AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38032.t1 MTR_5g097180 94.286 455 25 1 2 455 1 455 0.0 883
MS.gene38032.t1 MTR_4g084710 81.596 451 80 2 7 454 5 455 0.0 745
MS.gene38032.t1 MTR_4g057585 32.759 406 256 7 38 433 92 490 1.08e-71 234
MS.gene38032.t1 MTR_4g057595 32.297 418 265 8 27 433 81 491 1.74e-70 232
MS.gene38032.t1 MTR_1g094155 31.579 418 267 6 26 432 74 483 8.65e-70 230
MS.gene38032.t1 MTR_4g057600 33.571 420 254 8 31 436 84 492 4.59e-69 228
MS.gene38032.t1 MTR_2g095750 32.847 411 256 8 38 436 96 498 6.39e-67 223
MS.gene38032.t1 MTR_2g095730 32.067 421 261 9 32 436 84 495 1.48e-65 219
MS.gene38032.t1 MTR_1g050545 31.683 404 250 7 44 432 85 477 2.56e-64 215
MS.gene38032.t1 MTR_4g057570 31.175 417 264 7 32 433 79 487 2.16e-62 210
MS.gene38032.t1 MTR_1g021010 31.296 409 244 11 44 434 92 481 1.61e-52 184
MS.gene38032.t1 MTR_1g020090 30.147 408 247 10 44 434 106 492 7.78e-51 180
MS.gene38032.t1 MTR_2g095710 31.486 397 238 11 55 436 104 481 3.57e-50 177
MS.gene38032.t1 MTR_3g079560 31.250 416 248 12 44 442 94 488 2.28e-49 176
MS.gene38032.t1 MTR_1g021020 29.803 406 253 11 44 434 94 482 3.54e-49 175
MS.gene38032.t1 MTR_3g079590 31.051 409 245 12 44 433 94 484 5.64e-49 174
MS.gene38032.t1 MTR_3g079570 31.401 414 236 15 44 433 95 484 2.00e-47 170
MS.gene38032.t1 MTR_3g034290 29.227 414 258 14 36 429 82 480 2.15e-43 159
MS.gene38032.t1 MTR_0003s0560 30.048 416 240 14 45 433 90 481 3.08e-43 159
MS.gene38032.t1 MTR_3g079620 29.454 421 257 14 44 442 94 496 6.57e-43 158
MS.gene38032.t1 MTR_3g079600 29.481 424 260 14 44 446 92 497 1.03e-42 157
MS.gene38032.t1 MTR_1g095540 28.365 416 268 11 44 438 49 455 1.74e-42 156
MS.gene38032.t1 MTR_3g079630 28.710 411 260 11 44 433 94 492 8.41e-42 155
MS.gene38032.t1 MTR_1g095560 28.037 428 268 13 37 438 42 455 6.86e-41 152
MS.gene38032.t1 MTR_4g075150 28.169 426 260 12 44 438 50 460 1.04e-39 149
MS.gene38032.t1 MTR_4g075150 27.945 433 254 14 44 438 50 462 3.48e-39 147
MS.gene38032.t1 MTR_4g122960 27.126 435 266 11 37 433 48 469 2.10e-38 145
MS.gene38032.t1 MTR_4g056520 27.696 408 242 10 62 429 55 449 2.40e-38 145
MS.gene38032.t1 MTR_2g062980 27.475 404 254 13 44 422 56 445 4.09e-38 144
MS.gene38032.t1 MTR_4g122950 25.799 438 270 13 37 433 48 471 7.53e-38 144
MS.gene38032.t1 MTR_2g081620 26.066 422 259 13 44 433 57 457 3.32e-37 142
MS.gene38032.t1 MTR_2g062990 26.355 406 256 14 44 422 56 445 2.53e-36 139
MS.gene38032.t1 MTR_3g090130 25.701 428 285 12 36 438 36 455 7.31e-36 138
MS.gene38032.t1 MTR_3g090150 27.546 432 274 15 36 438 41 462 8.47e-36 138
MS.gene38032.t1 MTR_7g013790 28.140 430 257 16 44 438 51 463 1.76e-35 137
MS.gene38032.t1 MTR_1g095560 26.374 455 273 14 37 438 42 487 2.12e-35 137
MS.gene38032.t1 MTR_8g011350 24.089 494 287 17 2 422 1 479 3.18e-35 137
MS.gene38032.t1 MTR_2g018590 24.335 489 298 17 2 438 1 469 4.06e-35 136
MS.gene38032.t1 MTR_1g040370 26.292 445 289 15 2 438 1 414 7.84e-35 134
MS.gene38032.t1 MTR_2g018600 23.820 445 266 14 43 438 49 469 1.30e-34 135
MS.gene38032.t1 MTR_3g498755 27.088 443 280 14 22 433 9 439 1.77e-34 134
MS.gene38032.t1 MTR_2g063000 25.537 419 261 14 44 430 55 454 2.17e-34 134
MS.gene38032.t1 MTR_2g449850 27.295 403 254 14 46 422 56 445 3.63e-34 133
MS.gene38032.t1 MTR_7g021130 27.088 443 279 12 24 433 20 451 5.43e-34 133
MS.gene38032.t1 MTR_3g034290 28.994 338 211 12 36 354 82 409 5.85e-34 132
MS.gene38032.t1 MTR_5g072570 24.533 428 268 12 44 433 45 455 7.93e-34 132
MS.gene38032.t1 MTR_2g018630 25.463 432 268 12 43 438 52 465 1.47e-33 132
MS.gene38032.t1 MTR_4g089155 26.637 443 262 14 29 429 54 475 2.45e-33 131
MS.gene38032.t1 MTR_2g012850 27.230 426 259 14 44 434 51 460 5.82e-33 130
MS.gene38032.t1 MTR_8g099930 27.231 437 268 14 36 438 41 461 7.03e-33 130
MS.gene38032.t1 MTR_2g012860 26.351 444 266 14 36 438 49 472 1.02e-32 129
MS.gene38032.t1 MTR_0003s0560 39.665 179 96 6 45 218 90 261 1.78e-32 126
MS.gene38032.t1 MTR_4g021510 27.171 449 250 19 38 433 40 464 5.36e-32 127
MS.gene38032.t1 MTR_4g021535 26.105 475 272 17 11 433 14 461 7.28e-32 127
MS.gene38032.t1 MTR_8g011350 23.679 473 274 16 2 402 1 458 9.77e-32 127
MS.gene38032.t1 MTR_3g434850 25.786 477 290 19 2 438 1 453 1.35e-31 126
MS.gene38032.t1 MTR_3g100420 25.792 442 258 15 43 433 69 491 3.54e-31 125
MS.gene38032.t1 MTR_4g021520 26.136 440 266 15 38 433 41 465 5.38e-31 124
MS.gene38032.t1 MTR_4g021530 25.304 494 277 20 1 433 3 465 7.42e-30 121
MS.gene38032.t1 MTR_4g021490 25.740 439 269 16 38 433 41 465 2.03e-29 120
MS.gene38032.t1 MTR_2g009200 25.404 433 259 15 38 433 29 434 2.99e-29 119
MS.gene38032.t1 MTR_4g021500 25.517 435 256 15 43 433 490 900 4.06e-29 121
MS.gene38032.t1 MTR_4g021500 26.196 439 269 14 38 434 41 466 5.30e-29 120
MS.gene38032.t1 MTR_4g021500 26.196 439 269 14 38 434 41 466 4.73e-29 121
MS.gene38032.t1 MTR_4g021500 25.776 419 257 16 43 433 490 882 1.36e-27 116
MS.gene38032.t1 MTR_7g051430 34.123 211 123 7 16 215 14 219 1.20e-28 117
MS.gene38032.t1 MTR_2g084530 27.505 469 264 19 10 429 6 447 5.76e-28 115
MS.gene38032.t1 MTR_7g051430 34.123 211 123 7 16 215 14 219 6.34e-28 116
MS.gene38032.t1 MTR_7g080180 25.866 433 222 17 44 397 44 456 1.42e-27 115
MS.gene38032.t1 MTR_3g045770 23.644 461 299 16 7 432 6 448 1.43e-27 114
MS.gene38032.t1 MTR_7g080180 35.870 184 102 6 44 217 44 221 4.78e-27 114
MS.gene38032.t1 MTR_4g021535 24.831 443 271 16 11 433 14 414 2.07e-26 110
MS.gene38032.t1 MTR_4g021520 26.055 403 240 14 38 397 41 428 4.39e-26 110
MS.gene38032.t1 MTR_2g063000 23.775 408 235 15 44 422 55 415 1.06e-25 109
MS.gene38032.t1 MTR_2g018630 23.464 358 229 10 111 438 18 360 2.68e-20 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38032.t1 AT1G15000 57.957 421 168 5 35 453 28 441 9.87e-174 494
MS.gene38032.t1 AT3G10410 32.477 428 254 8 29 433 77 492 7.93e-70 230
MS.gene38032.t1 AT5G22980 32.010 403 256 6 44 436 100 494 6.93e-68 225
MS.gene38032.t1 AT3G45010 31.111 405 259 5 44 436 103 499 1.28e-66 222
MS.gene38032.t1 AT3G52000 30.827 399 244 10 45 425 81 465 1.31e-50 179
MS.gene38032.t1 AT3G52010 29.356 419 244 16 45 433 82 478 2.42e-44 162
MS.gene38032.t1 AT2G05850 30.144 418 243 17 45 433 81 478 1.81e-43 159
MS.gene38032.t1 AT3G63470 30.318 409 242 14 45 429 98 487 1.79e-42 157
MS.gene38032.t1 AT1G43780 26.226 469 298 12 11 438 8 469 1.05e-41 154
MS.gene38032.t1 AT3G07990 29.684 411 249 14 44 429 50 445 2.71e-41 153
MS.gene38032.t1 AT2G35770 28.058 417 249 12 36 422 46 441 4.69e-41 152
MS.gene38032.t1 AT2G35780 27.059 425 260 12 44 438 46 450 7.27e-41 152
MS.gene38032.t1 AT3G52020 26.651 424 267 16 36 433 87 492 1.35e-39 149
MS.gene38032.t1 AT5G08260 27.644 416 250 15 56 433 68 470 1.96e-37 143
MS.gene38032.t1 AT4G12910 28.947 456 239 20 34 422 44 481 2.10e-37 143
MS.gene38032.t1 AT5G23210 26.742 445 259 13 44 438 67 494 4.54e-37 142
MS.gene38032.t1 AT1G73270 25.476 420 271 12 43 442 48 445 4.79e-37 141
MS.gene38032.t1 AT3G12203 27.384 409 258 14 43 433 24 411 4.82e-36 138
MS.gene38032.t1 AT3G12203 27.384 409 258 14 43 433 45 432 6.65e-36 138
MS.gene38032.t1 AT1G61130 27.674 430 257 16 36 429 39 450 9.74e-36 138
MS.gene38032.t1 AT2G22990 24.878 410 270 14 43 433 38 428 1.77e-35 136
MS.gene38032.t1 AT1G73270 25.240 416 269 12 43 438 48 441 1.85e-35 137
MS.gene38032.t1 AT2G23010 25.366 410 270 12 43 433 40 432 4.63e-35 135
MS.gene38032.t1 AT3G17180 26.897 435 267 15 37 433 48 469 7.43e-35 135
MS.gene38032.t1 AT3G12203 27.595 395 247 14 57 433 1 374 8.96e-35 134
MS.gene38032.t1 AT2G23000 24.337 415 268 13 43 433 40 432 2.73e-34 133
MS.gene38032.t1 AT2G23000 24.337 415 268 13 43 433 40 432 2.73e-34 133
MS.gene38032.t1 AT1G73310 25.061 411 266 12 43 433 48 436 3.49e-34 133
MS.gene38032.t1 AT5G36180 24.634 410 269 11 43 433 48 436 3.60e-34 133
MS.gene38032.t1 AT1G73300 23.902 410 272 11 43 433 48 436 6.28e-34 132
MS.gene38032.t1 AT1G73300 23.902 410 272 11 43 433 48 436 6.28e-34 132
MS.gene38032.t1 AT4G30810 25.176 425 275 12 37 433 47 456 8.78e-34 132
MS.gene38032.t1 AT3G02110 29.009 424 250 15 36 422 45 454 1.08e-33 132
MS.gene38032.t1 AT1G73280 23.756 442 293 12 15 433 16 436 1.23e-33 132
MS.gene38032.t1 AT2G23010 24.878 410 272 12 43 433 40 432 2.28e-33 130
MS.gene38032.t1 AT2G27920 24.878 410 253 12 62 429 56 452 2.66e-33 131
MS.gene38032.t1 AT4G15100 25.959 443 264 14 36 433 52 475 3.65e-33 131
MS.gene38032.t1 AT2G22980 23.415 410 270 12 43 433 41 425 3.67e-33 130
MS.gene38032.t1 AT1G73290 24.634 410 267 12 43 433 47 433 3.80e-33 130
MS.gene38032.t1 AT1G11080 27.069 447 248 17 36 429 58 479 4.52e-33 130
MS.gene38032.t1 AT1G11080 27.069 447 248 17 36 429 58 479 5.05e-33 130
MS.gene38032.t1 AT2G22990 24.737 380 250 12 43 404 38 399 9.21e-33 129
MS.gene38032.t1 AT4G30610 27.880 434 270 18 36 438 40 461 1.33e-32 129
MS.gene38032.t1 AT2G22990 25.260 384 243 14 43 404 38 399 1.99e-32 128
MS.gene38032.t1 AT1G33540 24.194 434 278 12 43 438 44 464 2.25e-32 128
MS.gene38032.t1 AT2G22920 24.455 413 268 14 43 433 40 430 2.27e-32 128
MS.gene38032.t1 AT4G12910 28.605 430 223 19 34 397 44 455 2.86e-32 128
MS.gene38032.t1 AT3G12240 26.034 411 262 16 43 433 43 431 3.45e-32 127
MS.gene38032.t1 AT1G73310 24.742 388 252 10 43 411 48 414 6.16e-32 127
MS.gene38032.t1 AT2G22970 25.061 411 266 15 43 433 40 428 1.34e-31 125
MS.gene38032.t1 AT1G33540 24.130 431 276 12 46 438 4 421 1.50e-31 125
MS.gene38032.t1 AT2G33530 25.576 434 269 16 36 433 41 456 1.62e-31 126
MS.gene38032.t1 AT5G23210 27.632 380 213 12 44 373 67 434 2.81e-31 125
MS.gene38032.t1 AT1G28110 26.824 425 273 14 36 433 39 452 5.33e-31 124
MS.gene38032.t1 AT1G28110 26.824 425 273 14 36 433 39 452 5.33e-31 124
MS.gene38032.t1 AT3G25420 33.019 212 132 4 37 242 37 244 5.95e-31 125
MS.gene38032.t1 AT3G12230 26.277 411 261 17 43 433 42 430 5.97e-31 124
MS.gene38032.t1 AT2G22980 23.421 380 249 10 43 404 41 396 8.95e-31 123
MS.gene38032.t1 AT2G24010 25.641 429 277 13 36 438 38 450 1.11e-30 123
MS.gene38032.t1 AT2G22980 23.134 402 264 11 43 426 41 415 1.38e-30 123
MS.gene38032.t1 AT3G12220 25.485 412 263 16 43 433 42 430 2.45e-30 122
MS.gene38032.t1 AT2G22920 24.603 378 243 12 43 399 40 396 2.48e-30 122
MS.gene38032.t1 AT3G10450 23.716 409 274 9 43 433 44 432 2.88e-30 122
MS.gene38032.t1 AT1G73290 24.533 375 243 10 43 399 47 399 6.40e-30 120
MS.gene38032.t1 AT2G24000 27.751 418 260 16 36 422 38 444 1.23e-29 120
MS.gene38032.t1 AT3G10450 23.645 406 272 9 46 433 4 389 1.45e-29 119
MS.gene38032.t1 AT3G12220 25.428 409 261 16 46 433 15 400 1.62e-29 119
MS.gene38032.t1 AT3G56540 35.754 179 105 5 36 208 87 261 2.06e-29 116
MS.gene38032.t1 AT2G22990 23.704 405 272 14 43 433 38 419 3.19e-29 119
MS.gene38032.t1 AT2G22970 24.672 381 247 13 43 404 40 399 1.28e-28 117
MS.gene38032.t1 AT3G17180 26.933 401 243 15 37 400 48 435 1.61e-28 117
MS.gene38032.t1 AT2G22970 24.672 381 247 13 43 404 40 399 2.03e-28 117
MS.gene38032.t1 AT5G23210 25.369 406 239 12 83 438 8 399 9.40e-28 114
MS.gene38032.t1 AT5G42240 24.943 437 281 16 36 438 40 463 1.77e-27 114
MS.gene38032.t1 AT2G12480 24.510 408 279 15 36 433 39 427 3.03e-27 114
MS.gene38032.t1 AT5G23210 25.185 405 239 12 84 438 8 398 4.22e-27 112
MS.gene38032.t1 AT2G12480 23.645 406 283 13 36 433 39 425 4.53e-27 113
MS.gene38032.t1 AT2G12480 24.356 427 280 14 36 433 39 451 4.93e-27 113
MS.gene38032.t1 AT3G12220 24.561 399 231 14 43 433 42 378 1.14e-26 111
MS.gene38032.t1 AT2G27920 23.846 390 244 11 81 429 3 380 1.60e-26 110
MS.gene38032.t1 AT3G10450 23.810 378 250 9 43 402 44 401 2.15e-26 110
MS.gene38032.t1 AT5G42230 24.700 417 259 14 44 422 44 443 2.47e-26 111
MS.gene38032.t1 AT5G42230 24.700 417 259 14 44 422 44 443 2.47e-26 111
MS.gene38032.t1 AT2G24010 24.550 444 278 14 36 438 38 465 4.36e-26 110
MS.gene38032.t1 AT5G09640 24.051 474 304 15 2 433 1 460 7.38e-26 110
MS.gene38032.t1 AT3G10450 23.733 375 248 9 46 402 4 358 1.66e-25 107
MS.gene38032.t1 AT2G12480 23.587 407 283 14 36 433 39 426 1.84e-25 108
MS.gene38032.t1 AT5G36180 23.952 334 223 9 113 433 19 334 1.62e-24 104
MS.gene38032.t1 AT5G36180 23.952 334 223 9 113 433 19 334 1.62e-24 104
MS.gene38032.t1 AT2G24010 29.630 243 147 7 36 258 9 247 2.63e-23 101
MS.gene38032.t1 AT1G73280 22.156 334 229 9 113 433 19 334 1.01e-22 99.4
MS.gene38032.t1 AT2G22990 23.242 327 222 11 120 433 4 314 2.02e-22 97.8
MS.gene38032.t1 AT2G24010 23.241 469 278 15 36 438 9 461 7.61e-22 98.2
MS.gene38032.t1 AT1G73280 22.324 327 223 9 120 433 1 309 1.63e-21 95.1
MS.gene38032.t1 AT1G73280 23.939 330 218 8 43 354 48 362 1.80e-21 96.3
MS.gene38032.t1 AT1G73310 23.718 312 207 8 113 411 19 312 1.94e-21 95.1
MS.gene38032.t1 AT5G23210 25.215 349 202 11 84 382 8 347 2.35e-21 95.5
MS.gene38032.t1 AT5G36180 23.841 302 201 7 113 402 19 303 7.54e-21 93.6
MS.gene38032.t1 AT1G73290 26.250 240 155 5 43 275 47 271 8.44e-21 93.2
MS.gene38032.t1 AT2G22980 27.619 210 135 5 43 244 41 241 8.66e-21 94.0
MS.gene38032.t1 AT2G22990 22.630 327 224 11 120 433 4 314 8.87e-21 93.2
MS.gene38032.t1 AT2G22920 29.609 179 114 5 43 214 40 213 9.10e-20 90.1
MS.gene38032.t1 AT5G22960 30.539 167 91 3 32 195 21 165 9.50e-20 87.4
MS.gene38032.t1 AT5G36180 24.080 299 198 7 113 399 19 300 1.26e-19 90.1
MS.gene38032.t1 AT2G22970 25.436 287 181 10 43 310 40 312 5.79e-19 87.8
MS.gene38032.t1 AT2G27920 22.384 344 220 9 127 429 48 385 4.20e-18 86.3
MS.gene38032.t1 AT2G22980 21.959 296 196 8 120 402 4 277 2.24e-17 82.8

Find 111 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTACAAATGTTGTGGTTT+TGG 0.238119 5.1:+77462162 MS.gene38032:CDS
CATCGTCCTATTTATATTAC+TGG 0.245739 5.1:+77461449 MS.gene38032:CDS
CACAAACTCCGCTTCTCATT+TGG 0.273097 5.1:+77461165 MS.gene38032:CDS
CCGCTTCTCATTTGGCTTCA+AGG 0.275134 5.1:+77461173 MS.gene38032:CDS
TGAGTAATCATTTGGGTTAC+AGG 0.279504 5.1:-77461596 None:intergenic
TATCAGCATGAGTAATCATT+TGG 0.289581 5.1:-77461604 None:intergenic
AGGGAGATTTGGAAGGTAAA+TGG 0.303899 5.1:+77462106 MS.gene38032:CDS
AGAAATGTAGTAAAATTGTT+TGG 0.305716 5.1:+77461903 MS.gene38032:CDS
AATGAAAAGTGTAAAGTATA+TGG 0.327632 5.1:+77461946 MS.gene38032:CDS
AAAATATAGTATCCTATTGT+AGG 0.330922 5.1:-77461497 None:intergenic
GGAAAATTCCTTATGAAGAT+TGG 0.343169 5.1:+77461804 MS.gene38032:CDS
CTTTCACCAGTAATATAAAT+AGG 0.343527 5.1:-77461455 None:intergenic
AGTTGGTAGAGAGAAGGAAT+TGG 0.346714 5.1:+77461699 MS.gene38032:CDS
TGAATGCTGAGAGGGAGATT+TGG 0.347779 5.1:+77462095 MS.gene38032:CDS
CTCAAGCTATGATAGAAGAT+TGG 0.349871 5.1:+77462224 MS.gene38032:CDS
TGATGCGAGAAGCCGTGTTT+TGG 0.354009 5.1:+77461733 MS.gene38032:CDS
GGTGCTTGGAATAGAATCTT+TGG 0.358892 5.1:+77461284 MS.gene38032:CDS
GAAGTGGAGGTTAGACTTAC+TGG 0.360600 5.1:-77461092 None:intergenic
ATTTGGCTTCAAGGTGGCCC+TGG 0.366552 5.1:+77461182 MS.gene38032:CDS
CTTGATAATCCTATTGGAAC+TGG 0.368724 5.1:+77461317 MS.gene38032:CDS
TATGATAGAAGATTGGGTTT+TGG 0.369050 5.1:+77462231 MS.gene38032:CDS
TTCATAGAATGTGTAGAAAA+TGG 0.377408 5.1:-77461117 None:intergenic
GGAAAGTATATTCCTACAAT+AGG 0.393274 5.1:+77461485 MS.gene38032:CDS
GAAGCACTTCCCACAAAATC+AGG 0.402651 5.1:+77461062 MS.gene38032:CDS
AAATGAGTGTACTGATGAAC+AGG 0.408305 5.1:-77460977 None:intergenic
TCAAGCTATGATAGAAGATT+GGG 0.412951 5.1:+77462225 MS.gene38032:CDS
AAGCACCAGGGTTGGGTTGA+AGG 0.415075 5.1:-77461268 None:intergenic
GATGAGGTGAAGAAGGCCTT+AGG 0.416988 5.1:+77461851 MS.gene38032:CDS
ATGAAGATTGGTTGGTTGCT+CGG 0.418985 5.1:+77461816 MS.gene38032:CDS
GCTGGAGTGGCAATTGGTAA+TGG 0.423619 5.1:+77461563 MS.gene38032:CDS
GCTGATAATGCTTATTATGT+TGG 0.424749 5.1:+77461620 MS.gene38032:CDS
CTATTCCAAGCACCAGGGTT+GGG 0.425974 5.1:-77461275 None:intergenic
ATCAGCATGAGTAATCATTT+GGG 0.436334 5.1:-77461603 None:intergenic
AATTTAGCTGGAGTGGCAAT+TGG 0.438550 5.1:+77461557 MS.gene38032:CDS
TGTGTAGAAAATGGAGGAAG+TGG 0.442760 5.1:-77461108 None:intergenic
AGAAGCGGAGTTTGTGAGAG+AGG 0.443149 5.1:-77461158 None:intergenic
TTCAACCCAACCCTGGTGCT+TGG 0.445254 5.1:+77461270 MS.gene38032:CDS
AGTTATTGAAGGAGGAGATG+AGG 0.447309 5.1:+77461975 MS.gene38032:CDS
TCAAGGTCAGCGCGATTTGA+GGG 0.450151 5.1:+77462009 MS.gene38032:CDS
ATAGGACGATGTTTGAAAAC+AGG 0.451910 5.1:-77461437 None:intergenic
CCGACCATGGAGGAGCAGCC+AGG 0.453653 5.1:-77461200 None:intergenic
GTCGGCAACTTCTATGAACT+TGG 0.453972 5.1:+77461218 MS.gene38032:CDS
GTTATTGAAGGAGGAGATGA+GGG 0.455839 5.1:+77461976 MS.gene38032:CDS
GTGTTGTTCAAGTAGAGGCT+TGG 0.459918 5.1:+77462035 MS.gene38032:CDS
ATTACTGGTGAAAGTTATGC+TGG 0.460462 5.1:+77461464 MS.gene38032:CDS
GAAATGTAGTAAAATTGTTT+GGG 0.465315 5.1:+77461904 MS.gene38032:CDS
AGTGAATTGGTGACACGATA+AGG 0.468831 5.1:-77461242 None:intergenic
TGGCCCTGGCTGCTCCTCCA+TGG 0.469044 5.1:+77461196 MS.gene38032:CDS
CTACTTTGTATGATTATTCG+CGG 0.473157 5.1:+77461783 MS.gene38032:CDS
TGTTGTTCAAGTAGAGGCTT+GGG 0.474736 5.1:+77462036 MS.gene38032:CDS
GATCTGTTGCAAAACATGAC+AGG 0.477010 5.1:+77461755 MS.gene38032:CDS
GAATTCAAAGGTTGATCAGC+AGG 0.480763 5.1:-77462202 None:intergenic
CTGTTGAGTTGGTAGAGAGA+AGG 0.481527 5.1:+77461693 MS.gene38032:CDS
AATTCCTTATGAAGATTGGT+TGG 0.482510 5.1:+77461808 MS.gene38032:CDS
ACTGAAAGAGTGAATTTAGC+TGG 0.484138 5.1:+77461545 MS.gene38032:CDS
ATGAGGTGAAGAAGGCCTTA+GGG 0.484964 5.1:+77461852 MS.gene38032:CDS
GCGACTGCAGTTTGATCGGT+TGG 0.486686 5.1:-77461371 None:intergenic
ACACTGAAGCCAGTTCCAAT+AGG 0.487303 5.1:-77461326 None:intergenic
GGGTTGAAGGGTGAGTGAAT+TGG 0.492539 5.1:-77461255 None:intergenic
ATCAAGGTCAGCGCGATTTG+AGG 0.495996 5.1:+77462008 MS.gene38032:CDS
TATGGTAGAGAAGTTATTGA+AGG 0.501796 5.1:+77461964 MS.gene38032:CDS
AGAATGTGAGACTGAGAAAG+AGG 0.503750 5.1:-77461024 None:intergenic
AGTTTGTGAGAGAGGTGAAG+TGG 0.506134 5.1:-77461150 None:intergenic
AAGATTCTATTCCAAGCACC+AGG 0.515779 5.1:-77461281 None:intergenic
AGAGGTATGAAACTGTAAGA+AGG 0.518279 5.1:-77461006 None:intergenic
CTCCGCGACTGCAGTTTGAT+CGG 0.519995 5.1:-77461375 None:intergenic
GCAACCAACCAATCTTCATA+AGG 0.523503 5.1:-77461812 None:intergenic
AGCACCAGGGTTGGGTTGAA+GGG 0.527891 5.1:-77461267 None:intergenic
CGACCATGGAGGAGCAGCCA+GGG 0.532443 5.1:-77461199 None:intergenic
TTCATAGAAGTTGCCGACCA+TGG 0.534313 5.1:-77461213 None:intergenic
GAATATTGATGAGGTGAAGA+AGG 0.536580 5.1:+77461844 MS.gene38032:CDS
ATGAGGGTGTTGTTGTATCA+AGG 0.538392 5.1:+77461992 MS.gene38032:CDS
GGTAGAGAAGTTATTGAAGG+AGG 0.540034 5.1:+77461967 MS.gene38032:CDS
AAGGTAAATGGAGAGGTAGC+TGG 0.540195 5.1:+77462118 MS.gene38032:CDS
TCAACTTGAAGCTGTTGAGT+TGG 0.544742 5.1:+77461682 MS.gene38032:CDS
TCAAGAAATTCTGTGTATGA+TGG 0.545978 5.1:+77462292 MS.gene38032:CDS
CCTGGCTGCTCCTCCATGGT+CGG 0.546386 5.1:+77461200 MS.gene38032:CDS
TGATCGGTTGGAATCTCTTG+CGG 0.548717 5.1:-77461359 None:intergenic
TCTATTCCAAGCACCAGGGT+TGG 0.552088 5.1:-77461276 None:intergenic
ATCATAGCTTGAGAATTCAA+AGG 0.554096 5.1:-77462214 None:intergenic
TTTGTGGGAAGTGCTTCATT+GGG 0.555241 5.1:-77461056 None:intergenic
CATAGATTAGATGATGAAGA+AGG 0.563825 5.1:+77460941 None:intergenic
ATCTGTTGCAAAACATGACA+GGG 0.572050 5.1:+77461756 MS.gene38032:CDS
GGTCGGTGTTGTTCAAGTAG+AGG 0.576352 5.1:+77462030 MS.gene38032:CDS
TGAAGACTATGAAGTGGGAA+GGG 0.578533 5.1:+77462059 MS.gene38032:CDS
TTCATCAACATTCACCCCTA+AGG 0.579891 5.1:-77461867 None:intergenic
AACCGATCAAACTGCAGTCG+CGG 0.581865 5.1:+77461373 MS.gene38032:CDS
AAGAGTGAATTTAGCTGGAG+TGG 0.582686 5.1:+77461550 MS.gene38032:CDS
CTTCTCATTTGGCTTCAAGG+TGG 0.585182 5.1:+77461176 MS.gene38032:CDS
GAAGTCACTTACAAATGTTG+TGG 0.585885 5.1:+77462156 MS.gene38032:CDS
GTGAAGACTATGAAGTGGGA+AGG 0.588138 5.1:+77462058 MS.gene38032:CDS
TGAGAGGCAGAAGAATGAGA+TGG 0.589807 5.1:+77461652 MS.gene38032:CDS
GGTCAGCGCGATTTGAGGGT+CGG 0.591816 5.1:+77462013 MS.gene38032:CDS
TGCTGAGAGGGAGATTTGGA+AGG 0.592166 5.1:+77462099 MS.gene38032:CDS
GATTTGGAAGGTAAATGGAG+AGG 0.595537 5.1:+77462111 MS.gene38032:CDS
CTCACCCTTCAACCCAACCC+TGG 0.596574 5.1:+77461263 MS.gene38032:CDS
GAGTAATCATTTGGGTTACA+GGG 0.616486 5.1:-77461595 None:intergenic
ATAGAATGTGTAGAAAATGG+AGG 0.624076 5.1:-77461114 None:intergenic
CCTTGAAGCCAAATGAGAAG+CGG 0.625678 5.1:-77461173 None:intergenic
TTGGGTGAAGACTATGAAGT+GGG 0.627868 5.1:+77462054 MS.gene38032:CDS
GTAGAAAATGGAGGAAGTGG+AGG 0.629071 5.1:-77461105 None:intergenic
CTTGGGTGAAGACTATGAAG+TGG 0.631263 5.1:+77462053 MS.gene38032:CDS
ATGTTGGATTGATCAATGAG+AGG 0.638224 5.1:+77461636 MS.gene38032:CDS
TCGGTTCTTGAATATTGATG+AGG 0.651459 5.1:+77461835 MS.gene38032:CDS
TGAGGTGAAGAAGGCCTTAG+GGG 0.657656 5.1:+77461853 MS.gene38032:CDS
TGGAGGTTAGACTTACTGGT+AGG 0.663923 5.1:-77461088 None:intergenic
TTTGCAACAGATCCAAAACA+CGG 0.674823 5.1:-77461745 None:intergenic
AGATTCTATTCCAAGCACCA+GGG 0.689174 5.1:-77461280 None:intergenic
ATAGAAGTTGCCGACCATGG+AGG 0.735246 5.1:-77461210 None:intergenic
AATGAGTGTACTGATGAACA+GGG 0.810752 5.1:-77460976 None:intergenic
GAGTGTACTGATGAACAGGG+TGG 0.842676 5.1:-77460973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAGTATCCTATTGT+AGG - chr5.1:77461500-77461519 None:intergenic 20.0%
!! AGAAATGTAGTAAAATTGTT+TGG + chr5.1:77461903-77461922 MS.gene38032:CDS 20.0%
!! GAAATGTAGTAAAATTGTTT+GGG + chr5.1:77461904-77461923 MS.gene38032:CDS 20.0%
!!! AATGAAAAGTGTAAAGTATA+TGG + chr5.1:77461946-77461965 MS.gene38032:CDS 20.0%
! CTTTCACCAGTAATATAAAT+AGG - chr5.1:77461458-77461477 None:intergenic 25.0%
! TAGGATTATCAAGAAAAACA+AGG - chr5.1:77461310-77461329 None:intergenic 25.0%
! TTCATAGAATGTGTAGAAAA+TGG - chr5.1:77461120-77461139 None:intergenic 25.0%
!!! GTTTTTCTTGATAATCCTAT+TGG + chr5.1:77461311-77461330 MS.gene38032:CDS 25.0%
AATTCCTTATGAAGATTGGT+TGG + chr5.1:77461808-77461827 MS.gene38032:CDS 30.0%
ATAGAATGTGTAGAAAATGG+AGG - chr5.1:77461117-77461136 None:intergenic 30.0%
ATCAGCATGAGTAATCATTT+GGG - chr5.1:77461606-77461625 None:intergenic 30.0%
ATCATAGCTTGAGAATTCAA+AGG - chr5.1:77462217-77462236 None:intergenic 30.0%
CATCGTCCTATTTATATTAC+TGG + chr5.1:77461449-77461468 MS.gene38032:CDS 30.0%
CTACTTTGTATGATTATTCG+CGG + chr5.1:77461783-77461802 MS.gene38032:CDS 30.0%
GGAAAATTCCTTATGAAGAT+TGG + chr5.1:77461804-77461823 MS.gene38032:CDS 30.0%
TAGCTGGTTATGTACAAAAA+TGG + chr5.1:77462134-77462153 MS.gene38032:CDS 30.0%
TATCAGCATGAGTAATCATT+TGG - chr5.1:77461607-77461626 None:intergenic 30.0%
TATGGTAGAGAAGTTATTGA+AGG + chr5.1:77461964-77461983 MS.gene38032:CDS 30.0%
TCAAGAAATTCTGTGTATGA+TGG + chr5.1:77462292-77462311 MS.gene38032:CDS 30.0%
TCAAGCTATGATAGAAGATT+GGG + chr5.1:77462225-77462244 MS.gene38032:CDS 30.0%
! ACTTACAAATGTTGTGGTTT+TGG + chr5.1:77462162-77462181 MS.gene38032:CDS 30.0%
! ATCTTTTCACTGCTATAACA+AGG + chr5.1:77461399-77461418 MS.gene38032:CDS 30.0%
! CTTACAAATGTTGTGGTTTT+GGG + chr5.1:77462163-77462182 MS.gene38032:CDS 30.0%
! GCTGATAATGCTTATTATGT+TGG + chr5.1:77461620-77461639 MS.gene38032:CDS 30.0%
! GGAAAGTATATTCCTACAAT+AGG + chr5.1:77461485-77461504 MS.gene38032:CDS 30.0%
! TATGATAGAAGATTGGGTTT+TGG + chr5.1:77462231-77462250 MS.gene38032:CDS 30.0%
!! TTACAAATGTTGTGGTTTTG+GGG + chr5.1:77462164-77462183 MS.gene38032:CDS 30.0%
ACTGAAAGAGTGAATTTAGC+TGG + chr5.1:77461545-77461564 MS.gene38032:CDS 35.0%
ATAGGACGATGTTTGAAAAC+AGG - chr5.1:77461440-77461459 None:intergenic 35.0%
ATCTGTTGCAAAACATGACA+GGG + chr5.1:77461756-77461775 MS.gene38032:CDS 35.0%
ATGTTGGATTGATCAATGAG+AGG + chr5.1:77461636-77461655 MS.gene38032:CDS 35.0%
ATTACTGGTGAAAGTTATGC+TGG + chr5.1:77461464-77461483 MS.gene38032:CDS 35.0%
CTCAAGCTATGATAGAAGAT+TGG + chr5.1:77462224-77462243 MS.gene38032:CDS 35.0%
GAAGTCACTTACAAATGTTG+TGG + chr5.1:77462156-77462175 MS.gene38032:CDS 35.0%
GAATATTGATGAGGTGAAGA+AGG + chr5.1:77461844-77461863 MS.gene38032:CDS 35.0%
TCGGTTCTTGAATATTGATG+AGG + chr5.1:77461835-77461854 MS.gene38032:CDS 35.0%
TTTGCAACAGATCCAAAACA+CGG - chr5.1:77461748-77461767 None:intergenic 35.0%
! AAATGAGTGTACTGATGAAC+AGG - chr5.1:77460980-77460999 None:intergenic 35.0%
! AATGAGTGTACTGATGAACA+GGG - chr5.1:77460979-77460998 None:intergenic 35.0%
! AGAATTTTGTGAATGCTGAG+AGG + chr5.1:77462086-77462105 MS.gene38032:CDS 35.0%
! AGAGGTATGAAACTGTAAGA+AGG - chr5.1:77461009-77461028 None:intergenic 35.0%
! CTTGATAATCCTATTGGAAC+TGG + chr5.1:77461317-77461336 MS.gene38032:CDS 35.0%
! GAATTTTGTGAATGCTGAGA+GGG + chr5.1:77462087-77462106 MS.gene38032:CDS 35.0%
! GAGTAATCATTTGGGTTACA+GGG - chr5.1:77461598-77461617 None:intergenic 35.0%
! TGAGTAATCATTTGGGTTAC+AGG - chr5.1:77461599-77461618 None:intergenic 35.0%
!!! AGAAGATTGGGTTTTGGAAA+AGG + chr5.1:77462237-77462256 MS.gene38032:CDS 35.0%
!!! GAAGATTGGGTTTTGGAAAA+GGG + chr5.1:77462238-77462257 MS.gene38032:CDS 35.0%
!!! GTTTTGGAAAAGGGTTTGTT+TGG + chr5.1:77462247-77462266 MS.gene38032:CDS 35.0%
!!! TACAAATGTTGTGGTTTTGG+GGG + chr5.1:77462165-77462184 MS.gene38032:CDS 35.0%
AAGAGTGAATTTAGCTGGAG+TGG + chr5.1:77461550-77461569 MS.gene38032:CDS 40.0%
AAGATTCTATTCCAAGCACC+AGG - chr5.1:77461284-77461303 None:intergenic 40.0%
AATTTAGCTGGAGTGGCAAT+TGG + chr5.1:77461557-77461576 MS.gene38032:CDS 40.0%
AGAATGTGAGACTGAGAAAG+AGG - chr5.1:77461027-77461046 None:intergenic 40.0%
AGATTCTATTCCAAGCACCA+GGG - chr5.1:77461283-77461302 None:intergenic 40.0%
AGGGAGATTTGGAAGGTAAA+TGG + chr5.1:77462106-77462125 MS.gene38032:CDS 40.0%
AGTTATTGAAGGAGGAGATG+AGG + chr5.1:77461975-77461994 MS.gene38032:CDS 40.0%
GATCTGTTGCAAAACATGAC+AGG + chr5.1:77461755-77461774 MS.gene38032:CDS 40.0%
GATTTGGAAGGTAAATGGAG+AGG + chr5.1:77462111-77462130 MS.gene38032:CDS 40.0%
GCAACCAACCAATCTTCATA+AGG - chr5.1:77461815-77461834 None:intergenic 40.0%
GGTAGAGAAGTTATTGAAGG+AGG + chr5.1:77461967-77461986 MS.gene38032:CDS 40.0%
GGTGCTTGGAATAGAATCTT+TGG + chr5.1:77461284-77461303 MS.gene38032:CDS 40.0%
GTTATTGAAGGAGGAGATGA+GGG + chr5.1:77461976-77461995 MS.gene38032:CDS 40.0%
TCAACTTGAAGCTGTTGAGT+TGG + chr5.1:77461682-77461701 MS.gene38032:CDS 40.0%
TGAAGACTATGAAGTGGGAA+GGG + chr5.1:77462059-77462078 MS.gene38032:CDS 40.0%
TGTGTAGAAAATGGAGGAAG+TGG - chr5.1:77461111-77461130 None:intergenic 40.0%
TGTTGTTCAAGTAGAGGCTT+GGG + chr5.1:77462036-77462055 MS.gene38032:CDS 40.0%
TTCATCAACATTCACCCCTA+AGG - chr5.1:77461870-77461889 None:intergenic 40.0%
TTGGGTGAAGACTATGAAGT+GGG + chr5.1:77462054-77462073 MS.gene38032:CDS 40.0%
! AGTGAATTGGTGACACGATA+AGG - chr5.1:77461245-77461264 None:intergenic 40.0%
! ATGAAGATTGGTTGGTTGCT+CGG + chr5.1:77461816-77461835 MS.gene38032:CDS 40.0%
! GAATTCAAAGGTTGATCAGC+AGG - chr5.1:77462205-77462224 None:intergenic 40.0%
! GGTAGGTAACCTGATTTTGT+GGG - chr5.1:77461074-77461093 None:intergenic 40.0%
! TGGTAGGTAACCTGATTTTG+TGG - chr5.1:77461075-77461094 None:intergenic 40.0%
!! AGTTGGTAGAGAGAAGGAAT+TGG + chr5.1:77461699-77461718 MS.gene38032:CDS 40.0%
!! ATGAGGGTGTTGTTGTATCA+AGG + chr5.1:77461992-77462011 MS.gene38032:CDS 40.0%
!! TTTGTGGGAAGTGCTTCATT+GGG - chr5.1:77461059-77461078 None:intergenic 40.0%
!!! ACAAATGTTGTGGTTTTGGG+GGG + chr5.1:77462166-77462185 MS.gene38032:CDS 40.0%
!!! TTTTGTGGGAAGTGCTTCAT+TGG - chr5.1:77461060-77461079 None:intergenic 40.0%
AAGGTAAATGGAGAGGTAGC+TGG + chr5.1:77462118-77462137 MS.gene38032:CDS 45.0%
ACACTGAAGCCAGTTCCAAT+AGG - chr5.1:77461329-77461348 None:intergenic 45.0%
AGTTTGTGAGAGAGGTGAAG+TGG - chr5.1:77461153-77461172 None:intergenic 45.0%
ATGAGGTGAAGAAGGCCTTA+GGG + chr5.1:77461852-77461871 MS.gene38032:CDS 45.0%
CACAAACTCCGCTTCTCATT+TGG + chr5.1:77461165-77461184 MS.gene38032:CDS 45.0%
CCTTGAAGCCAAATGAGAAG+CGG - chr5.1:77461176-77461195 None:intergenic 45.0%
CTTGGGTGAAGACTATGAAG+TGG + chr5.1:77462053-77462072 MS.gene38032:CDS 45.0%
GAAGTGGAGGTTAGACTTAC+TGG - chr5.1:77461095-77461114 None:intergenic 45.0%
GTAGAAAATGGAGGAAGTGG+AGG - chr5.1:77461108-77461127 None:intergenic 45.0%
GTCGGCAACTTCTATGAACT+TGG + chr5.1:77461218-77461237 MS.gene38032:CDS 45.0%
GTGAAGACTATGAAGTGGGA+AGG + chr5.1:77462058-77462077 MS.gene38032:CDS 45.0%
TGAATGCTGAGAGGGAGATT+TGG + chr5.1:77462095-77462114 MS.gene38032:CDS 45.0%
TGAGAGGCAGAAGAATGAGA+TGG + chr5.1:77461652-77461671 MS.gene38032:CDS 45.0%
TGATCGGTTGGAATCTCTTG+CGG - chr5.1:77461362-77461381 None:intergenic 45.0%
TGGAGGTTAGACTTACTGGT+AGG - chr5.1:77461091-77461110 None:intergenic 45.0%
TTCATAGAAGTTGCCGACCA+TGG - chr5.1:77461216-77461235 None:intergenic 45.0%
! CTTCTCATTTGGCTTCAAGG+TGG + chr5.1:77461176-77461195 MS.gene38032:CDS 45.0%
! GAAGCACTTCCCACAAAATC+AGG + chr5.1:77461062-77461081 MS.gene38032:CDS 45.0%
! GTGTTGTTCAAGTAGAGGCT+TGG + chr5.1:77462035-77462054 MS.gene38032:CDS 45.0%
!! CTGTTGAGTTGGTAGAGAGA+AGG + chr5.1:77461693-77461712 MS.gene38032:CDS 45.0%
AACCGATCAAACTGCAGTCG+CGG + chr5.1:77461373-77461392 MS.gene38032:CDS 50.0%
AGAAGCGGAGTTTGTGAGAG+AGG - chr5.1:77461161-77461180 None:intergenic 50.0%
ATAGAAGTTGCCGACCATGG+AGG - chr5.1:77461213-77461232 None:intergenic 50.0%
ATCAAGGTCAGCGCGATTTG+AGG + chr5.1:77462008-77462027 MS.gene38032:CDS 50.0%
CTATTCCAAGCACCAGGGTT+GGG - chr5.1:77461278-77461297 None:intergenic 50.0%
GATGAGGTGAAGAAGGCCTT+AGG + chr5.1:77461851-77461870 MS.gene38032:CDS 50.0%
GCTGGAGTGGCAATTGGTAA+TGG + chr5.1:77461563-77461582 MS.gene38032:CDS 50.0%
GGGTTGAAGGGTGAGTGAAT+TGG - chr5.1:77461258-77461277 None:intergenic 50.0%
TCAAGGTCAGCGCGATTTGA+GGG + chr5.1:77462009-77462028 MS.gene38032:CDS 50.0%
TCTATTCCAAGCACCAGGGT+TGG - chr5.1:77461279-77461298 None:intergenic 50.0%
TGAGGTGAAGAAGGCCTTAG+GGG + chr5.1:77461853-77461872 MS.gene38032:CDS 50.0%
TGCTGAGAGGGAGATTTGGA+AGG + chr5.1:77462099-77462118 MS.gene38032:CDS 50.0%
! CCGCTTCTCATTTGGCTTCA+AGG + chr5.1:77461173-77461192 MS.gene38032:CDS 50.0%
! GAGTGTACTGATGAACAGGG+TGG - chr5.1:77460976-77460995 None:intergenic 50.0%
! TGATGCGAGAAGCCGTGTTT+TGG + chr5.1:77461733-77461752 MS.gene38032:CDS 50.0%
!! GGTCGGTGTTGTTCAAGTAG+AGG + chr5.1:77462030-77462049 MS.gene38032:CDS 50.0%
!!! AATGTTGTGGTTTTGGGGGG+TGG + chr5.1:77462169-77462188 MS.gene38032:CDS 50.0%
CTCCGCGACTGCAGTTTGAT+CGG - chr5.1:77461378-77461397 None:intergenic 55.0%
GCGACTGCAGTTTGATCGGT+TGG - chr5.1:77461374-77461393 None:intergenic 55.0%
TTCAACCCAACCCTGGTGCT+TGG + chr5.1:77461270-77461289 MS.gene38032:CDS 55.0%
! ATTTGGCTTCAAGGTGGCCC+TGG + chr5.1:77461182-77461201 MS.gene38032:CDS 55.0%
!! AAGCACCAGGGTTGGGTTGA+AGG - chr5.1:77461271-77461290 None:intergenic 55.0%
!! AGCACCAGGGTTGGGTTGAA+GGG - chr5.1:77461270-77461289 None:intergenic 55.0%
CTCACCCTTCAACCCAACCC+TGG + chr5.1:77461263-77461282 MS.gene38032:CDS 60.0%
GGTCAGCGCGATTTGAGGGT+CGG + chr5.1:77462013-77462032 MS.gene38032:CDS 60.0%
CCTGGCTGCTCCTCCATGGT+CGG + chr5.1:77461200-77461219 MS.gene38032:CDS 65.0%
CGACCATGGAGGAGCAGCCA+GGG - chr5.1:77461202-77461221 None:intergenic 65.0%
CCGACCATGGAGGAGCAGCC+AGG - chr5.1:77461203-77461222 None:intergenic 70.0%
TGGCCCTGGCTGCTCCTCCA+TGG + chr5.1:77461196-77461215 MS.gene38032:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 77460951 77462318 77460951 ID=MS.gene38032
chr5.1 mRNA 77460951 77462318 77460951 ID=MS.gene38032.t1;Parent=MS.gene38032
chr5.1 exon 77460951 77462318 77460951 ID=MS.gene38032.t1.exon1;Parent=MS.gene38032.t1
chr5.1 CDS 77460951 77462318 77460951 ID=cds.MS.gene38032.t1;Parent=MS.gene38032.t1
Gene Sequence

>MS.gene38032

ATGATGAAGAAGGAAGACTCAACCACCCTGTTCATCAGTACACTCATTTTCTTCTCCTTCTTACAGTTTCATACCTCTTTCTCAGTCTCACATTCTTCAACATTTCCCAATGAAGCACTTCCCACAAAATCAGGTTACCTACCAGTAAGTCTAACCTCCACTTCCTCCATTTTCTACACATTCTATGAAGCACAGAACTCCACTTCACCTCTCTCACAAACTCCGCTTCTCATTTGGCTTCAAGGTGGCCCTGGCTGCTCCTCCATGGTCGGCAACTTCTATGAACTTGGACCTTATCGTGTCACCAATTCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTGTTTTTCTTGATAATCCTATTGGAACTGGCTTCAGTGTAGCTTCAACGCCGCAAGAGATTCCAACCGATCAAACTGCAGTCGCGGAGCATCTTTTCACTGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTCAAACATCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGAAAGTATATTCCTACAATAGGATACTATATTTTAGAGAAGAATGCTAAGTTGAAAAACACTGAAAGAGTGAATTTAGCTGGAGTGGCAATTGGTAATGGACTAACAGACCCTGTAACCCAAATGATTACTCATGCTGATAATGCTTATTATGTTGGATTGATCAATGAGAGGCAGAAGAATGAGATGGAAAAACTTCAACTTGAAGCTGTTGAGTTGGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGAGAAGCCGTGTTTTGGATCTGTTGCAAAACATGACAGGGTTTGCTACTTTGTATGATTATTCGCGGAAAATTCCTTATGAAGATTGGTTGGTTGCTCGGTTCTTGAATATTGATGAGGTGAAGAAGGCCTTAGGGGTGAATGTTGATGAATCATTTGTTTATGAGAAATGTAGTAAAATTGTTTGGGCTGCATTGCATGCTGATTTAATGAAAAGTGTAAAGTATATGGTAGAGAAGTTATTGAAGGAGGAGATGAGGGTGTTGTTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTTGTTCAAGTAGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATTGAGAATTTTGTGAATGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCACTTACAAATGTTGTGGTTTTGGGGGGTGGTCATCTTTTGCCTGCTGATCAACCTTTGAATTCTCAAGCTATGATAGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTCTTATCGAAATGTATCAAGAAATTCTGTGTATGATGGATGA
Protein sequence

>MS.gene38032.t1

MMKKEDSTTLFISTLIFFSFLQFHTSFSVSHSSTFPNEALPTKSGYLPVSLTSTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMVGNFYELGPYRVTNSLTLQPNPGAWNRIFGLVFLDNPIGTGFSVASTPQEIPTDQTAVAEHLFTAITRFVQLDPVFKHRPIYITGESYAGKYIPTIGYYILEKNAKLKNTERVNLAGVAIGNGLTDPVTQMITHADNAYYVGLINERQKNEMEKLQLEAVELVERRNWSEATDARSRVLDLLQNMTGFATLYDYSRKIPYEDWLVARFLNIDEVKKALGVNVDESFVYEKCSKIVWAALHADLMKSVKYMVEKLLKEEMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIENFVNAEREIWKVNGEVAGYVQKWKSLTNVVVLGGGHLLPADQPLNSQAMIEDWVLEKGLFGSVSYRNVSRNSVYDG