDS
TTTGGAACAATAGGTGAAAG+AGG 0.477010 2.1:+7956916 MS.gene028655:intron
CATGTACTGAATTTCAGGAT+TGG 0.477634 2.1:-7955807 None:intergenic
GTAAAGGAAGCTTTAGGTGT+TGG 0.480724 2.1:+7956339 MS.gene028655:CDS
TTTGTTTCCTTGGTGAACCC+TGG 0.480841 2.1:-7955606 None:intergenic
TTGGTTGATAGTGAAGAAGC+AGG 0.485779 2.1:+7956674 MS.gene028655:CDS
ACAGTGCCTTGACGGAGGAT+TGG 0.498762 2.1:+7956397 MS.gene028655:CDS
AGGAATTCATATAAATCTAA+AGG 0.501724 2.1:+7955637 MS.gene028655:CDS
TCTTCTCCACAATGTTTCCA+TGG 0.501980 2.1:-7954488 None:intergenic
TACCTAGCAGCTTTGGAATG+AGG 0.502116 2.1:-7954588 None:intergenic
TGAACCCTGGATGCAAAAGC+TGG 0.504759 2.1:-7955593 None:intergenic
CAATCCTGAAATTCAGTACA+TGG 0.506627 2.1:+7955808 MS.gene028655:CDS
GGGTATTCCTGCTCTTCTTG+AGG 0.508272 2.1:+7956437 MS.gene028655:CDS
ATTTATCTGTTAGGCACTGA+AGG 0.510266 2.1:+7956046 MS.gene028655:intron
GTTGATCCCACCGTGTCTAA+AGG 0.511902 2.1:+7955895 MS.gene028655:CDS
AATCATTCTTTGTGAACTGA+GGG 0.514863 2.1:-7955532 None:intergenic
CGCCGTGATGAAGACAGTAT+TGG 0.518941 2.1:+7955227 MS.gene028655:CDS
CCAGTTAACCATATGACGAC+AGG 0.521891 2.1:-7954922 None:intergenic
ATGTCCAGCGTATGACTCTC+CGG 0.523072 2.1:-7955564 None:intergenic
ATGAAGGTGAAATGAAGAAG+AGG 0.524790 2.1:-7954329 None:intergenic
ATTCCATCCTCAAGAAGAGC+AGG 0.526347 2.1:-7956444 None:intergenic
AGGATGACCCTGTCGTCATA+TGG 0.526809 2.1:+7954914 MS.gene028655:CDS
AGGACATGAGGATCATTCTC+TGG 0.531938 2.1:-7954465 None:intergenic
GAACAATAGGTGAAAGAGGC+TGG 0.533723 2.1:+7956920 MS.gene028655:intron
GATCTAATATGCAATTGGCT+TGG 0.534093 2.1:+7956495 MS.gene028655:CDS
ATGTTACAAGATTGGATGCA+AGG 0.542295 2.1:+7956983 MS.gene028655:CDS
ATATGGTTAACTGGAGGTCC+AGG 0.542845 2.1:+7954931 MS.gene028655:CDS
GTTGATGCCATGAAGTGGTC+AGG 0.543073 2.1:+7956614 MS.gene028655:CDS
CTTGAACATGAAGACAGTAA+AGG 0.545435 2.1:+7956323 MS.gene028655:CDS
AAATCATTCTTTGTGAACTG+AGG 0.546581 2.1:-7955533 None:intergenic
ATATTTGTAGACCAACCCAT+TGG 0.549517 2.1:+7955164 MS.gene028655:CDS
TTGTTTGGAATGAATATGGA+TGG 0.552020 2.1:+7955025 MS.gene028655:CDS
ATAGCTGAAACCTGATCCAA+TGG 0.556117 2.1:-7955180 None:intergenic
CTGCCGCCTTTAGACACGGT+GGG 0.565722 2.1:-7955901 None:intergenic
TCCTCTTATGAGAGTTGAAG+GGG 0.569189 2.1:-7954409 None:intergenic
AAAGGAAGCTTTAGGTGTTG+GGG 0.573810 2.1:+7956341 MS.gene028655:CDS
AGTTGAAGAAAGGAGAATGA+AGG 0.577019 2.1:-7954345 None:intergenic
AATGATCCTCATGTCCTCCA+TGG 0.578894 2.1:+7954471 MS.gene028655:CDS
TGTTACAAGATTGGATGCAA+GGG 0.580202 2.1:+7956984 MS.gene028655:CDS
GCAGGAATTCTGAAAAGCCA+TGG 0.580565 2.1:+7956692 MS.gene028655:CDS
TTAACTGGAGGTCCAGGATG+CGG 0.584480 2.1:+7954937 MS.gene028655:CDS
GGTGAAAGAGGCTGGTCACA+TGG 0.589518 2.1:+7956928 MS.gene028655:intron
GTCCTCTTATGAGAGTTGAA+GGG 0.590174 2.1:-7954410 None:intergenic
TTTGGTAGGGAATTCAAGGT+GGG 0.590648 2.1:+7956592 MS.gene028655:intron
TAAGGAAGGCCAAAGGTCCA+TGG 0.590847 2.1:-7956709 None:intergenic
GACATTAGAAAGAAATGTGA+GGG 0.591685 2.1:+7956258 MS.gene028655:CDS
TTTCATCCAATCCTCCGTCA+AGG 0.594251 2.1:-7956403 None:intergenic
TTAAACACAAACCTTAAGGA+AGG 0.596840 2.1:-7956723 None:intergenic
ACTGAAGGTGGACAAGCATG+TGG 0.599485 2.1:+7956061 MS.gene028655:CDS
ATCCATATTCATTCCAAACA+AGG 0.604369 2.1:-7955023 None:intergenic
TTCCTCATTCCAAAGCTGCT+AGG 0.605027 2.1:+7954586 MS.gene028655:CDS
TAACCAGAGTCATCAAAACC+AGG 0.605492 2.1:-7954522 None:intergenic
TAGCTGAAACCTGATCCAAT+GGG 0.613889 2.1:-7955179 None:intergenic
TGAAACCTGATCCAATGGGT+TGG 0.614257 2.1:-7955175 None:intergenic
ACAGATTATGCATTAGACAA+TGG 0.621197 2.1:+7955836 MS.gene028655:CDS
GAATGAATATGGATGGGACA+AGG 0.625882 2.1:+7955032 MS.gene028655:CDS
GCGAATATCACTGTGAACAT+CGG 0.629348 2.1:-7955207 None:intergenic
ATGTTTCCATGGAGGACATG+AGG 0.630827 2.1:-7954477 None:intergenic
TATCTGTTAGGCACTGAAGG+TGG 0.631703 2.1:+7956049 MS.gene028655:intron
TATCAGATCACAAACATCAC+CGG 0.631908 2.1:+7956115 MS.gene028655:CDS
ATTTGGTAGGGAATTCAAGG+TGG 0.632416 2.1:+7956591 MS.gene028655:intron
AAGAACTTGGTCATCATGCA+GGG 0.634335 2.1:+7954553 MS.gene028655:CDS
TGTCCTCCATGGAAACATTG+TGG 0.634451 2.1:+7954482 MS.gene028655:CDS
TCCATATTCATTCCAAACAA+GGG 0.638155 2.1:-7955022 None:intergenic
CGACATTAGAAAGAAATGTG+AGG 0.640409 2.1:+7956257 MS.gene028655:CDS
AACCAGAGTCATCAAAACCA+GGG 0.649229 2.1:-7954521 None:intergenic
GTCGTCATATGGTTAACTGG+AGG 0.656929 2.1:+7954925 MS.gene028655:CDS
ATCAAGTTACTTGTGTACGC+CGG 0.657584 2.1:+7956465 MS.gene028655:CDS
CAGTTAACCATATGACGACA+GGG 0.657833 2.1:-7954921 None:intergenic
TGCCAATACTGTCTTCATCA+CGG 0.659820 2.1:-7955229 None:intergenic
GATCCCACCGTGTCTAAAGG+CGG 0.662660 2.1:+7955898 MS.gene028655:CDS
AGTACACAGTGCCTTGACGG+AGG 0.666620 2.1:+7956392 MS.gene028655:CDS
CTGAAGGTGGACAAGCATGT+GGG 0.668943 2.1:+7956062 MS.gene028655:CDS
TGTTTGGAATGAATATGGAT+GGG 0.672561 2.1:+7955026 MS.gene028655:CDS
TCTCCACAATGTTTCCATGG+AGG 0.678885 2.1:-7954485 None:intergenic
TCTGCCGCCTTTAGACACGG+TGG 0.679091 2.1:-7955902 None:intergenic
ATTACCGGAGAGTCATACGC+TGG 0.680484 2.1:+7955560 MS.gene028655:CDS
GGTGGGTTGATGCCATGAAG+TGG 0.684602 2.1:+7956609 MS.gene028655:CDS
AATATCACTGTGAACATCGG+TGG 0.689654 2.1:-7955204 None:intergenic
CAAGGAAACAAAGCAAACGA+AGG 0.691308 2.1:+7955617 MS.gene028655:CDS
TTTGCATCCAGGGTTCACCA+AGG 0.697313 2.1:+7955599 MS.gene028655:CDS
CAAACCTTAAGGAAGGCCAA+AGG 0.724280 2.1:-7956716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTTTATTTTTAAAAG+TGG + chr2.1:7954725-7954744 MS.gene028655:intron 10.0%
!! GAACTTTATAAAAGAAAAAT+GGG - chr2.1:7954663-7954682 None:intergenic 15.0%
!! TGTTTATTATAAAAGATGAA+AGG - chr2.1:7955761-7955780 None:intergenic 15.0%
!!! AAGAATGATTTTTATATTAC+CGG + chr2.1:7955545-7955564 MS.gene028655:CDS 15.0%
!!! TAATAAATTCCTCTAAAAAA+AGG + chr2.1:7954692-7954711 MS.gene028655:intron 15.0%
!!! TATTAATAACCTTTTTTTAG+AGG - chr2.1:7954704-7954723 None:intergenic 15.0%
!!! TATTTTTTTTTTGGAACAAT+AGG + chr2.1:7956907-7956926 MS.gene028655:intron 15.0%
!!! TTCATCTTTTATAATAAACA+GGG + chr2.1:7955761-7955780 MS.gene028655:intron 15.0%
!!! TTTCATCTTTTATAATAAAC+AGG + chr2.1:7955760-7955779 MS.gene028655:intron 15.0%
!! AAAAAGATCTAATATGCAAT+TGG + chr2.1:7956490-7956509 MS.gene028655:CDS 20.0%
!! AAATTAGTAAAATTCTCTCT+TGG - chr2.1:7955984-7956003 None:intergenic 20.0%
!! AGGAATTCATATAAATCTAA+AGG + chr2.1:7955637-7955656 MS.gene028655:CDS 20.0%
!! CGAACTTTATAAAAGAAAAA+TGG - chr2.1:7954664-7954683 None:intergenic 20.0%
!!! ACTTAAATTTTTACAATGAC+AGG + chr2.1:7955493-7955512 MS.gene028655:intron 20.0%
!!! ATAAATTAAGAGTGTCAATA+AGG - chr2.1:7956032-7956051 None:intergenic 20.0%
!!! ATTTGTATCTTGTTTAAGAT+TGG - chr2.1:7956539-7956558 None:intergenic 20.0%
!!! TATGTTATTTAGATTAAGTG+AGG + chr2.1:7954775-7954794 MS.gene028655:intron 20.0%
!!! TTTTTTTACGAGAAATTAAG+TGG + chr2.1:7955340-7955359 MS.gene028655:intron 20.0%
! ACACTCTTAATTTATCTGTT+AGG + chr2.1:7956037-7956056 MS.gene028655:intron 25.0%
! ACAGACACTTCAAATTAAAA+GGG + chr2.1:7956794-7956813 MS.gene028655:intron 25.0%
! ACTAAAGTGGAAAAAAGAAA+AGG - chr2.1:7955077-7955096 None:intergenic 25.0%
! ATAACTGTGTATTCATACAA+AGG + chr2.1:7955685-7955704 MS.gene028655:intron 25.0%
! CTAAAGTGGAAAAAAGAAAA+GGG - chr2.1:7955076-7955095 None:intergenic 25.0%
! GATTAATCACTTGAATTAAG+TGG + chr2.1:7955306-7955325 MS.gene028655:intron 25.0%
! TACAGACACTTCAAATTAAA+AGG + chr2.1:7956793-7956812 MS.gene028655:intron 25.0%
! TGACATAACAAATTGTTCAA+TGG - chr2.1:7954852-7954871 None:intergenic 25.0%
!! ATACAACAAGAAAGTGATTT+TGG - chr2.1:7957030-7957049 None:intergenic 25.0%
!!! ATTGCCTTGTTTTATGAAAA+TGG + chr2.1:7954967-7954986 MS.gene028655:CDS 25.0%
!!! CTTTTTTCTTTCTCTTTTGT+AGG + chr2.1:7955130-7955149 MS.gene028655:intron 25.0%
!!! TATTTTTAAAAGTGGACAGA+CGG + chr2.1:7954733-7954752 MS.gene028655:intron 25.0%
!!! TTATGGAACTTTTAGGAAAA+AGG - chr2.1:7954440-7954459 None:intergenic 25.0%
AAATCATTCTTTGTGAACTG+AGG - chr2.1:7955536-7955555 None:intergenic 30.0%
AATCATTCTTTGTGAACTGA+GGG - chr2.1:7955535-7955554 None:intergenic 30.0%
ACAGATTATGCATTAGACAA+TGG + chr2.1:7955836-7955855 MS.gene028655:CDS 30.0%
ACATCATAATAATGTGTGCA+TGG + chr2.1:7954818-7954837 MS.gene028655:intron 30.0%
ATCATTCTCTGGTATGTTTA+TGG - chr2.1:7954457-7954476 None:intergenic 30.0%
ATCCATATTCATTCCAAACA+AGG - chr2.1:7955026-7955045 None:intergenic 30.0%
ATCCTTAAACACAAACCTTA+AGG - chr2.1:7956730-7956749 None:intergenic 30.0%
CGACATTACATACTATCTAT+TGG + chr2.1:7955417-7955436 MS.gene028655:intron 30.0%
GACATTAGAAAGAAATGTGA+GGG + chr2.1:7956258-7956277 MS.gene028655:CDS 30.0%
TCAACCAAAAATGAAGTTGT+AGG - chr2.1:7956662-7956681 None:intergenic 30.0%
TCCATATTCATTCCAAACAA+GGG - chr2.1:7955025-7955044 None:intergenic 30.0%
TGGATGAAAAATCATGAAGT+GGG + chr2.1:7956417-7956436 MS.gene028655:CDS 30.0%
TGTATCAGTTAGAACTAAAG+TGG - chr2.1:7955090-7955109 None:intergenic 30.0%
TTAAACACAAACCTTAAGGA+AGG - chr2.1:7956726-7956745 None:intergenic 30.0%
TTCCTTAAGGTTTGTGTTTA+AGG + chr2.1:7956725-7956744 MS.gene028655:intron 30.0%
TTGGATGAAAAATCATGAAG+TGG + chr2.1:7956416-7956435 MS.gene028655:CDS 30.0%
! AGGACCATTTTCATAAAACA+AGG - chr2.1:7954974-7954993 None:intergenic 30.0%
! GCATATTAGATCTTTTTCTC+CGG - chr2.1:7956487-7956506 None:intergenic 30.0%
! GGTATGTTTATGGAACTTTT+AGG - chr2.1:7954447-7954466 None:intergenic 30.0%
! TGTTTGGAATGAATATGGAT+GGG + chr2.1:7955026-7955045 MS.gene028655:CDS 30.0%
! TTGTTTGGAATGAATATGGA+TGG + chr2.1:7955025-7955044 MS.gene028655:CDS 30.0%
!! AAGGAGTATGTCATTGTTTT+TGG - chr2.1:7954376-7954395 None:intergenic 30.0%
!! AGACAATGGACTGATTAATA+AGG + chr2.1:7955850-7955869 MS.gene028655:CDS 30.0%
!! AGGAGTATGTCATTGTTTTT+GGG - chr2.1:7954375-7954394 None:intergenic 30.0%
!! CAATTTGTTATGTCAATTGC+AGG + chr2.1:7954857-7954876 MS.gene028655:intron 30.0%
AAACATTTACCTAGCAGCTT+TGG - chr2.1:7954598-7954617 None:intergenic 35.0%
AAATGTGCTTCTCATTTGGT+AGG + chr2.1:7956578-7956597 MS.gene028655:intron 35.0%
AAGAAATGTGAGGGAACTTT+CGG + chr2.1:7956267-7956286 MS.gene028655:CDS 35.0%
AAGACAGTAAAGGAAGCTTT+AGG + chr2.1:7956333-7956352 MS.gene028655:CDS 35.0%
AATGTGCTTCTCATTTGGTA+GGG + chr2.1:7956579-7956598 MS.gene028655:intron 35.0%
AGTTGAAGAAAGGAGAATGA+AGG - chr2.1:7954348-7954367 None:intergenic 35.0%
ATATTTGTAGACCAACCCAT+TGG + chr2.1:7955164-7955183 MS.gene028655:CDS 35.0%
ATGAAGGTGAAATGAAGAAG+AGG - chr2.1:7954332-7954351 None:intergenic 35.0%
ATGTTACAAGATTGGATGCA+AGG + chr2.1:7956983-7957002 MS.gene028655:CDS 35.0%
CAATCCTGAAATTCAGTACA+TGG + chr2.1:7955808-7955827 MS.gene028655:CDS 35.0%
CACTTCAGATGTTACAAGAT+TGG + chr2.1:7956975-7956994 MS.gene028655:CDS 35.0%
CATGTACTGAATTTCAGGAT+TGG - chr2.1:7955810-7955829 None:intergenic 35.0%
CGACATTAGAAAGAAATGTG+AGG + chr2.1:7956257-7956276 MS.gene028655:CDS 35.0%
CTCTAAATGTGCTTCTCATT+TGG + chr2.1:7956574-7956593 MS.gene028655:intron 35.0%
CTTGAACATGAAGACAGTAA+AGG + chr2.1:7956323-7956342 MS.gene028655:CDS 35.0%
CTTTGAATCTCGAAACAGTA+AGG + chr2.1:7954894-7954913 MS.gene028655:CDS 35.0%
GATCTAATATGCAATTGGCT+TGG + chr2.1:7956495-7956514 MS.gene028655:CDS 35.0%
GATGTATTCATGAGCATAAG+AGG + chr2.1:7956747-7956766 MS.gene028655:intron 35.0%
GCACACATTATTATGATGTG+TGG - chr2.1:7954817-7954836 None:intergenic 35.0%
GGTTATTCTGTTGAAGAACT+TGG + chr2.1:7954540-7954559 MS.gene028655:CDS 35.0%
TAAAAGACAGACACACTTTG+AGG - chr2.1:7954293-7954312 None:intergenic 35.0%
TATCAGATCACAAACATCAC+CGG + chr2.1:7956115-7956134 MS.gene028655:CDS 35.0%
TATGCCATGTACTGAATTTC+AGG - chr2.1:7955815-7955834 None:intergenic 35.0%
TGTTACAAGATTGGATGCAA+GGG + chr2.1:7956984-7957003 MS.gene028655:CDS 35.0%
! AATAAACAGGGCTTTGCTAT+TGG + chr2.1:7955773-7955792 MS.gene028655:intron 35.0%
! ACAATGACAGGCATTTTTCA+AGG + chr2.1:7955505-7955524 MS.gene028655:intron 35.0%
! GTCTCCTACAACTTCATTTT+TGG + chr2.1:7956655-7956674 MS.gene028655:CDS 35.0%
! TCCCTTGTTTGGAATGAATA+TGG + chr2.1:7955021-7955040 MS.gene028655:CDS 35.0%
! TTGTCCTTTGAGAACTGAAA+AGG - chr2.1:7954994-7955013 None:intergenic 35.0%
! TTTGGAACAATAGGTGAAAG+AGG + chr2.1:7956916-7956935 MS.gene028655:intron 35.0%
!! AACATCTGAAGTGCAACTTT+TGG - chr2.1:7956968-7956987 None:intergenic 35.0%
!! ATTTATCTGTTAGGCACTGA+AGG + chr2.1:7956046-7956065 MS.gene028655:intron 35.0%
!! CTTCAAATTAAAAGGGTGTC+TGG + chr2.1:7956801-7956820 MS.gene028655:intron 35.0%
!! TAAAGGAAGCTTTAGGTGTT+GGG + chr2.1:7956340-7956359 MS.gene028655:CDS 35.0%
!! TGTTGGTGTTTTGTAGCTAT+TGG + chr2.1:7956860-7956879 MS.gene028655:intron 35.0%
AACCAGAGTCATCAAAACCA+GGG - chr2.1:7954524-7954543 None:intergenic 40.0%
AAGAACTTGGTCATCATGCA+GGG + chr2.1:7954553-7954572 MS.gene028655:CDS 40.0%
AATATCACTGTGAACATCGG+TGG - chr2.1:7955207-7955226 None:intergenic 40.0%
ACAAGAACTTGTCCCTTGTT+TGG + chr2.1:7955010-7955029 MS.gene028655:CDS 40.0%
ACAGCATACATTAGTGTTGC+CGG - chr2.1:7956137-7956156 None:intergenic 40.0%
AGTCCTCTTATGAGAGTTGA+AGG - chr2.1:7954414-7954433 None:intergenic 40.0%
ATAGCTGAAACCTGATCCAA+TGG - chr2.1:7955183-7955202 None:intergenic 40.0%
ATCAAGTTACTTGTGTACGC+CGG + chr2.1:7956465-7956484 MS.gene028655:CDS 40.0%
ATTTGGTAGGGAATTCAAGG+TGG + chr2.1:7956591-7956610 MS.gene028655:intron 40.0%
CAAGGAAACAAAGCAAACGA+AGG + chr2.1:7955617-7955636 MS.gene028655:CDS 40.0%
CAGTTAACCATATGACGACA+GGG - chr2.1:7954924-7954943 None:intergenic 40.0%
CGATTTGTATGACTTCTTGC+AGG + chr2.1:7955253-7955272 MS.gene028655:CDS 40.0%
CTCATTTGGTAGGGAATTCA+AGG + chr2.1:7956588-7956607 MS.gene028655:intron 40.0%
GAATGAATATGGATGGGACA+AGG + chr2.1:7955032-7955051 MS.gene028655:CDS 40.0%
GCGAATATCACTGTGAACAT+CGG - chr2.1:7955210-7955229 None:intergenic 40.0%
GTCAGGTCAGACAACATTTA+AGG + chr2.1:7956631-7956650 MS.gene028655:CDS 40.0%
GTCCTCTTATGAGAGTTGAA+GGG - chr2.1:7954413-7954432 None:intergenic 40.0%
TAACCAGAGTCATCAAAACC+AGG - chr2.1:7954525-7954544 None:intergenic 40.0%
TAGCTGAAACCTGATCCAAT+GGG - chr2.1:7955182-7955201 None:intergenic 40.0%
TCCTCTTATGAGAGTTGAAG+GGG - chr2.1:7954412-7954431 None:intergenic 40.0%
TCTTCTCCACAATGTTTCCA+TGG - chr2.1:7954491-7954510 None:intergenic 40.0%
TGCCAATACTGTCTTCATCA+CGG - chr2.1:7955232-7955251 None:intergenic 40.0%
TTTGGTAGGGAATTCAAGGT+GGG + chr2.1:7956592-7956611 MS.gene028655:intron 40.0%
! TGGTCCTTTTCAGTTCTCAA+AGG + chr2.1:7954987-7955006 MS.gene028655:CDS 40.0%
! TTTGGGATGCAGTTGAAGAA+AGG - chr2.1:7954358-7954377 None:intergenic 40.0%
!! AAAGGAAGCTTTAGGTGTTG+GGG + chr2.1:7956341-7956360 MS.gene028655:CDS 40.0%
!! CTTCGTTTGCTTTGTTTCCT+TGG - chr2.1:7955619-7955638 None:intergenic 40.0%
!! GCAACTTTTGGTTGATCCAT+AGG - chr2.1:7956956-7956975 None:intergenic 40.0%
!! GTAAAGGAAGCTTTAGGTGT+TGG + chr2.1:7956339-7956358 MS.gene028655:CDS 40.0%
!! TTGGTTGATAGTGAAGAAGC+AGG + chr2.1:7956674-7956693 MS.gene028655:CDS 40.0%
AAGGGGATGCAGTTGAAGAA+AGG - chr2.1:7954395-7954414 None:intergenic 45.0%
AATGATCCTCATGTCCTCCA+TGG + chr2.1:7954471-7954490 MS.gene028655:CDS 45.0%
AGGACATGAGGATCATTCTC+TGG - chr2.1:7954468-7954487 None:intergenic 45.0%
ATATGGTTAACTGGAGGTCC+AGG + chr2.1:7954931-7954950 MS.gene028655:CDS 45.0%
ATGTTTCCATGGAGGACATG+AGG - chr2.1:7954480-7954499 None:intergenic 45.0%
ATTCCATCCTCAAGAAGAGC+AGG - chr2.1:7956447-7956466 None:intergenic 45.0%
ATTCCTGCTCTTCTTGAGGA+TGG + chr2.1:7956441-7956460 MS.gene028655:CDS 45.0%
CAAACCTTAAGGAAGGCCAA+AGG - chr2.1:7956719-7956738 None:intergenic 45.0%
CCAGTTAACCATATGACGAC+AGG - chr2.1:7954925-7954944 None:intergenic 45.0%
CCTGTCGTCATATGGTTAAC+TGG + chr2.1:7954922-7954941 MS.gene028655:CDS 45.0%
CTAAAGGCGGCAGAAAAATG+TGG + chr2.1:7955911-7955930 MS.gene028655:CDS 45.0%
CTTAGTACACAGTGCCTTGA+CGG + chr2.1:7956389-7956408 MS.gene028655:CDS 45.0%
GAACAATAGGTGAAAGAGGC+TGG + chr2.1:7956920-7956939 MS.gene028655:intron 45.0%
GAAGAACTTGGTCATCATGC+AGG + chr2.1:7954552-7954571 MS.gene028655:CDS 45.0%
GAGAAGAAGTTCACTTTCCC+TGG + chr2.1:7954504-7954523 MS.gene028655:CDS 45.0%
GTCGTCATATGGTTAACTGG+AGG + chr2.1:7954925-7954944 MS.gene028655:CDS 45.0%
GTGTTCGACATATGTGTGTC+TGG + chr2.1:7956823-7956842 MS.gene028655:intron 45.0%
TCCCCTTCAACTCTCATAAG+AGG + chr2.1:7954408-7954427 MS.gene028655:CDS 45.0%
TCTCCACAATGTTTCCATGG+AGG - chr2.1:7954488-7954507 None:intergenic 45.0%
TCTGAAAAGCCATGGACCTT+TGG + chr2.1:7956700-7956719 MS.gene028655:CDS 45.0%
TGAAACCTGATCCAATGGGT+TGG - chr2.1:7955178-7955197 None:intergenic 45.0%
TGTCCTCCATGGAAACATTG+TGG + chr2.1:7954482-7954501 MS.gene028655:CDS 45.0%
TTCCTCATTCCAAAGCTGCT+AGG + chr2.1:7954586-7954605 MS.gene028655:CDS 45.0%
TTTCATCCAATCCTCCGTCA+AGG - chr2.1:7956406-7956425 None:intergenic 45.0%
TTTGTTTCCTTGGTGAACCC+TGG - chr2.1:7955609-7955628 None:intergenic 45.0%
! ACATTCCAGCTTTTGCATCC+AGG + chr2.1:7955588-7955607 MS.gene028655:CDS 45.0%
! CATTCCAGCTTTTGCATCCA+GGG + chr2.1:7955589-7955608 MS.gene028655:CDS 45.0%
! GCAGGAATTCTGAAAAGCCA+TGG + chr2.1:7956692-7956711 MS.gene028655:CDS 45.0%
! TTTTCTGCCGCCTTTAGACA+CGG - chr2.1:7955908-7955927 None:intergenic 45.0%
!! CAGGGCTTTGCTATTGGTAA+TGG + chr2.1:7955779-7955798 MS.gene028655:intron 45.0%
!! TACCTAGCAGCTTTGGAATG+AGG - chr2.1:7954591-7954610 None:intergenic 45.0%
!! TATCTGTTAGGCACTGAAGG+TGG + chr2.1:7956049-7956068 MS.gene028655:intron 45.0%
!!! TTCCCTGGTTTTGATGACTC+TGG + chr2.1:7954519-7954538 MS.gene028655:CDS 45.0%
!!! CAATATATATATTTTTTTTT+TGG + chr2.1:7956898-7956917 MS.gene028655:intron 5.0%
ACTGAAGGTGGACAAGCATG+TGG + chr2.1:7956061-7956080 MS.gene028655:CDS 50.0%
AGGATGACCCTGTCGTCATA+TGG + chr2.1:7954914-7954933 MS.gene028655:CDS 50.0%
ATGTCCAGCGTATGACTCTC+CGG - chr2.1:7955567-7955586 None:intergenic 50.0%
ATTACCGGAGAGTCATACGC+TGG + chr2.1:7955560-7955579 MS.gene028655:CDS 50.0%
CGCCGTGATGAAGACAGTAT+TGG + chr2.1:7955227-7955246 MS.gene028655:CDS 50.0%
CTGAAGGTGGACAAGCATGT+GGG + chr2.1:7956062-7956081 MS.gene028655:CDS 50.0%
GGGAACTTTCGGTGATTGTC+AGG + chr2.1:7956278-7956297 MS.gene028655:CDS 50.0%
GGGTATTCCTGCTCTTCTTG+AGG + chr2.1:7956437-7956456 MS.gene028655:CDS 50.0%
GTAGACCAACCCATTGGATC+AGG + chr2.1:7955170-7955189 MS.gene028655:CDS 50.0%
GTTGATCCCACCGTGTCTAA+AGG + chr2.1:7955895-7955914 MS.gene028655:CDS 50.0%
GTTGATGCCATGAAGTGGTC+AGG + chr2.1:7956614-7956633 MS.gene028655:CDS 50.0%
TAAGGAAGGCCAAAGGTCCA+TGG - chr2.1:7956712-7956731 None:intergenic 50.0%
TGAACCCTGGATGCAAAAGC+TGG - chr2.1:7955596-7955615 None:intergenic 50.0%
TGGTGTACGTGTGTGTCTGT+TGG + chr2.1:7956843-7956862 MS.gene028655:intron 50.0%
TGTCTGACCTGACCACTTCA+TGG - chr2.1:7956624-7956643 None:intergenic 50.0%
TTAACTGGAGGTCCAGGATG+CGG + chr2.1:7954937-7954956 MS.gene028655:CDS 50.0%
TTTGCATCCAGGGTTCACCA+AGG + chr2.1:7955599-7955618 MS.gene028655:CDS 50.0%
! TGGACCTTTGGCCTTCCTTA+AGG + chr2.1:7956712-7956731 MS.gene028655:CDS 50.0%
ACAGTGCCTTGACGGAGGAT+TGG + chr2.1:7956397-7956416 MS.gene028655:CDS 55.0%
AGTACACAGTGCCTTGACGG+AGG + chr2.1:7956392-7956411 MS.gene028655:CDS 55.0%
GATCCCACCGTGTCTAAAGG+CGG + chr2.1:7955898-7955917 MS.gene028655:CDS 55.0%
GCAATTTCACTGCCGCATCC+TGG - chr2.1:7954952-7954971 None:intergenic 55.0%
! GGCTGGTCACATGGTTCCTA+TGG + chr2.1:7956937-7956956 MS.gene028655:CDS 55.0%
! GGTGAAAGAGGCTGGTCACA+TGG + chr2.1:7956928-7956947 MS.gene028655:intron 55.0%
!! GGTGGGTTGATGCCATGAAG+TGG + chr2.1:7956609-7956628 MS.gene028655:CDS 55.0%
CTGCCGCCTTTAGACACGGT+GGG - chr2.1:7955904-7955923 None:intergenic 60.0%
TCTGCCGCCTTTAGACACGG+TGG - chr2.1:7955905-7955924 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 7954270 7957051 7954270 ID=MS.gene028655
chr2.1 mRNA 7954270 7957051 7954270 ID=MS.gene028655.t1;Parent=MS.gene028655
chr2.1 exon 7954270 7954607 7954270 ID=MS.gene028655.t1.exon1;Parent=MS.gene028655.t1
chr2.1 CDS 7954270 7954607 7954270 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7954879 7955053 7954879 ID=MS.gene028655.t1.exon2;Parent=MS.gene028655.t1
chr2.1 CDS 7954879 7955053 7954879 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7955152 7955274 7955152 ID=MS.gene028655.t1.exon3;Parent=MS.gene028655.t1
chr2.1 CDS 7955152 7955274 7955152 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7955515 7955658 7955515 ID=MS.gene028655.t1.exon4;Parent=MS.gene028655.t1
chr2.1 CDS 7955515 7955658 7955515 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7955782 7955932 7955782 ID=MS.gene028655.t1.exon5;Parent=MS.gene028655.t1
chr2.1 CDS 7955782 7955932 7955782 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7956059 7956147 7956059 ID=MS.gene028655.t1.exon6;Parent=MS.gene028655.t1
chr2.1 CDS 7956059 7956147 7956059 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7956252 7956516 7956252 ID=MS.gene028655.t1.exon7;Parent=MS.gene028655.t1
chr2.1 CDS 7956252 7956516 7956252 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7956600 7956733 7956600 ID=MS.gene028655.t1.exon8;Parent=MS.gene028655.t1
chr2.1 CDS 7956600 7956733 7956600 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
chr2.1 exon 7956929 7957051 7956929 ID=MS.gene028655.t1.exon9;Parent=MS.gene028655.t1
chr2.1 CDS 7956929 7957051 7956929 ID=cds.MS.gene028655.t1;Parent=MS.gene028655.t1
Gene Sequence

>MS.gene028655

ATGGCATCATCTTTAAGGTTCCTCAAAGTGTGTCTGTCTTTTAAAATGTTGTTGCACTTCCTCTTCTTCATTTCACCTTCATTCTCCTTTCTTCAACTGCATCCCAAAAACAATGACATACTCCTTTCTTCAACTGCATCCCCTTCAACTCTCATAAGAGGACTTGACCTTTTTCCTAAAAGTTCCATAAACATACCAGAGAATGATCCTCATGTCCTCCATGGAAACATTGTGGAGAAGAAGTTCACTTTCCCTGGTTTTGATGACTCTGGTTATTCTGTTGAAGAACTTGGTCATCATGCAGGGTATTATAGTCTTCCTCATTCCAAAGCTGCTAGGTAAATGTTTTATGTCGTGTGTGTGCGCGCGCGCTTTTTTATGTATTTTCTACCCATTTTTCTTTTATAAAGTTCGAAGATTATTAATAAATTCCTCTAAAAAAAGGTTATTAATAAATGTTTTTTATTTTTAAAAGTGGACAGACGGACACTAATATGCTTTTCTGTATGTTATTTAGATTAAGTGAGGATTAGTACTCATCTATCCACACATCATAATAATGTGTGCATGGATATATTTCCATTGAACAATTTGTTATGTCAATTGCAGGATGTTCTATTTTTTCTTTGAATCTCGAAACAGTAAGGATGACCCTGTCGTCATATGGTTAACTGGAGGTCCAGGATGCGGCAGTGAAATTGCCTTGTTTTATGAAAATGGTCCTTTTCAGTTCTCAAAGGACAAGAACTTGTCCCTTGTTTGGAATGAATATGGATGGGACAAGGTAACAGCTATTCATTCTTCCCTTTTCTTTTTTCCACTTTAGTTCTAACTGATACATAATCATATTGCATCATATACTTTTTTCTTTCTCTTTTGTAGGCATCAAATATTATATTTGTAGACCAACCCATTGGATCAGGTTTCAGCTATACCACCGATGTTCACAGTGATATTCGCCGTGATGAAGACAGTATTGGCAACGATTTGTATGACTTCTTGCAGGTAACTTGATTTGTTCAGTACTTTATTAATTGATTAATCACTTGAATTAAGTGGTTAAATGACTTTTTTTTTACGAGAAATTAAGTGGTTAAACTTGATTCATCGTTAGTTAGTACTTATATTTAATTTTAAAATTCAAAGACGACATTACATACTATCTATTGGTTCTAAACTACAAATTTTATGTTAAACTATGATATTGTGCAAACATAAGATCAACTTAAATTTTTACAATGACAGGCATTTTTCAAGGAACACCCTCAGTTCACAAAGAATGATTTTTATATTACCGGAGAGTCATACGCTGGACATTACATTCCAGCTTTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAACGAAGGAATTCATATAAATCTAAAGGTATTATTATTACATTGTCATATAATATAACTGTGTATTCATACAAAGGTAAACTTTATATCAAAGTAATGCAAACTAATCACATTGAGTGTATTAACTCCTTTCATCTTTTATAATAAACAGGGCTTTGCTATTGGTAATGGATTAACCAATCCTGAAATTCAGTACATGGCATATACAGATTATGCATTAGACAATGGACTGATTAATAAGGATGAATATGAAAGAATCAACAAGTTGATCCCACCGTGTCTAAAGGCGGCAGAAAAATGTGGTATAACATTGAGCTTTTTTCTCTTTCTCAGTCACAAATCACTTAGCACCAAGAGAGAATTTTACTAATTTATTGTGCAAGTCATGTGTTATTTTTCCTTATTGACACTCTTAATTTATCTGTTAGGCACTGAAGGTGGACAAGCATGTGGGACTGCATTAACTACTTGTAAGAAAATATTCTATCAGATCACAAACATCACCGGCAACACTAATGTATGCTGTCAAAAAATAAAAGTAGCACTAAAAGTATAAGATAAAGATTGTATGAAAATAATGAAGTTTGAATACACTAATGCATTATGTTATTCGAACTGCAGTACTACGACATTAGAAAGAAATGTGAGGGAACTTTCGGTGATTGTCAGGACTTCTCTGACATAGAGACATTCTTGAACATGAAGACAGTAAAGGAAGCTTTAGGTGTTGGGGACTTGAAATTTGATTCTTGCAGTTACTTAGTACACAGTGCCTTGACGGAGGATTGGATGAAAAATCATGAAGTGGGTATTCCTGCTCTTCTTGAGGATGGAATCAAGTTACTTGTGTACGCCGGAGAAAAAGATCTAATATGCAATTGGCTTGGTAAGCTCAATTAATTTTTCCAATCTTAAACAAGATACAAATTAGTTAGTTATAGAACTCTAAATGTGCTTCTCATTTGGTAGGGAATTCAAGGTGGGTTGATGCCATGAAGTGGTCAGGTCAGACAACATTTAAGGAGTCTCCTACAACTTCATTTTTGGTTGATAGTGAAGAAGCAGGAATTCTGAAAAGCCATGGACCTTTGGCCTTCCTTAAGGTTTGTGTTTAAGGATGTATTCATGAGCATAAGAGGCTACTGATCTACATAGTACAGACTACAGACACTTCAAATTAAAAGGGTGTCTGGTGTTCGACATATGTGTGTCTGGTGTACGTGTGTGTCTGTTGGTGTTTTGTAGCTATTGGTTCGCTTGTATTTAACAATATATATATTTTTTTTTTGGAACAATAGGTGAAAGAGGCTGGTCACATGGTTCCTATGGATCAACCAAAAGTTGCACTTCAGATGTTACAAGATTGGATGCAAGGGAAACTGCACTCAGCACAAAACCAAAATCACTTTCTTGTTGTATAA
Protein sequence

>MS.gene028655.t1

MASSLRFLKVCLSFKMLLHFLFFISPSFSFLQLHPKNNDILLSSTASPSTLIRGLDLFPKSSINIPENDPHVLHGNIVEKKFTFPGFDDSGYSVEELGHHAGYYSLPHSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSEIALFYENGPFQFSKDKNLSLVWNEYGWDKASNIIFVDQPIGSGFSYTTDVHSDIRRDEDSIGNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPAFASRVHQGNKANEGIHINLKGFAIGNGLTNPEIQYMAYTDYALDNGLINKDEYERINKLIPPCLKAAEKCGTEGGQACGTALTTCKKIFYQITNITGNTNYYDIRKKCEGTFGDCQDFSDIETFLNMKTVKEALGVGDLKFDSCSYLVHSALTEDWMKNHEVGIPALLEDGIKLLVYAGEKDLICNWLGNSRWVDAMKWSGQTTFKESPTTSFLVDSEEAGILKSHGPLAFLKVKEAGHMVPMDQPKVALQMLQDWMQGKLHSAQNQNHFLVV