AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81246

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81246.t1 MTR_5g097180 95.175 456 20 2 1 455 1 455 0.0 886
MS.gene81246.t1 MTR_4g084710 81.718 454 80 2 4 454 2 455 0.0 746
MS.gene81246.t1 MTR_4g057585 32.759 406 256 7 38 433 92 490 1.29e-71 234
MS.gene81246.t1 MTR_4g057595 32.266 406 258 7 38 433 93 491 3.81e-70 231
MS.gene81246.t1 MTR_1g094155 31.579 418 267 6 26 432 74 483 1.10e-69 229
MS.gene81246.t1 MTR_4g057600 33.571 420 254 8 31 436 84 492 6.64e-69 228
MS.gene81246.t1 MTR_2g095750 33.090 411 255 8 38 436 96 498 8.63e-68 225
MS.gene81246.t1 MTR_2g095730 32.857 420 259 9 32 436 84 495 8.44e-67 222
MS.gene81246.t1 MTR_1g050545 32.178 404 248 7 44 432 85 477 4.81e-64 214
MS.gene81246.t1 MTR_4g057570 31.655 417 262 7 32 433 79 487 3.70e-63 212
MS.gene81246.t1 MTR_1g021010 31.540 409 243 11 44 434 92 481 5.53e-53 185
MS.gene81246.t1 MTR_1g020090 30.882 408 244 10 44 434 106 492 2.72e-52 184
MS.gene81246.t1 MTR_2g095710 31.311 412 250 11 38 436 90 481 7.91e-51 179
MS.gene81246.t1 MTR_1g021020 30.049 406 252 11 44 434 94 482 1.06e-49 176
MS.gene81246.t1 MTR_3g079560 31.490 416 247 12 44 442 94 488 1.39e-49 176
MS.gene81246.t1 MTR_3g079590 31.296 409 244 12 44 433 94 484 4.06e-49 175
MS.gene81246.t1 MTR_3g079570 31.643 414 235 15 44 433 95 484 4.93e-47 169
MS.gene81246.t1 MTR_0003s0560 29.976 417 239 14 45 433 90 481 1.47e-43 160
MS.gene81246.t1 MTR_3g034290 29.950 404 250 14 45 429 91 480 2.63e-43 159
MS.gene81246.t1 MTR_3g079620 30.166 421 254 14 44 442 94 496 4.47e-43 159
MS.gene81246.t1 MTR_3g079600 29.953 424 258 14 44 446 92 497 9.13e-43 158
MS.gene81246.t1 MTR_1g095540 28.606 416 267 11 44 438 49 455 1.51e-42 156
MS.gene81246.t1 MTR_3g079630 28.954 411 259 11 44 433 94 492 3.72e-42 156
MS.gene81246.t1 MTR_1g095560 28.504 421 261 13 44 438 49 455 2.56e-40 150
MS.gene81246.t1 MTR_4g075150 28.404 426 259 13 44 438 50 460 6.83e-39 146
MS.gene81246.t1 MTR_2g062980 27.518 407 250 13 44 422 56 445 1.24e-38 146
MS.gene81246.t1 MTR_4g075150 27.546 432 257 12 44 438 50 462 2.13e-38 145
MS.gene81246.t1 MTR_2g081620 26.366 421 259 12 44 433 57 457 2.59e-38 145
MS.gene81246.t1 MTR_4g122960 26.168 428 265 12 44 433 55 469 2.38e-37 142
MS.gene81246.t1 MTR_2g062990 26.847 406 254 14 44 422 56 445 2.50e-37 142
MS.gene81246.t1 MTR_4g122950 25.290 431 267 12 44 433 55 471 3.91e-37 142
MS.gene81246.t1 MTR_4g056520 26.961 408 245 10 62 429 55 449 1.21e-36 140
MS.gene81246.t1 MTR_3g090130 26.905 420 274 12 44 438 44 455 1.64e-36 140
MS.gene81246.t1 MTR_8g011350 25.934 455 249 16 40 422 41 479 1.52e-35 138
MS.gene81246.t1 MTR_2g018630 26.291 426 272 11 43 438 52 465 2.12e-35 137
MS.gene81246.t1 MTR_7g013790 27.907 430 258 16 44 438 51 463 2.51e-35 137
MS.gene81246.t1 MTR_3g090150 27.674 430 260 15 44 438 49 462 2.52e-35 137
MS.gene81246.t1 MTR_2g063000 26.190 420 257 14 44 430 55 454 4.03e-35 136
MS.gene81246.t1 MTR_1g095560 26.786 448 266 14 44 438 49 487 7.01e-35 136
MS.gene81246.t1 MTR_2g449850 27.543 403 253 14 46 422 56 445 1.18e-34 135
MS.gene81246.t1 MTR_3g498755 27.316 421 263 14 44 433 31 439 1.34e-34 134
MS.gene81246.t1 MTR_1g040370 27.612 402 251 13 44 438 46 414 2.13e-34 133
MS.gene81246.t1 MTR_7g021130 26.984 441 282 11 24 433 20 451 2.88e-34 134
MS.gene81246.t1 MTR_2g018590 24.661 442 267 15 43 438 48 469 3.81e-34 133
MS.gene81246.t1 MTR_5g072570 25.943 424 267 11 44 433 45 455 4.05e-34 133
MS.gene81246.t1 MTR_3g034290 29.878 328 203 12 45 354 91 409 5.19e-34 132
MS.gene81246.t1 MTR_2g018600 24.091 440 271 14 43 438 49 469 1.29e-33 132
MS.gene81246.t1 MTR_8g099930 26.606 436 272 14 36 438 41 461 7.91e-33 130
MS.gene81246.t1 MTR_0003s0560 40.000 180 96 6 45 219 90 262 8.99e-33 127
MS.gene81246.t1 MTR_4g089155 26.411 443 263 14 29 429 54 475 9.75e-33 130
MS.gene81246.t1 MTR_4g021535 27.215 474 278 19 6 433 9 461 1.38e-32 129
MS.gene81246.t1 MTR_2g012850 26.995 426 260 14 44 434 51 460 3.09e-32 128
MS.gene81246.t1 MTR_2g012860 27.594 424 244 15 44 425 57 459 3.90e-32 128
MS.gene81246.t1 MTR_4g021510 28.285 449 245 20 38 433 40 464 4.81e-32 127
MS.gene81246.t1 MTR_8g011350 25.576 434 236 15 40 402 41 458 5.28e-32 127
MS.gene81246.t1 MTR_3g434850 26.752 471 281 20 8 438 7 453 5.68e-32 127
MS.gene81246.t1 MTR_4g021520 26.591 440 264 14 38 433 41 465 1.28e-31 126
MS.gene81246.t1 MTR_3g100420 25.792 442 258 15 43 433 69 491 7.75e-31 124
MS.gene81246.t1 MTR_2g009200 25.866 433 257 15 38 433 29 434 1.01e-29 120
MS.gene81246.t1 MTR_4g021530 26.151 478 277 20 6 433 14 465 4.75e-29 119
MS.gene81246.t1 MTR_4g021500 25.977 435 254 16 43 433 490 900 8.02e-29 120
MS.gene81246.t1 MTR_4g021500 25.792 442 267 15 38 434 41 466 4.42e-28 118
MS.gene81246.t1 MTR_4g021490 26.067 445 260 18 38 433 41 465 4.02e-28 116
MS.gene81246.t1 MTR_4g021500 25.792 442 267 15 38 434 41 466 4.62e-28 118
MS.gene81246.t1 MTR_4g021500 26.253 419 255 17 43 433 490 882 8.93e-28 117
MS.gene81246.t1 MTR_7g080180 35.870 184 102 7 44 217 44 221 4.54e-27 113
MS.gene81246.t1 MTR_7g080180 35.870 184 102 7 44 217 44 221 4.78e-27 114
MS.gene81246.t1 MTR_2g084530 26.998 463 274 18 10 429 6 447 5.65e-27 113
MS.gene81246.t1 MTR_3g045770 24.299 428 273 14 40 432 37 448 7.97e-27 112
MS.gene81246.t1 MTR_4g021520 26.551 403 238 13 38 397 41 428 9.81e-27 112
MS.gene81246.t1 MTR_2g063000 23.758 463 264 17 1 422 1 415 2.08e-26 111
MS.gene81246.t1 MTR_7g051430 32.701 211 126 7 16 215 14 219 4.88e-26 109
MS.gene81246.t1 MTR_7g051430 32.701 211 126 7 16 215 14 219 1.86e-25 108
MS.gene81246.t1 MTR_4g021535 24.385 447 278 15 6 433 9 414 3.82e-25 107
MS.gene81246.t1 MTR_2g018630 24.148 352 234 9 111 438 18 360 2.25e-21 95.5
MS.gene81246.t1 MTR_1g102130 21.578 431 254 13 44 438 107 489 2.93e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81246.t1 AT1G15000 58.670 421 165 5 35 453 28 441 2.16e-175 499
MS.gene81246.t1 AT3G10410 33.659 410 246 7 38 433 95 492 8.10e-71 233
MS.gene81246.t1 AT5G22980 32.506 403 254 6 44 436 100 494 4.89e-68 226
MS.gene81246.t1 AT3G45010 31.358 405 258 5 44 436 103 499 8.88e-67 222
MS.gene81246.t1 AT3G52000 30.467 407 251 10 45 433 81 473 7.10e-51 179
MS.gene81246.t1 AT3G52010 29.833 419 242 16 45 433 82 478 3.28e-45 164
MS.gene81246.t1 AT3G63470 30.807 409 240 14 45 429 98 487 6.24e-43 158
MS.gene81246.t1 AT2G05850 30.383 418 242 17 45 433 81 478 6.99e-43 158
MS.gene81246.t1 AT2G35780 27.529 425 258 12 44 438 46 450 2.64e-41 153
MS.gene81246.t1 AT3G07990 30.097 412 246 15 44 429 50 445 8.03e-41 152
MS.gene81246.t1 AT2G35770 28.362 409 242 12 44 422 54 441 2.23e-40 150
MS.gene81246.t1 AT1G43780 26.013 469 299 12 11 438 8 469 2.55e-40 150
MS.gene81246.t1 AT3G52020 27.229 415 258 16 45 433 96 492 2.41e-39 148
MS.gene81246.t1 AT1G73270 26.190 420 268 12 43 442 48 445 2.92e-39 147
MS.gene81246.t1 AT3G12203 26.374 455 290 13 1 433 1 432 1.00e-37 143
MS.gene81246.t1 AT3G12203 27.163 416 263 12 35 433 19 411 1.33e-37 142
MS.gene81246.t1 AT1G73270 25.962 416 266 12 43 438 48 441 1.50e-37 142
MS.gene81246.t1 AT5G08260 27.404 416 251 15 56 433 68 470 9.39e-37 141
MS.gene81246.t1 AT5G23210 26.517 445 260 13 44 438 67 494 9.95e-37 141
MS.gene81246.t1 AT5G36180 25.366 410 266 11 43 433 48 436 1.41e-36 140
MS.gene81246.t1 AT1G73290 25.537 419 267 13 34 433 41 433 2.25e-36 139
MS.gene81246.t1 AT1G73300 24.634 410 269 11 43 433 48 436 2.29e-36 139
MS.gene81246.t1 AT1G73300 24.634 410 269 11 43 433 48 436 2.29e-36 139
MS.gene81246.t1 AT3G12203 27.411 394 249 11 57 433 1 374 3.16e-36 137
MS.gene81246.t1 AT2G22990 24.634 410 271 13 43 433 38 428 1.46e-35 137
MS.gene81246.t1 AT1G73310 25.547 411 264 12 43 433 48 436 1.51e-35 137
MS.gene81246.t1 AT2G23000 24.694 409 274 12 43 433 40 432 1.59e-35 137
MS.gene81246.t1 AT2G23000 24.694 409 274 12 43 433 40 432 1.59e-35 137
MS.gene81246.t1 AT4G12910 28.414 454 237 21 40 422 45 481 2.33e-35 137
MS.gene81246.t1 AT3G17180 27.570 428 259 16 44 433 55 469 7.35e-35 135
MS.gene81246.t1 AT2G22920 24.757 412 268 12 43 433 40 430 8.25e-35 135
MS.gene81246.t1 AT1G73280 24.324 444 285 13 20 433 14 436 1.08e-34 134
MS.gene81246.t1 AT1G61130 27.962 422 250 16 44 429 47 450 1.97e-34 134
MS.gene81246.t1 AT2G23010 24.940 417 276 12 35 433 35 432 2.65e-34 133
MS.gene81246.t1 AT1G33540 25.114 438 269 11 43 438 44 464 4.41e-34 133
MS.gene81246.t1 AT1G11080 27.335 439 241 16 44 429 66 479 1.83e-33 132
MS.gene81246.t1 AT1G11080 27.335 439 241 16 44 429 66 479 2.03e-33 132
MS.gene81246.t1 AT1G73310 25.258 388 250 10 43 411 48 414 2.39e-33 130
MS.gene81246.t1 AT4G30810 25.598 418 268 12 44 433 54 456 3.15e-33 131
MS.gene81246.t1 AT1G73290 25.521 384 243 11 34 399 41 399 3.72e-33 129
MS.gene81246.t1 AT1G33540 25.057 435 267 11 46 438 4 421 3.72e-33 130
MS.gene81246.t1 AT2G22920 24.934 377 243 10 43 399 40 396 7.67e-33 129
MS.gene81246.t1 AT3G12240 25.854 410 264 14 43 433 43 431 8.66e-33 129
MS.gene81246.t1 AT3G12230 26.341 410 262 13 43 433 42 430 8.79e-33 129
MS.gene81246.t1 AT2G22990 24.474 380 251 11 43 404 38 399 9.88e-33 129
MS.gene81246.t1 AT4G30610 28.111 434 269 18 36 438 40 461 1.06e-32 129
MS.gene81246.t1 AT2G23010 24.450 409 275 11 43 433 40 432 1.15e-32 129
MS.gene81246.t1 AT4G15100 26.207 435 257 14 44 433 60 475 1.41e-32 129
MS.gene81246.t1 AT2G22980 23.659 410 269 12 43 433 41 425 1.59e-32 128
MS.gene81246.t1 AT2G22970 24.634 410 269 13 43 433 40 428 1.61e-32 128
MS.gene81246.t1 AT2G22990 24.474 380 251 11 43 404 38 399 1.68e-32 129
MS.gene81246.t1 AT2G27920 26.139 417 239 14 62 429 56 452 4.85e-32 127
MS.gene81246.t1 AT2G33530 26.291 426 260 16 44 433 49 456 1.27e-31 126
MS.gene81246.t1 AT3G10450 23.472 409 275 9 43 433 44 432 2.04e-31 125
MS.gene81246.t1 AT3G02110 28.297 417 246 15 44 422 53 454 3.95e-31 125
MS.gene81246.t1 AT5G23210 26.735 389 223 12 44 382 67 443 5.26e-31 124
MS.gene81246.t1 AT3G12220 25.298 419 268 15 35 433 37 430 8.76e-31 123
MS.gene81246.t1 AT3G10450 23.399 406 273 9 46 433 4 389 1.02e-30 122
MS.gene81246.t1 AT2G24010 25.891 421 270 13 44 438 46 450 2.10e-30 122
MS.gene81246.t1 AT1G28110 26.683 416 269 12 44 433 47 452 2.13e-30 123
MS.gene81246.t1 AT1G28110 26.683 416 269 12 44 433 47 452 2.13e-30 123
MS.gene81246.t1 AT4G12910 27.700 426 225 19 40 397 45 455 2.34e-30 122
MS.gene81246.t1 AT2G22980 23.907 389 249 12 35 404 36 396 3.84e-30 121
MS.gene81246.t1 AT3G56540 38.235 170 95 5 45 208 96 261 3.95e-30 118
MS.gene81246.t1 AT2G22980 23.601 411 264 13 35 426 36 415 5.43e-30 121
MS.gene81246.t1 AT3G12220 25.245 408 263 14 46 433 15 400 6.12e-30 120
MS.gene81246.t1 AT2G22970 24.211 380 250 11 43 404 40 399 1.78e-29 119
MS.gene81246.t1 AT2G22970 24.211 380 250 11 43 404 40 399 3.25e-29 119
MS.gene81246.t1 AT2G22990 23.704 405 272 14 43 433 38 419 3.65e-29 119
MS.gene81246.t1 AT2G24000 27.561 410 255 16 44 422 46 444 4.16e-29 119
MS.gene81246.t1 AT3G17180 27.157 394 237 15 44 400 55 435 2.51e-28 116
MS.gene81246.t1 AT2G12480 25.250 400 270 15 44 433 47 427 8.67e-28 115
MS.gene81246.t1 AT5G42240 25.882 425 276 14 44 438 48 463 1.10e-27 115
MS.gene81246.t1 AT2G12480 24.372 398 274 13 44 433 47 425 1.20e-27 115
MS.gene81246.t1 AT3G25420 33.152 184 113 4 40 217 40 219 1.21e-27 115
MS.gene81246.t1 AT3G10450 23.545 378 251 9 43 402 44 401 1.54e-27 114
MS.gene81246.t1 AT2G12480 24.528 424 267 13 44 433 47 451 2.78e-27 114
MS.gene81246.t1 AT3G12220 24.121 398 234 11 43 433 42 378 3.42e-27 112
MS.gene81246.t1 AT5G23210 25.123 406 240 12 83 438 8 399 3.92e-27 112
MS.gene81246.t1 AT3G10450 23.467 375 249 9 46 402 4 358 9.84e-27 111
MS.gene81246.t1 AT5G36180 24.850 334 220 9 113 433 19 334 1.26e-26 110
MS.gene81246.t1 AT5G36180 24.850 334 220 9 113 433 19 334 1.26e-26 110
MS.gene81246.t1 AT5G23210 24.938 405 240 12 84 438 8 398 1.70e-26 110
MS.gene81246.t1 AT5G42230 24.700 417 259 14 44 422 44 443 3.78e-26 110
MS.gene81246.t1 AT5G42230 24.700 417 259 14 44 422 44 443 3.78e-26 110
MS.gene81246.t1 AT2G12480 24.311 399 274 14 44 433 47 426 5.37e-26 110
MS.gene81246.t1 AT5G09640 24.359 468 294 15 10 433 9 460 6.05e-26 110
MS.gene81246.t1 AT2G24010 24.771 436 271 14 44 438 46 465 7.29e-26 110
MS.gene81246.t1 AT2G27920 25.189 397 230 13 81 429 3 380 2.64e-25 107
MS.gene81246.t1 AT1G73280 22.754 334 227 9 113 433 19 334 1.30e-23 101
MS.gene81246.t1 AT1G73290 28.111 217 143 4 34 244 41 250 2.92e-23 100
MS.gene81246.t1 AT2G24010 30.213 235 140 7 44 258 17 247 4.05e-23 100
MS.gene81246.t1 AT5G36180 24.834 302 198 7 113 402 19 303 6.16e-23 99.4
MS.gene81246.t1 AT1G73280 24.545 330 216 8 43 354 48 362 1.06e-22 99.8
MS.gene81246.t1 AT1G73310 24.359 312 205 8 113 411 19 312 1.33e-22 98.6
MS.gene81246.t1 AT1G73280 22.936 327 221 9 120 433 1 309 1.48e-22 98.2
MS.gene81246.t1 AT2G22990 23.242 327 222 11 120 433 4 314 3.14e-22 97.4
MS.gene81246.t1 AT2G22920 30.337 178 114 3 43 214 40 213 3.99e-22 97.1
MS.gene81246.t1 AT5G36180 25.084 299 195 7 113 399 19 300 1.13e-21 96.3
MS.gene81246.t1 AT2G24010 23.427 461 271 15 44 438 17 461 1.96e-21 97.1
MS.gene81246.t1 AT5G23210 24.928 349 203 11 84 382 8 347 8.93e-21 94.0
MS.gene81246.t1 AT2G22990 22.630 327 224 11 120 433 4 314 1.33e-20 92.8
MS.gene81246.t1 AT2G22980 24.096 332 213 10 43 354 41 353 4.49e-20 91.7
MS.gene81246.t1 AT5G22960 32.934 167 87 4 32 195 21 165 5.94e-20 87.8
MS.gene81246.t1 AT2G22970 27.979 193 121 4 43 229 40 220 7.26e-20 90.5
MS.gene81246.t1 AT2G27920 23.932 351 206 11 127 429 48 385 4.90e-17 83.2
MS.gene81246.t1 AT2G22980 22.483 298 196 9 120 404 4 279 7.99e-17 81.3

Find 114 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTACAAATGTTGTGGTTT+TGG 0.238119 5.2:+81447764 MS.gene81246:CDS
CATCGTCCTATTTATATTAC+TGG 0.245739 5.2:+81447051 MS.gene81246:CDS
CCACTTCTCATTTGGCTTCA+AGG 0.279137 5.2:+81446775 MS.gene81246:CDS
CACAAACTCCACTTCTCATT+TGG 0.289156 5.2:+81446767 MS.gene81246:CDS
AGGGAGATTTGGAAGGTAAA+TGG 0.303899 5.2:+81447708 MS.gene81246:CDS
AGAAATGTAGTAAAATTGTT+TGG 0.305716 5.2:+81447505 MS.gene81246:CDS
AATGAAAAGTGTAAAGTATA+TGG 0.327632 5.2:+81447548 MS.gene81246:CDS
AGTTAGTAGAGAGAAGGAAT+TGG 0.342651 5.2:+81447301 MS.gene81246:CDS
TGAATGCTGAGAGGGAGATT+TGG 0.347779 5.2:+81447697 MS.gene81246:CDS
CTCAAGCTATGATAGAAGAT+TGG 0.349871 5.2:+81447826 MS.gene81246:CDS
CTTTCACCAGTAATATAAAT+AGG 0.353685 5.2:-81447057 None:intergenic
TGATGCGAGAAGCCGTGTTT+TGG 0.354009 5.2:+81447335 MS.gene81246:CDS
GGTGCTTGGAATAGAATCTT+TGG 0.358892 5.2:+81446886 MS.gene81246:CDS
AAAATATAGTATCCTATTGC+AGG 0.359314 5.2:-81447099 None:intergenic
ACAGTTTCATACCTCTTTCT+CGG 0.361030 5.2:+81446615 MS.gene81246:CDS
TATGATAGAAGATTGGGTTT+TGG 0.369050 5.2:+81447833 MS.gene81246:CDS
TGAAGCACTTCCCACAAAAT+CGG 0.376042 5.2:+81446663 MS.gene81246:CDS
ATTTGGCTTCAAGGTGGCCC+TGG 0.377060 5.2:+81446784 MS.gene81246:CDS
TTCATAGAATGTGTAGAAAA+TGG 0.377408 5.2:-81446719 None:intergenic
GGAAAGTATATTCCTGCAAT+AGG 0.387729 5.2:+81447087 MS.gene81246:CDS
GGAAAGTTCCTTATGAAGAT+TGG 0.388838 5.2:+81447406 MS.gene81246:CDS
CCGACCATGGAGGAGCATCC+AGG 0.404059 5.2:-81446802 None:intergenic
AAGCACCAGGGTTCGGTTGA+AGG 0.410766 5.2:-81446870 None:intergenic
GCTGATAATGCTTATTATGC+TGG 0.411854 5.2:+81447222 MS.gene81246:CDS
TCAAGCTATGATAGAAGATT+GGG 0.412951 5.2:+81447827 MS.gene81246:CDS
CTTGATAATCCCATTGGAAC+CGG 0.413486 5.2:+81446919 MS.gene81246:CDS
GAAGTGGAAGTGGAAGTTAC+AGG 0.422934 5.2:-81446694 None:intergenic
TCCGCGACCGCGGTTTGATC+AGG 0.427352 5.2:-81446976 None:intergenic
TGTGTAGAAAATGGAGGAAG+TGG 0.442760 5.2:-81446710 None:intergenic
CTATTCCAAGCACCAGGGTT+CGG 0.444291 5.2:-81446877 None:intergenic
TTCAACCGAACCCTGGTGCT+TGG 0.445254 5.2:+81446872 MS.gene81246:CDS
AGTTATTGAAGGAGGAGATG+AGG 0.447309 5.2:+81447577 MS.gene81246:CDS
ATTACTGGTGAAAGCTATGC+TGG 0.449873 5.2:+81447066 MS.gene81246:CDS
GCTGGTGTGGCAATTGGTAA+TGG 0.450136 5.2:+81447165 MS.gene81246:CDS
TCAAGGTCAGCGCGATTTGA+GGG 0.450151 5.2:+81447611 MS.gene81246:CDS
GAAAATGGAGGAAGTGGAAG+TGG 0.451895 5.2:-81446704 None:intergenic
ATAGGACGATGTTTGAAAAC+AGG 0.451910 5.2:-81447039 None:intergenic
GTTATTGAAGGAGGAGATGA+GGG 0.455839 5.2:+81447578 MS.gene81246:CDS
TGAGTAACCATTTGAGTGAC+AGG 0.456839 5.2:-81447198 None:intergenic
GTGTTGTTCAAGTAGAGGCT+TGG 0.459918 5.2:+81447637 MS.gene81246:CDS
GCCGAGGTGAAGAAGGCCTT+AGG 0.462397 5.2:+81447453 MS.gene81246:CDS
GAAATGTAGTAAAATTGTTT+GGG 0.465315 5.2:+81447506 MS.gene81246:CDS
AGATTAGATGATGATGAAGA+AGG 0.472655 5.2:+81446540 None:intergenic
CTACTTTGTATGATTATTCG+CGG 0.473157 5.2:+81447385 MS.gene81246:CDS
TGTTGTTCAAGTAGAGGCTT+GGG 0.474736 5.2:+81447638 MS.gene81246:CDS
GATCTGTTGCAAAACATGAC+AGG 0.477010 5.2:+81447357 MS.gene81246:CDS
GAAGCACTTCCCACAAAATC+GGG 0.477743 5.2:+81446664 MS.gene81246:CDS
GAATTCAAAGGTTGATCAGC+AGG 0.480763 5.2:-81447804 None:intergenic
AATTTAGCTGGTGTGGCAAT+TGG 0.481203 5.2:+81447159 MS.gene81246:CDS
TACACTGAAGCCGGTTCCAA+TGG 0.482170 5.2:-81446929 None:intergenic
AGTGAACTGGTGACACGATA+AGG 0.483546 5.2:-81446844 None:intergenic
ACCTGATCAAACCGCGGTCG+CGG 0.493201 5.2:+81446975 MS.gene81246:CDS
ATCAAGGTCAGCGCGATTTG+AGG 0.495996 5.2:+81447610 MS.gene81246:CDS
AACAGACCCTGTCACTCAAA+TGG 0.500996 5.2:+81447191 MS.gene81246:CDS
TATGGTAGAGAAGTTATTGA+AGG 0.501796 5.2:+81447566 MS.gene81246:CDS
AGAAGTGGAGTTTGTGAGAG+AGG 0.513484 5.2:-81446760 None:intergenic
CCGAGGTGAAGAAGGCCTTA+GGG 0.514988 5.2:+81447454 MS.gene81246:CDS
TTCGTAGAAGTTGCCGACCA+TGG 0.515110 5.2:-81446815 None:intergenic
AAGATTCTATTCCAAGCACC+AGG 0.515779 5.2:-81446883 None:intergenic
AGAGGTATGAAACTGTAAGA+AGG 0.518279 5.2:-81446608 None:intergenic
CTGTTGAGTTAGTAGAGAGA+AGG 0.518494 5.2:+81447295 MS.gene81246:CDS
GCGACCGCGGTTTGATCAGG+TGG 0.521197 5.2:-81446973 None:intergenic
GAATATCGCCGAGGTGAAGA+AGG 0.524568 5.2:+81447446 MS.gene81246:CDS
TGGCCCTGGATGCTCCTCCA+TGG 0.528212 5.2:+81446798 MS.gene81246:CDS
ACACTGAAGCCGGTTCCAAT+GGG 0.529318 5.2:-81446928 None:intergenic
TTTGTGGGAAGTGCTTCATA+GGG 0.531819 5.2:-81446658 None:intergenic
GCAACCAACCAATCTTCATA+AGG 0.532058 5.2:-81447414 None:intergenic
CGACCATGGAGGAGCATCCA+GGG 0.532443 5.2:-81446801 None:intergenic
AGCACCAGGGTTCGGTTGAA+GGG 0.533711 5.2:-81446869 None:intergenic
ATGAGGGTGTTGTTGTATCA+AGG 0.538392 5.2:+81447594 MS.gene81246:CDS
GGTAGAGAAGTTATTGAAGG+AGG 0.540034 5.2:+81447569 MS.gene81246:CDS
AAGGTAAATGGAGAGGTAGC+TGG 0.540195 5.2:+81447720 MS.gene81246:CDS
AGTTCCTTATGAAGATTGGT+TGG 0.542038 5.2:+81447410 MS.gene81246:CDS
ACTGAAAGAGTGAATTTAGC+TGG 0.543185 5.2:+81447147 MS.gene81246:CDS
TCAAGAAATTCTGTGTATGA+TGG 0.545978 5.2:+81447894 MS.gene81246:CDS
AGTTTGTGAGAGAGGTGAAG+TGG 0.549455 5.2:-81446752 None:intergenic
ATCATAGCTTGAGAATTCAA+AGG 0.554096 5.2:-81447816 None:intergenic
CTTCTCATTTGGCTTCAAGG+TGG 0.555035 5.2:+81446778 MS.gene81246:CDS
AGAATGTGAGACCGAGAAAG+AGG 0.555113 5.2:-81446626 None:intergenic
CGGTTGAAGGGTGAGTGAAC+TGG 0.558471 5.2:-81446857 None:intergenic
CGTTGAAGCTACACTGAAGC+CGG 0.564081 5.2:-81446938 None:intergenic
TGAGAGGCAGAAGAATGAGC+TGG 0.566827 5.2:+81447254 MS.gene81246:CDS
GTCGGCAACTTCTACGAACT+CGG 0.567355 5.2:+81446820 MS.gene81246:CDS
TGATCAGGTGGAATCTCTTG+CGG 0.569682 5.2:-81446961 None:intergenic
CCTTGAAGCCAAATGAGAAG+TGG 0.570775 5.2:-81446775 None:intergenic
ATCTGTTGCAAAACATGACA+GGG 0.572050 5.2:+81447358 MS.gene81246:CDS
GGTCGGTGTTGTTCAAGTAG+AGG 0.576352 5.2:+81447632 MS.gene81246:CDS
TGAAGACTATGAAGTGGGAA+GGG 0.578533 5.2:+81447661 MS.gene81246:CDS
CCTGGATGCTCCTCCATGGT+CGG 0.578735 5.2:+81446802 MS.gene81246:CDS
TTCATCAACATTCACCCCTA+AGG 0.579891 5.2:-81447469 None:intergenic
TGGAAGTGGAAGTTACAGGT+AGG 0.584581 5.2:-81446690 None:intergenic
GAAGTCACTTACAAATGTTG+TGG 0.585885 5.2:+81447758 MS.gene81246:CDS
GTGAAGACTATGAAGTGGGA+AGG 0.588138 5.2:+81447660 MS.gene81246:CDS
GGTCAGCGCGATTTGAGGGT+CGG 0.591816 5.2:+81447615 MS.gene81246:CDS
TGCTGAGAGGGAGATTTGGA+AGG 0.592166 5.2:+81447701 MS.gene81246:CDS
GATTTGGAAGGTAAATGGAG+AGG 0.595537 5.2:+81447713 MS.gene81246:CDS
CTCACCCTTCAACCGAACCC+TGG 0.603960 5.2:+81446865 MS.gene81246:CDS
CGAGGTGAAGAAGGCCTTAG+GGG 0.621823 5.2:+81447455 MS.gene81246:CDS
ATAGAATGTGTAGAAAATGG+AGG 0.624076 5.2:-81446716 None:intergenic
TTGGGTGAAGACTATGAAGT+GGG 0.627868 5.2:+81447656 MS.gene81246:CDS
CTTGGGTGAAGACTATGAAG+TGG 0.631263 5.2:+81447655 MS.gene81246:CDS
AAGAGTGAATTTAGCTGGTG+TGG 0.636029 5.2:+81447152 MS.gene81246:CDS
GAAAAGATGTTCCGCGACCG+CGG 0.639458 5.2:-81446986 None:intergenic
CCCTAAGGCCTTCTTCACCT+CGG 0.643912 5.2:-81447454 None:intergenic
ATGCTGGATTGATCAATGAG+AGG 0.656499 5.2:+81447238 MS.gene81246:CDS
TTGTGGGAAGTGCTTCATAG+GGG 0.670126 5.2:-81446657 None:intergenic
TTTGCAACAGATCCAAAACA+CGG 0.674823 5.2:-81447347 None:intergenic
AGATTCTATTCCAAGCACCA+GGG 0.689174 5.2:-81446882 None:intergenic
GAGTAACCATTTGAGTGACA+GGG 0.711890 5.2:-81447197 None:intergenic
TCAGTTCTTGAATATCGCCG+AGG 0.712182 5.2:+81447437 MS.gene81246:CDS
AATGAGTGTACTGATGAACA+AGG 0.751397 5.2:-81446578 None:intergenic
GTAGAAGTTGCCGACCATGG+AGG 0.752191 5.2:-81446812 None:intergenic
GATTCCACCTGATCAAACCG+CGG 0.760667 5.2:+81446969 MS.gene81246:CDS
GAGTGTACTGATGAACAAGG+TGG 0.804627 5.2:-81446575 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATGTAGTAAAATTGTT+TGG + chr5.2:81447505-81447524 MS.gene81246:CDS 20.0%
!! GAAATGTAGTAAAATTGTTT+GGG + chr5.2:81447506-81447525 MS.gene81246:CDS 20.0%
!!! AATGAAAAGTGTAAAGTATA+TGG + chr5.2:81447548-81447567 MS.gene81246:CDS 20.0%
! AAAATATAGTATCCTATTGC+AGG - chr5.2:81447102-81447121 None:intergenic 25.0%
! CTTTCACCAGTAATATAAAT+AGG - chr5.2:81447060-81447079 None:intergenic 25.0%
! TTCATAGAATGTGTAGAAAA+TGG - chr5.2:81446722-81446741 None:intergenic 25.0%
ATAGAATGTGTAGAAAATGG+AGG - chr5.2:81446719-81446738 None:intergenic 30.0%
ATCATAGCTTGAGAATTCAA+AGG - chr5.2:81447819-81447838 None:intergenic 30.0%
CATCGTCCTATTTATATTAC+TGG + chr5.2:81447051-81447070 MS.gene81246:CDS 30.0%
CTACTTTGTATGATTATTCG+CGG + chr5.2:81447385-81447404 MS.gene81246:CDS 30.0%
TAGCTGGTTATGTACAAAAA+TGG + chr5.2:81447736-81447755 MS.gene81246:CDS 30.0%
TATGGTAGAGAAGTTATTGA+AGG + chr5.2:81447566-81447585 MS.gene81246:CDS 30.0%
TCAAGAAATTCTGTGTATGA+TGG + chr5.2:81447894-81447913 MS.gene81246:CDS 30.0%
TCAAGCTATGATAGAAGATT+GGG + chr5.2:81447827-81447846 MS.gene81246:CDS 30.0%
TGGGATTATCAAGAAAAACA+AGG - chr5.2:81446912-81446931 None:intergenic 30.0%
! ACTTACAAATGTTGTGGTTT+TGG + chr5.2:81447764-81447783 MS.gene81246:CDS 30.0%
! CTTACAAATGTTGTGGTTTT+GGG + chr5.2:81447765-81447784 MS.gene81246:CDS 30.0%
! TATGATAGAAGATTGGGTTT+TGG + chr5.2:81447833-81447852 MS.gene81246:CDS 30.0%
!! GTTTTTCTTGATAATCCCAT+TGG + chr5.2:81446913-81446932 MS.gene81246:CDS 30.0%
!! TTACAAATGTTGTGGTTTTG+GGG + chr5.2:81447766-81447785 MS.gene81246:CDS 30.0%
ACAGTTTCATACCTCTTTCT+CGG + chr5.2:81446615-81446634 MS.gene81246:CDS 35.0%
ACTGAAAGAGTGAATTTAGC+TGG + chr5.2:81447147-81447166 MS.gene81246:CDS 35.0%
AGTTAGTAGAGAGAAGGAAT+TGG + chr5.2:81447301-81447320 MS.gene81246:CDS 35.0%
AGTTCCTTATGAAGATTGGT+TGG + chr5.2:81447410-81447429 MS.gene81246:CDS 35.0%
ATAGGACGATGTTTGAAAAC+AGG - chr5.2:81447042-81447061 None:intergenic 35.0%
ATCTGTTGCAAAACATGACA+GGG + chr5.2:81447358-81447377 MS.gene81246:CDS 35.0%
CTCAAGCTATGATAGAAGAT+TGG + chr5.2:81447826-81447845 MS.gene81246:CDS 35.0%
GAAGTCACTTACAAATGTTG+TGG + chr5.2:81447758-81447777 MS.gene81246:CDS 35.0%
GGAAAGTTCCTTATGAAGAT+TGG + chr5.2:81447406-81447425 MS.gene81246:CDS 35.0%
TTTGCAACAGATCCAAAACA+CGG - chr5.2:81447350-81447369 None:intergenic 35.0%
! AATGAGTGTACTGATGAACA+AGG - chr5.2:81446581-81446600 None:intergenic 35.0%
! AGAATTTTGTGAATGCTGAG+AGG + chr5.2:81447688-81447707 MS.gene81246:CDS 35.0%
! AGAGGTATGAAACTGTAAGA+AGG - chr5.2:81446611-81446630 None:intergenic 35.0%
! ATCTTTTCGCTGCTATAACA+AGG + chr5.2:81447001-81447020 MS.gene81246:CDS 35.0%
! GAATTTTGTGAATGCTGAGA+GGG + chr5.2:81447689-81447708 MS.gene81246:CDS 35.0%
! GCTGATAATGCTTATTATGC+TGG + chr5.2:81447222-81447241 MS.gene81246:CDS 35.0%
! GGAAAGTATATTCCTGCAAT+AGG + chr5.2:81447087-81447106 MS.gene81246:CDS 35.0%
!!! AGAAGATTGGGTTTTGGAAA+AGG + chr5.2:81447839-81447858 MS.gene81246:CDS 35.0%
!!! GAAGATTGGGTTTTGGAAAA+GGG + chr5.2:81447840-81447859 MS.gene81246:CDS 35.0%
!!! GTTTTGGAAAAGGGTTTGTT+TGG + chr5.2:81447849-81447868 MS.gene81246:CDS 35.0%
!!! TACAAATGTTGTGGTTTTGG+GGG + chr5.2:81447767-81447786 MS.gene81246:CDS 35.0%
AAGAGTGAATTTAGCTGGTG+TGG + chr5.2:81447152-81447171 MS.gene81246:CDS 40.0%
AAGATTCTATTCCAAGCACC+AGG - chr5.2:81446886-81446905 None:intergenic 40.0%
AATTTAGCTGGTGTGGCAAT+TGG + chr5.2:81447159-81447178 MS.gene81246:CDS 40.0%
AGATTCTATTCCAAGCACCA+GGG - chr5.2:81446885-81446904 None:intergenic 40.0%
AGGGAGATTTGGAAGGTAAA+TGG + chr5.2:81447708-81447727 MS.gene81246:CDS 40.0%
AGTTATTGAAGGAGGAGATG+AGG + chr5.2:81447577-81447596 MS.gene81246:CDS 40.0%
ATGCTGGATTGATCAATGAG+AGG + chr5.2:81447238-81447257 MS.gene81246:CDS 40.0%
ATTACTGGTGAAAGCTATGC+TGG + chr5.2:81447066-81447085 MS.gene81246:CDS 40.0%
CACAAACTCCACTTCTCATT+TGG + chr5.2:81446767-81446786 MS.gene81246:CDS 40.0%
CTGTTGAGTTAGTAGAGAGA+AGG + chr5.2:81447295-81447314 MS.gene81246:CDS 40.0%
GAGTAACCATTTGAGTGACA+GGG - chr5.2:81447200-81447219 None:intergenic 40.0%
GATCTGTTGCAAAACATGAC+AGG + chr5.2:81447357-81447376 MS.gene81246:CDS 40.0%
GATTTGGAAGGTAAATGGAG+AGG + chr5.2:81447713-81447732 MS.gene81246:CDS 40.0%
GCAACCAACCAATCTTCATA+AGG - chr5.2:81447417-81447436 None:intergenic 40.0%
GGTAGAGAAGTTATTGAAGG+AGG + chr5.2:81447569-81447588 MS.gene81246:CDS 40.0%
GGTGCTTGGAATAGAATCTT+TGG + chr5.2:81446886-81446905 MS.gene81246:CDS 40.0%
GTTATTGAAGGAGGAGATGA+GGG + chr5.2:81447578-81447597 MS.gene81246:CDS 40.0%
TGAAGACTATGAAGTGGGAA+GGG + chr5.2:81447661-81447680 MS.gene81246:CDS 40.0%
TGAGTAACCATTTGAGTGAC+AGG - chr5.2:81447201-81447220 None:intergenic 40.0%
TGTGTAGAAAATGGAGGAAG+TGG - chr5.2:81446713-81446732 None:intergenic 40.0%
TGTTGTTCAAGTAGAGGCTT+GGG + chr5.2:81447638-81447657 MS.gene81246:CDS 40.0%
TTCATCAACATTCACCCCTA+AGG - chr5.2:81447472-81447491 None:intergenic 40.0%
TTGGGTGAAGACTATGAAGT+GGG + chr5.2:81447656-81447675 MS.gene81246:CDS 40.0%
! CTTGATAATCCCATTGGAAC+CGG + chr5.2:81446919-81446938 MS.gene81246:CDS 40.0%
! GAATTCAAAGGTTGATCAGC+AGG - chr5.2:81447807-81447826 None:intergenic 40.0%
! TGAAGCACTTCCCACAAAAT+CGG + chr5.2:81446663-81446682 MS.gene81246:CDS 40.0%
!! ATGAGGGTGTTGTTGTATCA+AGG + chr5.2:81447594-81447613 MS.gene81246:CDS 40.0%
!! TTTGTGGGAAGTGCTTCATA+GGG - chr5.2:81446661-81446680 None:intergenic 40.0%
!!! ACAAATGTTGTGGTTTTGGG+GGG + chr5.2:81447768-81447787 MS.gene81246:CDS 40.0%
!!! TTTTGTGGGAAGTGCTTCAT+AGG - chr5.2:81446662-81446681 None:intergenic 40.0%
AACAGACCCTGTCACTCAAA+TGG + chr5.2:81447191-81447210 MS.gene81246:CDS 45.0%
AAGGTAAATGGAGAGGTAGC+TGG + chr5.2:81447720-81447739 MS.gene81246:CDS 45.0%
AGAAGTGGAGTTTGTGAGAG+AGG - chr5.2:81446763-81446782 None:intergenic 45.0%
AGAATGTGAGACCGAGAAAG+AGG - chr5.2:81446629-81446648 None:intergenic 45.0%
AGTGAACTGGTGACACGATA+AGG - chr5.2:81446847-81446866 None:intergenic 45.0%
AGTTTGTGAGAGAGGTGAAG+TGG - chr5.2:81446755-81446774 None:intergenic 45.0%
CCTTGAAGCCAAATGAGAAG+TGG - chr5.2:81446778-81446797 None:intergenic 45.0%
CTTGGGTGAAGACTATGAAG+TGG + chr5.2:81447655-81447674 MS.gene81246:CDS 45.0%
GAAAATGGAGGAAGTGGAAG+TGG - chr5.2:81446707-81446726 None:intergenic 45.0%
GAAGTGGAAGTGGAAGTTAC+AGG - chr5.2:81446697-81446716 None:intergenic 45.0%
GTGAAGACTATGAAGTGGGA+AGG + chr5.2:81447660-81447679 MS.gene81246:CDS 45.0%
TCAGTTCTTGAATATCGCCG+AGG + chr5.2:81447437-81447456 MS.gene81246:CDS 45.0%
TGAATGCTGAGAGGGAGATT+TGG + chr5.2:81447697-81447716 MS.gene81246:CDS 45.0%
TGATCAGGTGGAATCTCTTG+CGG - chr5.2:81446964-81446983 None:intergenic 45.0%
TGGAAGTGGAAGTTACAGGT+AGG - chr5.2:81446693-81446712 None:intergenic 45.0%
! AGGTAGGTAACCCGATTTTG+TGG - chr5.2:81446677-81446696 None:intergenic 45.0%
! CCACTTCTCATTTGGCTTCA+AGG + chr5.2:81446775-81446794 MS.gene81246:CDS 45.0%
! CTTCTCATTTGGCTTCAAGG+TGG + chr5.2:81446778-81446797 MS.gene81246:CDS 45.0%
! GAAGCACTTCCCACAAAATC+GGG + chr5.2:81446664-81446683 MS.gene81246:CDS 45.0%
! GAGTGTACTGATGAACAAGG+TGG - chr5.2:81446578-81446597 None:intergenic 45.0%
! GGTAGGTAACCCGATTTTGT+GGG - chr5.2:81446676-81446695 None:intergenic 45.0%
! GTGTTGTTCAAGTAGAGGCT+TGG + chr5.2:81447637-81447656 MS.gene81246:CDS 45.0%
!! TTGTGGGAAGTGCTTCATAG+GGG - chr5.2:81446660-81446679 None:intergenic 45.0%
ATCAAGGTCAGCGCGATTTG+AGG + chr5.2:81447610-81447629 MS.gene81246:CDS 50.0%
CGTTGAAGCTACACTGAAGC+CGG - chr5.2:81446941-81446960 None:intergenic 50.0%
CTATTCCAAGCACCAGGGTT+CGG - chr5.2:81446880-81446899 None:intergenic 50.0%
GAATATCGCCGAGGTGAAGA+AGG + chr5.2:81447446-81447465 MS.gene81246:CDS 50.0%
GATTCCACCTGATCAAACCG+CGG + chr5.2:81446969-81446988 MS.gene81246:CDS 50.0%
GCTGGTGTGGCAATTGGTAA+TGG + chr5.2:81447165-81447184 MS.gene81246:CDS 50.0%
GTCGGCAACTTCTACGAACT+CGG + chr5.2:81446820-81446839 MS.gene81246:CDS 50.0%
TCAAGGTCAGCGCGATTTGA+GGG + chr5.2:81447611-81447630 MS.gene81246:CDS 50.0%
TGAGAGGCAGAAGAATGAGC+TGG + chr5.2:81447254-81447273 MS.gene81246:CDS 50.0%
TGCTGAGAGGGAGATTTGGA+AGG + chr5.2:81447701-81447720 MS.gene81246:CDS 50.0%
TTCGTAGAAGTTGCCGACCA+TGG - chr5.2:81446818-81446837 None:intergenic 50.0%
! ACACTGAAGCCGGTTCCAAT+GGG - chr5.2:81446931-81446950 None:intergenic 50.0%
! TACACTGAAGCCGGTTCCAA+TGG - chr5.2:81446932-81446951 None:intergenic 50.0%
! TGATGCGAGAAGCCGTGTTT+TGG + chr5.2:81447335-81447354 MS.gene81246:CDS 50.0%
!! GGTCGGTGTTGTTCAAGTAG+AGG + chr5.2:81447632-81447651 MS.gene81246:CDS 50.0%
!!! AATGTTGTGGTTTTGGGGGG+TGG + chr5.2:81447771-81447790 MS.gene81246:CDS 50.0%
CCCTAAGGCCTTCTTCACCT+CGG - chr5.2:81447457-81447476 None:intergenic 55.0%
CCGAGGTGAAGAAGGCCTTA+GGG + chr5.2:81447454-81447473 MS.gene81246:CDS 55.0%
CGAGGTGAAGAAGGCCTTAG+GGG + chr5.2:81447455-81447474 MS.gene81246:CDS 55.0%
CGGTTGAAGGGTGAGTGAAC+TGG - chr5.2:81446860-81446879 None:intergenic 55.0%
GAAAAGATGTTCCGCGACCG+CGG - chr5.2:81446989-81447008 None:intergenic 55.0%
GTAGAAGTTGCCGACCATGG+AGG - chr5.2:81446815-81446834 None:intergenic 55.0%
TTCAACCGAACCCTGGTGCT+TGG + chr5.2:81446872-81446891 MS.gene81246:CDS 55.0%
! AAGCACCAGGGTTCGGTTGA+AGG - chr5.2:81446873-81446892 None:intergenic 55.0%
! AGCACCAGGGTTCGGTTGAA+GGG - chr5.2:81446872-81446891 None:intergenic 55.0%
! ATTTGGCTTCAAGGTGGCCC+TGG + chr5.2:81446784-81446803 MS.gene81246:CDS 55.0%
ACCTGATCAAACCGCGGTCG+CGG + chr5.2:81446975-81446994 MS.gene81246:CDS 60.0%
CCTGGATGCTCCTCCATGGT+CGG + chr5.2:81446802-81446821 MS.gene81246:CDS 60.0%
CTCACCCTTCAACCGAACCC+TGG + chr5.2:81446865-81446884 MS.gene81246:CDS 60.0%
GCCGAGGTGAAGAAGGCCTT+AGG + chr5.2:81447453-81447472 MS.gene81246:CDS 60.0%
GGTCAGCGCGATTTGAGGGT+CGG + chr5.2:81447615-81447634 MS.gene81246:CDS 60.0%
!! CGACCATGGAGGAGCATCCA+GGG - chr5.2:81446804-81446823 None:intergenic 60.0%
GCGACCGCGGTTTGATCAGG+TGG - chr5.2:81446976-81446995 None:intergenic 65.0%
TCCGCGACCGCGGTTTGATC+AGG - chr5.2:81446979-81446998 None:intergenic 65.0%
TGGCCCTGGATGCTCCTCCA+TGG + chr5.2:81446798-81446817 MS.gene81246:CDS 65.0%
!! CCGACCATGGAGGAGCATCC+AGG - chr5.2:81446805-81446824 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 81446553 81447920 81446553 ID=MS.gene81246
chr5.2 mRNA 81446553 81447920 81446553 ID=MS.gene81246.t1;Parent=MS.gene81246
chr5.2 exon 81446553 81447920 81446553 ID=MS.gene81246.t1.exon1;Parent=MS.gene81246.t1
chr5.2 CDS 81446553 81447920 81446553 ID=cds.MS.gene81246.t1;Parent=MS.gene81246.t1
Gene Sequence

>MS.gene81246

ATGAAGAAGGAAGACTACTCAACCACCTTGTTCATCAGTACACTCATTTTCTTCTCCTTCTTACAGTTTCATACCTCTTTCTCGGTCTCACATTCTTCGACATTCCCCTATGAAGCACTTCCCACAAAATCGGGTTACCTACCTGTAACTTCCACTTCCACTTCCTCCATTTTCTACACATTCTATGAAGCACAGAACTCCACTTCACCTCTCTCACAAACTCCACTTCTCATTTGGCTTCAAGGTGGCCCTGGATGCTCCTCCATGGTCGGCAACTTCTACGAACTCGGACCTTATCGTGTCACCAGTTCACTCACCCTTCAACCGAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTGTTTTTCTTGATAATCCCATTGGAACCGGCTTCAGTGTAGCTTCAACGCCGCAAGAGATTCCACCTGATCAAACCGCGGTCGCGGAACATCTTTTCGCTGCTATAACAAGGTTTGTTGAACTTGATCCTGTTTTCAAACATCGTCCTATTTATATTACTGGTGAAAGCTATGCTGGAAAGTATATTCCTGCAATAGGATACTATATTTTAGAGAAGAATGCTAAGTTGAAAAGCACTGAAAGAGTGAATTTAGCTGGTGTGGCAATTGGTAATGGACTAACAGACCCTGTCACTCAAATGGTTACTCATGCTGATAATGCTTATTATGCTGGATTGATCAATGAGAGGCAGAAGAATGAGCTGGAAAAACTTCAACTTGAAGCTGTTGAGTTAGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGAGAAGCCGTGTTTTGGATCTGTTGCAAAACATGACAGGGTTTGCTACTTTGTATGATTATTCGCGGAAAGTTCCTTATGAAGATTGGTTGGTTGCTCAGTTCTTGAATATCGCCGAGGTGAAGAAGGCCTTAGGGGTGAATGTTGATGAATCATTTGTTTATGAGAAATGTAGTAAAATTGTTTGGGCTGCATTGCATGCTGATTTAATGAAAAGTGTAAAGTATATGGTAGAGAAGTTATTGAAGGAGGAGATGAGGGTGTTGTTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTTGTTCAAGTAGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATTGAGAATTTTGTGAATGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCACTTACAAATGTTGTGGTTTTGGGGGGTGGTCATCTTTTGCCTGCTGATCAACCTTTGAATTCTCAAGCTATGATAGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTCTTATCGAAATGTATCAAGAAATTCTGTGTATGATGGATGA
Protein sequence

>MS.gene81246.t1

MKKEDYSTTLFISTLIFFSFLQFHTSFSVSHSSTFPYEALPTKSGYLPVTSTSTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMVGNFYELGPYRVTSSLTLQPNPGAWNRIFGLVFLDNPIGTGFSVASTPQEIPPDQTAVAEHLFAAITRFVELDPVFKHRPIYITGESYAGKYIPAIGYYILEKNAKLKSTERVNLAGVAIGNGLTDPVTQMVTHADNAYYAGLINERQKNELEKLQLEAVELVERRNWSEATDARSRVLDLLQNMTGFATLYDYSRKVPYEDWLVAQFLNIAEVKKALGVNVDESFVYEKCSKIVWAALHADLMKSVKYMVEKLLKEEMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIENFVNAEREIWKVNGEVAGYVQKWKSLTNVVVLGGGHLLPADQPLNSQAMIEDWVLEKGLFGSVSYRNVSRNSVYDG