AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029371

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029371.t1 MTR_1g111350 96.035 454 17 1 12 465 15 467 0.0 843
MS.gene029371.t1 MTR_6g085010 55.602 482 188 7 5 465 15 491 1.10e-166 479
MS.gene029371.t1 MTR_7g117430 56.341 410 167 6 67 465 76 484 3.84e-142 416
MS.gene029371.t1 MTR_1g115210 44.492 463 240 6 18 465 26 486 4.83e-138 405
MS.gene029371.t1 MTR_1g039270 46.548 449 215 6 31 465 32 469 1.13e-127 379
MS.gene029371.t1 MTR_8g103880 42.529 435 220 6 28 458 40 448 8.19e-113 340
MS.gene029371.t1 MTR_3g097150 40.235 425 230 11 62 465 25 446 3.32e-87 274
MS.gene029371.t1 MTR_3g046300 38.520 392 201 10 106 465 75 458 2.25e-74 241
MS.gene029371.t1 MTR_5g091130 38.583 381 202 9 114 465 176 553 1.64e-73 241
MS.gene029371.t1 MTR_4g007740 34.071 452 253 11 50 465 35 477 2.10e-68 226
MS.gene029371.t1 MTR_3g053710 36.275 408 220 12 78 465 79 466 1.10e-67 224
MS.gene029371.t1 MTR_2g028190 33.114 456 266 14 41 465 4 451 7.70e-65 216
MS.gene029371.t1 MTR_5g080890 36.620 355 200 12 128 465 85 431 4.62e-61 206
MS.gene029371.t1 MTR_5g080960 36.901 355 199 12 128 465 85 431 2.22e-60 204
MS.gene029371.t1 MTR_3g053980 35.644 404 223 10 92 465 89 485 3.45e-60 204
MS.gene029371.t1 MTR_5g044770 35.775 355 200 13 128 465 85 428 1.94e-59 201
MS.gene029371.t1 MTR_8g096990 31.579 418 245 14 80 465 21 429 3.05e-58 198
MS.gene029371.t1 MTR_8g038280 34.626 361 201 14 128 465 85 433 1.19e-57 196
MS.gene029371.t1 MTR_5g008110 36.592 358 197 13 128 465 66 413 2.18e-55 190
MS.gene029371.t1 MTR_0036s0110 32.701 422 223 19 74 465 50 440 3.10e-55 190
MS.gene029371.t1 MTR_0036s0070 33.333 411 237 15 72 465 34 424 9.48e-55 189
MS.gene029371.t1 MTR_5g008150 35.854 357 202 11 128 465 62 410 1.41e-53 185
MS.gene029371.t1 MTR_5g038360 32.678 407 249 13 78 465 34 434 7.56e-53 184
MS.gene029371.t1 MTR_2g059490 35.376 359 202 14 129 465 58 408 4.02e-52 182
MS.gene029371.t1 MTR_2g059460 34.831 356 203 12 129 465 59 404 1.00e-51 180
MS.gene029371.t1 MTR_2g055840 33.240 358 211 9 134 465 18 373 8.60e-51 177
MS.gene029371.t1 MTR_5g008070 35.593 354 205 10 127 465 79 424 1.15e-50 178
MS.gene029371.t1 MTR_3g028120 30.193 414 260 12 72 465 32 436 1.34e-50 178
MS.gene029371.t1 MTR_8g038250 33.803 355 192 12 128 465 85 413 1.38e-49 174
MS.gene029371.t1 MTR_0036s0050 32.553 427 228 17 72 465 34 433 2.51e-47 169
MS.gene029371.t1 MTR_5g044570 34.174 357 186 15 125 465 86 409 2.05e-46 166
MS.gene029371.t1 MTR_0024s0040 32.258 372 229 11 110 465 44 408 2.49e-46 166
MS.gene029371.t1 MTR_8g038310 29.440 411 249 13 68 465 29 411 4.45e-46 165
MS.gene029371.t1 MTR_6g090290 34.174 357 209 11 128 465 85 434 2.91e-45 164
MS.gene029371.t1 MTR_2g067830 29.851 402 231 16 92 465 26 404 8.21e-44 159
MS.gene029371.t1 MTR_3g014290 33.333 363 213 9 118 465 68 416 4.14e-43 157
MS.gene029371.t1 MTR_1g037630 33.609 363 212 9 118 465 80 428 4.82e-43 157
MS.gene029371.t1 MTR_8g039540 33.238 349 214 10 127 465 94 433 2.06e-42 155
MS.gene029371.t1 MTR_4g109760 33.711 353 205 13 130 465 56 396 1.59e-40 150
MS.gene029371.t1 MTR_7g105850 30.077 389 217 13 124 465 85 465 3.18e-38 145
MS.gene029371.t1 MTR_3g100500 32.152 395 243 10 84 465 55 437 4.02e-38 144
MS.gene029371.t1 MTR_2g070430 28.864 440 264 14 65 464 22 452 4.26e-38 144
MS.gene029371.t1 MTR_5g077850 31.268 355 214 12 136 465 88 437 2.21e-37 142
MS.gene029371.t1 MTR_2g105300 30.588 340 197 15 148 462 54 379 3.27e-37 140
MS.gene029371.t1 MTR_1g060750 28.713 404 225 18 88 465 8 374 4.22e-37 140
MS.gene029371.t1 MTR_2g063110 26.697 442 252 16 92 465 71 508 1.05e-36 141
MS.gene029371.t1 MTR_3g068000 31.551 374 204 15 134 465 78 441 1.15e-36 140
MS.gene029371.t1 MTR_4g045857 34.800 250 137 9 110 339 43 286 1.04e-35 134
MS.gene029371.t1 MTR_6g088760 28.392 398 226 16 80 432 21 404 2.22e-35 138
MS.gene029371.t1 MTR_3g065160 30.748 361 208 14 134 465 79 426 3.80e-35 135
MS.gene029371.t1 MTR_5g012490 29.082 392 206 14 139 465 85 469 2.30e-34 134
MS.gene029371.t1 MTR_4g100990 28.640 419 220 16 114 465 64 470 6.05e-34 133
MS.gene029371.t1 MTR_7g062360 30.978 368 212 14 134 465 64 425 1.22e-32 129
MS.gene029371.t1 MTR_4g056420 28.495 372 223 14 127 465 75 436 5.74e-31 125
MS.gene029371.t1 MTR_5g077920 29.949 394 242 12 101 465 38 426 4.19e-30 122
MS.gene029371.t1 MTR_7g102750 26.761 426 269 13 70 465 28 440 1.82e-29 120
MS.gene029371.t1 MTR_5g008090 33.553 304 169 13 184 465 20 312 8.40e-29 115
MS.gene029371.t1 MTR_2g084550 28.763 372 221 14 128 465 76 437 3.56e-27 114
MS.gene029371.t1 MTR_7g080230 27.676 383 224 17 121 465 63 430 3.59e-26 111
MS.gene029371.t1 MTR_1g078240 25.858 379 238 13 121 465 61 430 9.10e-26 110
MS.gene029371.t1 MTR_7g102750 25.935 401 254 12 70 440 28 415 1.04e-25 109
MS.gene029371.t1 MTR_5g016260 27.451 357 230 11 127 465 86 431 1.70e-25 110
MS.gene029371.t1 MTR_4g095270 28.889 360 221 14 127 465 78 423 1.86e-25 110
MS.gene029371.t1 MTR_4g095270 28.889 360 221 14 127 465 78 423 2.24e-25 109
MS.gene029371.t1 MTR_5g016260 27.451 357 230 11 127 465 86 431 2.31e-25 109
MS.gene029371.t1 MTR_1g061940 26.613 372 234 12 126 465 80 444 2.62e-25 108
MS.gene029371.t1 MTR_1g078240 25.858 379 237 14 121 465 61 429 1.28e-24 106
MS.gene029371.t1 MTR_8g075090 28.184 369 210 17 130 465 113 459 9.03e-24 104
MS.gene029371.t1 MTR_8g075090 28.184 369 210 17 130 465 113 459 1.10e-23 103
MS.gene029371.t1 MTR_8g075010 26.486 370 217 12 130 465 101 449 1.67e-23 103
MS.gene029371.t1 MTR_5g022880 27.056 377 206 19 130 465 113 461 5.89e-22 99.0
MS.gene029371.t1 MTR_7g021510 24.611 386 234 14 121 465 64 433 1.70e-21 97.4
MS.gene029371.t1 MTR_6g084710 26.579 380 234 17 120 465 182 550 1.70e-21 97.8
MS.gene029371.t1 MTR_1g078240 27.469 324 198 12 121 416 61 375 3.25e-21 95.5
MS.gene029371.t1 MTR_4g023650 27.532 385 223 18 120 465 52 419 1.83e-20 93.6
MS.gene029371.t1 MTR_8g094590 25.263 380 231 16 120 465 64 424 2.48e-20 93.6
MS.gene029371.t1 MTR_8g075090 29.293 297 161 14 130 396 113 390 2.69e-20 93.6
MS.gene029371.t1 MTR_1g072450 25.061 411 230 20 108 461 26 415 4.27e-19 89.7
MS.gene029371.t1 MTR_6g084710 29.183 257 154 11 120 358 182 428 4.73e-19 90.1
MS.gene029371.t1 MTR_1g029810 27.371 369 222 17 128 465 56 409 5.90e-19 89.0
MS.gene029371.t1 MTR_3g087780 28.267 375 206 17 130 465 100 450 6.93e-19 89.7
MS.gene029371.t1 MTR_1g029810 27.371 369 222 16 128 465 56 409 1.20e-18 88.6
MS.gene029371.t1 MTR_5g061690 27.624 362 222 14 130 465 102 449 1.72e-18 88.6
MS.gene029371.t1 MTR_2g022450 23.136 389 232 12 126 461 37 411 1.85e-18 87.8
MS.gene029371.t1 MTR_1g093100 23.741 417 243 14 102 460 18 417 1.36e-17 85.1
MS.gene029371.t1 MTR_1g072380 23.150 419 239 16 106 461 34 432 1.60e-17 85.1
MS.gene029371.t1 MTR_2g022320 24.611 386 220 13 130 461 37 405 1.49e-16 82.0
MS.gene029371.t1 MTR_4g023630 25.393 382 235 17 120 465 52 419 1.58e-16 82.0
MS.gene029371.t1 MTR_1g072420 24.697 413 230 18 108 461 26 416 2.30e-16 81.3
MS.gene029371.t1 MTR_8g094590 25.000 340 206 14 120 429 64 384 4.31e-16 80.5
MS.gene029371.t1 MTR_8g094590 26.641 259 156 9 120 361 64 305 9.83e-16 78.2
MS.gene029371.t1 MTR_5g080330 27.035 344 206 14 145 465 1 322 7.26e-15 76.6
MS.gene029371.t1 MTR_2g022380 25.000 380 210 15 138 461 49 409 9.23e-15 76.6
MS.gene029371.t1 MTR_2g022430 24.297 391 217 16 130 461 40 410 3.73e-14 74.7
MS.gene029371.t1 MTR_2g022370 23.896 385 221 15 130 461 40 405 1.78e-13 72.4
MS.gene029371.t1 MTR_3g087780 27.469 324 181 14 172 465 9 308 2.80e-13 71.6
MS.gene029371.t1 MTR_7g080230 26.524 328 193 16 171 465 48 360 4.77e-13 70.9
MS.gene029371.t1 MTR_3g087780 27.044 318 190 12 172 465 45 344 6.63e-13 70.9
MS.gene029371.t1 MTR_2g022480 23.873 377 217 17 130 452 50 410 3.98e-12 68.2
MS.gene029371.t1 MTR_3g006820 22.249 418 258 17 86 465 24 412 2.62e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029371.t1 AT1G25510 61.966 468 151 5 19 465 22 483 0.0 575
MS.gene029371.t1 AT3G18490 54.582 491 195 6 3 465 10 500 1.50e-177 507
MS.gene029371.t1 AT1G01300 55.072 414 169 7 68 465 72 484 8.62e-137 402
MS.gene029371.t1 AT3G61820 54.386 399 157 9 91 465 86 483 4.55e-128 380
MS.gene029371.t1 AT3G20015 47.837 416 205 3 62 465 55 470 1.81e-121 363
MS.gene029371.t1 AT5G10770 37.560 418 221 11 81 465 63 473 1.48e-78 252
MS.gene029371.t1 AT2G03200 38.251 366 204 10 119 465 96 458 5.72e-73 238
MS.gene029371.t1 AT3G59080 35.142 424 240 11 72 465 114 532 1.55e-69 231
MS.gene029371.t1 AT5G10760 39.216 408 225 11 70 465 68 464 1.88e-69 228
MS.gene029371.t1 AT2G42980 33.846 455 258 13 48 465 76 524 3.18e-67 224
MS.gene029371.t1 AT3G59080 33.732 418 218 10 72 465 114 496 1.84e-60 206
MS.gene029371.t1 AT3G25700 32.019 431 248 13 76 465 23 449 9.45e-58 197
MS.gene029371.t1 AT5G33340 36.816 402 224 16 85 465 42 434 2.07e-56 193
MS.gene029371.t1 AT1G79720 31.929 451 251 13 58 465 45 482 4.48e-56 194
MS.gene029371.t1 AT1G64830 35.775 355 201 12 128 465 84 428 2.63e-55 190
MS.gene029371.t1 AT3G54400 35.519 366 212 12 113 465 70 424 1.38e-54 188
MS.gene029371.t1 AT1G09750 32.337 368 228 11 113 465 87 448 2.70e-46 167
MS.gene029371.t1 AT1G31450 32.719 434 232 19 79 465 21 441 1.28e-45 165
MS.gene029371.t1 AT2G35615 31.724 435 244 16 77 465 16 443 3.70e-45 164
MS.gene029371.t1 AT2G28040 32.000 350 202 9 129 465 55 381 3.45e-43 157
MS.gene029371.t1 AT2G28040 31.933 357 193 11 129 465 64 390 3.58e-43 157
MS.gene029371.t1 AT2G28010 29.759 373 216 10 111 465 47 391 7.73e-43 156
MS.gene029371.t1 AT5G07030 28.293 410 248 12 79 465 68 454 2.27e-41 153
MS.gene029371.t1 AT2G28220 30.114 352 209 10 130 465 67 397 2.99e-39 146
MS.gene029371.t1 AT2G28225 30.704 355 203 11 130 465 67 397 5.27e-39 145
MS.gene029371.t1 AT2G28030 30.000 360 195 12 130 465 61 387 1.37e-38 144
MS.gene029371.t1 AT3G12700 28.825 451 275 16 52 465 19 460 3.52e-38 145
MS.gene029371.t1 AT3G52500 27.922 462 267 16 50 465 26 467 5.12e-38 144
MS.gene029371.t1 AT4G30030 30.398 352 219 13 130 465 78 419 7.66e-38 143
MS.gene029371.t1 AT3G02740 27.211 441 264 15 57 465 24 439 2.30e-37 143
MS.gene029371.t1 AT3G02740 29.348 368 215 14 130 465 10 364 8.68e-37 140
MS.gene029371.t1 AT5G37540 32.123 358 210 13 136 465 86 438 6.95e-35 135
MS.gene029371.t1 AT5G36260 27.371 369 226 12 128 465 76 433 9.58e-35 135
MS.gene029371.t1 AT4G30040 30.966 352 213 13 130 460 85 427 3.45e-34 133
MS.gene029371.t1 AT2G23945 26.824 425 248 18 66 453 38 436 4.23e-34 133
MS.gene029371.t1 AT2G39710 29.268 369 213 13 134 463 69 428 5.53e-34 133
MS.gene029371.t1 AT5G02190 30.541 370 205 16 139 465 82 442 2.87e-31 125
MS.gene029371.t1 AT1G66180 30.110 362 212 14 134 465 76 426 3.67e-31 124
MS.gene029371.t1 AT5G43100 27.577 359 226 12 127 465 73 417 4.97e-31 126
MS.gene029371.t1 AT5G43100 27.577 359 226 12 127 465 73 417 6.97e-31 124
MS.gene029371.t1 AT2G36670 27.202 386 244 13 109 465 85 462 8.83e-30 122
MS.gene029371.t1 AT2G36670 27.520 367 230 12 128 465 98 457 1.10e-29 121
MS.gene029371.t1 AT2G36670 27.397 365 229 12 130 465 34 391 2.00e-29 120
MS.gene029371.t1 AT2G36670 27.397 365 229 12 130 465 34 391 2.00e-29 120
MS.gene029371.t1 AT1G65240 25.946 370 227 15 128 465 72 426 8.18e-29 119
MS.gene029371.t1 AT5G45120 26.866 402 222 15 130 465 83 478 1.19e-27 115
MS.gene029371.t1 AT3G50050 28.333 360 224 13 127 465 90 436 2.45e-27 115
MS.gene029371.t1 AT5G22850 26.812 414 254 16 87 465 41 440 1.18e-26 112
MS.gene029371.t1 AT1G05840 28.117 377 216 15 128 465 78 438 1.18e-26 112
MS.gene029371.t1 AT4G12920 26.525 377 229 12 110 465 38 387 4.64e-25 107
MS.gene029371.t1 AT2G17760 27.747 364 217 15 130 465 104 449 7.22e-25 107
MS.gene029371.t1 AT3G51330 26.575 365 226 14 130 465 102 453 1.79e-24 105
MS.gene029371.t1 AT3G51330 26.575 365 226 14 130 465 102 453 2.81e-24 105
MS.gene029371.t1 AT1G08210 26.735 389 236 16 109 465 117 488 1.69e-23 103
MS.gene029371.t1 AT1G08210 26.735 389 236 16 109 465 103 474 1.73e-23 103
MS.gene029371.t1 AT1G08210 26.735 389 236 16 109 465 69 440 2.06e-23 103
MS.gene029371.t1 AT1G77480 26.440 382 226 17 120 465 57 419 1.38e-22 100
MS.gene029371.t1 AT4G33490 26.753 385 220 18 120 465 50 411 2.03e-22 99.8
MS.gene029371.t1 AT1G77480 26.440 382 226 17 120 465 57 419 2.65e-22 99.8
MS.gene029371.t1 AT3G51350 26.027 365 227 13 130 465 102 452 5.71e-22 99.0
MS.gene029371.t1 AT3G25700 26.948 308 162 11 76 325 23 325 3.05e-21 95.1
MS.gene029371.t1 AT3G25700 34.586 133 82 4 337 465 216 347 9.40e-13 69.7
MS.gene029371.t1 AT3G51340 25.275 364 225 14 130 465 103 447 8.55e-21 95.5
MS.gene029371.t1 AT3G51330 26.686 341 208 14 130 441 102 429 1.27e-20 94.7
MS.gene029371.t1 AT3G42550 25.000 352 214 11 127 465 75 389 1.64e-20 94.0
MS.gene029371.t1 AT1G08210 27.557 352 207 15 109 429 69 403 2.04e-20 94.4
MS.gene029371.t1 AT4G35880 24.654 361 231 11 130 465 107 451 8.62e-20 92.4
MS.gene029371.t1 AT4G33490 29.268 287 155 14 120 380 47 311 7.07e-19 89.0
MS.gene029371.t1 AT1G49050 22.667 375 242 18 130 465 30 395 9.61e-19 88.6
MS.gene029371.t1 AT4G16563 27.889 398 202 16 147 465 100 491 1.04e-18 89.0
MS.gene029371.t1 AT5G10080 25.067 375 221 14 130 465 100 453 1.28e-18 89.0
MS.gene029371.t1 AT3G51340 25.085 295 181 10 130 398 103 383 1.39e-16 82.0
MS.gene029371.t1 AT3G51340 23.324 373 233 14 130 465 103 459 4.72e-16 80.9
MS.gene029371.t1 AT3G51340 25.524 286 173 10 130 389 103 374 7.56e-16 79.7
MS.gene029371.t1 AT3G51360 23.973 438 281 16 62 465 26 445 7.76e-16 80.1
MS.gene029371.t1 AT3G51360 23.973 438 281 16 62 465 16 435 9.01e-16 80.1
MS.gene029371.t1 AT5G48430 32.121 165 104 4 301 461 229 389 2.34e-15 78.2
MS.gene029371.t1 AT3G51360 24.309 362 233 13 130 465 5 351 5.04e-15 77.0
MS.gene029371.t1 AT3G51360 24.800 375 233 14 62 405 26 382 7.35e-14 73.9
MS.gene029371.t1 AT3G51360 24.800 375 233 14 62 405 16 372 8.85e-14 73.6
MS.gene029371.t1 AT3G51360 24.672 381 226 14 62 405 26 382 1.12e-13 73.2
MS.gene029371.t1 AT3G51360 24.800 375 233 14 62 405 16 372 1.32e-13 72.8
MS.gene029371.t1 AT3G51360 24.776 335 193 13 62 361 26 336 6.79e-11 63.9

Find 125 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACACAGAGAAACTTTC+TGG 0.161885 1.4:-84990756 MS.gene029371:CDS
AACATCGAGCATTGTGGTTT+TGG 0.243063 1.4:+84991007 None:intergenic
TGATGCAGTTGGCTCGAAAA+TGG 0.248018 1.4:+84990575 None:intergenic
GTTGCTGTTGTTTAAAGTTT+TGG 0.252744 1.4:+84990943 None:intergenic
TTGATTTAACTTAGTTGTTA+TGG 0.270458 1.4:+84990782 None:intergenic
TTGACTTGTTCCGGAGATAA+TGG 0.270765 1.4:+84990731 None:intergenic
TGGCTCACCGATTCCGATTC+TGG 0.285369 1.4:+84990689 None:intergenic
GGCTTGTTCGTTGGTGCAGC+TGG 0.291445 1.4:-84990354 MS.gene029371:CDS
GCAATTAATTAGCAACTGTT+AGG 0.292112 1.4:+84989700 None:intergenic
AGTTACCATCGGCGTTAATA+AGG 0.302292 1.4:-84990415 MS.gene029371:CDS
TCATCTTCTTCATCTTGTTA+TGG 0.313576 1.4:-84991070 MS.gene029371:CDS
CACAATAATCCCTCCATTCC+CGG 0.318603 1.4:+84990074 None:intergenic
ATGTCTTCTTTGTCGATTAT+CGG 0.336218 1.4:-84989787 MS.gene029371:CDS
GTTGGTGCAGCTGGCTTAAT+CGG 0.352535 1.4:-84990345 MS.gene029371:CDS
CCGACGGTGGCGTTTCATTT+CGG 0.354586 1.4:-84989898 MS.gene029371:CDS
GACCTTGCAAATTCATTAGT+TGG 0.361959 1.4:-84989730 MS.gene029371:CDS
GGAGGGATTATTGTGGATTC+CGG 0.378793 1.4:-84990066 MS.gene029371:CDS
GCCGCTACCTTGACTTGTTC+CGG 0.382831 1.4:+84990722 None:intergenic
GTTCGTGATGCGTTTGTTAA+GGG 0.397061 1.4:-84990003 MS.gene029371:CDS
GGCTGAGTCGCGGTCGAGTC+GGG 0.408483 1.4:+84990815 None:intergenic
CGGCGAGTTGCTTGCAATAC+CGG 0.408895 1.4:-84990121 MS.gene029371:CDS
TGACTTGTTCCGGAGATAAT+GGG 0.411902 1.4:+84990732 None:intergenic
TGTCTTCTTTGTCGATTATC+GGG 0.415632 1.4:-84989786 MS.gene029371:CDS
ATCGGCTTGGCGGTAGCAAT+CGG 0.415933 1.4:+84990599 None:intergenic
TACCATTGCGACACTGAGAT+TGG 0.416758 1.4:+84990502 None:intergenic
GGTTCGTGATGCGTTTGTTA+AGG 0.425062 1.4:-84990004 MS.gene029371:CDS
ACGCCGTTACCGCGCCGTTA+CGG 0.430716 1.4:-84990200 MS.gene029371:CDS
TTTCGGAGAAGGGAAAGTTT+TGG 0.431549 1.4:-84989881 MS.gene029371:CDS
GAGGTGGATTCCGCCGGGAA+TGG 0.433765 1.4:-84990087 MS.gene029371:CDS
TTGGCGGTAGCAATCGGCGC+AGG 0.438339 1.4:+84990605 None:intergenic
ACACTGGAAGCGACATAAGC+TGG 0.442713 1.4:-84990641 MS.gene029371:CDS
GATGCAGTTGGCTCGAAAAT+GGG 0.447920 1.4:+84990576 None:intergenic
CAATTAATTAGCAACTGTTA+GGG 0.451342 1.4:+84989701 None:intergenic
TTACCTGGTACCGGTTGATT+CGG 0.452296 1.4:-84989842 MS.gene029371:CDS
ATGTTTCGAGAATGTGCTAA+TGG 0.459503 1.4:+84991041 None:intergenic
GGCTTAATCGGCTTAGGCGG+TGG 0.470335 1.4:-84990333 MS.gene029371:CDS
TGTAATCAGCATGTGAAGAA+AGG 0.480027 1.4:+84990853 None:intergenic
GTTACGGCGTAATCCGCAAT+TGG 0.482972 1.4:-84990184 MS.gene029371:CDS
GGGCTGAGTCGCGGTCGAGT+CGG 0.486283 1.4:+84990814 None:intergenic
GCAGCTGGCTTAATCGGCTT+AGG 0.488301 1.4:-84990339 MS.gene029371:CDS
GGCGAGTATTTCTCCAGAAT+CGG 0.492819 1.4:-84990702 MS.gene029371:CDS
CTGGTACCGGTTGATTCGGT+AGG 0.494194 1.4:-84989838 MS.gene029371:CDS
GTAATCAGCATGTGAAGAAA+GGG 0.507550 1.4:+84990854 None:intergenic
TGGCGTTTCATTTCGGAGAA+GGG 0.507830 1.4:-84989891 MS.gene029371:CDS
TATTACTATGTGGGACTGGT+AGG 0.508043 1.4:-84990156 MS.gene029371:CDS
GCATACATGGTTCTCGACAC+TGG 0.512255 1.4:-84990657 MS.gene029371:CDS
GTGGCGTTTCATTTCGGAGA+AGG 0.515188 1.4:-84989892 MS.gene029371:CDS
GTGGATTCCGCCGGGAATGG+AGG 0.519178 1.4:-84990084 MS.gene029371:CDS
AAAGTCCCTACCGAATCAAC+CGG 0.525956 1.4:+84989832 None:intergenic
CTTTCTGGACCCATTATCTC+CGG 0.526305 1.4:-84990741 MS.gene029371:CDS
AAGGTTAAGAATGTAGCGCT+AGG 0.528751 1.4:-84990396 MS.gene029371:CDS
CAACCGTGTCACCGCCGTGC+CGG 0.529136 1.4:+84990047 None:intergenic
CTTAACCTTATTAACGCCGA+TGG 0.530526 1.4:+84990410 None:intergenic
GGCGAAGAATTACCTGGTAC+CGG 0.532948 1.4:-84989851 MS.gene029371:CDS
AGTGGACCGTGATTCTGACT+TGG 0.537420 1.4:-84990259 MS.gene029371:CDS
TGGATTCCGCCGGGAATGGA+GGG 0.538719 1.4:-84990083 MS.gene029371:CDS
CGAAAATGGGATCGGCTTGG+CGG 0.539880 1.4:+84990589 None:intergenic
TCCACCTCAAAACTCGTCTC+CGG 0.540119 1.4:+84990102 None:intergenic
AGTTGTTATGGATTTGACTC+GGG 0.540361 1.4:+84990794 None:intergenic
CTACCGAATCAACCGGTACC+AGG 0.541898 1.4:+84989839 None:intergenic
TGGCGGTAGCAATCGGCGCA+GGG 0.543315 1.4:+84990606 None:intergenic
TATCAAGTCTCCTACGGCGA+TGG 0.544068 1.4:-84990471 MS.gene029371:CDS
AACGACACGTCATCCGTCGC+GGG 0.546298 1.4:+84989967 None:intergenic
GACGTCGAATTGAGCTGTGC+CGG 0.546577 1.4:+84990297 None:intergenic
TTCGTGATGCGTTTGTTAAG+GGG 0.547844 1.4:-84990002 MS.gene029371:CDS
ACGCCGTAACGGCGCGGTAA+CGG 0.550364 1.4:+84990197 None:intergenic
GTAACGGCGTCACGAGAAAA+CGG 0.553971 1.4:+84990213 None:intergenic
AGCTGTGCCGGAAAAGAAAG+TGG 0.554624 1.4:+84990309 None:intergenic
AAGAATGTAGCGCTAGGGTG+TGG 0.556353 1.4:-84990390 MS.gene029371:CDS
CACTGGAAGCGACATAAGCT+GGG 0.556372 1.4:-84990640 MS.gene029371:CDS
ATTCCGGCACGGCGGTGACA+CGG 0.556428 1.4:-84990050 MS.gene029371:CDS
TATTTCTCCAGAATCGGAAT+CGG 0.558867 1.4:-84990696 MS.gene029371:CDS
AACAACGAAGGCTTGTTCGT+TGG 0.564849 1.4:-84990363 MS.gene029371:CDS
TAGTTGTTATGGATTTGACT+CGG 0.565798 1.4:+84990793 None:intergenic
GGCGATGGCTCGTACACGTT+AGG 0.565988 1.4:-84990456 MS.gene029371:CDS
GTCAAGATATTTGCATTGAG+CGG 0.567683 1.4:+84990524 None:intergenic
GCCACCGAGTCAAGCATACA+TGG 0.568072 1.4:-84990670 MS.gene029371:CDS
CACGTATTACTATGTGGGAC+TGG 0.571523 1.4:-84990160 MS.gene029371:CDS
ATCGACAAAGAAGACATCGT+TGG 0.576136 1.4:+84989793 None:intergenic
TTGGACACGTATTACTATGT+GGG 0.577629 1.4:-84990165 MS.gene029371:CDS
GCAGAGCGATGTTTATAATG+TGG 0.578021 1.4:-84990025 MS.gene029371:CDS
GACAAAGGATTTGCCCGCGA+CGG 0.579763 1.4:-84989980 MS.gene029371:CDS
GACCAATCTCAGTGTCGCAA+TGG 0.580078 1.4:-84990504 MS.gene029371:CDS
GCTCGAAAATGGGATCGGCT+TGG 0.582434 1.4:+84990586 None:intergenic
ATCGGGAATATTCAACAGCA+AGG 0.582778 1.4:-84989769 MS.gene029371:CDS
GCTGGCTTAATCGGCTTAGG+CGG 0.584430 1.4:-84990336 MS.gene029371:CDS
ATTGGACACGTATTACTATG+TGG 0.586834 1.4:-84990166 MS.gene029371:CDS
TAGTAATACGTGTCCAATTG+CGG 0.587592 1.4:+84990171 None:intergenic
ATCCAACTAATGAATTTGCA+AGG 0.593800 1.4:+84989728 None:intergenic
ATTATCTCCGGAACAAGTCA+AGG 0.596309 1.4:-84990729 MS.gene029371:CDS
TGGTACCGGTTGATTCGGTA+GGG 0.596750 1.4:-84989837 MS.gene029371:CDS
CTGGTAGGGATAAGCGTCGG+CGG 0.597239 1.4:-84990141 MS.gene029371:CDS
TGTCTCTATCAAGTCTCCTA+CGG 0.598456 1.4:-84990477 MS.gene029371:CDS
TGCGTTTGTTAAGGGGACAA+AGG 0.599551 1.4:-84989995 MS.gene029371:CDS
AACGCCGATGGTAACTGTCT+CGG 0.600797 1.4:+84990422 None:intergenic
CGTGTACGAGCCATCGCCGT+AGG 0.604426 1.4:+84990461 None:intergenic
ATTACTATGTGGGACTGGTA+GGG 0.607196 1.4:-84990155 MS.gene029371:CDS
TCCGGAACAAGTCAAGGTAG+CGG 0.616809 1.4:-84990723 MS.gene029371:CDS
ACCATGTATGCTTGACTCGG+TGG 0.621193 1.4:+84990669 None:intergenic
ATTTGACTCGGGCTGAGTCG+CGG 0.623914 1.4:+84990805 None:intergenic
GACAAGCGTGGAAGTTCCGA+CGG 0.625543 1.4:-84989914 MS.gene029371:CDS
AGGTTAAGAATGTAGCGCTA+GGG 0.626074 1.4:-84990395 MS.gene029371:CDS
AATTAATTAGCAACTGTTAG+GGG 0.626928 1.4:+84989702 None:intergenic
CGGGAATGGAGGGATTATTG+TGG 0.628617 1.4:-84990073 MS.gene029371:CDS
GGTACCAGGTAATTCTTCGC+CGG 0.631903 1.4:+84989853 None:intergenic
AGTTGGCTCGAAAATGGGAT+CGG 0.634624 1.4:+84990581 None:intergenic
CAACGACACGTCATCCGTCG+CGG 0.637283 1.4:+84989966 None:intergenic
CCGAAATGAAACGCCACCGT+CGG 0.637864 1.4:+84989898 None:intergenic
TCGGGAATATTCAACAGCAA+GGG 0.638017 1.4:-84989768 MS.gene029371:CDS
GTGTAGGAAGCTGATGCAGT+TGG 0.639824 1.4:+84990564 None:intergenic
TTTGTCGTCGAAGACAAGCG+TGG 0.646119 1.4:-84989926 MS.gene029371:CDS
GATTATTGTGGATTCCGGCA+CGG 0.647183 1.4:-84990061 MS.gene029371:CDS
GCTTCCGGCGAAGAATTACC+TGG 0.648010 1.4:-84989857 MS.gene029371:CDS
AATTGCGGATTACGCCGTAA+CGG 0.648916 1.4:+84990186 None:intergenic
AGAACCATGTATGCTTGACT+CGG 0.649421 1.4:+84990666 None:intergenic
AGCAACAACATCGAGCATTG+TGG 0.657751 1.4:+84991001 None:intergenic
GTTACCGAGACAGTTACCAT+CGG 0.672706 1.4:-84990426 MS.gene029371:CDS
TTGAAACCAAGTCAGAATCA+CGG 0.674620 1.4:+84990253 None:intergenic
TTCACAAGAGAGCTGCGTGT+AGG 0.678677 1.4:+84990548 None:intergenic
AAGCGTGGAAGTTCCGACGG+TGG 0.688631 1.4:-84989911 MS.gene029371:CDS
CGGATTACGCCGTAACGGCG+CGG 0.703290 1.4:+84990191 None:intergenic
GGACTGGTAGGGATAAGCGT+CGG 0.705431 1.4:-84990144 MS.gene029371:CDS
GGGTGTGGTCATAACAACGA+AGG 0.707295 1.4:-84990375 MS.gene029371:CDS
TATTGTGGATTCCGGCACGG+CGG 0.740065 1.4:-84990058 MS.gene029371:CDS
AATAATCCCTCCATTCCCGG+CGG 0.769319 1.4:+84990077 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTAACTTAGTTGTTA+TGG + chr1.4:84990012-84990031 None:intergenic 20.0%
ATCCAACTAATGAATTTGCA+AGG + chr1.4:84991066-84991085 None:intergenic 30.0%
TAGTTGTTATGGATTTGACT+CGG + chr1.4:84990001-84990020 None:intergenic 30.0%
TCATCTTCTTCATCTTGTTA+TGG - chr1.4:84989721-84989740 MS.gene029371:CDS 30.0%
! ATGTCTTCTTTGTCGATTAT+CGG - chr1.4:84991004-84991023 MS.gene029371:CDS 30.0%
!! GTTGCTGTTGTTTAAAGTTT+TGG + chr1.4:84989851-84989870 None:intergenic 30.0%
AGTTGTTATGGATTTGACTC+GGG + chr1.4:84990000-84990019 None:intergenic 35.0%
ATGTTTCGAGAATGTGCTAA+TGG + chr1.4:84989753-84989772 None:intergenic 35.0%
ATTGGACACGTATTACTATG+TGG - chr1.4:84990625-84990644 MS.gene029371:CDS 35.0%
GACCTTGCAAATTCATTAGT+TGG - chr1.4:84991061-84991080 MS.gene029371:CDS 35.0%
GTAATCAGCATGTGAAGAAA+GGG + chr1.4:84989940-84989959 None:intergenic 35.0%
GTCAAGATATTTGCATTGAG+CGG + chr1.4:84990270-84990289 None:intergenic 35.0%
TAGTAATACGTGTCCAATTG+CGG + chr1.4:84990623-84990642 None:intergenic 35.0%
TATTTCTCCAGAATCGGAAT+CGG - chr1.4:84990095-84990114 MS.gene029371:CDS 35.0%
TGTAATCAGCATGTGAAGAA+AGG + chr1.4:84989941-84989960 None:intergenic 35.0%
TTCAACACAGAGAAACTTTC+TGG - chr1.4:84990035-84990054 MS.gene029371:CDS 35.0%
TTGAAACCAAGTCAGAATCA+CGG + chr1.4:84990541-84990560 None:intergenic 35.0%
TTGGACACGTATTACTATGT+GGG - chr1.4:84990626-84990645 MS.gene029371:CDS 35.0%
! TGTCTTCTTTGTCGATTATC+GGG - chr1.4:84991005-84991024 MS.gene029371:CDS 35.0%
AAGGTTAAGAATGTAGCGCT+AGG - chr1.4:84990395-84990414 MS.gene029371:CDS 40.0%
AGAACCATGTATGCTTGACT+CGG + chr1.4:84990128-84990147 None:intergenic 40.0%
AGGTTAAGAATGTAGCGCTA+GGG - chr1.4:84990396-84990415 MS.gene029371:CDS 40.0%
AGTTACCATCGGCGTTAATA+AGG - chr1.4:84990376-84990395 MS.gene029371:CDS 40.0%
ATCGACAAAGAAGACATCGT+TGG + chr1.4:84991001-84991020 None:intergenic 40.0%
ATCGGGAATATTCAACAGCA+AGG - chr1.4:84991022-84991041 MS.gene029371:CDS 40.0%
ATTATCTCCGGAACAAGTCA+AGG - chr1.4:84990062-84990081 MS.gene029371:CDS 40.0%
CTTAACCTTATTAACGCCGA+TGG + chr1.4:84990384-84990403 None:intergenic 40.0%
GCAGAGCGATGTTTATAATG+TGG - chr1.4:84990766-84990785 MS.gene029371:CDS 40.0%
TCGGGAATATTCAACAGCAA+GGG - chr1.4:84991023-84991042 MS.gene029371:CDS 40.0%
TGTCTCTATCAAGTCTCCTA+CGG - chr1.4:84990314-84990333 MS.gene029371:CDS 40.0%
! ATTACTATGTGGGACTGGTA+GGG - chr1.4:84990636-84990655 MS.gene029371:CDS 40.0%
! GTTCGTGATGCGTTTGTTAA+GGG - chr1.4:84990788-84990807 MS.gene029371:CDS 40.0%
! TATTACTATGTGGGACTGGT+AGG - chr1.4:84990635-84990654 MS.gene029371:CDS 40.0%
! TTCGTGATGCGTTTGTTAAG+GGG - chr1.4:84990789-84990808 MS.gene029371:CDS 40.0%
! TTTCGGAGAAGGGAAAGTTT+TGG - chr1.4:84990910-84990929 MS.gene029371:CDS 40.0%
!! AACATCGAGCATTGTGGTTT+TGG + chr1.4:84989787-84989806 None:intergenic 40.0%
!! GTCGTTTTCGTATTGCTTAG+TGG - chr1.4:84990514-84990533 MS.gene029371:CDS 40.0%
!! TGACTTGTTCCGGAGATAAT+GGG + chr1.4:84990062-84990081 None:intergenic 40.0%
!! TTGACTTGTTCCGGAGATAA+TGG + chr1.4:84990063-84990082 None:intergenic 40.0%
!!! ATTGTGGTTTTGGCATTGTG+GGG + chr1.4:84989777-84989796 None:intergenic 40.0%
!!! CATTGTGGTTTTGGCATTGT+GGG + chr1.4:84989778-84989797 None:intergenic 40.0%
AAAGTCCCTACCGAATCAAC+CGG + chr1.4:84990962-84990981 None:intergenic 45.0%
CACAATAATCCCTCCATTCC+CGG + chr1.4:84990720-84990739 None:intergenic 45.0%
CACGTATTACTATGTGGGAC+TGG - chr1.4:84990631-84990650 MS.gene029371:CDS 45.0%
CTTTCTGGACCCATTATCTC+CGG - chr1.4:84990050-84990069 MS.gene029371:CDS 45.0%
GATTATTGTGGATTCCGGCA+CGG - chr1.4:84990730-84990749 MS.gene029371:CDS 45.0%
GGAGGGATTATTGTGGATTC+CGG - chr1.4:84990725-84990744 MS.gene029371:CDS 45.0%
GGCGAGTATTTCTCCAGAAT+CGG - chr1.4:84990089-84990108 MS.gene029371:CDS 45.0%
GTTACCGAGACAGTTACCAT+CGG - chr1.4:84990365-84990384 MS.gene029371:CDS 45.0%
TACCATTGCGACACTGAGAT+TGG + chr1.4:84990292-84990311 None:intergenic 45.0%
TGGCGTTTCATTTCGGAGAA+GGG - chr1.4:84990900-84990919 MS.gene029371:CDS 45.0%
! AACAACGAAGGCTTGTTCGT+TGG - chr1.4:84990428-84990447 MS.gene029371:CDS 45.0%
! AATACCGGAGACGAGTTTTG+AGG - chr1.4:84990685-84990704 MS.gene029371:CDS 45.0%
! AATTGCGGATTACGCCGTAA+CGG + chr1.4:84990608-84990627 None:intergenic 45.0%
! AGCAACAACATCGAGCATTG+TGG + chr1.4:84989793-84989812 None:intergenic 45.0%
! GGTTCGTGATGCGTTTGTTA+AGG - chr1.4:84990787-84990806 MS.gene029371:CDS 45.0%
! TGCGTTTGTTAAGGGGACAA+AGG - chr1.4:84990796-84990815 MS.gene029371:CDS 45.0%
!! AGTTGGCTCGAAAATGGGAT+CGG + chr1.4:84990213-84990232 None:intergenic 45.0%
!! GATGCAGTTGGCTCGAAAAT+GGG + chr1.4:84990218-84990237 None:intergenic 45.0%
!! TGATGCAGTTGGCTCGAAAA+TGG + chr1.4:84990219-84990238 None:intergenic 45.0%
!! TTACCTGGTACCGGTTGATT+CGG - chr1.4:84990949-84990968 MS.gene029371:CDS 45.0%
!!! AGGGAAAGTTTTGGTGCTTC+CGG - chr1.4:84990919-84990938 MS.gene029371:CDS 45.0%
!!! GCATTGTGGTTTTGGCATTG+TGG + chr1.4:84989779-84989798 None:intergenic 45.0%
AACGCCGATGGTAACTGTCT+CGG + chr1.4:84990372-84990391 None:intergenic 50.0%
AAGAATGTAGCGCTAGGGTG+TGG - chr1.4:84990401-84990420 MS.gene029371:CDS 50.0%
AATAATCCCTCCATTCCCGG+CGG + chr1.4:84990717-84990736 None:intergenic 50.0%
ACACTGGAAGCGACATAAGC+TGG - chr1.4:84990150-84990169 MS.gene029371:CDS 50.0%
AGCTGTGCCGGAAAAGAAAG+TGG + chr1.4:84990485-84990504 None:intergenic 50.0%
AGTGGACCGTGATTCTGACT+TGG - chr1.4:84990532-84990551 MS.gene029371:CDS 50.0%
CACTGGAAGCGACATAAGCT+GGG - chr1.4:84990151-84990170 MS.gene029371:CDS 50.0%
CGGGAATGGAGGGATTATTG+TGG - chr1.4:84990718-84990737 MS.gene029371:CDS 50.0%
GACCAATCTCAGTGTCGCAA+TGG - chr1.4:84990287-84990306 MS.gene029371:CDS 50.0%
GCATACATGGTTCTCGACAC+TGG - chr1.4:84990134-84990153 MS.gene029371:CDS 50.0%
GGCGAAGAATTACCTGGTAC+CGG - chr1.4:84990940-84990959 MS.gene029371:CDS 50.0%
GGGTGTGGTCATAACAACGA+AGG - chr1.4:84990416-84990435 MS.gene029371:CDS 50.0%
GGTACCAGGTAATTCTTCGC+CGG + chr1.4:84990941-84990960 None:intergenic 50.0%
GTAACGGCGTCACGAGAAAA+CGG + chr1.4:84990581-84990600 None:intergenic 50.0%
GTGGCGTTTCATTTCGGAGA+AGG - chr1.4:84990899-84990918 MS.gene029371:CDS 50.0%
GTGTAGGAAGCTGATGCAGT+TGG + chr1.4:84990230-84990249 None:intergenic 50.0%
GTTACGGCGTAATCCGCAAT+TGG - chr1.4:84990607-84990626 MS.gene029371:CDS 50.0%
TATCAAGTCTCCTACGGCGA+TGG - chr1.4:84990320-84990339 MS.gene029371:CDS 50.0%
TCCACCTCAAAACTCGTCTC+CGG + chr1.4:84990692-84990711 None:intergenic 50.0%
TCCGGAACAAGTCAAGGTAG+CGG - chr1.4:84990068-84990087 MS.gene029371:CDS 50.0%
TTCACAAGAGAGCTGCGTGT+AGG + chr1.4:84990246-84990265 None:intergenic 50.0%
TTTGTCGTCGAAGACAAGCG+TGG - chr1.4:84990865-84990884 MS.gene029371:CDS 50.0%
! CGGTGGTCCACTTTCTTTTC+CGG - chr1.4:84990475-84990494 MS.gene029371:CDS 50.0%
! GTTGGTGCAGCTGGCTTAAT+CGG - chr1.4:84990446-84990465 MS.gene029371:CDS 50.0%
!! ACCATGTATGCTTGACTCGG+TGG + chr1.4:84990125-84990144 None:intergenic 50.0%
!! TGGTACCGGTTGATTCGGTA+GGG - chr1.4:84990954-84990973 MS.gene029371:CDS 50.0%
!!! AGTTTTGAGGTGGATTCCGC+CGG - chr1.4:84990698-84990717 MS.gene029371:CDS 50.0%
CCGAAATGAAACGCCACCGT+CGG + chr1.4:84990896-84990915 None:intergenic 55.0%
CCGACGGTGGCGTTTCATTT+CGG - chr1.4:84990893-84990912 MS.gene029371:CDS 55.0%
CGGCGAGTTGCTTGCAATAC+CGG - chr1.4:84990670-84990689 MS.gene029371:CDS 55.0%
CTACCGAATCAACCGGTACC+AGG + chr1.4:84990955-84990974 None:intergenic 55.0%
GACAAAGGATTTGCCCGCGA+CGG - chr1.4:84990811-84990830 MS.gene029371:CDS 55.0%
GACAAGCGTGGAAGTTCCGA+CGG - chr1.4:84990877-84990896 MS.gene029371:CDS 55.0%
GACGTCGAATTGAGCTGTGC+CGG + chr1.4:84990497-84990516 None:intergenic 55.0%
GCCACCGAGTCAAGCATACA+TGG - chr1.4:84990121-84990140 MS.gene029371:CDS 55.0%
GCTCGAAAATGGGATCGGCT+TGG + chr1.4:84990208-84990227 None:intergenic 55.0%
GCTTCCGGCGAAGAATTACC+TGG - chr1.4:84990934-84990953 MS.gene029371:CDS 55.0%
TATTGTGGATTCCGGCACGG+CGG - chr1.4:84990733-84990752 MS.gene029371:CDS 55.0%
! GCAGCTGGCTTAATCGGCTT+AGG - chr1.4:84990452-84990471 MS.gene029371:CDS 55.0%
! GCTGGCTTAATCGGCTTAGG+CGG - chr1.4:84990455-84990474 MS.gene029371:CDS 55.0%
! GGACTGGTAGGGATAAGCGT+CGG - chr1.4:84990647-84990666 MS.gene029371:CDS 55.0%
!! ATCGGCTTGGCGGTAGCAAT+CGG + chr1.4:84990195-84990214 None:intergenic 55.0%
!! ATTTGACTCGGGCTGAGTCG+CGG + chr1.4:84989989-84990008 None:intergenic 55.0%
!! CGAAAATGGGATCGGCTTGG+CGG + chr1.4:84990205-84990224 None:intergenic 55.0%
!! CTGGTACCGGTTGATTCGGT+AGG - chr1.4:84990953-84990972 MS.gene029371:CDS 55.0%
!! GCCGCTACCTTGACTTGTTC+CGG + chr1.4:84990072-84990091 None:intergenic 55.0%
!! TGGCTCACCGATTCCGATTC+TGG + chr1.4:84990105-84990124 None:intergenic 55.0%
!!! ACCGGAGACGAGTTTTGAGG+TGG - chr1.4:84990688-84990707 MS.gene029371:CDS 55.0%
!!! GTTTTGAGGTGGATTCCGCC+GGG - chr1.4:84990699-84990718 MS.gene029371:CDS 55.0%
AACGACACGTCATCCGTCGC+GGG + chr1.4:84990827-84990846 None:intergenic 60.0%
AAGCGTGGAAGTTCCGACGG+TGG - chr1.4:84990880-84990899 MS.gene029371:CDS 60.0%
CAACGACACGTCATCCGTCG+CGG + chr1.4:84990828-84990847 None:intergenic 60.0%
GGCGATGGCTCGTACACGTT+AGG - chr1.4:84990335-84990354 MS.gene029371:CDS 60.0%
TGGATTCCGCCGGGAATGGA+GGG - chr1.4:84990708-84990727 MS.gene029371:CDS 60.0%
! GGCTTAATCGGCTTAGGCGG+TGG - chr1.4:84990458-84990477 MS.gene029371:CDS 60.0%
! GGCTTGTTCGTTGGTGCAGC+TGG - chr1.4:84990437-84990456 MS.gene029371:CDS 60.0%
!! CTGGTAGGGATAAGCGTCGG+CGG - chr1.4:84990650-84990669 MS.gene029371:CDS 60.0%
ACGCCGTAACGGCGCGGTAA+CGG + chr1.4:84990597-84990616 None:intergenic 65.0%
ACGCCGTTACCGCGCCGTTA+CGG - chr1.4:84990591-84990610 MS.gene029371:CDS 65.0%
ATTCCGGCACGGCGGTGACA+CGG - chr1.4:84990741-84990760 MS.gene029371:CDS 65.0%
CGGATTACGCCGTAACGGCG+CGG + chr1.4:84990603-84990622 None:intergenic 65.0%
CGTGTACGAGCCATCGCCGT+AGG + chr1.4:84990333-84990352 None:intergenic 65.0%
GTGGATTCCGCCGGGAATGG+AGG - chr1.4:84990707-84990726 MS.gene029371:CDS 65.0%
TGGCGGTAGCAATCGGCGCA+GGG + chr1.4:84990188-84990207 None:intergenic 65.0%
TTGGCGGTAGCAATCGGCGC+AGG + chr1.4:84990189-84990208 None:intergenic 65.0%
! GAGGTGGATTCCGCCGGGAA+TGG - chr1.4:84990704-84990723 MS.gene029371:CDS 65.0%
CAACCGTGTCACCGCCGTGC+CGG + chr1.4:84990747-84990766 None:intergenic 70.0%
GGCTGAGTCGCGGTCGAGTC+GGG + chr1.4:84989979-84989998 None:intergenic 70.0%
GGGCTGAGTCGCGGTCGAGT+CGG + chr1.4:84989980-84989999 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 84989708 84991105 84989708 ID=MS.gene029371
chr1.4 mRNA 84989708 84991105 84989708 ID=MS.gene029371.t1;Parent=MS.gene029371
chr1.4 exon 84989708 84991105 84989708 ID=MS.gene029371.t1.exon1;Parent=MS.gene029371.t1
chr1.4 CDS 84989708 84991105 84989708 ID=cds.MS.gene029371.t1;Parent=MS.gene029371.t1
Gene Sequence

>MS.gene029371

ATGGGTCTCAAATTCATCTTCTTCATCTTGTTATGGACTTCTCCATTAGCACATTCTCGAAACATACCCCACAATGCCAAAACCACAATGCTCGATGTTGTTGCTTCAATTCAAAAAACATATCAAGTTCTCAACTTCAGCCAAAACTTTAAACAACAGCAACAACAACAAAAGAGTTCATTTACTTCATCAACATCAACACTCTCTTTGCAACTTCATTCACGTGCATCCCTTTCTTCACATGCTGATTACAAGTCACTAACATTATCCCGACTCGACCGCGACTCAGCCCGAGTCAAATCCATAACAACTAAGTTAAATCAAAACTTCAACACAGAGAAACTTTCTGGACCCATTATCTCCGGAACAAGTCAAGGTAGCGGCGAGTATTTCTCCAGAATCGGAATCGGTGAGCCACCGAGTCAAGCATACATGGTTCTCGACACTGGAAGCGACATAAGCTGGGTACAATGCGCACCCTGCGCCGATTGCTACCGCCAAGCCGATCCCATTTTCGAGCCAACTGCATCAGCTTCCTACACGCAGCTCTCTTGTGAAGCCGCTCAATGCAAATATCTTGACCAATCTCAGTGTCGCAATGGTAACTGTCTCTATCAAGTCTCCTACGGCGATGGCTCGTACACGTTAGGAGACTTTGTTACCGAGACAGTTACCATCGGCGTTAATAAGGTTAAGAATGTAGCGCTAGGGTGTGGTCATAACAACGAAGGCTTGTTCGTTGGTGCAGCTGGCTTAATCGGCTTAGGCGGTGGTCCACTTTCTTTTCCGGCACAGCTCAATTCGACGTCGTTTTCGTATTGCTTAGTGGACCGTGATTCTGACTTGGTTTCAACGTTAGAGTTTGATTCACCGTTTTCTCGTGACGCCGTTACCGCGCCGTTACGGCGTAATCCGCAATTGGACACGTATTACTATGTGGGACTGGTAGGGATAAGCGTCGGCGGCGAGTTGCTTGCAATACCGGAGACGAGTTTTGAGGTGGATTCCGCCGGGAATGGAGGGATTATTGTGGATTCCGGCACGGCGGTGACACGGTTGCAGAGCGATGTTTATAATGTGGTTCGTGATGCGTTTGTTAAGGGGACAAAGGATTTGCCCGCGACGGATGACGTGTCGTTGTTTGATACGTGTTATGATTTGTCGTCGAAGACAAGCGTGGAAGTTCCGACGGTGGCGTTTCATTTCGGAGAAGGGAAAGTTTTGGTGCTTCCGGCGAAGAATTACCTGGTACCGGTTGATTCGGTAGGGACTTTCTGTTTTGCGTTTGCTCCAACGATGTCTTCTTTGTCGATTATCGGGAATATTCAACAGCAAGGGACACGTGTCAGTTTTGACCTTGCAAATTCATTAGTTGGATTTTCCCCTAACAGTTGCTAA
Protein sequence

>MS.gene029371.t1

MGLKFIFFILLWTSPLAHSRNIPHNAKTTMLDVVASIQKTYQVLNFSQNFKQQQQQQKSSFTSSTSTLSLQLHSRASLSSHADYKSLTLSRLDRDSARVKSITTKLNQNFNTEKLSGPIISGTSQGSGEYFSRIGIGEPPSQAYMVLDTGSDISWVQCAPCADCYRQADPIFEPTASASYTQLSCEAAQCKYLDQSQCRNGNCLYQVSYGDGSYTLGDFVTETVTIGVNKVKNVALGCGHNNEGLFVGAAGLIGLGGGPLSFPAQLNSTSFSYCLVDRDSDLVSTLEFDSPFSRDAVTAPLRRNPQLDTYYYVGLVGISVGGELLAIPETSFEVDSAGNGGIIVDSGTAVTRLQSDVYNVVRDAFVKGTKDLPATDDVSLFDTCYDLSSKTSVEVPTVAFHFGEGKVLVLPAKNYLVPVDSVGTFCFAFAPTMSSLSIIGNIQQQGTRVSFDLANSLVGFSPNSC