AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020168.t1 MTR_8g011350 98.182 495 9 0 1 495 1 495 0.0 1007
MS.gene020168.t1 MTR_8g011350 98.291 468 8 0 1 468 1 468 0.0 953
MS.gene020168.t1 MTR_7g051430 68.367 490 152 2 8 495 7 495 0.0 728
MS.gene020168.t1 MTR_7g080180 63.253 498 169 6 8 495 5 498 0.0 667
MS.gene020168.t1 MTR_7g080180 62.500 456 157 6 8 453 5 456 0.0 602
MS.gene020168.t1 MTR_7g051430 67.482 409 130 2 8 414 7 414 0.0 592
MS.gene020168.t1 MTR_4g021520 41.667 468 233 10 31 495 40 470 3.05e-120 361
MS.gene020168.t1 MTR_2g018630 38.166 469 250 7 29 495 35 465 4.79e-119 357
MS.gene020168.t1 MTR_4g021510 39.723 506 257 13 1 495 1 469 7.68e-118 355
MS.gene020168.t1 MTR_4g021535 39.315 496 256 12 3 495 13 466 3.14e-117 353
MS.gene020168.t1 MTR_3g100420 39.800 500 260 9 8 495 26 496 3.73e-117 353
MS.gene020168.t1 MTR_2g018590 38.477 499 265 10 1 491 1 465 9.14e-117 352
MS.gene020168.t1 MTR_4g021490 39.744 468 242 11 31 495 40 470 1.23e-113 344
MS.gene020168.t1 MTR_4g021500 40.171 468 240 10 31 495 40 470 2.50e-111 350
MS.gene020168.t1 MTR_4g021500 35.818 483 247 10 16 495 465 887 4.24e-95 307
MS.gene020168.t1 MTR_4g021530 37.576 495 265 11 6 495 15 470 3.07e-111 338
MS.gene020168.t1 MTR_4g021500 40.171 468 240 10 31 495 40 470 3.22e-111 350
MS.gene020168.t1 MTR_4g021500 36.907 485 257 10 16 495 465 905 9.74e-102 325
MS.gene020168.t1 MTR_2g018600 38.217 471 246 9 29 491 32 465 6.06e-111 337
MS.gene020168.t1 MTR_4g021520 41.549 426 209 10 31 453 40 428 3.11e-103 316
MS.gene020168.t1 MTR_4g021535 35.628 494 226 13 5 495 15 419 2.80e-93 290
MS.gene020168.t1 MTR_2g018630 36.272 397 213 7 101 495 2 360 7.29e-92 284
MS.gene020168.t1 MTR_2g062990 34.615 494 270 11 4 492 13 458 4.02e-90 283
MS.gene020168.t1 MTR_2g062980 35.282 496 264 12 4 492 13 458 2.79e-89 281
MS.gene020168.t1 MTR_3g045770 33.130 492 271 9 9 491 8 450 2.61e-88 278
MS.gene020168.t1 MTR_2g063000 34.949 495 264 13 8 492 13 459 4.34e-88 278
MS.gene020168.t1 MTR_4g075150 36.162 495 263 17 5 491 9 458 1.21e-87 277
MS.gene020168.t1 MTR_4g075150 35.960 495 262 17 5 491 9 456 5.23e-87 275
MS.gene020168.t1 MTR_2g081620 33.063 493 277 9 5 492 15 459 6.62e-86 272
MS.gene020168.t1 MTR_0003s0560 34.461 473 250 10 27 495 70 486 4.28e-83 266
MS.gene020168.t1 MTR_2g009200 31.697 489 265 10 16 495 11 439 6.14e-81 258
MS.gene020168.t1 MTR_7g013790 32.186 494 279 14 15 495 13 463 9.88e-80 256
MS.gene020168.t1 MTR_4g122950 31.474 502 296 13 5 492 6 473 3.74e-79 255
MS.gene020168.t1 MTR_3g034290 32.839 472 261 10 27 495 71 489 4.92e-79 255
MS.gene020168.t1 MTR_1g095560 35.052 485 251 14 17 490 19 450 1.32e-78 253
MS.gene020168.t1 MTR_1g020090 35.669 471 235 14 27 492 86 493 2.39e-77 251
MS.gene020168.t1 MTR_4g122960 32.072 502 291 14 5 492 6 471 1.39e-75 246
MS.gene020168.t1 MTR_1g021010 34.979 466 240 11 31 492 76 482 6.69e-75 244
MS.gene020168.t1 MTR_1g095540 31.919 495 279 11 6 490 4 450 6.98e-75 243
MS.gene020168.t1 MTR_2g012850 33.600 500 274 16 7 492 6 461 1.16e-74 243
MS.gene020168.t1 MTR_5g072570 31.992 497 276 12 10 492 9 457 1.88e-74 243
MS.gene020168.t1 MTR_3g079590 33.476 466 251 10 31 493 78 487 1.93e-74 243
MS.gene020168.t1 MTR_3g079570 33.691 466 249 9 31 493 79 487 2.08e-74 243
MS.gene020168.t1 MTR_4g089155 33.758 471 262 12 30 492 53 481 1.27e-73 241
MS.gene020168.t1 MTR_3g090130 32.323 495 271 14 11 492 9 452 2.42e-73 239
MS.gene020168.t1 MTR_2g449850 32.636 478 265 13 23 492 30 458 1.18e-72 238
MS.gene020168.t1 MTR_2g012860 34.255 470 261 14 30 492 41 469 1.26e-72 238
MS.gene020168.t1 MTR_1g095560 32.882 517 251 15 17 490 19 482 5.93e-72 236
MS.gene020168.t1 MTR_3g434850 33.002 503 258 18 9 492 8 450 1.58e-71 234
MS.gene020168.t1 MTR_3g079560 33.262 466 250 9 31 492 78 486 3.86e-71 234
MS.gene020168.t1 MTR_3g079600 33.824 476 237 12 31 492 76 487 9.44e-71 234
MS.gene020168.t1 MTR_1g021020 32.298 483 261 12 15 492 62 483 1.90e-70 233
MS.gene020168.t1 MTR_3g498755 33.197 488 245 15 31 495 15 444 1.99e-70 231
MS.gene020168.t1 MTR_3g079620 33.265 487 251 12 23 492 65 494 7.13e-70 231
MS.gene020168.t1 MTR_2g063000 31.034 493 255 13 8 492 13 428 6.59e-69 227
MS.gene020168.t1 MTR_3g090150 31.950 482 262 16 26 492 29 459 9.40e-68 225
MS.gene020168.t1 MTR_3g079630 32.495 477 249 11 31 493 78 495 1.01e-67 226
MS.gene020168.t1 MTR_8g099930 32.079 505 274 18 7 495 10 461 1.88e-63 213
MS.gene020168.t1 MTR_7g021130 30.906 508 267 19 8 495 13 456 2.17e-59 202
MS.gene020168.t1 MTR_3g034290 31.202 391 213 10 27 414 71 408 2.72e-55 190
MS.gene020168.t1 MTR_0003s0560 38.846 260 149 6 27 284 70 321 5.29e-54 185
MS.gene020168.t1 MTR_1g102130 29.565 460 242 14 44 495 104 489 3.95e-52 184
MS.gene020168.t1 MTR_1g094155 28.233 464 250 13 45 492 90 486 9.17e-49 175
MS.gene020168.t1 MTR_2g095750 28.200 461 255 12 45 492 100 497 2.96e-48 174
MS.gene020168.t1 MTR_1g040370 40.239 251 134 7 3 250 2 239 1.57e-47 170
MS.gene020168.t1 MTR_1g040370 32.164 171 107 3 328 492 244 411 7.29e-21 95.1
MS.gene020168.t1 MTR_4g057585 28.477 453 263 11 45 492 96 492 1.68e-47 171
MS.gene020168.t1 MTR_4g057595 28.761 452 263 10 45 492 97 493 8.07e-47 170
MS.gene020168.t1 MTR_2g095730 27.197 478 265 12 35 492 80 494 3.74e-44 162
MS.gene020168.t1 MTR_1g050545 42.564 195 106 2 45 239 83 271 1.67e-41 155
MS.gene020168.t1 MTR_4g057600 39.216 204 118 2 45 248 95 292 5.87e-40 151
MS.gene020168.t1 MTR_4g057570 34.520 281 158 6 38 298 82 356 9.24e-40 150
MS.gene020168.t1 MTR_5g097180 24.593 492 287 19 1 479 1 421 1.03e-31 127
MS.gene020168.t1 MTR_2g095710 33.074 257 137 9 45 285 94 331 6.52e-28 116
MS.gene020168.t1 MTR_4g084710 34.054 185 108 6 41 220 41 216 9.69e-25 107
MS.gene020168.t1 MTR_0075s0010 51.818 110 38 5 44 146 20 121 1.64e-23 101
MS.gene020168.t1 MTR_4g056520 23.356 441 273 13 63 485 55 448 3.28e-22 99.8
MS.gene020168.t1 MTR_6g452520 75.439 57 13 1 439 495 133 188 3.12e-21 91.7
MS.gene020168.t1 MTR_6g452510 75.439 57 13 1 439 495 133 188 3.12e-21 91.7
MS.gene020168.t1 MTR_2g018650 39.806 103 59 1 356 458 22 121 1.12e-20 87.8
MS.gene020168.t1 MTR_0024s0320 88.095 42 5 0 441 482 72 113 5.65e-18 81.6
MS.gene020168.t1 MTR_0024s0320 82.857 35 6 0 211 245 39 73 3.62e-12 65.1
MS.gene020168.t1 MTR_1g051175 40.171 117 57 5 44 158 25 130 1.59e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020168.t1 AT4G12910 66.935 496 157 2 5 495 4 497 0.0 711
MS.gene020168.t1 AT3G25420 64.358 491 165 4 11 495 8 494 0.0 670
MS.gene020168.t1 AT4G12910 65.419 454 150 2 5 453 4 455 0.0 640
MS.gene020168.t1 AT3G12203 38.604 487 236 7 12 495 11 437 6.15e-116 348
MS.gene020168.t1 AT3G12203 39.570 465 218 7 34 495 12 416 8.27e-115 345
MS.gene020168.t1 AT1G33540 37.740 469 261 8 28 495 26 464 3.16e-113 343
MS.gene020168.t1 AT5G09640 37.022 497 276 10 3 495 2 465 6.92e-112 339
MS.gene020168.t1 AT1G73300 38.758 467 230 7 29 495 31 441 7.96e-112 338
MS.gene020168.t1 AT1G73300 38.758 467 230 7 29 495 31 441 7.96e-112 338
MS.gene020168.t1 AT1G73280 37.247 494 254 6 2 495 4 441 1.62e-111 337
MS.gene020168.t1 AT2G22920 38.217 471 223 8 29 492 23 432 7.74e-110 333
MS.gene020168.t1 AT3G10450 38.889 468 230 8 28 495 26 437 9.59e-110 333
MS.gene020168.t1 AT2G23000 37.607 468 240 7 28 495 22 437 2.59e-109 332
MS.gene020168.t1 AT2G23000 37.607 468 240 7 28 495 22 437 2.59e-109 332
MS.gene020168.t1 AT3G12203 39.863 439 201 7 60 495 1 379 1.07e-108 328
MS.gene020168.t1 AT3G12240 36.943 471 241 6 25 495 22 436 1.40e-108 330
MS.gene020168.t1 AT1G73290 37.393 468 235 6 28 495 29 438 1.69e-108 330
MS.gene020168.t1 AT1G33540 38.170 448 246 8 49 495 4 421 2.90e-108 328
MS.gene020168.t1 AT3G12220 37.844 473 234 6 22 492 18 432 2.97e-107 326
MS.gene020168.t1 AT5G36180 37.901 467 234 7 29 495 31 441 5.22e-107 326
MS.gene020168.t1 AT1G73310 36.998 473 230 6 29 495 31 441 4.82e-106 323
MS.gene020168.t1 AT1G73270 37.554 466 231 5 29 492 31 438 5.01e-105 321
MS.gene020168.t1 AT1G73270 37.554 466 231 5 29 492 31 438 6.16e-105 321
MS.gene020168.t1 AT3G10450 38.170 448 219 7 49 495 4 394 1.30e-103 315
MS.gene020168.t1 AT2G23010 35.787 489 259 9 10 495 1 437 2.46e-102 314
MS.gene020168.t1 AT2G22980 36.688 477 230 10 25 495 20 430 5.90e-102 312
MS.gene020168.t1 AT2G23010 35.583 489 260 9 10 495 1 437 7.62e-102 312
MS.gene020168.t1 AT3G12220 38.117 446 216 6 49 492 15 402 3.15e-101 310
MS.gene020168.t1 AT3G12230 35.924 476 245 8 22 495 18 435 7.68e-101 310
MS.gene020168.t1 AT3G10450 38.149 443 219 7 28 470 26 413 1.28e-99 306
MS.gene020168.t1 AT2G22970 36.229 472 235 11 29 495 23 433 5.43e-99 305
MS.gene020168.t1 AT1G73290 37.002 427 212 5 28 454 29 398 4.61e-96 296
MS.gene020168.t1 AT2G22920 37.644 433 203 7 29 454 23 395 6.16e-96 296
MS.gene020168.t1 AT1G73310 36.782 435 208 5 28 456 30 403 2.45e-94 293
MS.gene020168.t1 AT3G10450 38.152 422 206 7 49 470 4 370 2.50e-93 288
MS.gene020168.t1 AT2G22980 36.062 452 218 9 25 470 20 406 2.83e-93 290
MS.gene020168.t1 AT2G22980 36.142 451 217 9 25 469 20 405 1.30e-92 288
MS.gene020168.t1 AT2G22970 35.714 448 223 10 29 471 23 410 1.90e-90 283
MS.gene020168.t1 AT2G22970 35.570 447 223 10 29 470 23 409 3.56e-90 281
MS.gene020168.t1 AT5G23210 37.553 474 264 17 23 491 44 490 2.11e-89 282
MS.gene020168.t1 AT4G30810 32.742 507 283 10 1 495 1 461 8.42e-89 280
MS.gene020168.t1 AT4G15100 35.417 480 263 14 25 495 39 480 1.04e-85 272
MS.gene020168.t1 AT1G73280 37.629 388 186 6 108 495 8 339 6.08e-84 263
MS.gene020168.t1 AT2G35780 34.664 476 253 10 27 495 26 450 1.32e-82 263
MS.gene020168.t1 AT3G52000 32.075 477 264 8 24 495 57 478 5.73e-81 260
MS.gene020168.t1 AT3G52020 32.983 476 258 12 27 495 76 497 7.05e-80 258
MS.gene020168.t1 AT5G36180 37.113 388 188 7 108 495 8 339 1.03e-79 252
MS.gene020168.t1 AT5G36180 37.113 388 188 7 108 495 8 339 1.03e-79 252
MS.gene020168.t1 AT4G30610 32.558 473 269 13 27 492 29 458 3.32e-79 255
MS.gene020168.t1 AT1G11080 33.527 516 284 16 1 494 9 487 5.97e-79 255
MS.gene020168.t1 AT1G61130 34.122 507 265 17 5 494 4 458 6.69e-79 254
MS.gene020168.t1 AT1G11080 33.527 516 284 16 1 494 9 487 7.98e-79 254
MS.gene020168.t1 AT3G07990 32.839 472 261 11 31 495 34 456 3.85e-77 249
MS.gene020168.t1 AT2G24010 33.264 478 258 13 23 492 23 447 1.66e-76 247
MS.gene020168.t1 AT1G73280 36.486 370 179 6 126 495 1 314 4.70e-76 242
MS.gene020168.t1 AT3G02110 32.278 474 279 13 27 495 34 470 7.86e-76 246
MS.gene020168.t1 AT5G23210 36.406 434 245 16 23 451 44 451 9.35e-76 246
MS.gene020168.t1 AT3G63470 32.203 472 258 11 30 495 81 496 1.17e-75 246
MS.gene020168.t1 AT2G05850 32.577 485 258 12 23 495 56 483 1.64e-75 246
MS.gene020168.t1 AT3G17180 33.479 457 257 13 45 492 53 471 6.72e-75 244
MS.gene020168.t1 AT1G73280 34.625 413 215 5 2 414 4 361 8.72e-75 241
MS.gene020168.t1 AT3G52010 31.612 484 263 11 23 495 57 483 3.39e-74 242
MS.gene020168.t1 AT2G22920 42.806 278 151 3 29 301 23 297 2.47e-72 232
MS.gene020168.t1 AT1G43780 32.848 481 262 13 26 492 33 466 2.77e-72 237
MS.gene020168.t1 AT5G42240 32.842 475 269 10 26 492 28 460 5.37e-72 236
MS.gene020168.t1 AT2G24000 31.360 456 263 11 45 492 44 457 7.98e-72 236
MS.gene020168.t1 AT5G08260 33.958 480 266 14 27 495 36 475 1.07e-71 236
MS.gene020168.t1 AT5G36180 36.364 363 176 6 108 470 8 315 1.23e-71 231
MS.gene020168.t1 AT2G24010 32.720 489 253 15 27 492 27 462 1.44e-71 235
MS.gene020168.t1 AT2G35770 32.072 502 274 15 3 491 6 453 7.54e-71 233
MS.gene020168.t1 AT5G23210 36.211 417 235 16 80 491 5 395 2.10e-69 227
MS.gene020168.t1 AT1G73290 40.856 257 152 0 28 284 29 285 5.08e-69 223
MS.gene020168.t1 AT2G12480 29.860 499 293 10 2 492 4 453 5.76e-69 228
MS.gene020168.t1 AT5G23210 36.165 412 232 16 84 490 8 393 3.43e-68 224
MS.gene020168.t1 AT1G73310 35.574 357 163 5 108 458 8 303 4.32e-68 221
MS.gene020168.t1 AT5G42230 31.601 481 267 12 26 492 24 456 5.09e-68 226
MS.gene020168.t1 AT5G42230 31.601 481 267 12 26 492 24 456 5.09e-68 226
MS.gene020168.t1 AT2G22990 41.699 259 148 2 28 284 20 277 5.51e-68 224
MS.gene020168.t1 AT2G22990 47.748 111 57 1 359 469 299 408 1.49e-29 120
MS.gene020168.t1 AT2G33530 32.577 485 250 17 31 495 34 461 6.32e-68 225
MS.gene020168.t1 AT2G22990 41.699 259 148 2 28 284 20 277 9.39e-68 224
MS.gene020168.t1 AT2G22990 46.957 115 60 1 359 473 299 412 1.09e-29 121
MS.gene020168.t1 AT2G22990 41.699 259 148 2 28 284 20 277 1.29e-67 224
MS.gene020168.t1 AT2G22990 46.715 137 71 2 359 495 299 433 4.23e-38 144
MS.gene020168.t1 AT2G22970 42.529 261 141 4 29 284 23 279 1.75e-66 217
MS.gene020168.t1 AT2G24010 31.115 511 251 16 30 492 1 458 4.07e-66 221
MS.gene020168.t1 AT1G28110 32.371 485 249 16 31 495 32 457 1.53e-65 219
MS.gene020168.t1 AT1G28110 32.371 485 249 16 31 495 32 457 1.53e-65 219
MS.gene020168.t1 AT3G12220 46.188 223 120 0 22 244 18 240 1.63e-65 216
MS.gene020168.t1 AT3G12220 46.617 133 69 2 360 492 250 380 3.43e-35 135
MS.gene020168.t1 AT5G36180 35.838 346 167 6 108 453 8 298 5.62e-65 214
MS.gene020168.t1 AT2G22980 33.668 398 191 10 25 414 20 352 1.22e-63 211
MS.gene020168.t1 AT2G22990 40.154 259 143 3 28 284 20 268 2.72e-61 207
MS.gene020168.t1 AT2G22990 45.985 137 72 2 359 495 290 424 1.53e-37 143
MS.gene020168.t1 AT3G17180 31.829 421 240 13 45 456 53 435 1.56e-60 205
MS.gene020168.t1 AT2G22980 33.898 354 163 9 123 470 1 289 2.57e-60 200
MS.gene020168.t1 AT2G12480 29.615 493 278 14 2 492 4 429 2.54e-57 197
MS.gene020168.t1 AT2G12480 29.615 493 276 14 2 492 4 427 3.05e-57 196
MS.gene020168.t1 AT2G12480 29.757 494 275 15 2 492 4 428 1.33e-56 195
MS.gene020168.t1 AT5G23210 34.584 373 214 15 84 451 8 355 1.24e-54 187
MS.gene020168.t1 AT3G45010 27.815 453 267 9 45 492 101 498 1.73e-51 183
MS.gene020168.t1 AT2G22920 32.903 310 144 8 188 492 3 253 4.51e-51 174
MS.gene020168.t1 AT3G10410 27.195 467 246 12 45 490 99 492 5.03e-49 176
MS.gene020168.t1 AT2G24010 30.392 408 209 14 30 414 1 356 9.55e-48 169
MS.gene020168.t1 AT3G56540 48.087 183 86 4 7 188 58 232 1.78e-46 162
MS.gene020168.t1 AT5G22980 38.976 254 135 5 45 285 98 344 1.61e-45 166
MS.gene020168.t1 AT2G22960 46.429 140 73 2 356 495 47 184 2.05e-40 144
MS.gene020168.t1 AT2G22990 46.715 137 71 2 359 495 185 319 4.31e-39 144
MS.gene020168.t1 AT2G22990 40.854 164 94 2 123 284 1 163 1.78e-36 137
MS.gene020168.t1 AT2G22990 45.985 137 72 2 359 495 185 319 1.41e-38 143
MS.gene020168.t1 AT2G22990 40.854 164 94 2 123 284 1 163 1.41e-36 137
MS.gene020168.t1 AT1G15000 36.364 187 100 6 40 220 32 205 4.44e-30 122
MS.gene020168.t1 AT2G24000 25.879 313 190 7 185 492 119 394 4.15e-29 119
MS.gene020168.t1 AT2G24000 47.436 78 34 3 45 120 44 116 1.36e-12 69.7
MS.gene020168.t1 AT5G22960 30.288 208 108 3 3 210 4 174 1.49e-22 95.5
MS.gene020168.t1 AT2G27920 33.544 158 87 8 63 216 56 199 8.48e-13 70.9

Find 128 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTGGTTCTTTGGCTTAA+TGG 0.092309 8.4:+77560561 MS.gene020168:CDS
CTGTGGATCCAGTGGTTCTT+TGG 0.150186 8.4:+77560553 MS.gene020168:CDS
GCCTCTTGTGGTTTGTATTC+TGG 0.158511 8.4:-77565287 None:intergenic
GGTTTCCAGTATTATATATT+TGG 0.168435 8.4:+77562096 MS.gene020168:intron
GCACACAATACATACCTTTA+TGG 0.240803 8.4:-77564909 None:intergenic
CCTGGGTGTTCTAGCTTTGA+TGG 0.249536 8.4:+77560588 MS.gene020168:CDS
TCCAACCCTTTCTTCATTGC+TGG 0.267173 8.4:+77562337 MS.gene020168:CDS
TGTGTTACAATGGCAGTTTC+AGG 0.274630 8.4:-77560267 None:intergenic
CATGCTTGACTCCCCGTAAA+TGG 0.276759 8.4:-77563962 None:intergenic
AGATTATCACATCCTATATT+AGG 0.278941 8.4:+77563046 MS.gene020168:CDS
CATACCTTGGTCCAGCTATA+TGG 0.285880 8.4:-77561686 None:intergenic
CTTTGGCTTAATGGTGGACC+TGG 0.299794 8.4:+77560570 MS.gene020168:CDS
CATCCCTCACAGGTGCTCTA+AGG 0.312366 8.4:-77563149 None:intergenic
TCTACCTTTCATTACTTCAT+AGG 0.318358 8.4:-77562395 None:intergenic
TGACATGTGTGTTCCATTTA+CGG 0.318463 8.4:+77563949 MS.gene020168:CDS
CCATCTAGTTTCCGTGAGTT+AGG 0.344991 8.4:+77563072 MS.gene020168:CDS
CAAGCATGGACGAGATCAAT+TGG 0.374447 8.4:+77563977 MS.gene020168:CDS
TACACATGCCTTTCTCCTTA+AGG 0.383386 8.4:+77562198 MS.gene020168:CDS
GCCATTGTAACACAGGTTCC+TGG 0.383707 8.4:+77560276 MS.gene020168:CDS
ATCCCTCACAGGTGCTCTAA+GGG 0.386073 8.4:-77563148 None:intergenic
GACATGTGTGTTCCATTTAC+GGG 0.388224 8.4:+77563950 MS.gene020168:CDS
AACAGTTAGCACTGTCTGTT+TGG 0.392419 8.4:+77560200 MS.gene020168:CDS
AATGAAACTGATTACATAAC+CGG 0.400258 8.4:+77562154 MS.gene020168:CDS
CTTAACTACCTTAAGGAGAA+AGG 0.402066 8.4:-77562206 None:intergenic
TTGGACTCTCCTGCTGGTGT+TGG 0.402382 8.4:+77562115 MS.gene020168:CDS
CTCGATATCCTCTGGAAGTT+AGG 0.403731 8.4:-77563621 None:intergenic
TATCCAATGGTCAAGTTGTT+GGG 0.406528 8.4:+77564032 MS.gene020168:CDS
ACACAGGTTCCTGGTTTCAA+TGG 0.407201 8.4:+77560285 MS.gene020168:CDS
ACTAGATGGCAACCTAATAT+AGG 0.416334 8.4:-77563058 None:intergenic
TATCTCAGATGAGTTGTTTG+AGG 0.417000 8.4:+77562688 MS.gene020168:CDS
TGGACTCTCCTGCTGGTGTT+GGG 0.417395 8.4:+77562116 MS.gene020168:CDS
GATATCGAGCTCTTATATTC+AGG 0.418380 8.4:+77563635 MS.gene020168:CDS
AGAAAAGTGTGGTTAGTAGC+TGG 0.420102 8.4:+77563533 MS.gene020168:intron
AGAGTCCAAATATATAATAC+TGG 0.420736 8.4:-77562101 None:intergenic
AGTATCACTGTCTCTCATAT+TGG 0.423629 8.4:-77565344 None:intergenic
AAAACCTTAAAATTCAGTTT+CGG 0.431250 8.4:-77562514 None:intergenic
TGTGTGCAGGGTTACATAGT+TGG 0.437272 8.4:+77562599 MS.gene020168:intron
CCTAACTCACGGAAACTAGA+TGG 0.439956 8.4:-77563072 None:intergenic
ATTGCATTGGTACAGGGAGC+TGG 0.448836 8.4:+77565254 MS.gene020168:intron
ATTTCCTTCGATCATGATGC+TGG 0.449835 8.4:+77563574 MS.gene020168:CDS
CTCTGGAAGTTAGGTTCTTG+TGG 0.457129 8.4:-77563612 None:intergenic
TTATCCAATGGTCAAGTTGT+TGG 0.460263 8.4:+77564031 MS.gene020168:CDS
AGACCCATCCCGTGTACAAA+TGG 0.463037 8.4:-77562665 None:intergenic
GACTCTCCAGCAATGAAGAA+AGG 0.466784 8.4:-77562343 None:intergenic
ATATATTTGGACTCTCCTGC+TGG 0.467242 8.4:+77562109 MS.gene020168:CDS
GTTCCATTTGTACACGGGAT+GGG 0.475564 8.4:+77562662 MS.gene020168:CDS
GATTGAGGTGCAGAGTTGGC+AGG 0.485652 8.4:-77561664 None:intergenic
GGTTGAACAATGAAGAAGTC+AGG 0.487179 8.4:+77563414 MS.gene020168:CDS
TGTTCCATTTGTACACGGGA+TGG 0.487326 8.4:+77562661 MS.gene020168:CDS
AAACGCAGTCTTTATGTCTC+CGG 0.489557 8.4:-77562173 None:intergenic
AAAGAATGTTCGGTCGCGCT+TGG 0.494036 8.4:+77563124 MS.gene020168:CDS
ATACCTTCCAAGCATTATGC+TGG 0.498988 8.4:+77560312 MS.gene020168:CDS
TTTGCTGCTTCAAAATTGAA+AGG 0.501124 8.4:-77561629 None:intergenic
GTTACAGATGAACATATTGA+TGG 0.504938 8.4:+77562629 MS.gene020168:CDS
GAAAAGTGTGGTTAGTAGCT+GGG 0.509237 8.4:+77563534 MS.gene020168:intron
TTTGAAGCAGCAAAGACAAA+GGG 0.512920 8.4:+77561638 MS.gene020168:CDS
ACTCTCCAGCAATGAAGAAA+GGG 0.516463 8.4:-77562342 None:intergenic
TGCACCTCAATCCATATAGC+TGG 0.517012 8.4:+77561675 MS.gene020168:CDS
AGGTTAACCGCGAGTGTGAT+GGG 0.518035 8.4:+77562823 MS.gene020168:CDS
GTGGTTCTTTGGCTTAATGG+TGG 0.518546 8.4:+77560564 MS.gene020168:CDS
TATAAGAGCTCGATATCCTC+TGG 0.519090 8.4:-77563629 None:intergenic
GCCTCTGTGCCGTGATAGCA+TGG 0.522812 8.4:-77563018 None:intergenic
CTCTTGTTCCATTTGTACAC+GGG 0.527491 8.4:+77562657 MS.gene020168:CDS
GGTACAAGATTGTGGATGAA+TGG 0.529639 8.4:+77563999 MS.gene020168:CDS
CAGGGTTACATAGTTGGAAA+TGG 0.529830 8.4:+77562605 MS.gene020168:intron
GAGGTTAACCGCGAGTGTGA+TGG 0.533915 8.4:+77562822 MS.gene020168:CDS
CCTGTGAGGAAAAGAATGTT+CGG 0.536839 8.4:+77563114 MS.gene020168:CDS
AGGAGTTTATGTGCCTACTC+TGG 0.537501 8.4:+77562372 MS.gene020168:CDS
ATACAAACCACAAGAGGCAT+TGG 0.538118 8.4:+77565292 MS.gene020168:CDS
TTTGGCTTAATGGTGGACCT+GGG 0.539326 8.4:+77560571 MS.gene020168:CDS
GTACCCAACAACTTGACCAT+TGG 0.541657 8.4:-77564035 None:intergenic
ATCAATTGGGTACAAGATTG+TGG 0.543917 8.4:+77563991 MS.gene020168:CDS
CAATGAAGAAAGGGTTGGAA+AGG 0.544400 8.4:-77562333 None:intergenic
AAGCATGGACGAGATCAATT+GGG 0.545025 8.4:+77563978 MS.gene020168:CDS
CCATTAAGCCAAAGAACCAC+TGG 0.546695 8.4:-77560561 None:intergenic
GGTACGTTGCCATCCCTCAC+AGG 0.548405 8.4:-77563159 None:intergenic
GCCCCTTAGAGCACCTGTGA+GGG 0.549124 8.4:+77563146 MS.gene020168:CDS
TATGGATTGAGGTGCAGAGT+TGG 0.550426 8.4:-77561668 None:intergenic
TATGAAAACCCAACACCAGC+AGG 0.551489 8.4:-77562124 None:intergenic
ATTTGCTGCAGGTATACTCA+AGG 0.553079 8.4:+77564860 MS.gene020168:intron
TACATACCCAGCATAATGCT+TGG 0.554604 8.4:-77560319 None:intergenic
CATTTACGGGGAGTCAAGCA+TGG 0.554731 8.4:+77563963 MS.gene020168:CDS
AAAGGGTTGGAAAGGAACTC+AGG 0.555213 8.4:-77562325 None:intergenic
ATGGCTCTGTTGCAACTGCA+TGG 0.564716 8.4:+77563393 MS.gene020168:CDS
TCCAGCAATGAAGAAAGGGT+TGG 0.565307 8.4:-77562338 None:intergenic
GTAAAGAAACATACTGTGCA+TGG 0.569087 8.4:-77563216 None:intergenic
TGGTCCAGCTATATGGATTG+AGG 0.571480 8.4:-77561679 None:intergenic
ATTGCTGGAGAGTCATATGC+AGG 0.576335 8.4:+77562352 MS.gene020168:CDS
TTGATAAGTTGTGGCCATGT+TGG 0.577066 8.4:-77563180 None:intergenic
GATGGATTCATATATGAGCA+TGG 0.581015 8.4:+77560606 MS.gene020168:CDS
ATTACTTCATAGGCCAGAGT+AGG 0.581458 8.4:-77562385 None:intergenic
TACCCAGCATAATGCTTGGA+AGG 0.583407 8.4:-77560315 None:intergenic
ATTCTAGAACCATGCTATCA+CGG 0.585085 8.4:+77563009 MS.gene020168:CDS
GGCCCCTTAGAGCACCTGTG+AGG 0.590845 8.4:+77563145 MS.gene020168:CDS
TGGTCAGAAAAGTAAGATTG+TGG 0.590852 8.4:-77564889 None:intergenic
TACCTTCCAAGCATTATGCT+GGG 0.592619 8.4:+77560313 MS.gene020168:CDS
CTGGCCTATGAAGTAATGAA+AGG 0.597221 8.4:+77562391 MS.gene020168:CDS
GCTCTTGTTCCATTTGTACA+CGG 0.597799 8.4:+77562656 MS.gene020168:CDS
CTTAGAGCACCTGTGAGGGA+TGG 0.598548 8.4:+77563150 MS.gene020168:CDS
TCCAGAATACAAACCACAAG+AGG 0.602114 8.4:+77565286 MS.gene020168:CDS
ACCAGGAACCTGTGTTACAA+TGG 0.604228 8.4:-77560277 None:intergenic
GGTATTGTTCCATTGAAACC+AGG 0.615169 8.4:-77560294 None:intergenic
TTGTTGCTATTGATAAGTTG+TGG 0.616997 8.4:-77563189 None:intergenic
TGGAGGCCATGGTTATCCAA+TGG 0.618170 8.4:+77564019 MS.gene020168:CDS
AGAACCACTGGATCCACAGA+AGG 0.624323 8.4:-77560549 None:intergenic
TGAAACTGCCATTGTAACAC+AGG 0.626685 8.4:+77560269 MS.gene020168:CDS
TCTCAGTCTCACCTAACTCA+CGG 0.627803 8.4:-77563083 None:intergenic
GTGACTGTGGATGAAAGTCA+TGG 0.631732 8.4:+77560486 MS.gene020168:CDS
GCTTCCAGCATCATGATCGA+AGG 0.633116 8.4:-77563578 None:intergenic
TAAGCCTTCTGTGGATCCAG+TGG 0.638061 8.4:+77560545 MS.gene020168:CDS
GTCAGAAGGTAAGCCTTCTG+TGG 0.640057 8.4:+77560536 MS.gene020168:CDS
AGAAATTCCCATCACACTCG+CGG 0.644090 8.4:-77562830 None:intergenic
GGGATGGCAACGTACCAACA+TGG 0.645011 8.4:+77563166 MS.gene020168:CDS
TTGTGGATGAATGGAGGCCA+TGG 0.645325 8.4:+77564008 MS.gene020168:CDS
TCCCTCACAGGTGCTCTAAG+GGG 0.647871 8.4:-77563147 None:intergenic
CACAAGAACCTAACTTCCAG+AGG 0.648609 8.4:+77563613 MS.gene020168:CDS
TCTGATGAAACAGAAAAGTG+TGG 0.656210 8.4:+77563522 MS.gene020168:intron
ACAAGATTGTGGATGAATGG+AGG 0.656509 8.4:+77564002 MS.gene020168:CDS
ACTTGACCATTGGATAACCA+TGG 0.663464 8.4:-77564025 None:intergenic
CTGTGGATGAAAGTCATGGA+AGG 0.666630 8.4:+77560490 MS.gene020168:CDS
GAAAGCAATTCACACTGCAG+AGG 0.668971 8.4:+77563436 MS.gene020168:CDS
CTGAGAAACCTCATCCTGTG+AGG 0.670015 8.4:+77563100 MS.gene020168:CDS
ACATGTGTGTTCCATTTACG+GGG 0.672253 8.4:+77563951 MS.gene020168:CDS
AAATTGTCAGCACAATGCTG+AGG 0.690969 8.4:-77560239 None:intergenic
TGAATGAAGGTATGTGACTG+TGG 0.691665 8.4:+77560473 MS.gene020168:intron
CAATCCATATAGCTGGACCA+AGG 0.709270 8.4:+77561682 MS.gene020168:CDS
CCATCAAAGCTAGAACACCC+AGG 0.718686 8.4:-77560588 None:intergenic
ACCATGCTATCACGGCACAG+AGG 0.760501 8.4:+77563017 MS.gene020168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTGAAAATTCATTA+AGG - chr8.4:77564079-77564098 None:intergenic 10.0%
!! GAATAAAAATTACAAAAATT+TGG - chr8.4:77560357-77560376 None:intergenic 10.0%
!!! GTTTTCTTATAATAAATTTT+GGG + chr8.4:77560379-77560398 MS.gene020168:intron 10.0%
!!! TAATCTTTTTTTTTTTGTTT+TGG - chr8.4:77561112-77561131 None:intergenic 10.0%
!!! TAATGAATTTTCAAATATTT+TGG + chr8.4:77564079-77564098 MS.gene020168:intron 10.0%
!!! TGTTTTCTTATAATAAATTT+TGG + chr8.4:77560378-77560397 MS.gene020168:intron 10.0%
!! AAATATAAAGACTTTGAATT+AGG + chr8.4:77564992-77565011 MS.gene020168:intron 15.0%
!! AATAACTAATGAATATGATA+AGG + chr8.4:77564427-77564446 MS.gene020168:intron 15.0%
!! AATTGAATAACAATTTGTAA+TGG - chr8.4:77561574-77561593 None:intergenic 15.0%
!! ATCATATATAAAACATACTT+TGG + chr8.4:77564579-77564598 MS.gene020168:intron 15.0%
!! GTTTATAGATGTAAATTAAA+AGG + chr8.4:77564153-77564172 MS.gene020168:intron 15.0%
!! TTAATGAATCCTAATTAAAT+TGG + chr8.4:77565099-77565118 MS.gene020168:intron 15.0%
!! TTATAAGAAATAAGTGAATT+TGG + chr8.4:77562931-77562950 MS.gene020168:intron 15.0%
!!! AATCTTTTATAATTAAACCA+TGG - chr8.4:77565019-77565038 None:intergenic 15.0%
!!! ACTTTTTTATATACTAATAC+TGG + chr8.4:77565069-77565088 MS.gene020168:intron 15.0%
!!! AGATATTTGATGTTTTTTTA+AGG + chr8.4:77561201-77561220 MS.gene020168:intron 15.0%
!!! ATGTTTTATATATGATTTTC+AGG - chr8.4:77564575-77564594 None:intergenic 15.0%
!!! ATTAATACAACACATTTTAA+TGG - chr8.4:77562430-77562449 None:intergenic 15.0%
!!! ATTTGTTTTCCAATTTAATT+AGG - chr8.4:77565111-77565130 None:intergenic 15.0%
!!! TATTTTTTCTTGTTATCAAA+TGG + chr8.4:77562048-77562067 MS.gene020168:intron 15.0%
!! AAAACCTTAAAATTCAGTTT+CGG - chr8.4:77562517-77562536 None:intergenic 20.0%
!! ACTAGAATTCAAAAACAATT+TGG + chr8.4:77564365-77564384 MS.gene020168:intron 20.0%
!! ATGTTTACAGAAATGATATT+TGG - chr8.4:77564777-77564796 None:intergenic 20.0%
!! ATTTGAACGTGTAAATATTA+TGG + chr8.4:77564626-77564645 MS.gene020168:intron 20.0%
!! CAATATTTATTTGATTGCAT+TGG + chr8.4:77565241-77565260 MS.gene020168:intron 20.0%
!! CAATCAAATAAATATTGTCA+GGG - chr8.4:77565238-77565257 None:intergenic 20.0%
!! CATAAACATCTATCATATAA+GGG - chr8.4:77561966-77561985 None:intergenic 20.0%
!! GAATTCTTAAATAGTATCTT+TGG - chr8.4:77565156-77565175 None:intergenic 20.0%
!! GCTAATAAGTAGATATTAAA+TGG - chr8.4:77563265-77563284 None:intergenic 20.0%
!! TAATAATGTTCCAAAATGAA+AGG - chr8.4:77561266-77561285 None:intergenic 20.0%
!! TAATTAACCATGTATTTGAA+TGG - chr8.4:77564398-77564417 None:intergenic 20.0%
!! TATATAAAACATACTTTGGA+TGG + chr8.4:77564583-77564602 MS.gene020168:intron 20.0%
!! TCATATTTCATACAATCAAT+TGG - chr8.4:77563743-77563762 None:intergenic 20.0%
!! TTCATTAAGGTAAAATAAGA+AGG - chr8.4:77564066-77564085 None:intergenic 20.0%
!!! AATTTATGTTTTGGATTTCA+TGG + chr8.4:77562552-77562571 MS.gene020168:intron 20.0%
!!! ATCATTTATTCCTTTCATTT+TGG + chr8.4:77561253-77561272 MS.gene020168:intron 20.0%
!!! ATGTTATTACTATGATTTTC+AGG + chr8.4:77564499-77564518 MS.gene020168:intron 20.0%
!!! GTGTTATTTTTACACAAAAT+GGG + chr8.4:77564340-77564359 MS.gene020168:intron 20.0%
!!! GTTCAATCTTTTATTTTTTG+TGG + chr8.4:77563779-77563798 MS.gene020168:intron 20.0%
!!! GTTTTAAAAAATTCATACCT+TGG - chr8.4:77561702-77561721 None:intergenic 20.0%
!!! TAAGTGATCAATTTATGTTT+TGG + chr8.4:77562543-77562562 MS.gene020168:intron 20.0%
!!! TGAATATTTGTATTCTTTTG+TGG + chr8.4:77564237-77564256 MS.gene020168:intron 20.0%
!!! TGTGTTATTTTTACACAAAA+TGG + chr8.4:77564339-77564358 MS.gene020168:intron 20.0%
!!! TTGATGATTCTTACTATTTT+AGG + chr8.4:77562960-77562979 MS.gene020168:intron 20.0%
! AAAATAATGATCATGCTGTT+CGG + chr8.4:77560853-77560872 MS.gene020168:intron 25.0%
! AATGAAACTGATTACATAAC+CGG + chr8.4:77562154-77562173 MS.gene020168:CDS 25.0%
! ACTAATTGAAAACCATTTCA+CGG - chr8.4:77561391-77561410 None:intergenic 25.0%
! ACTCAATTTCAAATCAAGAT+TGG - chr8.4:77564829-77564848 None:intergenic 25.0%
! AGAGTCCAAATATATAATAC+TGG - chr8.4:77562104-77562123 None:intergenic 25.0%
! AGATTATCACATCCTATATT+AGG + chr8.4:77563046-77563065 MS.gene020168:CDS 25.0%
! ATAAAGATTTAGCACTTCTA+AGG - chr8.4:77563334-77563353 None:intergenic 25.0%
! ATAAGAATTAAAAGGAGCTA+AGG + chr8.4:77564960-77564979 MS.gene020168:intron 25.0%
! ATGTAAAAATACTGTAATGC+TGG - chr8.4:77563668-77563687 None:intergenic 25.0%
! CATGATCTAACAATATCTTT+AGG + chr8.4:77563370-77563389 MS.gene020168:intron 25.0%
! CTATGAAACATATTATCTTC+TGG + chr8.4:77564203-77564222 MS.gene020168:intron 25.0%
! CTCTTTCCAAACATATTATT+CGG + chr8.4:77561345-77561364 MS.gene020168:intron 25.0%
! GAAAAAACAAGTCTTAGATT+CGG + chr8.4:77565196-77565215 MS.gene020168:intron 25.0%
! GAATTCAAAAACAATTTGGA+TGG + chr8.4:77564369-77564388 MS.gene020168:intron 25.0%
! GATACTATTTAAGAATTCCA+AGG + chr8.4:77565158-77565177 MS.gene020168:intron 25.0%
! GCAATCAAATAAATATTGTC+AGG - chr8.4:77565239-77565258 None:intergenic 25.0%
! GCATAAACATCTATCATATA+AGG - chr8.4:77561967-77561986 None:intergenic 25.0%
! GGTTTCCAGTATTATATATT+TGG + chr8.4:77562096-77562115 MS.gene020168:intron 25.0%
! TAGTAATTGTTGAATTACAC+AGG - chr8.4:77562026-77562045 None:intergenic 25.0%
! TGATTCTGAATTTGCATTAT+AGG + chr8.4:77562075-77562094 MS.gene020168:intron 25.0%
! TGCATATGGAAAAAATATGT+TGG + chr8.4:77560724-77560743 MS.gene020168:intron 25.0%
! TTACAAGACAATATATAGCA+AGG - chr8.4:77562766-77562785 None:intergenic 25.0%
! TTATGGTTAATTACATTCAG+TGG + chr8.4:77564643-77564662 MS.gene020168:intron 25.0%
!! AAACTCAGTTGAATTTTGAA+AGG + chr8.4:77561718-77561737 MS.gene020168:intron 25.0%
!! ATCTAACAATATCTTTAGGA+TGG + chr8.4:77563374-77563393 MS.gene020168:intron 25.0%
!! TTGAGAGCATAAGAATTAAA+AGG + chr8.4:77564952-77564971 MS.gene020168:intron 25.0%
!!! AACTCAGTTGAATTTTGAAA+GGG + chr8.4:77561719-77561738 MS.gene020168:intron 25.0%
!!! ATTTTGGTCTCTTATATGAA+AGG + chr8.4:77564095-77564114 MS.gene020168:intron 25.0%
!!! GATGTTTTATTATGATAACC+AGG - chr8.4:77561485-77561504 None:intergenic 25.0%
!!! TAATTAGTTTTATTTGCTGC+AGG + chr8.4:77564849-77564868 MS.gene020168:intron 25.0%
!!! TACTATTTTAGGACATTGAT+GGG + chr8.4:77562971-77562990 MS.gene020168:intron 25.0%
!!! TAGATCATGTTACTTGTTTT+TGG - chr8.4:77563359-77563378 None:intergenic 25.0%
!!! TCACAATTGATGATTTTTTC+AGG + chr8.4:77561605-77561624 MS.gene020168:intron 25.0%
!!! TTACTATTTTAGGACATTGA+TGG + chr8.4:77562970-77562989 MS.gene020168:intron 25.0%
!!! TTTGTGGTATTTTAGAAAGT+GGG + chr8.4:77563795-77563814 MS.gene020168:intron 25.0%
!!! TTTTATAAACGTTTTCTAGC+TGG + chr8.4:77565317-77565336 MS.gene020168:CDS 25.0%
!!! TTTTGTGGTATTTTAGAAAG+TGG + chr8.4:77563794-77563813 MS.gene020168:intron 25.0%
AAGGACTTTGTATGACTTTA+TGG + chr8.4:77564114-77564133 MS.gene020168:intron 30.0%
AGGTAACTGAAAACCATTTA+AGG - chr8.4:77560762-77560781 None:intergenic 30.0%
ATGGTTACCATTCAAATACA+TGG + chr8.4:77564388-77564407 MS.gene020168:intron 30.0%
ATTAATTGACCCTTGAATGA+AGG + chr8.4:77560460-77560479 MS.gene020168:intron 30.0%
ATTTAAGAATTCCAAGGAGT+TGG + chr8.4:77565164-77565183 MS.gene020168:intron 30.0%
GATGATTTCTTCTCATAGTT+TGG + chr8.4:77561745-77561764 MS.gene020168:intron 30.0%
GATTATGTTTAAGCCAACAA+AGG + chr8.4:77560927-77560946 MS.gene020168:intron 30.0%
GGTAACTGAAAACCATTTAA+GGG - chr8.4:77560761-77560780 None:intergenic 30.0%
GTAACTGAAAACCATTTAAG+GGG - chr8.4:77560760-77560779 None:intergenic 30.0%
GTTACAGATGAACATATTGA+TGG + chr8.4:77562629-77562648 MS.gene020168:CDS 30.0%
TAATTAACCACGTATCTAGA+CGG + chr8.4:77564713-77564732 MS.gene020168:intron 30.0%
TCTACCTTTCATTACTTCAT+AGG - chr8.4:77562398-77562417 None:intergenic 30.0%
TGGAAAAAATATGTTGGAAG+TGG + chr8.4:77560730-77560749 MS.gene020168:intron 30.0%
TTAATTATACTACAGCACTG+AGG + chr8.4:77562908-77562927 MS.gene020168:intron 30.0%
TTGTAATGGCAGAAGAATTA+AGG - chr8.4:77561560-77561579 None:intergenic 30.0%
TTGTTTCCTTAACTACCTTA+AGG - chr8.4:77562216-77562235 None:intergenic 30.0%
! ATGTTTGGAAAGAGACTTTT+GGG - chr8.4:77561339-77561358 None:intergenic 30.0%
! TACTATTTTGTTGAGTCAGA+AGG + chr8.4:77560522-77560541 MS.gene020168:CDS 30.0%
! TATGTTTGGAAAGAGACTTT+TGG - chr8.4:77561340-77561359 None:intergenic 30.0%
! TATTTGATTGCATTGGTACA+GGG + chr8.4:77565248-77565267 MS.gene020168:intron 30.0%
! TTATTTGATTGCATTGGTAC+AGG + chr8.4:77565247-77565266 MS.gene020168:intron 30.0%
! TTGTTGCTATTGATAAGTTG+TGG - chr8.4:77563192-77563211 None:intergenic 30.0%
! TTTGCTGCTTCAAAATTGAA+AGG - chr8.4:77561632-77561651 None:intergenic 30.0%
! TTTGTATTCTTTTGTGGCAT+TGG + chr8.4:77564243-77564262 MS.gene020168:intron 30.0%
! TTTTCTTTTGACAAAACCAG+TGG + chr8.4:77562290-77562309 MS.gene020168:intron 30.0%
!! AACTCTTTTAAGAGCAAGTT+TGG + chr8.4:77562719-77562738 MS.gene020168:intron 30.0%
!! TCTTACTTTTCTGACCATAA+AGG + chr8.4:77564895-77564914 MS.gene020168:CDS 30.0%
!! TTTTTGGTAGAGACTCTATA+GGG + chr8.4:77561768-77561787 MS.gene020168:intron 30.0%
!!! CATATTTTTTCCATATGCAC+TGG - chr8.4:77560723-77560742 None:intergenic 30.0%
!!! TCTTCTCATAGTTTGGTTTT+TGG + chr8.4:77561752-77561771 MS.gene020168:intron 30.0%
AACACACTCAAGAGTTTATG+AGG - chr8.4:77564325-77564344 None:intergenic 35.0%
AAGACTTTGAATTAGGACCA+TGG + chr8.4:77564999-77565018 MS.gene020168:intron 35.0%
AAGTTTCATGTTTCTTGCAG+TGG + chr8.4:77563920-77563939 MS.gene020168:intron 35.0%
AATTGTTGTCGTCACATTTG+TGG + chr8.4:77564749-77564768 MS.gene020168:intron 35.0%
ACTAGATGGCAACCTAATAT+AGG - chr8.4:77563061-77563080 None:intergenic 35.0%
ACTCTTAACCAAATGGTTGA+TGG - chr8.4:77560689-77560708 None:intergenic 35.0%
AGAATTAAAAGGAGCTAAGG+AGG + chr8.4:77564963-77564982 MS.gene020168:intron 35.0%
AGTCACATACCTTCATTCAA+GGG - chr8.4:77560472-77560491 None:intergenic 35.0%
ATCAATTGGGTACAAGATTG+TGG + chr8.4:77563991-77564010 MS.gene020168:CDS 35.0%
ATTGTTGTCGTCACATTTGT+GGG + chr8.4:77564750-77564769 MS.gene020168:intron 35.0%
CAAATGTGACGACAACAATT+TGG - chr8.4:77564749-77564768 None:intergenic 35.0%
CAAGCTTGCAAAAATTGATG+AGG + chr8.4:77562881-77562900 MS.gene020168:CDS 35.0%
CACTTTCTTGATCTTCTACA+GGG + chr8.4:77562473-77562492 MS.gene020168:intron 35.0%
CAGGATATAATTCAAACCAC+TGG - chr8.4:77562309-77562328 None:intergenic 35.0%
CTCTTAACCAAATGGTTGAT+GGG - chr8.4:77560688-77560707 None:intergenic 35.0%
CTTAACTACCTTAAGGAGAA+AGG - chr8.4:77562209-77562228 None:intergenic 35.0%
CTTTCTCCTTAAGGTAGTTA+AGG + chr8.4:77562207-77562226 MS.gene020168:intron 35.0%
GACAGTCAAACAAAGTATAG+AGG - chr8.4:77563481-77563500 None:intergenic 35.0%
GATATCGAGCTCTTATATTC+AGG + chr8.4:77563635-77563654 MS.gene020168:CDS 35.0%
GCACACAATACATACCTTTA+TGG - chr8.4:77564912-77564931 None:intergenic 35.0%
GGTTAATTACGTTTAGTGCA+TGG - chr8.4:77564702-77564721 None:intergenic 35.0%
GTAAAGAAACATACTGTGCA+TGG - chr8.4:77563219-77563238 None:intergenic 35.0%
GTGTGATTAACAAGTGTACT+TGG - chr8.4:77561446-77561465 None:intergenic 35.0%
GTTCGTCCGAATAATATGTT+TGG - chr8.4:77561354-77561373 None:intergenic 35.0%
TAAAAATCCAATGCCTCTTG+TGG - chr8.4:77565302-77565321 None:intergenic 35.0%
TACAGAACATACATAACTGC+TGG + chr8.4:77563888-77563907 MS.gene020168:intron 35.0%
TATCTCAGATGAGTTGTTTG+AGG + chr8.4:77562688-77562707 MS.gene020168:CDS 35.0%
TCTGATGAAACAGAAAAGTG+TGG + chr8.4:77563522-77563541 MS.gene020168:intron 35.0%
TGACATGTGTGTTCCATTTA+CGG + chr8.4:77563949-77563968 MS.gene020168:CDS 35.0%
TGCATCTAAACGTATAGCAA+TGG - chr8.4:77563710-77563729 None:intergenic 35.0%
TGGTCAGAAAAGTAAGATTG+TGG - chr8.4:77564892-77564911 None:intergenic 35.0%
TTGAAAAGAATGAGCTCTTC+AGG + chr8.4:77561856-77561875 MS.gene020168:intron 35.0%
! AAAAAAAGTGTACGTGAGTC+CGG - chr8.4:77561085-77561104 None:intergenic 35.0%
! ACTTTTCTGTGTAGATTTCC+TGG + chr8.4:77561464-77561483 MS.gene020168:intron 35.0%
! ATTCCAAGGAGTTGGTTTAA+TGG + chr8.4:77565172-77565191 MS.gene020168:intron 35.0%
! GAAGCCGAAACTGAATTTTA+AGG + chr8.4:77562510-77562529 MS.gene020168:CDS 35.0%
! GATGGATTCATATATGAGCA+TGG + chr8.4:77560606-77560625 MS.gene020168:CDS 35.0%
! TATCCAATGGTCAAGTTGTT+GGG + chr8.4:77564032-77564051 MS.gene020168:CDS 35.0%
! TGTTTGGAAAGAGACTTTTG+GGG - chr8.4:77561338-77561357 None:intergenic 35.0%
! TTATCCAATGGTCAAGTTGT+TGG + chr8.4:77564031-77564050 MS.gene020168:CDS 35.0%
! TTTGAAGCAGCAAAGACAAA+GGG + chr8.4:77561638-77561657 MS.gene020168:CDS 35.0%
!! ACTTTTGGGGGAATAAGAAA+AGG - chr8.4:77561325-77561344 None:intergenic 35.0%
!! ATTCTAGAACCATGCTATCA+CGG + chr8.4:77563009-77563028 MS.gene020168:CDS 35.0%
!! TGAATTACACAGGTCTTGTT+TGG - chr8.4:77562016-77562035 None:intergenic 35.0%
!!! GTTTTTGGTAGAGACTCTAT+AGG + chr8.4:77561767-77561786 MS.gene020168:intron 35.0%
!!! TTTTGAAGCAGCAAAGACAA+AGG + chr8.4:77561637-77561656 MS.gene020168:CDS 35.0%
AAACGCAGTCTTTATGTCTC+CGG - chr8.4:77562176-77562195 None:intergenic 40.0%
AAATTGTCAGCACAATGCTG+AGG - chr8.4:77560242-77560261 None:intergenic 40.0%
AACAGTGAACATGCTGATCT+AGG + chr8.4:77561152-77561171 MS.gene020168:intron 40.0%
AACAGTTAGCACTGTCTGTT+TGG + chr8.4:77560200-77560219 MS.gene020168:CDS 40.0%
AAGCATGGACGAGATCAATT+GGG + chr8.4:77563978-77563997 MS.gene020168:CDS 40.0%
ACAAGATTGTGGATGAATGG+AGG + chr8.4:77564002-77564021 MS.gene020168:CDS 40.0%
ACATCAGCAGCAAGTAGTTA+TGG + chr8.4:77561500-77561519 MS.gene020168:intron 40.0%
ACATGTGTGTTCCATTTACG+GGG + chr8.4:77563951-77563970 MS.gene020168:CDS 40.0%
ACTCTCCAGCAATGAAGAAA+GGG - chr8.4:77562345-77562364 None:intergenic 40.0%
ACTTGACCATTGGATAACCA+TGG - chr8.4:77564028-77564047 None:intergenic 40.0%
AGCAAGTAGTTATGGTTCAG+TGG + chr8.4:77561508-77561527 MS.gene020168:intron 40.0%
AGCATGTTCACTGTTACTCA+AGG - chr8.4:77561147-77561166 None:intergenic 40.0%
AGCGCAATGATCTCTTTGAT+GGG + chr8.4:77561009-77561028 MS.gene020168:intron 40.0%
ATACCTTCCAAGCATTATGC+TGG + chr8.4:77560312-77560331 MS.gene020168:CDS 40.0%
ATATATTTGGACTCTCCTGC+TGG + chr8.4:77562109-77562128 MS.gene020168:CDS 40.0%
ATATTATTCGGACGAACACG+AGG + chr8.4:77561357-77561376 MS.gene020168:intron 40.0%
ATTACTTCATAGGCCAGAGT+AGG - chr8.4:77562388-77562407 None:intergenic 40.0%
ATTTCCTTCGATCATGATGC+TGG + chr8.4:77563574-77563593 MS.gene020168:CDS 40.0%
CAATGAAGAAAGGGTTGGAA+AGG - chr8.4:77562336-77562355 None:intergenic 40.0%
CAGGGTTACATAGTTGGAAA+TGG + chr8.4:77562605-77562624 MS.gene020168:intron 40.0%
CAGTCACATACCTTCATTCA+AGG - chr8.4:77560473-77560492 None:intergenic 40.0%
CCACTTTCTTGATCTTCTAC+AGG + chr8.4:77562472-77562491 MS.gene020168:intron 40.0%
CCTGTAGAAGATCAAGAAAG+TGG - chr8.4:77562475-77562494 None:intergenic 40.0%
CCTGTGAGGAAAAGAATGTT+CGG + chr8.4:77563114-77563133 MS.gene020168:CDS 40.0%
CTCTTGTTCCATTTGTACAC+GGG + chr8.4:77562657-77562676 MS.gene020168:CDS 40.0%
CTGGCCTATGAAGTAATGAA+AGG + chr8.4:77562391-77562410 MS.gene020168:CDS 40.0%
GACATGTGTGTTCCATTTAC+GGG + chr8.4:77563950-77563969 MS.gene020168:CDS 40.0%
GCTCTTGTTCCATTTGTACA+CGG + chr8.4:77562656-77562675 MS.gene020168:CDS 40.0%
GGTACAAGATTGTGGATGAA+TGG + chr8.4:77563999-77564018 MS.gene020168:CDS 40.0%
GGTATTGTTCCATTGAAACC+AGG - chr8.4:77560297-77560316 None:intergenic 40.0%
GGTTGAACAATGAAGAAGTC+AGG + chr8.4:77563414-77563433 MS.gene020168:CDS 40.0%
GTTATCCCTCAATGTAACTG+CGG - chr8.4:77560799-77560818 None:intergenic 40.0%
TACACATGCCTTTCTCCTTA+AGG + chr8.4:77562198-77562217 MS.gene020168:CDS 40.0%
TACATACCCAGCATAATGCT+TGG - chr8.4:77560322-77560341 None:intergenic 40.0%
TACCTTCCAAGCATTATGCT+GGG + chr8.4:77560313-77560332 MS.gene020168:CDS 40.0%
TATAAGAGCTCGATATCCTC+TGG - chr8.4:77563632-77563651 None:intergenic 40.0%
TCACCATTAAACCAACTCCT+TGG - chr8.4:77565178-77565197 None:intergenic 40.0%
TCCAGAATACAAACCACAAG+AGG + chr8.4:77565286-77565305 MS.gene020168:CDS 40.0%
TGAAACTGCCATTGTAACAC+AGG + chr8.4:77560269-77560288 MS.gene020168:CDS 40.0%
TGTGACGACAACAATTTGGA+TGG - chr8.4:77564745-77564764 None:intergenic 40.0%
TGTGTTACAATGGCAGTTTC+AGG - chr8.4:77560270-77560289 None:intergenic 40.0%
TTATCCCTCAATGTAACTGC+GGG - chr8.4:77560798-77560817 None:intergenic 40.0%
TTGATAAGTTGTGGCCATGT+TGG - chr8.4:77563183-77563202 None:intergenic 40.0%
! AGAAAAGTGTGGTTAGTAGC+TGG + chr8.4:77563533-77563552 MS.gene020168:intron 40.0%
! ATACAAACCACAAGAGGCAT+TGG + chr8.4:77565292-77565311 MS.gene020168:CDS 40.0%
! ATGGTTTTCAGTTACCTCGA+CGG + chr8.4:77560765-77560784 MS.gene020168:intron 40.0%
! ATTCTTTTCCTCACAGGATG+AGG - chr8.4:77563111-77563130 None:intergenic 40.0%
! ATTTGCTGCAGGTATACTCA+AGG + chr8.4:77564860-77564879 MS.gene020168:intron 40.0%
! GAAAAGTGTGGTTAGTAGCT+GGG + chr8.4:77563534-77563553 MS.gene020168:intron 40.0%
! GACAGTTGCATTGATGCAAA+TGG - chr8.4:77563835-77563854 None:intergenic 40.0%
! GTTTGGAAAGAGACTTTTGG+GGG - chr8.4:77561337-77561356 None:intergenic 40.0%
! TGAATGAAGGTATGTGACTG+TGG + chr8.4:77560473-77560492 MS.gene020168:intron 40.0%
!! TTTTCCATATGCACTGGTGA+GGG - chr8.4:77560717-77560736 None:intergenic 40.0%
!! TTTTTCCATATGCACTGGTG+AGG - chr8.4:77560718-77560737 None:intergenic 40.0%
AAAGGGTTGGAAAGGAACTC+AGG - chr8.4:77562328-77562347 None:intergenic 45.0%
ACACAGGTTCCTGGTTTCAA+TGG + chr8.4:77560285-77560304 MS.gene020168:CDS 45.0%
ACCAGGAACCTGTGTTACAA+TGG - chr8.4:77560280-77560299 None:intergenic 45.0%
AGAAATTCCCATCACACTCG+CGG - chr8.4:77562833-77562852 None:intergenic 45.0%
AGGAGTTTATGTGCCTACTC+TGG + chr8.4:77562372-77562391 MS.gene020168:CDS 45.0%
AGTACCCGCAGTTACATTGA+GGG + chr8.4:77560791-77560810 MS.gene020168:intron 45.0%
ATATTGTCAGGGCTTGAACC+AGG - chr8.4:77565227-77565246 None:intergenic 45.0%
ATGTATTGTGTGCGTGTGTG+TGG + chr8.4:77564919-77564938 MS.gene020168:intron 45.0%
ATGTTGCATTCTGTTGCAGG+AGG + chr8.4:77562803-77562822 MS.gene020168:intron 45.0%
ATTGCTGGAGAGTCATATGC+AGG + chr8.4:77562352-77562371 MS.gene020168:CDS 45.0%
CAAGCATGGACGAGATCAAT+TGG + chr8.4:77563977-77563996 MS.gene020168:CDS 45.0%
CAATCCATATAGCTGGACCA+AGG + chr8.4:77561682-77561701 MS.gene020168:CDS 45.0%
CACAAGAACCTAACTTCCAG+AGG + chr8.4:77563613-77563632 MS.gene020168:CDS 45.0%
CAGCGCAATGATCTCTTTGA+TGG + chr8.4:77561008-77561027 MS.gene020168:intron 45.0%
CATACCTTGGTCCAGCTATA+TGG - chr8.4:77561689-77561708 None:intergenic 45.0%
CATCAAAGAGATCATTGCGC+TGG - chr8.4:77561010-77561029 None:intergenic 45.0%
CCAACTGAGTCAACCTTTGT+TGG - chr8.4:77560943-77560962 None:intergenic 45.0%
CCATTAAGCCAAAGAACCAC+TGG - chr8.4:77560564-77560583 None:intergenic 45.0%
CCTAACTCACGGAAACTAGA+TGG - chr8.4:77563075-77563094 None:intergenic 45.0%
CTGTGGATGAAAGTCATGGA+AGG + chr8.4:77560490-77560509 MS.gene020168:CDS 45.0%
GAAAGCAATTCACACTGCAG+AGG + chr8.4:77563436-77563455 MS.gene020168:CDS 45.0%
GAAGTGGTCAACCCCTTAAA+TGG + chr8.4:77560746-77560765 MS.gene020168:intron 45.0%
GACTCTCCAGCAATGAAGAA+AGG - chr8.4:77562346-77562365 None:intergenic 45.0%
GAGGAATTGCAACCGTGAAA+TGG + chr8.4:77561376-77561395 MS.gene020168:intron 45.0%
GGCTCGAACTCTTAACCAAA+TGG - chr8.4:77560696-77560715 None:intergenic 45.0%
GTACCCAACAACTTGACCAT+TGG - chr8.4:77564038-77564057 None:intergenic 45.0%
GTCTTAGATTCGGATGTACC+TGG + chr8.4:77565206-77565225 MS.gene020168:intron 45.0%
GTGACTGTGGATGAAAGTCA+TGG + chr8.4:77560486-77560505 MS.gene020168:CDS 45.0%
GTTCCATTTGTACACGGGAT+GGG + chr8.4:77562662-77562681 MS.gene020168:CDS 45.0%
TACCCAGCATAATGCTTGGA+AGG - chr8.4:77560318-77560337 None:intergenic 45.0%
TAGTACCCGCAGTTACATTG+AGG + chr8.4:77560790-77560809 MS.gene020168:intron 45.0%
TATGAAAACCCAACACCAGC+AGG - chr8.4:77562127-77562146 None:intergenic 45.0%
TCCAACCCTTTCTTCATTGC+TGG + chr8.4:77562337-77562356 MS.gene020168:CDS 45.0%
TCCAGCAATGAAGAAAGGGT+TGG - chr8.4:77562341-77562360 None:intergenic 45.0%
TCCTGCAACAGAATGCAACA+TGG - chr8.4:77562804-77562823 None:intergenic 45.0%
TCTCAGTCTCACCTAACTCA+CGG - chr8.4:77563086-77563105 None:intergenic 45.0%
TGCACCTCAATCCATATAGC+TGG + chr8.4:77561675-77561694 MS.gene020168:CDS 45.0%
TGTGTGCAGGGTTACATAGT+TGG + chr8.4:77562599-77562618 MS.gene020168:intron 45.0%
TGTTCCATTTGTACACGGGA+TGG + chr8.4:77562661-77562680 MS.gene020168:CDS 45.0%
! ATCTGAAACTCGTTGTGTGC+AGG + chr8.4:77562586-77562605 MS.gene020168:intron 45.0%
! CCAACAAAGGTTGACTCAGT+TGG + chr8.4:77560940-77560959 MS.gene020168:intron 45.0%
! CCAGTGGTTCTTTGGCTTAA+TGG + chr8.4:77560561-77560580 MS.gene020168:CDS 45.0%
! CCATCTAGTTTCCGTGAGTT+AGG + chr8.4:77563072-77563091 MS.gene020168:CDS 45.0%
! CCGAACATTCTTTTCCTCAC+AGG - chr8.4:77563117-77563136 None:intergenic 45.0%
! CTCGATATCCTCTGGAAGTT+AGG - chr8.4:77563624-77563643 None:intergenic 45.0%
! CTCTGGAAGTTAGGTTCTTG+TGG - chr8.4:77563615-77563634 None:intergenic 45.0%
! GCCTCTTGTGGTTTGTATTC+TGG - chr8.4:77565290-77565309 None:intergenic 45.0%
! GTGGTTCTTTGGCTTAATGG+TGG + chr8.4:77560564-77560583 MS.gene020168:CDS 45.0%
! TATGGATTGAGGTGCAGAGT+TGG - chr8.4:77561671-77561690 None:intergenic 45.0%
! TCTGAAACTCGTTGTGTGCA+GGG + chr8.4:77562587-77562606 MS.gene020168:intron 45.0%
! TGGTCCAGCTATATGGATTG+AGG - chr8.4:77561682-77561701 None:intergenic 45.0%
!! TTTGGCTTAATGGTGGACCT+GGG + chr8.4:77560571-77560590 MS.gene020168:CDS 45.0%
AAAGAATGTTCGGTCGCGCT+TGG + chr8.4:77563124-77563143 MS.gene020168:CDS 50.0%
AGAACCACTGGATCCACAGA+AGG - chr8.4:77560552-77560571 None:intergenic 50.0%
AGACCCATCCCGTGTACAAA+TGG - chr8.4:77562668-77562687 None:intergenic 50.0%
AGGTTAACCGCGAGTGTGAT+GGG + chr8.4:77562823-77562842 MS.gene020168:CDS 50.0%
AGTTAAACCCACGACCTTGC+GGG - chr8.4:77560980-77560999 None:intergenic 50.0%
ATCCCTCACAGGTGCTCTAA+GGG - chr8.4:77563151-77563170 None:intergenic 50.0%
CAATTCACACTGCAGAGGTG+AGG + chr8.4:77563441-77563460 MS.gene020168:intron 50.0%
CAGCTCAACTCCTAGTGCTA+AGG - chr8.4:77564273-77564292 None:intergenic 50.0%
CATGCTTGACTCCCCGTAAA+TGG - chr8.4:77563965-77563984 None:intergenic 50.0%
CATTGGTCCACCTTAGCACT+AGG + chr8.4:77564260-77564279 MS.gene020168:intron 50.0%
CATTTACGGGGAGTCAAGCA+TGG + chr8.4:77563963-77563982 MS.gene020168:CDS 50.0%
CCATCAAAGCTAGAACACCC+AGG - chr8.4:77560591-77560610 None:intergenic 50.0%
CTCAACTCCTAGTGCTAAGG+TGG - chr8.4:77564270-77564289 None:intergenic 50.0%
CTGAGAAACCTCATCCTGTG+AGG + chr8.4:77563100-77563119 MS.gene020168:CDS 50.0%
CTGTGGATCCAGTGGTTCTT+TGG + chr8.4:77560553-77560572 MS.gene020168:CDS 50.0%
GAGTTAAACCCACGACCTTG+CGG - chr8.4:77560981-77561000 None:intergenic 50.0%
GCCATGTTGCATTCTGTTGC+AGG + chr8.4:77562800-77562819 MS.gene020168:intron 50.0%
GCCATTGTAACACAGGTTCC+TGG + chr8.4:77560276-77560295 MS.gene020168:CDS 50.0%
GCTTCCAGCATCATGATCGA+AGG - chr8.4:77563581-77563600 None:intergenic 50.0%
GTCAGAAGGTAAGCCTTCTG+TGG + chr8.4:77560536-77560555 MS.gene020168:CDS 50.0%
GTTAACGCCGTCTAGATACG+TGG - chr8.4:77564723-77564742 None:intergenic 50.0%
TAAGCCTTCTGTGGATCCAG+TGG + chr8.4:77560545-77560564 MS.gene020168:CDS 50.0%
TGGAGGCCATGGTTATCCAA+TGG + chr8.4:77564019-77564038 MS.gene020168:CDS 50.0%
TGTGTGCGTGTGTGTGGATT+AGG + chr8.4:77564925-77564944 MS.gene020168:intron 50.0%
TTGTGGATGAATGGAGGCCA+TGG + chr8.4:77564008-77564027 MS.gene020168:CDS 50.0%
! ATGGCTCTGTTGCAACTGCA+TGG + chr8.4:77563393-77563412 MS.gene020168:CDS 50.0%
! ATTGCATTGGTACAGGGAGC+TGG + chr8.4:77565254-77565273 MS.gene020168:intron 50.0%
! GTGTGCGTGTGTGTGGATTA+GGG + chr8.4:77564926-77564945 MS.gene020168:intron 50.0%
! TAAGAACTGACTCACCCGCA+AGG + chr8.4:77560963-77560982 MS.gene020168:intron 50.0%
!! ACCAAATGGTTGATGGGCAC+AGG - chr8.4:77560682-77560701 None:intergenic 50.0%
!! CCTGGGTGTTCTAGCTTTGA+TGG + chr8.4:77560588-77560607 MS.gene020168:CDS 50.0%
!! CTTTGGCTTAATGGTGGACC+TGG + chr8.4:77560570-77560589 MS.gene020168:CDS 50.0%
ACCATGCTATCACGGCACAG+AGG + chr8.4:77563017-77563036 MS.gene020168:CDS 55.0%
CATCCCTCACAGGTGCTCTA+AGG - chr8.4:77563152-77563171 None:intergenic 55.0%
GAGGTTAACCGCGAGTGTGA+TGG + chr8.4:77562822-77562841 MS.gene020168:CDS 55.0%
GATTGAGGTGCAGAGTTGGC+AGG - chr8.4:77561667-77561686 None:intergenic 55.0%
GCCTGTGCCCATCAACCATT+TGG + chr8.4:77560678-77560697 MS.gene020168:intron 55.0%
GGCTCAGTGAGCGTTAACAG+AGG - chr8.4:77561048-77561067 None:intergenic 55.0%
GGGATGGCAACGTACCAACA+TGG + chr8.4:77563166-77563185 MS.gene020168:CDS 55.0%
TGGACTCTCCTGCTGGTGTT+GGG + chr8.4:77562116-77562135 MS.gene020168:CDS 55.0%
TTGGACTCTCCTGCTGGTGT+TGG + chr8.4:77562115-77562134 MS.gene020168:CDS 55.0%
! CTTAGAGCACCTGTGAGGGA+TGG + chr8.4:77563150-77563169 MS.gene020168:CDS 55.0%
! GAGATCATTGCGCTGGCAAC+AGG - chr8.4:77561003-77561022 None:intergenic 55.0%
! TCCCTCACAGGTGCTCTAAG+GGG - chr8.4:77563150-77563169 None:intergenic 55.0%
AGTGTACGTGAGTCCGGCTC+TGG - chr8.4:77561079-77561098 None:intergenic 60.0%
CGAGCCCTCACCAGTGCATA+TGG + chr8.4:77560710-77560729 MS.gene020168:intron 60.0%
CTGCGGGTACTAATCCGTCG+AGG - chr8.4:77560782-77560801 None:intergenic 60.0%
GCCTCTGTGCCGTGATAGCA+TGG - chr8.4:77563021-77563040 None:intergenic 60.0%
GGTACGTTGCCATCCCTCAC+AGG - chr8.4:77563162-77563181 None:intergenic 60.0%
GTGTACGTGAGTCCGGCTCT+GGG - chr8.4:77561078-77561097 None:intergenic 60.0%
TGACTCACCCGCAAGGTCGT+GGG + chr8.4:77560970-77560989 MS.gene020168:intron 60.0%
TGTACGTGAGTCCGGCTCTG+GGG - chr8.4:77561077-77561096 None:intergenic 60.0%
! GCCCCTTAGAGCACCTGTGA+GGG + chr8.4:77563146-77563165 MS.gene020168:CDS 60.0%
CTGACTCACCCGCAAGGTCG+TGG + chr8.4:77560969-77560988 MS.gene020168:intron 65.0%
GAGCCTTGAGACCCCAGAGC+CGG + chr8.4:77561063-77561082 MS.gene020168:intron 65.0%
! GGCCCCTTAGAGCACCTGTG+AGG + chr8.4:77563145-77563164 MS.gene020168:CDS 65.0%
!! AGTCCGGCTCTGGGGTCTCA+AGG - chr8.4:77561069-77561088 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 77560192 77565352 77560192 ID=MS.gene020168
chr8.4 mRNA 77560192 77565352 77560192 ID=MS.gene020168.t1;Parent=MS.gene020168
chr8.4 exon 77560192 77560334 77560192 ID=MS.gene020168.t1.exon1;Parent=MS.gene020168.t1
chr8.4 CDS 77560192 77560334 77560192 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77560482 77560627 77560482 ID=MS.gene020168.t1.exon2;Parent=MS.gene020168.t1
chr8.4 CDS 77560482 77560627 77560482 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77561627 77561703 77561627 ID=MS.gene020168.t1.exon3;Parent=MS.gene020168.t1
chr8.4 CDS 77561627 77561703 77561627 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562097 77562219 77562097 ID=MS.gene020168.t1.exon4;Parent=MS.gene020168.t1
chr8.4 CDS 77562097 77562219 77562097 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562310 77562412 77562310 ID=MS.gene020168.t1.exon5;Parent=MS.gene020168.t1
chr8.4 CDS 77562310 77562412 77562310 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562494 77562531 77562494 ID=MS.gene020168.t1.exon6;Parent=MS.gene020168.t1
chr8.4 CDS 77562494 77562531 77562494 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562608 77562709 77562608 ID=MS.gene020168.t1.exon7;Parent=MS.gene020168.t1
chr8.4 CDS 77562608 77562709 77562608 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562822 77562902 77562822 ID=MS.gene020168.t1.exon8;Parent=MS.gene020168.t1
chr8.4 CDS 77562822 77562902 77562822 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77562982 77563224 77562982 ID=MS.gene020168.t1.exon9;Parent=MS.gene020168.t1
chr8.4 CDS 77562982 77563224 77562982 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77563392 77563457 77563392 ID=MS.gene020168.t1.exon10;Parent=MS.gene020168.t1
chr8.4 CDS 77563392 77563457 77563392 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77563535 77563656 77563535 ID=MS.gene020168.t1.exon11;Parent=MS.gene020168.t1
chr8.4 CDS 77563535 77563656 77563535 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77563940 77564053 77563940 ID=MS.gene020168.t1.exon12;Parent=MS.gene020168.t1
chr8.4 CDS 77563940 77564053 77563940 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77564871 77564916 77564871 ID=MS.gene020168.t1.exon13;Parent=MS.gene020168.t1
chr8.4 CDS 77564871 77564916 77564871 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
chr8.4 exon 77565269 77565352 77565269 ID=MS.gene020168.t1.exon14;Parent=MS.gene020168.t1
chr8.4 CDS 77565269 77565352 77565269 ID=cds.MS.gene020168.t1;Parent=MS.gene020168.t1
Gene Sequence

>MS.gene020168

ATGAACAAAACAGTTAGCACTGTCTGTTTGGTCTTACTTCACATTTACCTCAGCATTGTGCTGACAATTTCAGCACCTGAAACTGCCATTGTAACACAGGTTCCTGGTTTCAATGGAACAATACCTTCCAAGCATTATGCTGGGTATGTAGCTTTAAAAATTCCAAATTTTTGTAATTTTTATTCATGTTTTCTTATAATAAATTTTGGGTTATTTTTAATTCTTTCTTTTTTTGACTTATTTGAAGAAATGCATTATGTTATGTTTAATTAATTGACCCTTGAATGAAGGTATGTGACTGTGGATGAAAGTCATGGAAGGAATTTGTATTACTATTTTGTTGAGTCAGAAGGTAAGCCTTCTGTGGATCCAGTGGTTCTTTGGCTTAATGGTGGACCTGGGTGTTCTAGCTTTGATGGATTCATATATGAGCATGGTAATTTTTCTCATTTGATTGTGTTGTTCTTTTTAATACATGTAGTAGATGCCTGTGCCCATCAACCATTTGGTTAAGAGTTCGAGCCCTCACCAGTGCATATGGAAAAAATATGTTGGAAGTGGTCAACCCCTTAAATGGTTTTCAGTTACCTCGACGGATTAGTACCCGCAGTTACATTGAGGGATAACTTGATTTAAGTAAATATAATATGCACTAAACAAGAAAATAATGATCATGCTGTTCGGACATTTTATCAAACACATAATATGCTTCATTTTTAAATTTAGTTACTTGAAGATTATGTTTAAGCCAACAAAGGTTGACTCAGTTGGTAAGAACTGACTCACCCGCAAGGTCGTGGGTTTAACTCCTGTTGCCAGCGCAATGATCTCTTTGATGGGTAATTTATAAGTACCTCTGTTAACGCTCACTGAGCCTTGAGACCCCAGAGCCGGACTCACGTACACTTTTTTTCTATCCAAAACAAAAAAAAAAAGATTATGTCTAAACTAACCTTGAGTAACAGTGAACATGCTGATCTAGGATTTTATTTTTTTATTTTGAATTAAGAGATATTTGATGTTTTTTTAAGGATTTACTATATTAAGCTTTATGATAGTATATCATTTATTCCTTTCATTTTGGAACATTATTAAATCACAGAATGTTCAGCTGAAATGAAATTTTTAGTCCTTTTCTTATTCCCCCAAAAGTCTCTTTCCAAACATATTATTCGGACGAACACGAGGAATTGCAACCGTGAAATGGTTTTCAATTAGTCAGACAAAACTCTTTTTGTTGATTACTAGCTACCAAGTACACTTGTTAATCACACTTTTCTGTGTAGATTTCCTGGTTATCATAATAAAACATCAGCAGCAAGTAGTTATGGTTCAGTGGTTTTAATATTTGCTGACTTGAGTTTTCCTTAATTCTTCTGCCATTACAAATTGTTATTCAATTTATAAATCATGTCACAATTGATGATTTTTTCAGGTCCTTTCAATTTTGAAGCAGCAAAGACAAAGGGAAGCCTGCCAACTCTGCACCTCAATCCATATAGCTGGACCAAGGTATGAATTTTTTAAAACTCAGTTGAATTTTGAAAGGGAATGATGATTTCTTCTCATAGTTTGGTTTTTGGTAGAGACTCTATAGGGTTGTTTGTATTGACTTATTTGAGTTTATGTATAATAAGCACTTGTGAGACTGTTTGAGAGAGCTTTTGAAAAGAATGAGCTCTTCAGGATAGCTTATGAAAACAGCTTATAACTTATATGTAAACTGTTTCTGTTTGACTTTATCTTTTGTTAGAGAGAACTTATATGTAAGCCCTTATATGATAGATGTTTATGCTATAAACACTTAGTTAAGCTGTTTATCCAAACAAGACCTGTGTAATTCAACAATTACTAGTTATTTTTTCTTGTTATCAAATGGTATATGATTCTGAATTTGCATTATAGGTTTCCAGTATTATATATTTGGACTCTCCTGCTGGTGTTGGGTTTTCATACTCTAAGAATGAAACTGATTACATAACCGGAGACATAAAGACTGCGTTTGATACACATGCCTTTCTCCTTAAGGTAGTTAAGGAAACAACTAGTAGATTATTGAAATCATCTAATCTGTATTCTCATCAATTTTCTTACATATTTTTCTTTTGACAAAACCAGTGGTTTGAATTATATCCTGAGTTCCTTTCCAACCCTTTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTGGCCTATGAAGTAATGAAAGGTAGAAAGTTGTGTCCATTAAAATGTGTTGTATTAATGTGTTAGAATCACTACTAAGATCCACTTTCTTGATCTTCTACAGGGATTGATGCTGATGTGAAGCCGAAACTGAATTTTAAGGTTTTTGTCTTTAAGTGATCAATTTATGTTTTGGATTTCATGGCTACTGCTGACATCTGAAACTCGTTGTGTGCAGGGTTACATAGTTGGAAATGGTGTTACAGATGAACATATTGATGGAAATGCTCTTGTTCCATTTGTACACGGGATGGGTCTTATCTCAGATGAGTTGTTTGAGGTGAAAATAAACTCTTTTAAGAGCAAGTTTGGAACTATATCTATTGTTAGAAACCTTGCTATATATTGTCTTGTAAGTATGTTTCTTTAAGCCATGTTGCATTCTGTTGCAGGAGGTTAACCGCGAGTGTGATGGGAATTTCTATAATTCACTCAGTGATAATTGTACAAACAAGCTTGCAAAAATTGATGAGGTGATTTAATTATACTACAGCACTGAGGTTATAAGAAATAAGTGAATTTGGCACTCATTGATGATTCTTACTATTTTAGGACATTGATGGGTTGAACGTATATAACATTCTAGAACCATGCTATCACGGCACAGAGGCAGATAAGATTATCACATCCTATATTAGGTTGCCATCTAGTTTCCGTGAGTTAGGTGAGACTGAGAAACCTCATCCTGTGAGGAAAAGAATGTTCGGTCGCGCTTGGCCCCTTAGAGCACCTGTGAGGGATGGCAACGTACCAACATGGCCACAACTTATCAATAGCAACAATGTTCCATGCACAGTATGTTTCTTTACTACTATCTAAGTGTCTATATTTACCATTTAATATCTACTTATTAGCTACTAATTGATTTAATTGCTTGATTATTATTGCATACTTGTATAAACCTTAGAAGTGCTAAATCTTTATTGCCAAAAACAAGTAACATGATCTAACAATATCTTTAGGATGGCTCTGTTGCAACTGCATGGTTGAACAATGAAGAAGTCAGGAAAGCAATTCACACTGCAGAGGTGAGGTTTCTTGTAAGATACCTCTATACTTTGTTTGACTGTCAAAGCACTGAATTATGATCTCTCTGATGAAACAGAAAAGTGTGGTTAGTAGCTGGGATTTATGCACAGACAAAATTTCCTTCGATCATGATGCTGGAAGCATGATAAAATACCACAAGAACCTAACTTCCAGAGGATATCGAGCTCTTATATTCAGGTGAATTTCCAGCATTACAGTATTTTTACATTATGATAGACATAACTACTCCATTGCTATACGTTTAGATGCAGTTCATTGTTCCAATTGATTGTATGAAATATGAGATATAAAAGTTGCATGTTCAATCTTTTATTTTTTGTGGTATTTTAGAAAGTGGGATTTACTACTTTTTCCATTTGCATCAATGCAACTGTCTCTGATCTTTCTTGTGATTACTGAAAAAGTAAATACAGAACATACATAACTGCTGGAGAAATTAAAAGTTTCATGTTTCTTGCAGTGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAATTGGGTACAAGATTGTGGATGAATGGAGGCCATGGTTATCCAATGGTCAAGTTGTTGGGTACTTATTCCTTCTTATTTTACCTTAATGAATTTTCAAATATTTTGGTCTCTTATATGAAAGGACTTTGTATGACTTTATGGAATTGTTTCAGAAATAGTTTATAGATGTAAATTAAAAGGATCTTCTTGAATGATCTACAACATGCACTATGAAACATATTATCTTCTGGTATGAGATCTATGAATATTTGTATTCTTTTGTGGCATTGGTCCACCTTAGCACTAGGAGTTGAGCTGTCAAGATTGCAATCTGCTGTCAAAATATGCCTCATAAACTCTTGAGTGTGTTATTTTTACACAAAATGGGACACTAGAATTCAAAAACAATTTGGATGGTTACCATTCAAATACATGGTTAATTACATTTAGTAAATAACTAATGAATATGATAAGGTGTTGCAACTCATTAATCATCCACAGAACAAAATTAACCATGATTTTGTATGTTATTACTATGATTTTCAGGTGTATATTTGAACACAAATTGTGATTAATAGATATCATATATTTAAAAAACCTGAAAATCATATATAAAACATACTTTGGATGGTTATAATAGATTTCATGTATATTTGAACGTGTAAATATTATGGTTAATTACATTCAGTGGATAATTAATGAGTTTTGACACTATGCTAATCAGCCATGCACTAAACGTAATTAACCACGTATCTAGACGGCGTTAACCATCCAAATTGTTGTCGTCACATTTGTGGGTCCAAATATCATTTCTGTAAACATTTTTCACAATGTATATTTAGTATAAAATACCAATCTTGATTTGAAATTGAGTTAATTAGTTTTATTTGCTGCAGGTATACTCAAGGATATGACCACAATCTTACTTTTCTGACCATAAAGGTATGTATTGTGTGCGTGTGTGTGGATTAGGGCATTTGAGAGCATAAGAATTAAAAGGAGCTAAGGAGGCAGAGAAAATATAAAGACTTTGAATTAGGACCATGGTTTAATTATAAAAGATTAGCATTAGCTCTTATTTATGCTAATTTCAGACTTTTTTATATACTAATACTGGTTTCTTATTAATGAATCCTAATTAAATTGGAAAACAAATCATGAAAAAATGAATATGAAAACCAAAGATACTATTTAAGAATTCCAAGGAGTTGGTTTAATGGTGAAAAAACAAGTCTTAGATTCGGATGTACCTGGTTCAAGCCCTGACAATATTTATTTGATTGCATTGGTACAGGGAGCTGGACATACAGTTCCAGAATACAAACCACAAGAGGCATTGGATTTTTATAAACGTTTTCTAGCTGGATTACCAATATGA
Protein sequence

>MS.gene020168.t1

MNKTVSTVCLVLLHIYLSIVLTISAPETAIVTQVPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESEGKPSVDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGSLPTLHLNPYSWTKVSSIIYLDSPAGVGFSYSKNETDYITGDIKTAFDTHAFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLAYEVMKGIDADVKPKLNFKGYIVGNGVTDEHIDGNALVPFVHGMGLISDELFEEVNRECDGNFYNSLSDNCTNKLAKIDEDIDGLNVYNILEPCYHGTEADKIITSYIRLPSSFRELGETEKPHPVRKRMFGRAWPLRAPVRDGNVPTWPQLINSNNVPCTDGSVATAWLNNEEVRKAIHTAEKSVVSSWDLCTDKISFDHDAGSMIKYHKNLTSRGYRALIFSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWLSNGQVVGYTQGYDHNLTFLTIKGAGHTVPEYKPQEALDFYKRFLAGLPI