AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068213

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068213.t1 MTR_1g050545 94.411 501 23 2 1 501 1 496 0.0 971
MS.gene068213.t1 MTR_1g094155 72.545 499 130 5 5 501 9 502 0.0 748
MS.gene068213.t1 MTR_2g095750 64.842 475 151 6 26 496 46 508 0.0 640
MS.gene068213.t1 MTR_4g057585 62.609 460 165 2 28 487 42 494 0.0 604
MS.gene068213.t1 MTR_4g057595 62.419 463 167 2 28 490 43 498 0.0 604
MS.gene068213.t1 MTR_4g057600 60.652 460 174 2 28 487 41 493 0.0 588
MS.gene068213.t1 MTR_2g095730 60.797 477 172 7 27 498 41 507 0.0 583
MS.gene068213.t1 MTR_2g095710 56.897 464 175 9 27 487 41 482 1.23e-178 510
MS.gene068213.t1 MTR_4g057570 56.277 462 188 6 30 487 40 491 7.68e-177 506
MS.gene068213.t1 MTR_4g084710 33.500 400 248 6 90 482 45 433 2.35e-66 221
MS.gene068213.t1 MTR_5g097180 32.250 400 253 5 90 482 43 431 7.48e-65 217
MS.gene068213.t1 MTR_3g079560 31.340 418 260 9 85 490 89 491 2.78e-57 198
MS.gene068213.t1 MTR_3g079590 29.604 429 247 10 85 487 89 488 6.87e-54 189
MS.gene068213.t1 MTR_7g021130 29.138 429 260 14 85 485 41 453 5.18e-53 186
MS.gene068213.t1 MTR_3g079600 29.604 429 260 11 85 492 87 494 2.26e-52 185
MS.gene068213.t1 MTR_3g079570 30.861 418 261 10 85 490 90 491 2.72e-52 185
MS.gene068213.t1 MTR_1g021010 31.382 427 248 11 85 491 87 488 1.77e-51 182
MS.gene068213.t1 MTR_7g080180 29.025 472 243 15 88 485 42 495 1.09e-50 180
MS.gene068213.t1 MTR_1g020090 30.607 428 247 12 85 491 101 499 2.32e-50 179
MS.gene068213.t1 MTR_2g449850 31.603 443 240 19 79 485 43 458 7.29e-50 177
MS.gene068213.t1 MTR_3g079630 30.679 427 263 13 85 492 89 501 1.31e-49 177
MS.gene068213.t1 MTR_3g498755 28.972 428 263 14 86 485 27 441 2.61e-49 176
MS.gene068213.t1 MTR_3g434850 31.616 427 247 16 86 485 42 450 3.70e-49 175
MS.gene068213.t1 MTR_1g021020 30.607 428 249 13 85 491 89 489 2.52e-48 174
MS.gene068213.t1 MTR_3g079620 29.673 428 256 12 85 487 89 496 3.27e-48 174
MS.gene068213.t1 MTR_2g062990 32.775 418 254 13 86 486 52 459 1.85e-47 171
MS.gene068213.t1 MTR_2g063000 32.304 421 254 15 86 486 51 460 5.03e-47 170
MS.gene068213.t1 MTR_1g040370 31.553 412 230 14 85 485 41 411 6.43e-47 168
MS.gene068213.t1 MTR_2g062980 29.888 445 257 14 86 499 52 472 2.05e-46 168
MS.gene068213.t1 MTR_2g081620 29.330 433 277 12 85 499 52 473 9.51e-46 166
MS.gene068213.t1 MTR_8g099930 28.000 425 264 15 86 482 45 455 2.25e-45 165
MS.gene068213.t1 MTR_5g072570 29.604 429 263 12 85 485 40 457 2.60e-44 162
MS.gene068213.t1 MTR_3g034290 29.426 418 262 15 86 486 86 487 7.15e-44 162
MS.gene068213.t1 MTR_0003s0560 29.665 418 259 14 86 486 85 484 9.24e-44 161
MS.gene068213.t1 MTR_7g051430 27.802 464 254 12 88 485 44 492 1.27e-43 161
MS.gene068213.t1 MTR_7g080180 35.907 259 146 6 88 336 42 290 1.34e-43 160
MS.gene068213.t1 MTR_1g095560 29.017 417 260 15 86 480 45 447 1.74e-42 157
MS.gene068213.t1 MTR_7g051430 29.950 404 218 11 88 471 44 402 2.91e-42 155
MS.gene068213.t1 MTR_8g011350 42.564 195 106 2 88 276 45 239 3.75e-42 157
MS.gene068213.t1 MTR_8g011350 42.564 195 106 2 88 276 45 239 6.07e-42 156
MS.gene068213.t1 MTR_4g089155 26.786 448 263 13 85 491 64 487 8.11e-42 156
MS.gene068213.t1 MTR_4g021510 30.993 413 238 15 102 483 68 464 9.31e-42 155
MS.gene068213.t1 MTR_2g018600 26.450 431 270 12 86 482 46 463 9.50e-42 155
MS.gene068213.t1 MTR_3g045770 28.640 419 260 11 90 482 43 448 1.00e-41 155
MS.gene068213.t1 MTR_4g122950 27.842 431 268 13 88 485 53 473 1.06e-41 155
MS.gene068213.t1 MTR_2g012860 27.354 446 263 13 85 491 52 475 1.12e-41 155
MS.gene068213.t1 MTR_4g122960 28.018 439 255 12 88 485 53 471 2.15e-41 155
MS.gene068213.t1 MTR_4g021530 29.227 414 242 15 102 482 69 464 2.32e-41 154
MS.gene068213.t1 MTR_3g090130 28.271 428 264 10 86 485 40 452 2.66e-41 154
MS.gene068213.t1 MTR_4g021520 30.000 410 244 14 102 482 69 464 5.44e-41 153
MS.gene068213.t1 MTR_2g018590 27.103 428 264 12 90 482 49 463 1.18e-40 152
MS.gene068213.t1 MTR_1g095540 28.537 417 262 15 86 480 45 447 1.89e-40 152
MS.gene068213.t1 MTR_3g090150 29.032 434 281 14 85 497 44 471 4.30e-40 151
MS.gene068213.t1 MTR_4g075150 28.806 427 256 13 85 480 45 454 7.09e-40 150
MS.gene068213.t1 MTR_4g021535 29.157 415 241 16 102 482 65 460 8.19e-40 150
MS.gene068213.t1 MTR_4g075150 28.706 425 257 12 85 480 45 452 1.47e-39 149
MS.gene068213.t1 MTR_1g095560 28.153 444 261 18 86 480 45 479 1.84e-39 149
MS.gene068213.t1 MTR_2g012850 27.107 439 257 14 86 485 47 461 2.21e-39 149
MS.gene068213.t1 MTR_4g021500 29.268 410 247 13 102 482 69 464 4.89e-38 149
MS.gene068213.t1 MTR_4g021500 27.805 410 253 12 102 482 504 899 8.77e-36 142
MS.gene068213.t1 MTR_4g021500 29.268 410 247 13 102 482 69 464 5.59e-38 149
MS.gene068213.t1 MTR_4g021500 27.681 401 247 14 102 482 504 881 6.38e-35 139
MS.gene068213.t1 MTR_4g021490 28.846 416 241 17 102 482 69 464 1.66e-37 144
MS.gene068213.t1 MTR_7g013790 26.757 441 255 17 86 485 47 460 5.00e-37 142
MS.gene068213.t1 MTR_2g018630 26.429 420 269 9 90 482 53 459 2.78e-36 140
MS.gene068213.t1 MTR_0003s0560 38.144 194 116 4 86 276 85 277 9.97e-36 136
MS.gene068213.t1 MTR_4g021520 30.481 374 218 13 102 447 69 428 1.23e-34 135
MS.gene068213.t1 MTR_3g034290 36.041 197 123 3 86 279 86 282 1.31e-34 134
MS.gene068213.t1 MTR_4g056520 27.804 428 250 12 95 479 38 449 2.60e-34 134
MS.gene068213.t1 MTR_2g063000 28.469 418 243 15 86 486 51 429 7.41e-33 130
MS.gene068213.t1 MTR_3g100420 34.715 193 120 1 99 285 83 275 3.00e-31 126
MS.gene068213.t1 MTR_2g009200 24.122 427 253 13 90 482 44 433 2.59e-28 117
MS.gene068213.t1 MTR_2g084530 28.182 440 249 15 95 488 38 456 1.78e-27 115
MS.gene068213.t1 MTR_1g102130 23.776 429 247 16 86 482 103 483 2.91e-23 103
MS.gene068213.t1 MTR_2g018630 24.642 349 225 10 157 482 21 354 1.09e-20 94.0
MS.gene068213.t1 MTR_4g021535 35.766 137 71 3 102 221 65 201 5.00e-16 80.5
MS.gene068213.t1 MTR_0075s0010 37.500 104 56 4 86 182 19 120 1.42e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068213.t1 AT3G10410 69.231 481 135 5 28 501 42 516 0.0 690
MS.gene068213.t1 AT3G45010 60.757 502 175 6 3 488 6 501 0.0 626
MS.gene068213.t1 AT5G22980 59.192 495 188 5 4 490 10 498 0.0 595
MS.gene068213.t1 AT5G22960 56.548 168 54 2 80 247 26 174 4.90e-59 193
MS.gene068213.t1 AT1G15000 31.841 402 253 9 90 485 37 423 1.50e-58 200
MS.gene068213.t1 AT4G12910 29.590 463 246 13 88 486 49 495 3.12e-52 184
MS.gene068213.t1 AT1G73300 28.224 411 259 10 90 485 49 438 1.88e-49 176
MS.gene068213.t1 AT1G73300 28.224 411 259 10 90 485 49 438 1.88e-49 176
MS.gene068213.t1 AT3G12203 28.986 414 251 14 90 485 25 413 2.36e-49 175
MS.gene068213.t1 AT3G52020 30.258 466 269 19 48 486 59 495 2.50e-49 177
MS.gene068213.t1 AT3G12203 28.986 414 251 14 90 485 46 434 3.28e-49 175
MS.gene068213.t1 AT3G12203 29.426 401 240 14 103 485 1 376 1.06e-48 172
MS.gene068213.t1 AT4G30810 28.774 424 265 9 86 486 50 459 2.81e-48 174
MS.gene068213.t1 AT1G61130 29.787 470 287 15 44 485 2 456 3.65e-48 173
MS.gene068213.t1 AT2G22980 28.224 411 249 13 90 482 42 424 5.15e-48 172
MS.gene068213.t1 AT1G33540 28.074 431 261 14 90 485 45 461 5.56e-48 172
MS.gene068213.t1 AT1G33540 27.972 429 260 14 92 485 4 418 1.28e-47 170
MS.gene068213.t1 AT1G73310 27.941 408 264 10 90 485 49 438 4.06e-47 169
MS.gene068213.t1 AT3G52010 29.577 426 254 13 86 486 77 481 5.12e-47 170
MS.gene068213.t1 AT3G10450 27.381 420 251 12 90 485 45 434 8.41e-47 169
MS.gene068213.t1 AT5G36180 27.494 411 262 10 90 485 49 438 9.60e-47 168
MS.gene068213.t1 AT3G17180 29.817 436 251 15 88 485 53 471 1.39e-46 169
MS.gene068213.t1 AT2G22970 26.764 411 265 10 90 485 41 430 1.62e-46 167
MS.gene068213.t1 AT1G28110 28.404 426 265 13 86 485 43 454 1.76e-46 168
MS.gene068213.t1 AT1G28110 28.404 426 265 13 86 485 43 454 1.76e-46 168
MS.gene068213.t1 AT1G73280 27.361 413 260 9 90 485 49 438 2.70e-46 167
MS.gene068213.t1 AT3G10450 27.273 418 250 12 92 485 4 391 3.73e-46 166
MS.gene068213.t1 AT2G22920 26.812 414 263 10 90 485 41 432 5.76e-46 166
MS.gene068213.t1 AT1G73290 27.119 413 259 10 90 485 48 435 7.82e-46 166
MS.gene068213.t1 AT3G12240 28.777 417 249 15 90 485 44 433 1.27e-45 165
MS.gene068213.t1 AT2G23010 27.361 413 264 11 90 485 41 434 1.39e-45 165
MS.gene068213.t1 AT2G35770 29.356 419 247 11 85 476 49 445 1.53e-45 166
MS.gene068213.t1 AT3G52000 27.869 488 314 14 23 492 15 482 2.37e-45 166
MS.gene068213.t1 AT2G23010 27.361 413 264 11 90 485 41 434 3.24e-45 164
MS.gene068213.t1 AT2G33530 28.671 429 262 13 86 485 45 458 4.56e-45 164
MS.gene068213.t1 AT1G73270 26.329 414 263 10 90 485 49 438 1.35e-44 162
MS.gene068213.t1 AT1G73270 26.329 414 263 10 90 485 49 438 1.43e-44 163
MS.gene068213.t1 AT2G22980 27.543 403 245 12 90 472 42 417 1.93e-44 162
MS.gene068213.t1 AT5G23210 28.972 428 265 10 86 479 63 485 2.00e-44 163
MS.gene068213.t1 AT3G12230 28.916 415 251 14 90 485 43 432 2.12e-44 162
MS.gene068213.t1 AT2G22980 28.421 380 228 11 90 452 42 394 2.67e-44 161
MS.gene068213.t1 AT4G12910 42.564 195 106 2 88 276 49 243 3.88e-44 162
MS.gene068213.t1 AT3G25420 29.412 476 244 17 88 496 44 494 4.43e-44 162
MS.gene068213.t1 AT2G22990 27.685 419 253 13 90 485 39 430 6.77e-44 160
MS.gene068213.t1 AT1G11080 27.447 470 263 16 69 485 41 485 8.43e-44 162
MS.gene068213.t1 AT1G11080 27.447 470 263 16 69 485 41 485 1.41e-43 161
MS.gene068213.t1 AT4G15100 27.133 457 276 14 67 485 40 477 1.53e-43 160
MS.gene068213.t1 AT3G63470 27.511 458 280 16 43 479 61 487 2.69e-43 160
MS.gene068213.t1 AT1G73290 29.060 351 218 7 90 426 48 381 4.79e-43 157
MS.gene068213.t1 AT3G10450 27.649 387 228 10 90 453 45 402 1.22e-42 157
MS.gene068213.t1 AT1G73310 28.490 351 222 8 90 426 49 384 1.50e-42 157
MS.gene068213.t1 AT5G23210 39.450 218 127 4 86 298 63 280 2.12e-42 157
MS.gene068213.t1 AT4G30610 29.821 446 236 20 86 485 44 458 4.54e-42 156
MS.gene068213.t1 AT5G42230 28.505 428 267 9 86 485 40 456 4.72e-42 156
MS.gene068213.t1 AT5G42230 28.505 428 267 9 86 485 40 456 4.72e-42 156
MS.gene068213.t1 AT2G22970 27.056 377 241 8 90 452 41 397 5.50e-42 155
MS.gene068213.t1 AT3G10450 27.532 385 227 10 92 453 4 359 5.66e-42 154
MS.gene068213.t1 AT2G22970 26.923 390 250 9 90 464 41 410 1.23e-41 154
MS.gene068213.t1 AT3G12220 27.685 419 255 15 90 487 43 434 1.57e-41 154
MS.gene068213.t1 AT1G73290 35.961 203 124 1 90 286 48 250 1.59e-41 151
MS.gene068213.t1 AT3G07990 27.442 430 252 12 85 480 45 448 1.95e-41 154
MS.gene068213.t1 AT2G22920 27.684 354 223 7 90 426 41 378 2.61e-41 153
MS.gene068213.t1 AT3G12220 28.010 407 245 15 102 487 25 404 3.92e-41 152
MS.gene068213.t1 AT2G12480 28.537 417 251 12 86 485 43 429 4.78e-41 153
MS.gene068213.t1 AT5G09640 26.545 437 263 13 90 485 43 462 7.99e-41 153
MS.gene068213.t1 AT2G23000 27.033 418 259 12 90 485 41 434 1.00e-40 152
MS.gene068213.t1 AT2G23000 27.033 418 259 12 90 485 41 434 1.00e-40 152
MS.gene068213.t1 AT2G22990 28.312 385 228 11 90 452 39 397 2.13e-40 150
MS.gene068213.t1 AT2G22990 28.312 385 228 11 90 452 39 397 2.65e-40 151
MS.gene068213.t1 AT2G12480 28.537 410 259 9 86 485 43 428 4.01e-40 150
MS.gene068213.t1 AT2G12480 28.329 413 255 11 86 485 43 427 4.18e-40 150
MS.gene068213.t1 AT2G24010 28.241 432 252 12 86 485 42 447 1.20e-39 149
MS.gene068213.t1 AT2G24000 28.009 432 263 17 86 485 42 457 1.37e-39 149
MS.gene068213.t1 AT2G12480 27.294 436 256 12 86 485 43 453 2.71e-39 149
MS.gene068213.t1 AT2G35780 27.021 433 261 12 77 480 36 442 3.88e-39 148
MS.gene068213.t1 AT3G17180 36.017 236 135 7 87 317 52 276 6.32e-39 147
MS.gene068213.t1 AT1G43780 28.306 431 265 13 86 485 49 466 9.54e-39 147
MS.gene068213.t1 AT5G08260 27.754 472 260 19 63 479 21 466 1.08e-38 147
MS.gene068213.t1 AT1G73280 35.751 193 118 1 90 276 49 241 1.52e-37 142
MS.gene068213.t1 AT2G22990 26.969 419 247 14 90 485 39 421 1.93e-37 142
MS.gene068213.t1 AT2G05850 27.962 422 267 16 86 486 76 481 2.28e-37 144
MS.gene068213.t1 AT2G22970 29.965 287 177 5 90 365 41 314 4.30e-37 139
MS.gene068213.t1 AT3G02110 26.682 431 273 12 86 485 49 467 5.75e-37 142
MS.gene068213.t1 AT5G42240 28.341 434 260 14 86 485 44 460 7.89e-37 142
MS.gene068213.t1 AT2G22980 31.597 288 167 8 90 364 42 312 8.78e-37 139
MS.gene068213.t1 AT2G22920 29.371 286 179 4 90 364 41 314 1.76e-36 137
MS.gene068213.t1 AT2G24010 27.069 447 253 13 86 485 42 462 4.59e-35 137
MS.gene068213.t1 AT3G56540 36.264 182 111 3 46 225 54 232 2.64e-34 130
MS.gene068213.t1 AT3G12220 36.598 194 115 3 90 276 43 235 2.71e-34 133
MS.gene068213.t1 AT5G23210 27.835 388 241 10 126 479 8 390 4.89e-31 124
MS.gene068213.t1 AT5G23210 27.649 387 241 10 127 479 8 389 2.63e-30 122
MS.gene068213.t1 AT2G24010 25.636 472 253 14 86 485 13 458 4.90e-30 122
MS.gene068213.t1 AT2G24010 31.597 288 155 10 86 352 13 279 1.18e-29 119
MS.gene068213.t1 AT1G73280 25.575 348 225 8 149 485 12 336 5.56e-29 117
MS.gene068213.t1 AT2G27920 25.882 425 262 11 101 484 45 457 7.84e-29 119
MS.gene068213.t1 AT5G36180 25.723 346 227 9 149 485 12 336 8.81e-29 117
MS.gene068213.t1 AT5G36180 25.723 346 227 9 149 485 12 336 8.81e-29 117
MS.gene068213.t1 AT5G23210 38.983 177 103 4 127 298 8 184 3.28e-28 115
MS.gene068213.t1 AT2G22990 25.364 343 212 12 160 485 1 316 2.17e-25 107
MS.gene068213.t1 AT1G73280 24.850 334 217 8 163 485 1 311 2.23e-25 106
MS.gene068213.t1 AT2G22990 25.364 343 212 12 160 485 1 316 3.55e-25 106
MS.gene068213.t1 AT1G73310 26.502 283 191 6 149 426 12 282 4.58e-25 106
MS.gene068213.t1 AT5G36180 25.879 313 204 7 149 453 12 304 6.08e-25 105
MS.gene068213.t1 AT5G36180 26.573 286 187 6 149 426 12 282 5.00e-24 103
MS.gene068213.t1 AT2G22980 26.471 306 185 12 160 453 1 278 2.09e-23 100
MS.gene068213.t1 AT2G27920 25.195 385 240 9 136 484 13 385 1.27e-22 100
MS.gene068213.t1 AT2G27920 24.000 350 222 8 171 484 49 390 5.96e-17 83.2

Find 139 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGTCATTCTTTGCATAT+TGG 0.214374 1.4:+36777521 None:intergenic
GATGTTCCCTTTGTTGTTAA+TGG 0.227469 1.4:-36775586 MS.gene068213:CDS
AAATGGCCCTTTCAAGATTA+AGG 0.235424 1.4:-36779285 MS.gene068213:CDS
CATCATCATCATCGGAAATT+AGG 0.236732 1.4:+36779577 None:intergenic
AAAGTCATTCTTTGCATATT+GGG 0.239208 1.4:+36777522 None:intergenic
TCTCTTACGTGGAACAAATA+TGG 0.284906 1.4:-36779254 MS.gene068213:CDS
TGACGTCCGGGAACAAATTA+AGG 0.303739 1.4:+36779682 None:intergenic
GGACACTATATTCCTGCTTT+AGG 0.312182 1.4:-36777475 MS.gene068213:CDS
AAGGTTACACATGCACTTCT+TGG 0.326383 1.4:-36777228 MS.gene068213:CDS
ATGTTCCCTTTGTTGTTAAT+GGG 0.326475 1.4:-36775585 MS.gene068213:CDS
GTGAATCCCGAACCGATTCT+TGG 0.328298 1.4:+36775952 None:intergenic
CAGCATATCTAATGCAGCTT+TGG 0.330927 1.4:+36775009 None:intergenic
CATAGCTGGCGAGGAAATAT+TGG 0.353766 1.4:-36774954 MS.gene068213:CDS
CCCATCTCCAGAGCATAATC+TGG 0.360966 1.4:+36777261 None:intergenic
AGCATATCTAATGCAGCTTT+GGG 0.361552 1.4:+36775010 None:intergenic
CATTAGCTTGGTTTCCTTGA+CGG 0.366556 1.4:+36777443 None:intergenic
GATGTTTCCGTTGATGATTT+TGG 0.370732 1.4:-36779549 MS.gene068213:CDS
TCTGCCACCAGCGTTGATCT+TGG 0.376245 1.4:-36779738 MS.gene068213:CDS
GTCATTGAAAATGAGATTAC+AGG 0.376907 1.4:+36776654 None:intergenic
ATCGATTTACTCATTTATGC+TGG 0.380104 1.4:-36775816 MS.gene068213:CDS
TTTCTGACCGGACCATTTCA+TGG 0.393553 1.4:+36775627 None:intergenic
AAGACGACCCTGTTGTCATT+TGG 0.396175 1.4:-36779355 MS.gene068213:CDS
TTCTGAACCAAGAATCGGTT+CGG 0.397853 1.4:-36775959 MS.gene068213:CDS
TAGGCTTTATACTGAATTGC+AGG 0.399291 1.4:+36777285 None:intergenic
TTGTATGTTGATCAACCAAC+TGG 0.406197 1.4:-36778671 MS.gene068213:CDS
CCTGTTGTCATTTGGTTGAC+TGG 0.409521 1.4:-36779347 MS.gene068213:CDS
AGGGATTGGCCATTGGTAAT+GGG 0.409584 1.4:-36777317 MS.gene068213:CDS
CAGGGATTGGCCATTGGTAA+TGG 0.412483 1.4:-36777318 MS.gene068213:CDS
GAGAGACCTTAATTTGTTCC+CGG 0.417071 1.4:-36779688 MS.gene068213:CDS
GCTGCAAATTCATCTTCTCT+TGG 0.422398 1.4:-36779633 MS.gene068213:CDS
CCAGTCAACCAAATGACAAC+AGG 0.427275 1.4:+36779347 None:intergenic
TGATATTCGTCATAATGAAA+AGG 0.431549 1.4:-36778618 MS.gene068213:CDS
AGGAATTCATATAAATTTGA+AGG 0.435694 1.4:-36777419 MS.gene068213:intron
ATTTGGTTGACTGGAGGACC+TGG 0.436159 1.4:-36779338 MS.gene068213:CDS
ACCTGGCTGTAGTAGTGAAT+TGG 0.438228 1.4:-36779321 MS.gene068213:CDS
TCTGAACCAAGAATCGGTTC+GGG 0.438534 1.4:-36775958 MS.gene068213:CDS
TATGAATTCCTTCATTAGCT+TGG 0.439278 1.4:+36777431 None:intergenic
GTTGTTAATGGGTCAGAAGC+TGG 0.442820 1.4:-36775574 MS.gene068213:CDS
CAATATTTCCTCGCCAGCTA+TGG 0.445712 1.4:+36774955 None:intergenic
GCAGCTTTGGGCTGGTCCAT+TGG 0.446131 1.4:+36775022 None:intergenic
GTTGATCAACCAACTGGAAC+TGG 0.446905 1.4:-36778665 MS.gene068213:CDS
CCCAGATTATGCTCTGGAGA+TGG 0.447662 1.4:-36777262 MS.gene068213:CDS
TTAACAACAAAGGGAACATC+AGG 0.458256 1.4:+36775589 None:intergenic
AATATGATCTCATATGCAAC+TGG 0.462944 1.4:-36775791 MS.gene068213:CDS
CTTTACTTACTTTGCAGCAT+GGG 0.465561 1.4:+36779494 None:intergenic
TTGGTTGATCAACATACAAA+AGG 0.467873 1.4:+36778675 None:intergenic
TGAAGTTTATATTGCTATGT+TGG 0.474354 1.4:-36775892 MS.gene068213:CDS
GATGGGTTCATGCCATGAAA+TGG 0.475394 1.4:-36775639 MS.gene068213:CDS
TGCAGCATGGGAATGTTGAA+TGG 0.478923 1.4:+36779506 None:intergenic
ATATTGCTATGTTGGTTGAC+TGG 0.480052 1.4:-36775884 MS.gene068213:CDS
TCGATTTACTCATTTATGCT+GGG 0.480146 1.4:-36775815 MS.gene068213:CDS
AATGACATCTTGTTACATGC+TGG 0.480181 1.4:-36776637 MS.gene068213:CDS
AATGACTAGGTAATTCAAGA+TGG 0.481921 1.4:-36775657 MS.gene068213:intron
TTGGGGATGCTCTGCAAAGA+AGG 0.485380 1.4:+36777540 None:intergenic
CGATGTTGAGGTTGACGTCC+GGG 0.486748 1.4:+36779670 None:intergenic
AAAGTTTCTGAACCAAGAAT+CGG 0.491136 1.4:-36775964 MS.gene068213:CDS
ATTCCTATCCTTCTTGAGGA+TGG 0.491791 1.4:-36775840 MS.gene068213:CDS
GTTGGTTCCAGCCTGTGAAT+TGG 0.501046 1.4:-36777199 MS.gene068213:CDS
TACGTGGAACAAATATGGTT+GGG 0.502626 1.4:-36779249 MS.gene068213:CDS
GGCTACAAATTCTTTCTGAC+CGG 0.502694 1.4:+36775615 None:intergenic
AATTAGGTTACGAAACTTGA+GGG 0.503640 1.4:+36779593 None:intergenic
GATATTCGTCATAATGAAAA+GGG 0.503932 1.4:-36778617 MS.gene068213:CDS
GCGATGTTGAGGTTGACGTC+CGG 0.506704 1.4:+36779669 None:intergenic
ATTACAGGTGAATCATATGC+TGG 0.508727 1.4:-36777496 MS.gene068213:CDS
CCAGATTATGCTCTGGAGAT+GGG 0.509495 1.4:-36777261 MS.gene068213:CDS
TAGCTTTATTGCCAATTCAC+AGG 0.510290 1.4:+36777188 None:intergenic
AAGTCATTCTTTGCATATTG+GGG 0.511520 1.4:+36777523 None:intergenic
TTTGAACAGGGATTGGCCAT+TGG 0.517096 1.4:-36777324 MS.gene068213:intron
GAATCGGTTCGGGATTCACT+AGG 0.517338 1.4:-36775948 MS.gene068213:CDS
ACCCTTGCTGAATCCATAGC+TGG 0.518737 1.4:-36774968 MS.gene068213:CDS
TGGTATTCCTATCCTTCTTG+AGG 0.521005 1.4:-36775844 MS.gene068213:CDS
ATATGCTGAAGAAGTGGACT+CGG 0.522178 1.4:-36774994 MS.gene068213:CDS
TATCTAATGCAGCTTTGGGC+TGG 0.523690 1.4:+36775014 None:intergenic
CTATGTTGGTTGACTGGATG+AGG 0.524378 1.4:-36775878 MS.gene068213:CDS
GCAGCATGGGAATGTTGAAT+GGG 0.527429 1.4:+36779507 None:intergenic
TCTGACCCATTAACAACAAA+GGG 0.527793 1.4:+36775580 None:intergenic
AAGTCATCCTTAATCTTGAA+AGG 0.529663 1.4:+36779278 None:intergenic
TGCACTTCTTGGCAAAGTGT+TGG 0.533774 1.4:-36777217 MS.gene068213:CDS
GAACCATGTGACCCGCATCA+TGG 0.535254 1.4:+36775044 None:intergenic
TTTATTGCCAATTCACAGGC+TGG 0.539098 1.4:+36777192 None:intergenic
AGCCTACCCAGATTATGCTC+TGG 0.544480 1.4:-36777268 MS.gene068213:CDS
GTTCATGCCATGAAATGGTC+CGG 0.550483 1.4:-36775634 MS.gene068213:CDS
CAAGGAAACCAAGCTAATGA+AGG 0.552843 1.4:-36777439 MS.gene068213:CDS
GCTTTACTTACTTTGCAGCA+TGG 0.553141 1.4:+36779493 None:intergenic
GATCTCATATGCAACTGGCT+TGG 0.557985 1.4:-36775786 MS.gene068213:intron
ATGACTAGGTAATTCAAGAT+GGG 0.559235 1.4:-36775656 MS.gene068213:intron
ATTCCATCCTCAAGAAGGAT+AGG 0.559975 1.4:+36775837 None:intergenic
AATCGGTTCGGGATTCACTA+GGG 0.561324 1.4:-36775947 MS.gene068213:CDS
TTACGTGGAACAAATATGGT+TGG 0.561904 1.4:-36779250 MS.gene068213:CDS
CGATTTACTCATTTATGCTG+GGG 0.564051 1.4:-36775814 MS.gene068213:CDS
CATTAGATATGCTGAAGAAG+TGG 0.565310 1.4:-36775000 MS.gene068213:CDS
TTCTGACCCATTAACAACAA+AGG 0.566210 1.4:+36775579 None:intergenic
AATCGATTCCATCCTCAAGA+AGG 0.566331 1.4:+36775832 None:intergenic
TTAATCCTTTCAGGAACCGA+TGG 0.568592 1.4:-36776706 MS.gene068213:intron
GTTCGGGATTCACTAGGGGT+TGG 0.569789 1.4:-36775942 MS.gene068213:CDS
TGCGGGTCACATGGTTCCAA+TGG 0.570155 1.4:-36775038 MS.gene068213:CDS
GGTCCATGATGCGGGTCACA+TGG 0.570682 1.4:-36775047 MS.gene068213:CDS
CGCCAGCTATGGATTCAGCA+AGG 0.571133 1.4:+36774966 None:intergenic
CAACAGGGTCGTCTTCCTTG+TGG 0.572959 1.4:+36779363 None:intergenic
TATGCTGAAGAAGTGGACTC+GGG 0.574701 1.4:-36774993 MS.gene068213:CDS
CGGATACGAGATCCTAAAGC+AGG 0.575255 1.4:+36777463 None:intergenic
GCCAATTCACTACTACAGCC+AGG 0.578085 1.4:+36779320 None:intergenic
CCATCTCCAGAGCATAATCT+GGG 0.580045 1.4:+36777262 None:intergenic
TAGCTAAAGCCAGTTCCAGT+TGG 0.580990 1.4:+36778656 None:intergenic
CAGAAACAGAAGCGATGTTG+AGG 0.581531 1.4:+36779658 None:intergenic
AGTCATCCTTAATCTTGAAA+GGG 0.582116 1.4:+36779279 None:intergenic
GATATCAGAAAGAAGTGTGA+GGG 0.585311 1.4:-36776017 MS.gene068213:CDS
TACAGGCTACATTTGCACTC+AGG 0.586897 1.4:+36776671 None:intergenic
ATCAGTAAGCCCATTACCAA+TGG 0.587174 1.4:+36777308 None:intergenic
TGCTGAATCCATAGCTGGCG+AGG 0.588539 1.4:-36774963 MS.gene068213:CDS
CTTTGAATCACGCAACCACA+AGG 0.596723 1.4:-36779378 MS.gene068213:CDS
AAATTAGGTTACGAAACTTG+AGG 0.598128 1.4:+36779592 None:intergenic
CGGTCCTCTGAGTTTCCTGA+AGG 0.598550 1.4:-36775536 MS.gene068213:intron
GCTGGAATATTGAAGAGCTA+CGG 0.609644 1.4:-36775556 MS.gene068213:CDS
GTTGTCATTTGGTTGACTGG+AGG 0.619240 1.4:-36779344 MS.gene068213:CDS
GAACAAATATGGTTGGGACA+AGG 0.622182 1.4:-36779243 MS.gene068213:intron
TGGATGAGGAATCTTGAAGT+TGG 0.623331 1.4:-36775864 MS.gene068213:CDS
GGAGATGGGCTTAATTACAA+AGG 0.623964 1.4:-36777247 MS.gene068213:CDS
GCCAGCTATGGATTCAGCAA+GGG 0.625815 1.4:+36774967 None:intergenic
ATCGGTTCGGGATTCACTAG+GGG 0.625822 1.4:-36775946 MS.gene068213:CDS
TTAGGATCTCGTATCCGTCA+AGG 0.627475 1.4:-36777457 MS.gene068213:CDS
CTTCAGTCCAAGATCAACGC+TGG 0.630952 1.4:+36779731 None:intergenic
ATATCAGAAAGAAGTGTGAG+GGG 0.638294 1.4:-36776016 MS.gene068213:CDS
CAGTCCAAGATCAACGCTGG+TGG 0.639016 1.4:+36779734 None:intergenic
CTCCAGAGCATAATCTGGGT+AGG 0.642613 1.4:+36777266 None:intergenic
TAACAACAAAGGGAACATCA+GGG 0.648660 1.4:+36775590 None:intergenic
ATAGTGACCAAAATCATCAA+CGG 0.652528 1.4:+36779542 None:intergenic
TGATCTTGGACTGAAGCTTG+AGG 0.655721 1.4:-36779724 MS.gene068213:CDS
TGATATCAGAAAGAAGTGTG+AGG 0.656459 1.4:-36776018 MS.gene068213:CDS
AACAACAAAGGGAACATCAG+GGG 0.657286 1.4:+36775591 None:intergenic
AGGATGACTTGTCTCTTACG+TGG 0.658153 1.4:-36779265 MS.gene068213:CDS
ATTAGGTTACGAAACTTGAG+GGG 0.664091 1.4:+36779594 None:intergenic
ATGCTGAAGAAGTGGACTCG+GGG 0.674515 1.4:-36774992 MS.gene068213:CDS
AACAAAGGGAACATCAGGGG+AGG 0.678229 1.4:+36775594 None:intergenic
CAGTCAACCAAATGACAACA+GGG 0.680746 1.4:+36779348 None:intergenic
GACATCTTGTTACATGCTGG+AGG 0.702916 1.4:-36776634 MS.gene068213:CDS
CAGCATGGGAATGTTGAATG+GGG 0.724539 1.4:+36779508 None:intergenic
GATACCTTCAGGAAACTCAG+AGG 0.734219 1.4:+36775532 None:intergenic
GAATTGGCAATAAAGCTATG+CGG 0.772207 1.4:-36777183 MS.gene068213:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGATAAGAAAATATTTA+GGG + chr1.4:36777857-36777876 None:intergenic 10.0%
!! AATATAAAAGGAATTTAAAT+AGG + chr1.4:36776346-36776365 None:intergenic 10.0%
!! ATATAAAAGGAATTTAAATA+GGG + chr1.4:36776345-36776364 None:intergenic 10.0%
!!! AATCTAAAAATGAAATTTTT+TGG + chr1.4:36776569-36776588 None:intergenic 10.0%
!!! AATTTAGAGTAAAAAAATTA+CGG - chr1.4:36777051-36777070 MS.gene068213:intron 10.0%
!! ACTAATTCAATTTCTTAATA+GGG - chr1.4:36776675-36776694 MS.gene068213:CDS 15.0%
!! AGGATTAAAACAAATATTAA+AGG + chr1.4:36778008-36778027 None:intergenic 15.0%
!! GAAATGATAAGAAAATATTT+AGG + chr1.4:36777858-36777877 None:intergenic 15.0%
!!! ATTTAGAGTAAAAAAATTAC+GGG - chr1.4:36777052-36777071 MS.gene068213:intron 15.0%
!!! GAGTTTTTTTTTTATTCAAT+AGG - chr1.4:36778447-36778466 MS.gene068213:intron 15.0%
!!! TAGTTTTGTCAAAATATAAA+AGG + chr1.4:36776358-36776377 None:intergenic 15.0%
!!! TTAGATTTGTTTAAAAATGA+AGG + chr1.4:36777830-36777849 None:intergenic 15.0%
!!! TTTTTAATTAAGAGGTTTTA+TGG - chr1.4:36778546-36778565 MS.gene068213:intron 15.0%
!! AAAGAGAAAAATGTGAAATT+AGG + chr1.4:36775512-36775531 None:intergenic 20.0%
!! AGCAAAACAATAAATGATTT+GGG + chr1.4:36779616-36779635 None:intergenic 20.0%
!! AGGAATTCATATAAATTTGA+AGG - chr1.4:36777307-36777326 MS.gene068213:CDS 20.0%
!! ATTTACTGTGTAATAAAAAC+AGG - chr1.4:36779658-36779677 MS.gene068213:CDS 20.0%
!! CAACACATATATTTCATAAA+AGG + chr1.4:36775306-36775325 None:intergenic 20.0%
!! CACTAATTCAATTTCTTAAT+AGG - chr1.4:36776674-36776693 MS.gene068213:CDS 20.0%
!! CTCTTAATTAAAAACTATTG+TGG + chr1.4:36778540-36778559 None:intergenic 20.0%
!! CTGTCATAAATAATTATCAA+AGG + chr1.4:36775998-36776017 None:intergenic 20.0%
!! TAAGAAATTGAATTAGTGAA+TGG + chr1.4:36776672-36776691 None:intergenic 20.0%
!! TCAAAAGAAAAAAGAAAAAC+AGG + chr1.4:36777909-36777928 None:intergenic 20.0%
!! TTCAGTTATAAGTAGAATTA+GGG + chr1.4:36776281-36776300 None:intergenic 20.0%
!! TTCTAATTAATCAGTTTATC+AGG - chr1.4:36778291-36778310 MS.gene068213:intron 20.0%
!!! AAGAATGACTTTTTTATTAC+AGG - chr1.4:36777215-36777234 MS.gene068213:CDS 20.0%
!!! ATATTTGTTTTAATCCTTTC+AGG - chr1.4:36778011-36778030 MS.gene068213:intron 20.0%
!!! ATCATAATTTTCAATGAGTA+AGG - chr1.4:36776625-36776644 MS.gene068213:intron 20.0%
!!! ATTGTTTCTAACTTTTGAAA+TGG - chr1.4:36776451-36776470 MS.gene068213:intron 20.0%
!!! CACAATAGTTTTTAATTAAG+AGG - chr1.4:36778538-36778557 MS.gene068213:intron 20.0%
!!! CTAAATACAGTGTTTTAATT+TGG - chr1.4:36776375-36776394 MS.gene068213:intron 20.0%
!!! GAAACATTCTGATTTTATAT+AGG - chr1.4:36777353-36777372 MS.gene068213:intron 20.0%
!!! GTCTTATTCTTTTTCAAATA+TGG + chr1.4:36776708-36776727 None:intergenic 20.0%
!!! TATTTTTAATGGTTTGAACA+GGG - chr1.4:36777390-36777409 MS.gene068213:intron 20.0%
!!! TTATTTTTAATGGTTTGAAC+AGG - chr1.4:36777389-36777408 MS.gene068213:intron 20.0%
!!! TTGTTTCTAACTTTTGAAAT+GGG - chr1.4:36776452-36776471 MS.gene068213:intron 20.0%
!!! TTTTTTTAATTTTTTCCCTC+AGG - chr1.4:36777163-36777182 MS.gene068213:intron 20.0%
! AAAAGTCATTCTTTGCATAT+TGG + chr1.4:36777208-36777227 None:intergenic 25.0%
! AAAGCCAGAATGTTAAAATT+GGG - chr1.4:36779454-36779473 MS.gene068213:intron 25.0%
! AAAGTCATTCTTTGCATATT+GGG + chr1.4:36777207-36777226 None:intergenic 25.0%
! AGATATCTCAATATGAGTAA+AGG + chr1.4:36776821-36776840 None:intergenic 25.0%
! AGCAAGTTTATACTATTATG+TGG - chr1.4:36775589-36775608 MS.gene068213:CDS 25.0%
! AGCAAGTTTATATTTGATCA+TGG + chr1.4:36779538-36779557 None:intergenic 25.0%
! ATTTAATCAGCACTATTGAA+TGG + chr1.4:36779358-36779377 None:intergenic 25.0%
! CAATGATCATGTAAACTTTA+AGG - chr1.4:36777610-36777629 MS.gene068213:intron 25.0%
! CCATTAAAAATAAGATACAC+TGG + chr1.4:36777382-36777401 None:intergenic 25.0%
! CTTAAAGTTTACATGATCAT+TGG + chr1.4:36777612-36777631 None:intergenic 25.0%
! CTTCAGTTATAAGTAGAATT+AGG + chr1.4:36776282-36776301 None:intergenic 25.0%
! GAGCAAAACAATAAATGATT+TGG + chr1.4:36779617-36779636 None:intergenic 25.0%
! GATATTCGTCATAATGAAAA+GGG - chr1.4:36776109-36776128 MS.gene068213:intron 25.0%
! TAAAGCCAGAATGTTAAAAT+TGG - chr1.4:36779453-36779472 MS.gene068213:intron 25.0%
! TGAAGTTTATATTGCTATGT+TGG - chr1.4:36778834-36778853 MS.gene068213:intron 25.0%
! TGATATTCGTCATAATGAAA+AGG - chr1.4:36776108-36776127 MS.gene068213:intron 25.0%
! TTAATCAGTTTATCAGGATT+TGG - chr1.4:36778297-36778316 MS.gene068213:intron 25.0%
! TTGAATCATAAAACTACTGT+TGG - chr1.4:36777688-36777707 MS.gene068213:intron 25.0%
!! AATGAATTTTGTTCAAAGCT+TGG + chr1.4:36777798-36777817 None:intergenic 25.0%
!! ATTCAATTTTATATCCCTTG+CGG + chr1.4:36777674-36777693 None:intergenic 25.0%
!!! ACAGTGTTTTAATTTGGTAA+AGG - chr1.4:36776381-36776400 MS.gene068213:intron 25.0%
!!! ATGTTTTGAGTAAAATCGAA+AGG - chr1.4:36775548-36775567 MS.gene068213:CDS 25.0%
!!! CCAGTGTATCTTATTTTTAA+TGG - chr1.4:36777379-36777398 MS.gene068213:intron 25.0%
!!! GAAATATATGTGTTGTTTGT+AGG - chr1.4:36775311-36775330 MS.gene068213:intron 25.0%
!!! TGTTTCTAACTTTTGAAATG+GGG - chr1.4:36776453-36776472 MS.gene068213:intron 25.0%
!!! TGTTTTGAGTAAAATCGAAA+GGG - chr1.4:36775549-36775568 MS.gene068213:CDS 25.0%
!!! TTTTAAAACCATTATCTCCA+GGG + chr1.4:36775631-36775650 None:intergenic 25.0%
AAAGTTTCTGAACCAAGAAT+CGG - chr1.4:36778762-36778781 MS.gene068213:intron 30.0%
AAATTAGGTTACGAAACTTG+AGG + chr1.4:36775137-36775156 None:intergenic 30.0%
AAGAATGAGTACTTAGTGTT+GGG + chr1.4:36778345-36778364 None:intergenic 30.0%
AAGAGAATCATATAGAAGGA+AGG + chr1.4:36775282-36775301 None:intergenic 30.0%
AAGTCATCCTTAATCTTGAA+AGG + chr1.4:36775451-36775470 None:intergenic 30.0%
AAGTCATTCTTTGCATATTG+GGG + chr1.4:36777206-36777225 None:intergenic 30.0%
AATACAGAAAGCAATTGTCA+AGG + chr1.4:36775967-36775986 None:intergenic 30.0%
AATCTATGTGAAAGAGAGTA+TGG + chr1.4:36776900-36776919 None:intergenic 30.0%
AATGACTAGGTAATTCAAGA+TGG - chr1.4:36779069-36779088 MS.gene068213:intron 30.0%
AATTAGGGAAGGAAAATAGT+GGG + chr1.4:36776266-36776285 None:intergenic 30.0%
AATTAGGTTACGAAACTTGA+GGG + chr1.4:36775136-36775155 None:intergenic 30.0%
ACTACCAAAATTACCAACAT+TGG + chr1.4:36776503-36776522 None:intergenic 30.0%
AGGAAAGAGAATCATATAGA+AGG + chr1.4:36775286-36775305 None:intergenic 30.0%
AGTCATCCTTAATCTTGAAA+GGG + chr1.4:36775450-36775469 None:intergenic 30.0%
ATAGTGACCAAAATCATCAA+CGG + chr1.4:36775187-36775206 None:intergenic 30.0%
ATCATCATCATCATCATCAT+CGG + chr1.4:36775160-36775179 None:intergenic 30.0%
ATCTTTGAATAATGAGACGA+TGG - chr1.4:36779022-36779041 MS.gene068213:intron 30.0%
ATGACTAGGTAATTCAAGAT+GGG - chr1.4:36779070-36779089 MS.gene068213:intron 30.0%
GATTCTTGACAATTTACTTC+TGG + chr1.4:36777882-36777901 None:intergenic 30.0%
GCAATCTTGAAGCAATATAT+GGG - chr1.4:36778637-36778656 MS.gene068213:CDS 30.0%
GTCATTGAAAATGAGATTAC+AGG + chr1.4:36778075-36778094 None:intergenic 30.0%
GTTATAAGTAGAATTAGGGA+AGG + chr1.4:36776277-36776296 None:intergenic 30.0%
TAAAGACACTCACTTCATTA+AGG + chr1.4:36775906-36775925 None:intergenic 30.0%
TAAGAATGAGTACTTAGTGT+TGG + chr1.4:36778346-36778365 None:intergenic 30.0%
TAATGAAGTGAGTGTCTTTA+CGG - chr1.4:36775906-36775925 MS.gene068213:CDS 30.0%
TACAGTTCAAGCAATCTATT+TGG - chr1.4:36778232-36778251 MS.gene068213:intron 30.0%
TACTATCAACTTACCAATGT+TGG - chr1.4:36776487-36776506 MS.gene068213:intron 30.0%
TACTGAATGCTTATATTGTG+CGG - chr1.4:36779489-36779508 MS.gene068213:intron 30.0%
TATGAATTCCTTCATTAGCT+TGG + chr1.4:36777298-36777317 None:intergenic 30.0%
TCCAAGTCCTATAAATCAAA+GGG - chr1.4:36776871-36776890 MS.gene068213:intron 30.0%
TCGATTTACTCATTTATGCT+GGG - chr1.4:36778911-36778930 MS.gene068213:intron 30.0%
TGATTAATTAGAACTCTCCA+TGG + chr1.4:36778284-36778303 None:intergenic 30.0%
TGCAATCTTGAAGCAATATA+TGG - chr1.4:36778636-36778655 MS.gene068213:CDS 30.0%
TGCTAAAATACTGTATACCA+TGG - chr1.4:36778264-36778283 MS.gene068213:intron 30.0%
TTCCAAGTCCTATAAATCAA+AGG - chr1.4:36776870-36776889 MS.gene068213:intron 30.0%
TTCTACTTATAACTGAAGAG+TGG - chr1.4:36776284-36776303 MS.gene068213:intron 30.0%
TTGGATGCAATGTTGAAATT+GGG + chr1.4:36779385-36779404 None:intergenic 30.0%
TTGGTTGATCAACATACAAA+AGG + chr1.4:36776054-36776073 None:intergenic 30.0%
TTTGGATGCAATGTTGAAAT+TGG + chr1.4:36779386-36779405 None:intergenic 30.0%
! AGATATATGAAGTGTCTTTC+TGG + chr1.4:36779592-36779611 None:intergenic 30.0%
! ATCGATTTACTCATTTATGC+TGG - chr1.4:36778910-36778929 MS.gene068213:intron 30.0%
! ATCTTAGTGCAATTCTAAAG+AGG - chr1.4:36776204-36776223 MS.gene068213:intron 30.0%
! TCTTAGTGCAATTCTAAAGA+GGG - chr1.4:36776205-36776224 MS.gene068213:intron 30.0%
! TTTTAATCAGCACTTGTAAC+AGG - chr1.4:36779327-36779346 MS.gene068213:CDS 30.0%
! TTTTCTGTAGTACAATGACA+TGG - chr1.4:36779558-36779577 MS.gene068213:CDS 30.0%
! TTTTGTCATCGCTAATGATT+TGG + chr1.4:36779404-36779423 None:intergenic 30.0%
!! AAATTTGTTGCCAATTCTGT+AGG - chr1.4:36776021-36776040 MS.gene068213:CDS 30.0%
!! ACAAGTGCTGATTAAAAGTT+GGG + chr1.4:36779324-36779343 None:intergenic 30.0%
!! ACATTGGTAAGTTGATAGTA+TGG + chr1.4:36776487-36776506 None:intergenic 30.0%
!! ATGTTCCCTTTGTTGTTAAT+GGG - chr1.4:36779141-36779160 MS.gene068213:intron 30.0%
!! CTGCTATGATTTTTCAAACA+TGG - chr1.4:36778738-36778757 MS.gene068213:intron 30.0%
!! GTTTTGAGTAAAATCGAAAG+GGG - chr1.4:36775550-36775569 MS.gene068213:CDS 30.0%
!! TACAAGTGCTGATTAAAAGT+TGG + chr1.4:36779325-36779344 None:intergenic 30.0%
!! TTTTAGAAGAGAAACAGGTT+TGG + chr1.4:36777932-36777951 None:intergenic 30.0%
!! TTTTGAGTAAAATCGAAAGG+GGG - chr1.4:36775551-36775570 MS.gene068213:CDS 30.0%
!!! ATTGGTTTTAGAAGAGAAAC+AGG + chr1.4:36777937-36777956 None:intergenic 30.0%
!!! CTTACCAATGTTGGTAATTT+TGG - chr1.4:36776496-36776515 MS.gene068213:intron 30.0%
!!! GTTTTAAAACCATTATCTCC+AGG + chr1.4:36775632-36775651 None:intergenic 30.0%
!!! TTGGCTTTGTTTTACGAAAA+TGG - chr1.4:36775424-36775443 MS.gene068213:intron 30.0%
AAATGGCCCTTTCAAGATTA+AGG - chr1.4:36775441-36775460 MS.gene068213:intron 35.0%
AAATTCGAACAGGTCTCATA+TGG + chr1.4:36776964-36776983 None:intergenic 35.0%
AAGTTAGAAACAATCCCTCT+AGG + chr1.4:36776445-36776464 None:intergenic 35.0%
AATGAAGTGAGTGTCTTTAC+GGG - chr1.4:36775907-36775926 MS.gene068213:CDS 35.0%
AATGACATCTTGTTACATGC+TGG - chr1.4:36778089-36778108 MS.gene068213:intron 35.0%
ACTAATCGACAAACAAGAAG+AGG + chr1.4:36777716-36777735 None:intergenic 35.0%
ACTCAAGTTTAAATCCCACT+GGG - chr1.4:36776419-36776438 MS.gene068213:intron 35.0%
ACTGAATGCTTATATTGTGC+GGG - chr1.4:36779490-36779509 MS.gene068213:intron 35.0%
AGAGAAAGATAGATACCTTC+AGG + chr1.4:36779208-36779227 None:intergenic 35.0%
AGCATATCTAATGCAGCTTT+GGG + chr1.4:36779719-36779738 None:intergenic 35.0%
AGGAGAAGATTCTTAACAAG+CGG + chr1.4:36777964-36777983 None:intergenic 35.0%
ATAAAAACAGGTCCATGATG+CGG - chr1.4:36779670-36779689 MS.gene068213:CDS 35.0%
ATGAAAGCTCATTGAGAATG+AGG - chr1.4:36778195-36778214 MS.gene068213:intron 35.0%
ATGGTATGGTTTCAATGACT+AGG - chr1.4:36779056-36779075 MS.gene068213:intron 35.0%
ATTACAGGTGAATCATATGC+TGG - chr1.4:36777230-36777249 MS.gene068213:CDS 35.0%
ATTAGGTTACGAAACTTGAG+GGG + chr1.4:36775135-36775154 None:intergenic 35.0%
CATCATCATCATCGGAAATT+AGG + chr1.4:36775152-36775171 None:intergenic 35.0%
CATTAGATATGCTGAAGAAG+TGG - chr1.4:36779726-36779745 MS.gene068213:CDS 35.0%
CGATTTACTCATTTATGCTG+GGG - chr1.4:36778912-36778931 MS.gene068213:intron 35.0%
CTTTACTTACTTTGCAGCAT+GGG + chr1.4:36775235-36775254 None:intergenic 35.0%
GAATCATATAGAAGGAAGGA+AGG + chr1.4:36775278-36775297 None:intergenic 35.0%
GAATTAGGGAAGGAAAATAG+TGG + chr1.4:36776267-36776286 None:intergenic 35.0%
GAATTGGCAATAAAGCTATG+CGG - chr1.4:36777543-36777562 MS.gene068213:CDS 35.0%
GTGTGTACAAAACAGACTTT+GGG + chr1.4:36778388-36778407 None:intergenic 35.0%
TAACAACAAAGGGAACATCA+GGG + chr1.4:36779139-36779158 None:intergenic 35.0%
TACGTGGAACAAATATGGTT+GGG - chr1.4:36775477-36775496 MS.gene068213:intron 35.0%
TACTCAAGTTTAAATCCCAC+TGG - chr1.4:36776418-36776437 MS.gene068213:intron 35.0%
TATTCAATAGGAACCGATCT+CGG - chr1.4:36778459-36778478 MS.gene068213:intron 35.0%
TCTCAATGAGCTTTCATGTA+AGG + chr1.4:36778192-36778211 None:intergenic 35.0%
TCTCTTACGTGGAACAAATA+TGG - chr1.4:36775472-36775491 MS.gene068213:intron 35.0%
TCTGACCCATTAACAACAAA+GGG + chr1.4:36779149-36779168 None:intergenic 35.0%
TGGATGCAATGTTGAAATTG+GGG + chr1.4:36779384-36779403 None:intergenic 35.0%
TGGTAGTCAAGCTATTCATA+GGG - chr1.4:36776516-36776535 MS.gene068213:intron 35.0%
TGTTCGAATTTGCAGAAAAC+TGG - chr1.4:36776973-36776992 MS.gene068213:intron 35.0%
TTAACAACAAAGGGAACATC+AGG + chr1.4:36779140-36779159 None:intergenic 35.0%
TTAATGGTTTGAACAGGGAT+TGG - chr1.4:36777395-36777414 MS.gene068213:intron 35.0%
TTACGTGGAACAAATATGGT+TGG - chr1.4:36775476-36775495 MS.gene068213:intron 35.0%
TTCTGACCCATTAACAACAA+AGG + chr1.4:36779150-36779169 None:intergenic 35.0%
TTCTGTTTGTAAAATCCCGT+AGG + chr1.4:36777651-36777670 None:intergenic 35.0%
TTGTATGTTGATCAACCAAC+TGG - chr1.4:36776055-36776074 MS.gene068213:intron 35.0%
TTTATCTCAGTAGAGTCGAA+CGG - chr1.4:36777108-36777127 MS.gene068213:intron 35.0%
TTTGAGTAAAATCGAAAGGG+GGG - chr1.4:36775552-36775571 MS.gene068213:CDS 35.0%
! AGTTTTCTGCAAATTCGAAC+AGG + chr1.4:36776974-36776993 None:intergenic 35.0%
! ATATCAGAAAGAAGTGTGAG+GGG - chr1.4:36778710-36778729 MS.gene068213:intron 35.0%
! ATATTGCTATGTTGGTTGAC+TGG - chr1.4:36778842-36778861 MS.gene068213:intron 35.0%
! ATGGATGCCCTTTGATTTAT+AGG + chr1.4:36776881-36776900 None:intergenic 35.0%
! ATTTTACAAACAGAACCGCA+AGG - chr1.4:36777656-36777675 MS.gene068213:intron 35.0%
! GATATCAGAAAGAAGTGTGA+GGG - chr1.4:36778709-36778728 MS.gene068213:intron 35.0%
! TACAAAACAGACTTTGGGTT+TGG + chr1.4:36778383-36778402 None:intergenic 35.0%
! TAGGCTTTATACTGAATTGC+AGG + chr1.4:36777444-36777463 None:intergenic 35.0%
! TGATATCAGAAAGAAGTGTG+AGG - chr1.4:36778708-36778727 MS.gene068213:intron 35.0%
! TGTGAGCATTGTAAATTGCA+GGG + chr1.4:36778488-36778507 None:intergenic 35.0%
! TGTTCATTTTGTTCTGCTTG+TGG - chr1.4:36774953-36774972 MS.gene068213:CDS 35.0%
! TTGGTAGTCAAGCTATTCAT+AGG - chr1.4:36776515-36776534 MS.gene068213:intron 35.0%
! TTTTACAAACAGAACCGCAA+GGG - chr1.4:36777657-36777676 MS.gene068213:intron 35.0%
!! AAGTGCTGATTAAAAGTTGG+GGG + chr1.4:36779322-36779341 None:intergenic 35.0%
!! CAAGTGCTGATTAAAAGTTG+GGG + chr1.4:36779323-36779342 None:intergenic 35.0%
!! CACCAACTGAGATTTTAAAG+TGG - chr1.4:36776785-36776804 MS.gene068213:intron 35.0%
!! CACTCCCAATTTTAACATTC+TGG + chr1.4:36779461-36779480 None:intergenic 35.0%
!! CACTTTAAAATCTCAGTTGG+TGG + chr1.4:36776787-36776806 None:intergenic 35.0%
!! GATGTTCCCTTTGTTGTTAA+TGG - chr1.4:36779140-36779159 MS.gene068213:intron 35.0%
!! GCAAGTATTGTTTCTGAACT+CGG + chr1.4:36776732-36776751 None:intergenic 35.0%
!! GTCCACTTTAAAATCTCAGT+TGG + chr1.4:36776790-36776809 None:intergenic 35.0%
!! GTTCTTGGTCTTGAAAAAAC+TGG + chr1.4:36776765-36776784 None:intergenic 35.0%
!! TAGCTTTATTGCCAATTCAC+AGG + chr1.4:36777541-36777560 None:intergenic 35.0%
!! TTGGTAAGTTGATAGTATGG+AGG + chr1.4:36776484-36776503 None:intergenic 35.0%
!!! CAGCTGAGGATATTTTAATC+AGG - chr1.4:36778425-36778444 MS.gene068213:intron 35.0%
!!! GATGTTTCCGTTGATGATTT+TGG - chr1.4:36775177-36775196 MS.gene068213:intron 35.0%
!!! TAGTACCTTTTTTGTGACAG+AGG - chr1.4:36778166-36778185 MS.gene068213:intron 35.0%
AAAACCATTATCTCCAGGGA+AGG + chr1.4:36775627-36775646 None:intergenic 40.0%
AAACACCTGAACCCACATTT+GGG + chr1.4:36777085-36777104 None:intergenic 40.0%
AAACCATTATCTCCAGGGAA+GGG + chr1.4:36775626-36775645 None:intergenic 40.0%
AACAACAAAGGGAACATCAG+GGG + chr1.4:36779138-36779157 None:intergenic 40.0%
AAGGTTACACATGCACTTCT+TGG - chr1.4:36777498-36777517 MS.gene068213:CDS 40.0%
AGATGTCAACTACACAGAAG+AGG + chr1.4:36778143-36778162 None:intergenic 40.0%
AGCTGAGAAAGAGTTAAAGG+AGG + chr1.4:36778410-36778429 None:intergenic 40.0%
AGGTTTGACACCTACAGAAT+TGG + chr1.4:36776034-36776053 None:intergenic 40.0%
ATCAGTAAGCCCATTACCAA+TGG + chr1.4:36777421-36777440 None:intergenic 40.0%
ATGAAGTGAGTGTCTTTACG+GGG - chr1.4:36775908-36775927 MS.gene068213:CDS 40.0%
ATTCCATCCTCAAGAAGGAT+AGG + chr1.4:36778892-36778911 None:intergenic 40.0%
ATTCCTATCCTTCTTGAGGA+TGG - chr1.4:36778886-36778905 MS.gene068213:intron 40.0%
CAAGGAAACCAAGCTAATGA+AGG - chr1.4:36777287-36777306 MS.gene068213:CDS 40.0%
CAGCATATCTAATGCAGCTT+TGG + chr1.4:36779720-36779739 None:intergenic 40.0%
CAGTCAACCAAATGACAACA+GGG + chr1.4:36775381-36775400 None:intergenic 40.0%
CATATAGAAGGAAGGAAGGA+AGG + chr1.4:36775274-36775293 None:intergenic 40.0%
CTCAGCTGAGAAAGAGTTAA+AGG + chr1.4:36778413-36778432 None:intergenic 40.0%
CTCTGTACACATACACATCT+AGG - chr1.4:36779228-36779247 MS.gene068213:intron 40.0%
CTTTAACTCTTTCTCAGCTG+AGG - chr1.4:36778411-36778430 MS.gene068213:intron 40.0%
GAAACCATACCATGAGGAAA+AGG + chr1.4:36779049-36779068 None:intergenic 40.0%
GAACAAATATGGTTGGGACA+AGG - chr1.4:36775483-36775502 MS.gene068213:intron 40.0%
GCTGCAAATTCATCTTCTCT+TGG - chr1.4:36775093-36775112 MS.gene068213:intron 40.0%
GCTGGAATATTGAAGAGCTA+CGG - chr1.4:36779170-36779189 MS.gene068213:intron 40.0%
GCTTTACTTACTTTGCAGCA+TGG + chr1.4:36775236-36775255 None:intergenic 40.0%
GGACACTATATTCCTGCTTT+AGG - chr1.4:36777251-36777270 MS.gene068213:CDS 40.0%
GGAGAAGATTCTTAACAAGC+GGG + chr1.4:36777963-36777982 None:intergenic 40.0%
GGCTACAAATTCTTTCTGAC+CGG + chr1.4:36779114-36779133 None:intergenic 40.0%
GGTAGTCAAGCTATTCATAG+GGG - chr1.4:36776517-36776536 MS.gene068213:intron 40.0%
GGTGTGTACAAAACAGACTT+TGG + chr1.4:36778389-36778408 None:intergenic 40.0%
GTACCTGCAAAAAGTCATAC+AGG + chr1.4:36776147-36776166 None:intergenic 40.0%
GTAGTCAAGCTATTCATAGG+GGG - chr1.4:36776518-36776537 MS.gene068213:intron 40.0%
GTCATTGAAACCATACCATG+AGG + chr1.4:36779055-36779074 None:intergenic 40.0%
GTTAAGAATCTTCTCCTGGT+TGG - chr1.4:36777967-36777986 MS.gene068213:intron 40.0%
GTTGCATTTGATGCATCCTA+CGG - chr1.4:36777632-36777651 MS.gene068213:intron 40.0%
TAAAAACAGGTCCATGATGC+GGG - chr1.4:36779671-36779690 MS.gene068213:CDS 40.0%
TAAGGCCTCTGTCACAAAAA+AGG + chr1.4:36778174-36778193 None:intergenic 40.0%
TAGCGATGACAAAAGCAGAA+AGG - chr1.4:36779410-36779429 MS.gene068213:intron 40.0%
TCAGATTCAAGAGCAAACAC+AGG + chr1.4:36776169-36776188 None:intergenic 40.0%
TGGATGAGGAATCTTGAAGT+TGG - chr1.4:36778862-36778881 MS.gene068213:intron 40.0%
TGGTATTCCTATCCTTCTTG+AGG - chr1.4:36778882-36778901 MS.gene068213:intron 40.0%
TTAATCCTTTCAGGAACCGA+TGG - chr1.4:36778020-36778039 MS.gene068213:intron 40.0%
TTATCTCAGTAGAGTCGAAC+GGG - chr1.4:36777109-36777128 MS.gene068213:intron 40.0%
TTCTGAACCAAGAATCGGTT+CGG - chr1.4:36778767-36778786 MS.gene068213:intron 40.0%
TTGCATTTGATGCATCCTAC+GGG - chr1.4:36777633-36777652 MS.gene068213:intron 40.0%
TTTATTGCCAATTCACAGGC+TGG + chr1.4:36777537-36777556 None:intergenic 40.0%
! AATCGATTCCATCCTCAAGA+AGG + chr1.4:36778897-36778916 None:intergenic 40.0%
! ATATGCTGAAGAAGTGGACT+CGG - chr1.4:36779732-36779751 MS.gene068213:CDS 40.0%
! CAGGCAAGCAATTTTTCCAT+CGG + chr1.4:36778039-36778058 None:intergenic 40.0%
! CATTAGCTTGGTTTCCTTGA+CGG + chr1.4:36777286-36777305 None:intergenic 40.0%
! GCCCTTTGATTTATAGGACT+TGG + chr1.4:36776875-36776894 None:intergenic 40.0%
! GCTTGTTAAGAATCTTCTCC+TGG - chr1.4:36777963-36777982 MS.gene068213:intron 40.0%
! GGAGATGGGCTTAATTACAA+AGG - chr1.4:36777479-36777498 MS.gene068213:CDS 40.0%
! GTGAGCATTGTAAATTGCAG+GGG + chr1.4:36778487-36778506 None:intergenic 40.0%
! GTGTGAGCATTGTAAATTGC+AGG + chr1.4:36778489-36778508 None:intergenic 40.0%
! TGACCTGTATGACTTTTTGC+AGG - chr1.4:36776141-36776160 MS.gene068213:intron 40.0%
! TTCAATGCTGCTTCGATGAT+AGG - chr1.4:36778586-36778605 MS.gene068213:CDS 40.0%
!! AAATCTCAGTTGGTGGTTCT+TGG + chr1.4:36776780-36776799 None:intergenic 40.0%
!! GAGAGACCTTAATTTGTTCC+CGG - chr1.4:36775038-36775057 MS.gene068213:CDS 40.0%
!! GATGATTTTGGTCACTATGC+TGG - chr1.4:36775189-36775208 MS.gene068213:intron 40.0%
!!! AAAAGTTGGGGGTATTTTGC+AGG + chr1.4:36779311-36779330 None:intergenic 40.0%
!!! TTTTTCCATCGGTTCCTGAA+AGG + chr1.4:36778028-36778047 None:intergenic 40.0%
AAATGTACCAGAAGCCAACC+AGG + chr1.4:36777984-36778003 None:intergenic 45.0%
AACCATTATCTCCAGGGAAG+GGG + chr1.4:36775625-36775644 None:intergenic 45.0%
AAGACGACCCTGTTGTCATT+TGG - chr1.4:36775371-36775390 MS.gene068213:intron 45.0%
ACCTGGCTGTAGTAGTGAAT+TGG - chr1.4:36775405-36775424 MS.gene068213:intron 45.0%
ACGGGTTTCATACCCAAATG+TGG - chr1.4:36777070-36777089 MS.gene068213:intron 45.0%
CAATATTTCCTCGCCAGCTA+TGG + chr1.4:36779774-36779793 None:intergenic 45.0%
CAGAAACAGAAGCGATGTTG+AGG + chr1.4:36775071-36775090 None:intergenic 45.0%
CAGCATGGGAATGTTGAATG+GGG + chr1.4:36775221-36775240 None:intergenic 45.0%
CATAGCTGGCGAGGAAATAT+TGG - chr1.4:36779772-36779791 MS.gene068213:CDS 45.0%
CCAGTCAACCAAATGACAAC+AGG + chr1.4:36775382-36775401 None:intergenic 45.0%
CCATCTCCAGAGCATAATCT+GGG + chr1.4:36777467-36777486 None:intergenic 45.0%
CGGGTTTCATACCCAAATGT+GGG - chr1.4:36777071-36777090 MS.gene068213:intron 45.0%
CTTTGAATCACGCAACCACA+AGG - chr1.4:36775348-36775367 MS.gene068213:intron 45.0%
GAAACACCTGAACCCACATT+TGG + chr1.4:36777086-36777105 None:intergenic 45.0%
GACATCTTGTTACATGCTGG+AGG - chr1.4:36778092-36778111 MS.gene068213:intron 45.0%
GATACCTTCAGGAAACTCAG+AGG + chr1.4:36779197-36779216 None:intergenic 45.0%
GATCTCATATGCAACTGGCT+TGG - chr1.4:36778940-36778959 MS.gene068213:intron 45.0%
GCAGCATGGGAATGTTGAAT+GGG + chr1.4:36775222-36775241 None:intergenic 45.0%
GTTCATGCCATGAAATGGTC+CGG - chr1.4:36779092-36779111 MS.gene068213:intron 45.0%
GTTGATCAACCAACTGGAAC+TGG - chr1.4:36776061-36776080 MS.gene068213:intron 45.0%
TACAGGCTACATTTGCACTC+AGG + chr1.4:36778058-36778077 None:intergenic 45.0%
TAGCTAAAGCCAGTTCCAGT+TGG + chr1.4:36776073-36776092 None:intergenic 45.0%
TCATACCCAAATGTGGGTTC+AGG - chr1.4:36777077-36777096 MS.gene068213:intron 45.0%
TGACGTCCGGGAACAAATTA+AGG + chr1.4:36775047-36775066 None:intergenic 45.0%
TGATCTTGGACTGAAGCTTG+AGG - chr1.4:36775002-36775021 MS.gene068213:CDS 45.0%
TGCACTTCTTGGCAAAGTGT+TGG - chr1.4:36777509-36777528 MS.gene068213:CDS 45.0%
TGCAGCATGGGAATGTTGAA+TGG + chr1.4:36775223-36775242 None:intergenic 45.0%
TGTCAACTACACAGAAGAGG+AGG + chr1.4:36778140-36778159 None:intergenic 45.0%
TTAGGATCTCGTATCCGTCA+AGG - chr1.4:36777269-36777288 MS.gene068213:CDS 45.0%
TTTCTGACCGGACCATTTCA+TGG + chr1.4:36779102-36779121 None:intergenic 45.0%
! AACTGAAGAGTGGCTTGTAG+AGG - chr1.4:36776294-36776313 MS.gene068213:intron 45.0%
! AGGATGACTTGTCTCTTACG+TGG - chr1.4:36775461-36775480 MS.gene068213:intron 45.0%
! CCTGTTGTCATTTGGTTGAC+TGG - chr1.4:36775379-36775398 MS.gene068213:intron 45.0%
! CTATGTTGGTTGACTGGATG+AGG - chr1.4:36778848-36778867 MS.gene068213:intron 45.0%
! GATGGGTTCATGCCATGAAA+TGG - chr1.4:36779087-36779106 MS.gene068213:intron 45.0%
! GTTGTCATTTGGTTGACTGG+AGG - chr1.4:36775382-36775401 MS.gene068213:intron 45.0%
! GTTGTTAATGGGTCAGAAGC+TGG - chr1.4:36779152-36779171 MS.gene068213:intron 45.0%
! TAGGGAAGGAAAATAGTGGG+TGG + chr1.4:36776263-36776282 None:intergenic 45.0%
! TATGCTGAAGAAGTGGACTC+GGG - chr1.4:36779733-36779752 MS.gene068213:CDS 45.0%
! TCTGAACCAAGAATCGGTTC+GGG - chr1.4:36778768-36778787 MS.gene068213:intron 45.0%
! TGGACCTTTTCCTCATGGTA+TGG - chr1.4:36779042-36779061 MS.gene068213:intron 45.0%
! TTCTTAACAAGCGGGAGCAT+TGG + chr1.4:36777955-36777974 None:intergenic 45.0%
!! AATCGGTTCGGGATTCACTA+GGG - chr1.4:36778779-36778798 MS.gene068213:intron 45.0%
!! AGGGATCAATTTGCTACTCG+AGG + chr1.4:36776326-36776345 None:intergenic 45.0%
!! AGGGATTGGCCATTGGTAAT+GGG - chr1.4:36777409-36777428 MS.gene068213:intron 45.0%
!! CCAGATTATGCTCTGGAGAT+GGG - chr1.4:36777465-36777484 MS.gene068213:CDS 45.0%
!! TATCTAATGCAGCTTTGGGC+TGG + chr1.4:36779715-36779734 None:intergenic 45.0%
!! TCTTTAGCGACTAGCTCTGA+GGG - chr1.4:36775812-36775831 MS.gene068213:CDS 45.0%
!! TTTGAACAGGGATTGGCCAT+TGG - chr1.4:36777402-36777421 MS.gene068213:intron 45.0%
!!! TAAATTTTCAAATAATTAAA+AGG - chr1.4:36776601-36776620 MS.gene068213:intron 5.0%
AACAAAGGGAACATCAGGGG+AGG + chr1.4:36779135-36779154 None:intergenic 50.0%
AATCGAAAGGGGGGATGTTC+AGG - chr1.4:36775561-36775580 MS.gene068213:CDS 50.0%
ACCCTTGCTGAATCCATAGC+TGG - chr1.4:36779758-36779777 MS.gene068213:CDS 50.0%
AGCCTACCCAGATTATGCTC+TGG - chr1.4:36777458-36777477 MS.gene068213:CDS 50.0%
ATTATCTCCAGGGAAGGGGA+AGG + chr1.4:36775621-36775640 None:intergenic 50.0%
ATTTGGTTGACTGGAGGACC+TGG - chr1.4:36775388-36775407 MS.gene068213:intron 50.0%
CACCACTGTGAGCACTAACA+TGG + chr1.4:36775784-36775803 None:intergenic 50.0%
CCCATCTCCAGAGCATAATC+TGG + chr1.4:36777468-36777487 None:intergenic 50.0%
CGGATACGAGATCCTAAAGC+AGG + chr1.4:36777266-36777285 None:intergenic 50.0%
CTCCAGAGCATAATCTGGGT+AGG + chr1.4:36777463-36777482 None:intergenic 50.0%
CTTCAGTCCAAGATCAACGC+TGG + chr1.4:36774998-36775017 None:intergenic 50.0%
GCCAATTCACTACTACAGCC+AGG + chr1.4:36775409-36775428 None:intergenic 50.0%
GCCAGCTATGGATTCAGCAA+GGG + chr1.4:36779762-36779781 None:intergenic 50.0%
TAAATCCCACTGGGCCTAGA+GGG - chr1.4:36776428-36776447 MS.gene068213:intron 50.0%
TGCCATGTTAGTGCTCACAG+TGG - chr1.4:36775779-36775798 MS.gene068213:intron 50.0%
TTAAATCCCACTGGGCCTAG+AGG - chr1.4:36776427-36776446 MS.gene068213:intron 50.0%
TTCCCCTTCCCTGGAGATAA+TGG - chr1.4:36775620-36775639 MS.gene068213:CDS 50.0%
TTGGGGATGCTCTGCAAAGA+AGG + chr1.4:36777189-36777208 None:intergenic 50.0%
! ATGCTGAAGAAGTGGACTCG+GGG - chr1.4:36779734-36779753 MS.gene068213:CDS 50.0%
! GACGATGGACCTTTTCCTCA+TGG - chr1.4:36779037-36779056 MS.gene068213:intron 50.0%
! GTGAATCCCGAACCGATTCT+TGG + chr1.4:36778777-36778796 None:intergenic 50.0%
! GTTGGTTCCAGCCTGTGAAT+TGG - chr1.4:36777527-36777546 MS.gene068213:CDS 50.0%
!! AATTGCAGGGGTACCGAGAT+CGG + chr1.4:36778475-36778494 None:intergenic 50.0%
!! ATCGGTTCGGGATTCACTAG+GGG - chr1.4:36778780-36778799 MS.gene068213:intron 50.0%
!! ATCTTCTCCTGGTTGGCTTC+TGG - chr1.4:36777974-36777993 MS.gene068213:intron 50.0%
!! CAGGGATTGGCCATTGGTAA+TGG - chr1.4:36777408-36777427 MS.gene068213:intron 50.0%
!! CCCAGATTATGCTCTGGAGA+TGG - chr1.4:36777464-36777483 MS.gene068213:CDS 50.0%
!! GAATCGGTTCGGGATTCACT+AGG - chr1.4:36778778-36778797 MS.gene068213:intron 50.0%
!! GTCTTTAGCGACTAGCTCTG+AGG - chr1.4:36775811-36775830 MS.gene068213:CDS 50.0%
AACAATCCCTCTAGGCCCAG+TGG + chr1.4:36776437-36776456 None:intergenic 55.0%
ACAATCCCTCTAGGCCCAGT+GGG + chr1.4:36776436-36776455 None:intergenic 55.0%
CAACAGGGTCGTCTTCCTTG+TGG + chr1.4:36775366-36775385 None:intergenic 55.0%
CAGTCCAAGATCAACGCTGG+TGG + chr1.4:36774995-36775014 None:intergenic 55.0%
CGATGTTGAGGTTGACGTCC+GGG + chr1.4:36775059-36775078 None:intergenic 55.0%
CGCCAGCTATGGATTCAGCA+AGG + chr1.4:36779763-36779782 None:intergenic 55.0%
CGGTCCTCTGAGTTTCCTGA+AGG - chr1.4:36779190-36779209 MS.gene068213:intron 55.0%
GAACCATGTGACCCGCATCA+TGG + chr1.4:36779685-36779704 None:intergenic 55.0%
GAAGCGCGTCAAAGAGCTAG+TGG + chr1.4:36775876-36775895 None:intergenic 55.0%
GCGATGTTGAGGTTGACGTC+CGG + chr1.4:36775060-36775079 None:intergenic 55.0%
GCTCTGCAAAGAAGGCCTGA+GGG + chr1.4:36777181-36777200 None:intergenic 55.0%
GTTCGGGATTCACTAGGGGT+TGG - chr1.4:36778784-36778803 MS.gene068213:intron 55.0%
TGCGGGTCACATGGTTCCAA+TGG - chr1.4:36779688-36779707 MS.gene068213:CDS 55.0%
TGCTCTGCAAAGAAGGCCTG+AGG + chr1.4:36777182-36777201 None:intergenic 55.0%
TGCTGAATCCATAGCTGGCG+AGG - chr1.4:36779763-36779782 MS.gene068213:CDS 55.0%
!! TCTGCCACCAGCGTTGATCT+TGG - chr1.4:36774988-36775007 MS.gene068213:CDS 55.0%
GACATGACCTTCCCCTTCCC+TGG - chr1.4:36775611-36775630 MS.gene068213:CDS 60.0%
GGTCCATGATGCGGGTCACA+TGG - chr1.4:36779679-36779698 MS.gene068213:CDS 60.0%
!! GCAGCTTTGGGCTGGTCCAT+TGG + chr1.4:36779707-36779726 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 36774940 36779808 36774940 ID=MS.gene068213
chr1.4 mRNA 36774940 36779808 36774940 ID=MS.gene068213.t1;Parent=MS.gene068213
chr1.4 exon 36779504 36779808 36779504 ID=MS.gene068213.t1.exon1;Parent=MS.gene068213.t1
chr1.4 CDS 36779504 36779808 36779504 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36779244 36779415 36779244 ID=MS.gene068213.t1.exon2;Parent=MS.gene068213.t1
chr1.4 CDS 36779244 36779415 36779244 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36778586 36778705 36778586 ID=MS.gene068213.t1.exon3;Parent=MS.gene068213.t1
chr1.4 CDS 36778586 36778705 36778586 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36777420 36777563 36777420 ID=MS.gene068213.t1.exon4;Parent=MS.gene068213.t1
chr1.4 CDS 36777420 36777563 36777420 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36777184 36777337 36777184 ID=MS.gene068213.t1.exon5;Parent=MS.gene068213.t1
chr1.4 CDS 36777184 36777337 36777184 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36776627 36776715 36776627 ID=MS.gene068213.t1.exon6;Parent=MS.gene068213.t1
chr1.4 CDS 36776627 36776715 36776627 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36775787 36776045 36775787 ID=MS.gene068213.t1.exon7;Parent=MS.gene068213.t1
chr1.4 CDS 36775787 36776045 36775787 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36775537 36775670 36775537 ID=MS.gene068213.t1.exon8;Parent=MS.gene068213.t1
chr1.4 CDS 36775537 36775670 36775537 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
chr1.4 exon 36774940 36775068 36774940 ID=MS.gene068213.t1.exon9;Parent=MS.gene068213.t1
chr1.4 CDS 36774940 36775068 36774940 ID=cds.MS.gene068213.t1;Parent=MS.gene068213.t1
Gene Sequence

>MS.gene068213

ATGGGGTCAATCTTGTTCATTTTGTTCTGCTTGTGGATATCAATTTGTTCTGCCACCAGCGTTGATCTTGGACTGAAGCTTGAGGCTAAGAAGCTTGTGAGAGACCTTAATTTGTTCCCGGACGTCAACCTCAACATCGCTTCTGTTTCTGCTGCTGCAAATTCATCTTCTCTTGGAAAGATCGTTGAGAAGCCCCTCAAGTTTCGTAACCTAATTTCCGATGATGATGATGATGATGATGTTTCCGTTGATGATTTTGGTCACTATGCTGGCTATTACCCCATTCAACATTCCCATGCTGCAAAGTAAGTAAAGCTTTTCACTTTAACTTCCTTCCTTCCTTCCTTCTATATGATTCTCTTTCCTTTTATGAAATATATGTGTTGTTTGTAGGATGTTCTACTTTTTCTTTGAATCACGCAACCACAAGGAAGACGACCCTGTTGTCATTTGGTTGACTGGAGGACCTGGCTGTAGTAGTGAATTGGCTTTGTTTTACGAAAATGGCCCTTTCAAGATTAAGGATGACTTGTCTCTTACGTGGAACAAATATGGTTGGGACAAGGTAACCTAATTTCACATTTTTCTCTTTTATTAGTTAAATGATTATGTTTTGAGTAAAATCGAAAGGGGGGATGTTCAGGTAATGAGCAAGTTTATACTATTATGTGGACATGACCTTCCCCTTCCCTGGAGATAATGGTTTTAAAACATTTAAACTGATTTATTGCTCATTGCTTGTTATCATAATGAATCTTTATAAAGTAATGTTAATAAGAAACAATTTAATCAGTAATCACTCATTTAAACTTTATCAAGTTTCTTGTTGAACTCATTGCTGCCATGTTAGTGCTCACAGTGGTGTCTCTTTGTCTTTAGCGACTAGCTCTGAGGGTTTTCTTTCTGTATAGTACTAACATGTAATTTGAGCTACCACTAGCTCTTTGACGCGCTTCACATCTTCCTTAATGAAGTGAGTGTCTTTACGGGGAGAGAAATATAATTGATATCATGTTTGTTATAACCTTGACAATTGCTTTCTGTATTGTACATTTCCTTTGATAATTATTTATGACAGTTAAAATTTGTTGCCAATTCTGTAGGTGTCAAACCTTTTGTATGTTGATCAACCAACTGGAACTGGCTTTAGCTACAGTACTGATTTGCGTGATATTCGTCATAATGAAAAGGGTGTTAGCAATGACCTGTATGACTTTTTGCAGGTACCTGTGTTTGCTCTTGAATCTGAATGTAAAATTCAAGAATCTTAGTGCAATTCTAAAGAGGGTGTTTTCTCTATTTTCATTATGTTTAGATGATCCACCCACTATTTTCCTTCCCTAATTCTACTTATAACTGAAGAGTGGCTTGTAGAGGAATTTTCCTCGAGTAGCAAATTGATCCCTATTTAAATTCCTTTTATATTTTGACAAAACTAAATACAGTGTTTTAATTTGGTAAAGGAGATTAGTAGATGCTACTCAAGTTTAAATCCCACTGGGCCTAGAGGGATTGTTTCTAACTTTTGAAATGGGGTCTTACCTCCATACTATCAACTTACCAATGTTGGTAATTTTGGTAGTCAAGCTATTCATAGGGGGATTTAGTTGACAATCAAATCATTATCCAAAAAATTTCATTTTTAGATTTGAAGTCAACTTTAAATTTTCAAATAATTAAAAGGAATCATAATTTTCAATGAGTAAGGAGCTTGTTTTCTTATTTTTGTCCATTCACTAATTCAATTTCTTAATAGGGAAATAATCCATATTTGAAAAAGAATAAGACTCCGAGTTCAGAAACAATACTTGCTAAAAGCAAACCAGTTTTTTCAAGACCAAGAACCACCAACTGAGATTTTAAAGTGGACATAAACAACCTTTACTCATATTGAGATATCTAGAATTGTAGATTTCTTTCACATTAAAAATTCCAAGTCCTATAAATCAAAGGGCATCCATACTCTCTTTCACATAGATTTACGAATCTCTGATCTTCTGAAGAATCTTAGCATCTGTAATCCATATGAGACCTGTTCGAATTTGCAGAAAACTGGCACTAAGTCATCATGATTCACACAAACACAAATTAAAAAAGTTGTTATTGTTACAAATTTAGAGTAAAAAAATTACGGGTTTCATACCCAAATGTGGGTTCAGGTGTTTCATTTTATCTCAGTAGAGTCGAACGGGTAAAAAAGACTACAATAGCATAACAGTTTCTTTTTTTTAATTTTTTCCCTCAGGCCTTCTTTGCAGAGCATCCCCAATATGCAAAGAATGACTTTTTTATTACAGGTGAATCATATGCTGGACACTATATTCCTGCTTTAGGATCTCGTATCCGTCAAGGAAACCAAGCTAATGAAGGAATTCATATAAATTTGAAGGTTCATTCTGTTACATCATATAATGAAACATTCTGATTTTATATAGGAAACCAGTGTATCTTATTTTTAATGGTTTGAACAGGGATTGGCCATTGGTAATGGGCTTACTGATCCTGCAATTCAGTATAAAGCCTACCCAGATTATGCTCTGGAGATGGGCTTAATTACAAAGGTTACACATGCACTTCTTGGCAAAGTGTTGGTTCCAGCCTGTGAATTGGCAATAAAGCTATGCGGTAATTTACACTTGTATTTCTTGTATTTCTTGACACTTGTATTTCCAATGATCATGTAAACTTTAAGGTTGCATTTGATGCATCCTACGGGATTTTACAAACAGAACCGCAAGGGATATAAAATTGAATCATAAAACTACTGTTGGTTCCTCTTCTTGTTTGTCGATTAGTGAACAATAAATTTTAGAATTCTATTTGATGCTTCATCTTTAGTTTTGTTTTGTTTAAAACCAAGCTTTGAACAAAATTCATTTTGTTCTATCCTTCATTTTTAAACAAATCTAATGTGCCCTAAATATTTTCTTATCATTTCACCAGAAGTAAATTGTCAAGAATCACTGCCTGTTTTTCTTTTTTCTTTTGACCAAACCTGTTTCTCTTCTAAAACCAATGCTCCCGCTTGTTAAGAATCTTCTCCTGGTTGGCTTCTGGTACATTTACCTTTAATATTTGTTTTAATCCTTTCAGGAACCGATGGAAAAATTGCTTGCCTGAGTGCAAATGTAGCCTGTAATCTCATTTTCAATGACATCTTGTTACATGCTGGAGGTGTAAATGTGAGCAAACAATTTCCTCCTCTTCTGTGTAGTTGACATCTCATTAGTACCTTTTTTGTGACAGAGGCCTTACATGAAAGCTCATTGAGAATGAGGCATAGTTAAAGATATACAGTTCAAGCAATCTATTTGGAAAAAGAGATGCTAAAATACTGTATACCATGGAGAGTTCTAATTAATCAGTTTATCAGGATTTGGAACAGTTTAATTGATATGCACTCCCAACACTAAGTACTCATTCTTATAATCGATCATTTTCCAAACCCAAAGTCTGTTTTGTACACACCTCCTTTAACTCTTTCTCAGCTGAGGATATTTTAATCAGGAGTTTTTTTTTTATTCAATAGGAACCGATCTCGGTACCCCTGCAATTTACAATGCTCACACACACTGTGCATCAACTACTTGCGCTAAACCACAATAGTTTTTAATTAAGAGGTTTTATGGCAAATGTTTAGAATGTCTTCAATGCTGCTTCGATGATAGGTCTGAAGAAACACATATTTATTGAAATTGCAATCTTGAAGCAATATATGGGTGTTTTCATAATTTTTACTAGTTGTTATATACTTTTGTTGCAGTACTATGATATCAGAAAGAAGTGTGAGGGGAGTCTCTGCTATGATTTTTCAAACATGGAAAAGTTTCTGAACCAAGAATCGGTTCGGGATTCACTAGGGGTTGGCAAAATTCGTTTTGTTTCTTGTAGCACTGAAGTTTATATTGCTATGTTGGTTGACTGGATGAGGAATCTTGAAGTTGGTATTCCTATCCTTCTTGAGGATGGAATCGATTTACTCATTTATGCTGGGGAATATGATCTCATATGCAACTGGCTTGGTAAGTATTAACACTAGATATATTTAAGATTTGTTGAGAAGTTTAATATTTCATATTATAATCTTTGAATAATGAGACGATGGACCTTTTCCTCATGGTATGGTTTCAATGACTAGGTAATTCAAGATGGGTTCATGCCATGAAATGGTCCGGTCAGAAAGAATTTGTAGCCTCCCCTGATGTTCCCTTTGTTGTTAATGGGTCAGAAGCTGGAATATTGAAGAGCTACGGTCCTCTGAGTTTCCTGAAGGTATCTATCTTTCTCTCTCTGTACACATACACATCTAGGCACATGCTTATGTAGAGAAAGTGAAAACTATAGATTATTTACTTCAGCATTACGCTACCTGCAAAATACCCCCAACTTTTAATCAGCACTTGTAACAGGACTCACCATTCAATAGTGCTGATTAAATTCACCCCAATTTCAACATTGCATCCAAATCATTAGCGATGACAAAAGCAGAAAGGATTATAAATGTTTTTTCTGTTAAAGCCAGAATGTTAAAATTGGGAGTGACTCACACTACTGAATGCTTATATTGTGCGGGAGATAAATTACTTACTGTATTGCCATGATCAAATATAAACTTGCTTTTTCTGTAGTACAATGACATGGAATGTTGTCCAGAAAGACACTTCATATATCTACCCAAATCATTTATTGTTTTGCTCATGCTCACTGAAAAATATTTTATTTACTGTGTAATAAAAACAGGTCCATGATGCGGGTCACATGGTTCCAATGGACCAGCCCAAAGCTGCATTAGATATGCTGAAGAAGTGGACTCGGGGAACCCTTGCTGAATCCATAGCTGGCGAGGAAATATTGGTTGCTGACATGTGA
Protein sequence

>MS.gene068213.t1

MGSILFILFCLWISICSATSVDLGLKLEAKKLVRDLNLFPDVNLNIASVSAAANSSSLGKIVEKPLKFRNLISDDDDDDDVSVDDFGHYAGYYPIQHSHAAKMFYFFFESRNHKEDDPVVIWLTGGPGCSSELALFYENGPFKIKDDLSLTWNKYGWDKVSNLLYVDQPTGTGFSYSTDLRDIRHNEKGVSNDLYDFLQAFFAEHPQYAKNDFFITGESYAGHYIPALGSRIRQGNQANEGIHINLKGLAIGNGLTDPAIQYKAYPDYALEMGLITKVTHALLGKVLVPACELAIKLCGTDGKIACLSANVACNLIFNDILLHAGGVNYYDIRKKCEGSLCYDFSNMEKFLNQESVRDSLGVGKIRFVSCSTEVYIAMLVDWMRNLEVGIPILLEDGIDLLIYAGEYDLICNWLGNSRWVHAMKWSGQKEFVASPDVPFVVNGSEAGILKSYGPLSFLKVHDAGHMVPMDQPKAALDMLKKWTRGTLAESIAGEEILVADM