Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49425.t1 | XP_013470408.1 | 97.1 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 7.20E-213 | 749.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49425.t1 | Q9LHE3 | 73.7 | 384 | 95 | 1 | 1 | 378 | 85 | 468 | 2.6e-171 | 602.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49425.t1 | A0A072VS01 | 97.1 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 5.2e-213 | 749.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene49425 | 0.827003 | 1.99E-54 | -1.69E-46 |
| MS.gene04932 | MS.gene49425 | 0.815392 | 9.47E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene49425 | -0.831781 | 1.37E-55 | -1.69E-46 |
| MS.gene050326 | MS.gene49425 | 0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene050328 | MS.gene49425 | 0.812342 | 4.45E-51 | -1.69E-46 |
| MS.gene050338 | MS.gene49425 | 0.848629 | 5.43E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene49425 | -0.803323 | 3.68E-49 | -1.69E-46 |
| MS.gene050707 | MS.gene49425 | 0.803692 | 3.09E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene49425 | 0.843741 | 1.16E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene49425 | -0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene49425 | 0.848233 | 6.98E-60 | -1.69E-46 |
| MS.gene051517 | MS.gene49425 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene49425 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene49425 | -0.830035 | 3.68E-55 | -1.69E-46 |
| MS.gene052308 | MS.gene49425 | 0.805464 | 1.32E-49 | -1.69E-46 |
| MS.gene052383 | MS.gene49425 | 0.811032 | 8.57E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene49425 | -0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene49425 | 0.824507 | 7.77E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene49425 | -0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene49425 | -0.807418 | 5.11E-50 | -1.69E-46 |
| MS.gene053108 | MS.gene49425 | 0.813852 | 2.07E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene49425 | -0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene49425 | -0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene054270 | MS.gene49425 | 0.812354 | 4.42E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene49425 | -0.804689 | 1.92E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene49425 | -0.833177 | 6.20E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene49425 | 0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene49425 | -0.81951 | 1.12E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene49425 | 0.811287 | 7.55E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene49425 | 0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene055731 | MS.gene49425 | 0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene055858 | MS.gene49425 | 0.817423 | 3.32E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene49425 | -0.834987 | 2.18E-56 | -1.69E-46 |
| MS.gene056198 | MS.gene49425 | 0.803735 | 3.03E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene49425 | -0.869044 | 4.16E-66 | -1.69E-46 |
| MS.gene056504 | MS.gene49425 | -0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene05652 | MS.gene49425 | 0.845184 | 4.76E-59 | -1.69E-46 |
| MS.gene056590 | MS.gene49425 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene49425 | 0.807458 | 5.01E-50 | -1.69E-46 |
| MS.gene056618 | MS.gene49425 | 0.854891 | 9.10E-62 | -1.69E-46 |
| MS.gene056688 | MS.gene49425 | 0.824774 | 6.73E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene49425 | 0.821494 | 3.92E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene49425 | 0.847187 | 1.36E-59 | -1.69E-46 |
| MS.gene057367 | MS.gene49425 | 0.80206 | 6.71E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene49425 | -0.80779 | 4.26E-50 | -1.69E-46 |
| MS.gene057669 | MS.gene49425 | 0.816815 | 4.55E-52 | -1.69E-46 |
| MS.gene057717 | MS.gene49425 | 0.865189 | 7.07E-65 | -1.69E-46 |
| MS.gene058334 | MS.gene49425 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene058382 | MS.gene49425 | 0.832056 | 1.18E-55 | -1.69E-46 |
| MS.gene058418 | MS.gene49425 | 0.819047 | 1.43E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene49425 | 0.821217 | 4.54E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene49425 | -0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene49425 | -0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene05914 | MS.gene49425 | -0.808125 | 3.61E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene49425 | 0.874533 | 6.27E-68 | -1.69E-46 |
| MS.gene059512 | MS.gene49425 | -0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene05960 | MS.gene49425 | 0.871521 | 6.41E-67 | -1.69E-46 |
| MS.gene060405 | MS.gene49425 | 0.863922 | 1.76E-64 | -1.69E-46 |
| MS.gene061044 | MS.gene49425 | 0.832009 | 1.21E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49425 | MS.gene071433 | PPI |
| MS.gene49425 | MS.gene065102 | PPI |
| MS.gene76272 | MS.gene49425 | PPI |
| MS.gene49425 | MS.gene029370 | PPI |
| MS.gene029371 | MS.gene49425 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49425.t1 | MTR_1g115210 | 97.090 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 0.0 | 750 |
| MS.gene49425.t1 | MTR_1g039270 | 71.948 | 385 | 101 | 2 | 1 | 378 | 83 | 467 | 0.0 | 554 |
| MS.gene49425.t1 | MTR_1g111350 | 50.789 | 380 | 177 | 4 | 1 | 378 | 94 | 465 | 5.07e-131 | 384 |
| MS.gene49425.t1 | MTR_7g117430 | 49.608 | 383 | 187 | 5 | 1 | 378 | 101 | 482 | 5.83e-122 | 361 |
| MS.gene49425.t1 | MTR_6g085010 | 44.924 | 394 | 196 | 6 | 1 | 380 | 104 | 490 | 7.85e-110 | 330 |
| MS.gene49425.t1 | MTR_8g103880 | 38.547 | 358 | 211 | 6 | 20 | 373 | 96 | 448 | 4.75e-89 | 276 |
| MS.gene49425.t1 | MTR_3g097150 | 38.381 | 383 | 212 | 10 | 6 | 377 | 74 | 443 | 3.34e-82 | 258 |
| MS.gene49425.t1 | MTR_4g007740 | 36.776 | 397 | 219 | 10 | 4 | 379 | 91 | 476 | 5.17e-73 | 235 |
| MS.gene49425.t1 | MTR_3g053710 | 39.106 | 358 | 195 | 10 | 37 | 378 | 114 | 464 | 8.13e-72 | 232 |
| MS.gene49425.t1 | MTR_5g044770 | 36.932 | 352 | 202 | 11 | 39 | 379 | 85 | 427 | 1.66e-69 | 225 |
| MS.gene49425.t1 | MTR_3g046300 | 36.000 | 375 | 203 | 7 | 32 | 377 | 89 | 455 | 2.76e-69 | 225 |
| MS.gene49425.t1 | MTR_8g096990 | 34.026 | 385 | 235 | 11 | 6 | 379 | 52 | 428 | 9.23e-67 | 218 |
| MS.gene49425.t1 | MTR_2g028190 | 33.251 | 406 | 225 | 14 | 3 | 377 | 58 | 448 | 1.18e-66 | 218 |
| MS.gene49425.t1 | MTR_3g053980 | 39.944 | 358 | 196 | 8 | 32 | 378 | 134 | 483 | 1.18e-66 | 219 |
| MS.gene49425.t1 | MTR_5g080890 | 35.537 | 363 | 195 | 11 | 39 | 379 | 85 | 430 | 2.90e-65 | 214 |
| MS.gene49425.t1 | MTR_5g080960 | 35.813 | 363 | 194 | 11 | 39 | 379 | 85 | 430 | 2.21e-64 | 212 |
| MS.gene49425.t1 | MTR_5g091130 | 33.661 | 407 | 239 | 10 | 1 | 377 | 145 | 550 | 3.78e-64 | 214 |
| MS.gene49425.t1 | MTR_8g038280 | 34.551 | 356 | 210 | 11 | 39 | 379 | 85 | 432 | 1.17e-61 | 204 |
| MS.gene49425.t1 | MTR_2g059460 | 32.990 | 388 | 225 | 12 | 10 | 379 | 33 | 403 | 7.50e-58 | 194 |
| MS.gene49425.t1 | MTR_6g090290 | 34.197 | 386 | 234 | 9 | 8 | 379 | 54 | 433 | 3.53e-57 | 193 |
| MS.gene49425.t1 | MTR_2g059490 | 34.637 | 358 | 214 | 12 | 40 | 382 | 58 | 410 | 6.21e-56 | 190 |
| MS.gene49425.t1 | MTR_0036s0110 | 29.902 | 408 | 234 | 15 | 3 | 383 | 61 | 443 | 4.94e-55 | 187 |
| MS.gene49425.t1 | MTR_2g067830 | 33.333 | 393 | 234 | 16 | 6 | 379 | 20 | 403 | 1.13e-54 | 186 |
| MS.gene49425.t1 | MTR_5g038360 | 32.316 | 393 | 242 | 13 | 1 | 379 | 51 | 433 | 3.00e-54 | 185 |
| MS.gene49425.t1 | MTR_0036s0070 | 30.909 | 385 | 233 | 12 | 10 | 379 | 57 | 423 | 4.33e-53 | 182 |
| MS.gene49425.t1 | MTR_8g038310 | 32.134 | 389 | 227 | 12 | 2 | 379 | 48 | 410 | 4.48e-53 | 181 |
| MS.gene49425.t1 | MTR_3g028120 | 33.799 | 358 | 213 | 12 | 38 | 379 | 86 | 435 | 4.53e-53 | 182 |
| MS.gene49425.t1 | MTR_6g088760 | 32.425 | 367 | 220 | 12 | 1 | 347 | 46 | 404 | 1.05e-52 | 183 |
| MS.gene49425.t1 | MTR_4g109760 | 33.994 | 353 | 206 | 11 | 41 | 379 | 56 | 395 | 3.18e-52 | 179 |
| MS.gene49425.t1 | MTR_5g008150 | 32.376 | 383 | 236 | 11 | 12 | 379 | 35 | 409 | 3.16e-51 | 177 |
| MS.gene49425.t1 | MTR_5g008070 | 33.518 | 361 | 215 | 10 | 37 | 383 | 78 | 427 | 4.69e-51 | 176 |
| MS.gene49425.t1 | MTR_5g008110 | 32.958 | 355 | 216 | 11 | 39 | 379 | 66 | 412 | 1.91e-50 | 174 |
| MS.gene49425.t1 | MTR_8g038250 | 32.670 | 352 | 202 | 9 | 39 | 379 | 85 | 412 | 7.56e-50 | 173 |
| MS.gene49425.t1 | MTR_0036s0050 | 30.326 | 399 | 234 | 12 | 10 | 383 | 57 | 436 | 1.23e-49 | 173 |
| MS.gene49425.t1 | MTR_0024s0040 | 32.295 | 353 | 216 | 12 | 41 | 379 | 64 | 407 | 3.82e-49 | 171 |
| MS.gene49425.t1 | MTR_1g037630 | 34.971 | 346 | 207 | 9 | 38 | 376 | 90 | 424 | 3.15e-48 | 169 |
| MS.gene49425.t1 | MTR_3g014290 | 34.971 | 346 | 207 | 9 | 38 | 376 | 78 | 412 | 4.44e-48 | 168 |
| MS.gene49425.t1 | MTR_2g105300 | 31.552 | 393 | 219 | 17 | 6 | 379 | 20 | 381 | 5.61e-48 | 167 |
| MS.gene49425.t1 | MTR_5g044570 | 31.486 | 397 | 219 | 18 | 2 | 379 | 46 | 408 | 6.06e-46 | 162 |
| MS.gene49425.t1 | MTR_4g045857 | 40.092 | 217 | 117 | 6 | 40 | 243 | 58 | 274 | 8.19e-45 | 156 |
| MS.gene49425.t1 | MTR_8g039540 | 35.652 | 345 | 207 | 10 | 38 | 376 | 94 | 429 | 2.87e-44 | 159 |
| MS.gene49425.t1 | MTR_2g055840 | 31.180 | 356 | 213 | 10 | 41 | 370 | 14 | 363 | 1.14e-42 | 153 |
| MS.gene49425.t1 | MTR_3g100500 | 32.584 | 356 | 222 | 9 | 30 | 376 | 87 | 433 | 4.02e-42 | 153 |
| MS.gene49425.t1 | MTR_2g070430 | 29.396 | 381 | 219 | 12 | 38 | 380 | 85 | 453 | 4.34e-38 | 142 |
| MS.gene49425.t1 | MTR_1g060750 | 26.650 | 394 | 235 | 15 | 7 | 383 | 21 | 377 | 1.40e-37 | 139 |
| MS.gene49425.t1 | MTR_7g102750 | 28.019 | 414 | 253 | 14 | 1 | 379 | 36 | 439 | 2.72e-33 | 130 |
| MS.gene49425.t1 | MTR_3g068000 | 29.491 | 373 | 213 | 17 | 43 | 376 | 76 | 437 | 8.87e-33 | 128 |
| MS.gene49425.t1 | MTR_7g102750 | 28.462 | 390 | 234 | 14 | 1 | 355 | 36 | 415 | 5.83e-32 | 125 |
| MS.gene49425.t1 | MTR_4g100990 | 28.000 | 400 | 218 | 16 | 40 | 376 | 74 | 466 | 7.47e-32 | 125 |
| MS.gene49425.t1 | MTR_7g062360 | 30.667 | 375 | 204 | 18 | 43 | 376 | 62 | 421 | 5.97e-31 | 122 |
| MS.gene49425.t1 | MTR_5g012490 | 26.434 | 401 | 228 | 15 | 40 | 379 | 74 | 468 | 8.47e-31 | 122 |
| MS.gene49425.t1 | MTR_7g105850 | 28.608 | 388 | 214 | 14 | 39 | 377 | 89 | 462 | 3.41e-30 | 121 |
| MS.gene49425.t1 | MTR_2g063110 | 25.850 | 441 | 257 | 14 | 1 | 377 | 71 | 505 | 1.27e-29 | 120 |
| MS.gene49425.t1 | MTR_2g084550 | 28.852 | 357 | 198 | 16 | 39 | 357 | 76 | 414 | 5.38e-29 | 117 |
| MS.gene49425.t1 | MTR_4g056420 | 27.419 | 372 | 229 | 15 | 38 | 379 | 75 | 435 | 2.15e-28 | 116 |
| MS.gene49425.t1 | MTR_4g095270 | 26.722 | 363 | 232 | 12 | 38 | 384 | 78 | 422 | 2.95e-28 | 116 |
| MS.gene49425.t1 | MTR_3g065160 | 27.198 | 364 | 223 | 15 | 43 | 379 | 77 | 425 | 3.28e-28 | 115 |
| MS.gene49425.t1 | MTR_1g061940 | 27.845 | 413 | 254 | 14 | 1 | 379 | 41 | 443 | 3.96e-28 | 115 |
| MS.gene49425.t1 | MTR_4g095270 | 26.722 | 363 | 232 | 12 | 38 | 384 | 78 | 422 | 4.82e-28 | 116 |
| MS.gene49425.t1 | MTR_5g016260 | 26.039 | 361 | 237 | 11 | 38 | 384 | 86 | 430 | 1.21e-27 | 114 |
| MS.gene49425.t1 | MTR_5g077850 | 27.273 | 363 | 228 | 15 | 43 | 379 | 84 | 436 | 1.28e-27 | 113 |
| MS.gene49425.t1 | MTR_5g016260 | 25.762 | 361 | 238 | 11 | 38 | 384 | 86 | 430 | 2.33e-27 | 114 |
| MS.gene49425.t1 | MTR_7g021510 | 25.526 | 380 | 232 | 13 | 32 | 375 | 64 | 428 | 7.48e-27 | 111 |
| MS.gene49425.t1 | MTR_5g008090 | 29.967 | 307 | 184 | 11 | 92 | 379 | 17 | 311 | 1.41e-26 | 108 |
| MS.gene49425.t1 | MTR_1g078240 | 25.995 | 377 | 234 | 14 | 32 | 375 | 61 | 425 | 1.30e-25 | 108 |
| MS.gene49425.t1 | MTR_7g080230 | 25.532 | 376 | 235 | 14 | 32 | 375 | 63 | 425 | 2.88e-25 | 107 |
| MS.gene49425.t1 | MTR_1g078240 | 28.308 | 325 | 198 | 13 | 32 | 331 | 61 | 375 | 6.39e-25 | 105 |
| MS.gene49425.t1 | MTR_1g078240 | 25.995 | 377 | 233 | 15 | 32 | 375 | 61 | 424 | 1.63e-24 | 105 |
| MS.gene49425.t1 | MTR_5g022880 | 26.110 | 383 | 212 | 16 | 41 | 383 | 113 | 464 | 1.77e-22 | 99.4 |
| MS.gene49425.t1 | MTR_8g094590 | 24.798 | 371 | 230 | 15 | 39 | 379 | 72 | 423 | 1.65e-21 | 95.9 |
| MS.gene49425.t1 | MTR_6g084710 | 25.238 | 420 | 249 | 20 | 2 | 375 | 145 | 545 | 1.82e-21 | 96.7 |
| MS.gene49425.t1 | MTR_8g075010 | 26.133 | 375 | 220 | 14 | 41 | 382 | 101 | 451 | 2.34e-21 | 95.9 |
| MS.gene49425.t1 | MTR_5g077920 | 26.625 | 323 | 206 | 13 | 43 | 342 | 71 | 385 | 2.39e-20 | 92.4 |
| MS.gene49425.t1 | MTR_6g084710 | 26.871 | 294 | 183 | 12 | 2 | 273 | 145 | 428 | 2.49e-20 | 92.8 |
| MS.gene49425.t1 | MTR_3g096930 | 25.067 | 375 | 223 | 15 | 39 | 379 | 83 | 433 | 3.53e-20 | 92.0 |
| MS.gene49425.t1 | MTR_8g075090 | 27.446 | 368 | 208 | 20 | 41 | 375 | 113 | 454 | 4.86e-20 | 92.0 |
| MS.gene49425.t1 | MTR_8g075090 | 27.446 | 368 | 208 | 20 | 41 | 375 | 113 | 454 | 5.34e-20 | 91.7 |
| MS.gene49425.t1 | MTR_8g094590 | 28.175 | 252 | 149 | 10 | 39 | 276 | 72 | 305 | 9.83e-20 | 89.4 |
| MS.gene49425.t1 | MTR_5g061690 | 25.564 | 399 | 250 | 14 | 1 | 375 | 69 | 444 | 1.46e-19 | 90.5 |
| MS.gene49425.t1 | MTR_8g094590 | 28.175 | 252 | 149 | 10 | 39 | 276 | 72 | 305 | 2.20e-19 | 89.4 |
| MS.gene49425.t1 | MTR_8g075090 | 27.597 | 308 | 174 | 16 | 41 | 320 | 113 | 399 | 2.74e-18 | 86.7 |
| MS.gene49425.t1 | MTR_2g022450 | 24.747 | 396 | 223 | 16 | 35 | 375 | 35 | 410 | 8.71e-18 | 84.7 |
| MS.gene49425.t1 | MTR_4g023650 | 25.581 | 387 | 224 | 19 | 31 | 376 | 52 | 415 | 4.22e-17 | 82.8 |
| MS.gene49425.t1 | MTR_1g029810 | 25.203 | 369 | 224 | 15 | 39 | 375 | 56 | 404 | 5.10e-17 | 82.4 |
| MS.gene49425.t1 | MTR_1g029810 | 25.203 | 369 | 224 | 15 | 39 | 375 | 56 | 404 | 6.09e-17 | 82.4 |
| MS.gene49425.t1 | MTR_3g006820 | 23.575 | 386 | 245 | 17 | 26 | 379 | 44 | 411 | 2.82e-16 | 80.1 |
| MS.gene49425.t1 | MTR_3g087780 | 24.654 | 361 | 231 | 11 | 41 | 375 | 100 | 445 | 4.23e-16 | 80.1 |
| MS.gene49425.t1 | MTR_4g023630 | 24.416 | 385 | 231 | 17 | 31 | 376 | 52 | 415 | 6.72e-16 | 79.3 |
| MS.gene49425.t1 | MTR_4g117090 | 23.342 | 407 | 223 | 17 | 40 | 375 | 49 | 437 | 8.27e-13 | 69.7 |
| MS.gene49425.t1 | MTR_7g080230 | 23.256 | 344 | 213 | 15 | 72 | 383 | 33 | 357 | 4.20e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49425.t1 | AT3G20015 | 73.698 | 384 | 95 | 1 | 1 | 378 | 85 | 468 | 0.0 | 557 |
| MS.gene49425.t1 | AT3G18490 | 50.505 | 396 | 175 | 4 | 1 | 378 | 106 | 498 | 2.08e-132 | 389 |
| MS.gene49425.t1 | AT1G25510 | 47.837 | 393 | 186 | 4 | 1 | 378 | 93 | 481 | 7.98e-127 | 374 |
| MS.gene49425.t1 | AT1G01300 | 49.096 | 387 | 186 | 5 | 1 | 377 | 96 | 481 | 3.53e-120 | 357 |
| MS.gene49425.t1 | AT3G61820 | 47.074 | 393 | 189 | 6 | 1 | 375 | 87 | 478 | 3.90e-116 | 347 |
| MS.gene49425.t1 | AT5G10770 | 39.130 | 391 | 218 | 9 | 1 | 378 | 88 | 471 | 4.20e-85 | 266 |
| MS.gene49425.t1 | AT5G10760 | 38.120 | 383 | 223 | 7 | 1 | 378 | 89 | 462 | 1.90e-73 | 236 |
| MS.gene49425.t1 | AT2G03200 | 36.944 | 360 | 205 | 10 | 37 | 379 | 103 | 457 | 2.82e-73 | 236 |
| MS.gene49425.t1 | AT5G33340 | 35.623 | 393 | 231 | 12 | 1 | 379 | 49 | 433 | 2.36e-66 | 217 |
| MS.gene49425.t1 | AT1G79720 | 35.279 | 394 | 223 | 7 | 4 | 375 | 94 | 477 | 6.81e-66 | 217 |
| MS.gene49425.t1 | AT1G64830 | 35.115 | 393 | 230 | 13 | 2 | 379 | 45 | 427 | 1.47e-63 | 209 |
| MS.gene49425.t1 | AT3G25700 | 33.867 | 375 | 220 | 11 | 28 | 375 | 71 | 444 | 9.80e-61 | 202 |
| MS.gene49425.t1 | AT3G59080 | 32.000 | 400 | 247 | 7 | 2 | 377 | 131 | 529 | 4.22e-58 | 198 |
| MS.gene49425.t1 | AT2G42980 | 33.085 | 402 | 241 | 11 | 2 | 377 | 122 | 521 | 2.69e-57 | 196 |
| MS.gene49425.t1 | AT1G09750 | 33.247 | 385 | 236 | 10 | 4 | 377 | 71 | 445 | 1.13e-56 | 192 |
| MS.gene49425.t1 | AT2G28040 | 32.303 | 356 | 204 | 9 | 40 | 382 | 55 | 386 | 7.80e-55 | 185 |
| MS.gene49425.t1 | AT2G28040 | 32.303 | 356 | 204 | 9 | 40 | 382 | 64 | 395 | 1.15e-54 | 185 |
| MS.gene49425.t1 | AT3G54400 | 33.913 | 345 | 213 | 8 | 38 | 376 | 85 | 420 | 4.10e-54 | 184 |
| MS.gene49425.t1 | AT2G28010 | 31.218 | 394 | 227 | 10 | 1 | 382 | 35 | 396 | 4.17e-52 | 179 |
| MS.gene49425.t1 | AT2G28030 | 32.203 | 354 | 206 | 9 | 41 | 382 | 61 | 392 | 1.70e-51 | 177 |
| MS.gene49425.t1 | AT3G59080 | 31.139 | 395 | 221 | 8 | 2 | 377 | 131 | 493 | 3.44e-50 | 176 |
| MS.gene49425.t1 | AT1G31450 | 29.923 | 391 | 246 | 12 | 10 | 379 | 57 | 440 | 1.51e-47 | 167 |
| MS.gene49425.t1 | AT2G28220 | 31.198 | 359 | 207 | 12 | 41 | 382 | 67 | 402 | 3.88e-46 | 163 |
| MS.gene49425.t1 | AT2G35615 | 28.753 | 393 | 253 | 13 | 10 | 379 | 54 | 442 | 4.95e-45 | 161 |
| MS.gene49425.t1 | AT5G07030 | 33.238 | 349 | 213 | 9 | 38 | 376 | 112 | 450 | 5.18e-45 | 161 |
| MS.gene49425.t1 | AT4G30040 | 31.503 | 346 | 207 | 11 | 41 | 367 | 85 | 419 | 2.00e-41 | 151 |
| MS.gene49425.t1 | AT2G28225 | 29.096 | 354 | 212 | 11 | 41 | 379 | 67 | 396 | 2.39e-41 | 150 |
| MS.gene49425.t1 | AT2G23945 | 31.073 | 354 | 203 | 15 | 41 | 367 | 96 | 435 | 9.63e-39 | 144 |
| MS.gene49425.t1 | AT3G12700 | 28.354 | 395 | 253 | 13 | 4 | 378 | 74 | 458 | 1.47e-34 | 133 |
| MS.gene49425.t1 | AT3G02740 | 28.532 | 361 | 221 | 14 | 41 | 375 | 10 | 359 | 3.21e-34 | 131 |
| MS.gene49425.t1 | AT3G02740 | 28.650 | 363 | 222 | 14 | 39 | 375 | 83 | 434 | 3.52e-34 | 132 |
| MS.gene49425.t1 | AT4G30030 | 30.612 | 343 | 202 | 14 | 41 | 364 | 78 | 403 | 4.30e-34 | 131 |
| MS.gene49425.t1 | AT2G36670 | 30.649 | 385 | 223 | 15 | 29 | 379 | 82 | 456 | 8.23e-34 | 131 |
| MS.gene49425.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 34 | 390 | 2.23e-33 | 129 |
| MS.gene49425.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 34 | 390 | 2.23e-33 | 129 |
| MS.gene49425.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 105 | 461 | 2.82e-33 | 130 |
| MS.gene49425.t1 | AT2G39710 | 29.867 | 375 | 211 | 17 | 43 | 378 | 67 | 428 | 3.97e-33 | 129 |
| MS.gene49425.t1 | AT5G43100 | 28.291 | 357 | 220 | 13 | 38 | 375 | 73 | 412 | 3.16e-32 | 127 |
| MS.gene49425.t1 | AT5G43100 | 28.291 | 357 | 220 | 13 | 38 | 375 | 73 | 412 | 4.05e-32 | 128 |
| MS.gene49425.t1 | AT5G36260 | 27.660 | 329 | 202 | 12 | 39 | 344 | 76 | 391 | 1.91e-30 | 122 |
| MS.gene49425.t1 | AT1G66180 | 27.596 | 366 | 232 | 13 | 38 | 379 | 69 | 425 | 6.12e-30 | 119 |
| MS.gene49425.t1 | AT5G22850 | 28.312 | 385 | 230 | 18 | 3 | 357 | 49 | 417 | 3.01e-29 | 119 |
| MS.gene49425.t1 | AT5G02190 | 29.491 | 373 | 203 | 19 | 50 | 377 | 82 | 439 | 2.44e-28 | 115 |
| MS.gene49425.t1 | AT1G05840 | 27.493 | 371 | 220 | 15 | 39 | 375 | 78 | 433 | 2.80e-28 | 115 |
| MS.gene49425.t1 | AT5G37540 | 27.222 | 360 | 227 | 13 | 43 | 375 | 82 | 433 | 9.86e-28 | 114 |
| MS.gene49425.t1 | AT3G50050 | 27.297 | 370 | 222 | 13 | 38 | 384 | 90 | 435 | 1.11e-26 | 112 |
| MS.gene49425.t1 | AT1G65240 | 26.444 | 329 | 203 | 13 | 39 | 344 | 72 | 384 | 3.37e-26 | 109 |
| MS.gene49425.t1 | AT5G45120 | 24.939 | 413 | 240 | 16 | 30 | 379 | 72 | 477 | 1.76e-25 | 107 |
| MS.gene49425.t1 | AT1G49050 | 25.416 | 421 | 241 | 19 | 7 | 379 | 172 | 567 | 2.38e-24 | 105 |
| MS.gene49425.t1 | AT1G49050 | 28.146 | 302 | 181 | 13 | 7 | 287 | 172 | 458 | 3.31e-24 | 103 |
| MS.gene49425.t1 | AT3G25700 | 38.926 | 149 | 77 | 4 | 28 | 162 | 71 | 219 | 3.88e-24 | 102 |
| MS.gene49425.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 82 | 439 | 6.87e-24 | 103 |
| MS.gene49425.t1 | AT1G77480 | 27.805 | 410 | 231 | 20 | 5 | 379 | 39 | 418 | 7.89e-24 | 102 |
| MS.gene49425.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 116 | 473 | 7.90e-24 | 103 |
| MS.gene49425.t1 | AT3G52500 | 27.202 | 386 | 223 | 15 | 39 | 376 | 88 | 463 | 9.32e-24 | 102 |
| MS.gene49425.t1 | AT1G77480 | 27.805 | 410 | 231 | 20 | 5 | 379 | 39 | 418 | 1.16e-23 | 102 |
| MS.gene49425.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 130 | 487 | 1.32e-23 | 102 |
| MS.gene49425.t1 | AT1G49050 | 25.065 | 387 | 220 | 18 | 41 | 379 | 30 | 394 | 1.39e-23 | 101 |
| MS.gene49425.t1 | AT4G12920 | 26.425 | 386 | 227 | 12 | 6 | 367 | 22 | 374 | 6.69e-23 | 99.4 |
| MS.gene49425.t1 | AT1G08210 | 28.829 | 333 | 199 | 13 | 39 | 344 | 82 | 403 | 7.74e-23 | 100 |
| MS.gene49425.t1 | AT3G51350 | 26.301 | 365 | 207 | 15 | 41 | 375 | 102 | 434 | 3.34e-21 | 95.5 |
| MS.gene49425.t1 | AT2G17760 | 25.824 | 364 | 226 | 15 | 41 | 379 | 104 | 448 | 4.19e-20 | 92.4 |
| MS.gene49425.t1 | AT3G51340 | 28.065 | 367 | 205 | 18 | 41 | 375 | 103 | 442 | 1.38e-19 | 90.9 |
| MS.gene49425.t1 | AT4G35880 | 24.595 | 370 | 228 | 13 | 41 | 382 | 107 | 453 | 1.70e-19 | 90.5 |
| MS.gene49425.t1 | AT4G16563 | 26.952 | 397 | 203 | 17 | 58 | 376 | 100 | 487 | 3.76e-19 | 89.4 |
| MS.gene49425.t1 | AT4G35880 | 25.656 | 343 | 204 | 13 | 41 | 355 | 107 | 426 | 1.80e-18 | 87.0 |
| MS.gene49425.t1 | AT1G44130 | 26.247 | 381 | 212 | 18 | 39 | 379 | 47 | 398 | 3.76e-18 | 85.9 |
| MS.gene49425.t1 | AT4G33490 | 25.266 | 376 | 223 | 15 | 39 | 379 | 58 | 410 | 4.19e-18 | 85.9 |
| MS.gene49425.t1 | AT3G51340 | 27.707 | 314 | 174 | 14 | 41 | 325 | 103 | 392 | 1.15e-17 | 84.3 |
| MS.gene49425.t1 | AT4G33490 | 29.930 | 284 | 156 | 13 | 13 | 275 | 27 | 288 | 2.83e-17 | 83.2 |
| MS.gene49425.t1 | AT3G42550 | 23.810 | 378 | 213 | 16 | 1 | 357 | 43 | 366 | 1.07e-16 | 81.6 |
| MS.gene49425.t1 | AT5G10080 | 24.129 | 402 | 251 | 15 | 13 | 378 | 68 | 451 | 1.64e-16 | 81.6 |
| MS.gene49425.t1 | AT3G51360 | 23.925 | 372 | 236 | 14 | 35 | 379 | 93 | 444 | 6.72e-16 | 79.7 |
| MS.gene49425.t1 | AT3G51360 | 23.873 | 377 | 240 | 14 | 35 | 384 | 83 | 439 | 7.86e-16 | 79.3 |
| MS.gene49425.t1 | AT3G51360 | 24.713 | 348 | 215 | 14 | 35 | 355 | 93 | 420 | 1.19e-15 | 78.6 |
| MS.gene49425.t1 | AT3G51360 | 24.839 | 310 | 189 | 12 | 35 | 320 | 93 | 382 | 1.54e-15 | 78.2 |
| MS.gene49425.t1 | AT3G51360 | 24.713 | 348 | 215 | 14 | 35 | 355 | 83 | 410 | 1.89e-15 | 77.8 |
| MS.gene49425.t1 | AT3G51360 | 23.720 | 371 | 236 | 14 | 41 | 384 | 5 | 355 | 1.97e-15 | 77.8 |
| MS.gene49425.t1 | AT3G51340 | 26.804 | 291 | 163 | 13 | 41 | 302 | 103 | 372 | 2.21e-15 | 77.4 |
| MS.gene49425.t1 | AT3G51360 | 24.839 | 310 | 189 | 12 | 35 | 320 | 83 | 372 | 2.30e-15 | 77.4 |
| MS.gene49425.t1 | AT3G51340 | 26.804 | 291 | 163 | 13 | 41 | 302 | 103 | 372 | 2.69e-15 | 77.8 |
| MS.gene49425.t1 | AT3G51360 | 25.000 | 264 | 156 | 10 | 35 | 276 | 93 | 336 | 3.13e-13 | 70.5 |
| MS.gene49425.t1 | AT5G48430 | 28.448 | 232 | 147 | 7 | 159 | 375 | 161 | 388 | 7.56e-13 | 69.7 |
Find 154 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGGGCAGTGACATTATT+TGG | 0.112279 | 1.3:+78164061 | MS.gene49425:CDS |
| GGCTTTCGGGTCTTGGAGTT+GGG | 0.185714 | 1.3:+78164571 | MS.gene49425:CDS |
| TTCGGGTCGGGTGTGGTTTC+GGG | 0.195700 | 1.3:+78163961 | MS.gene49425:CDS |
| GCATTTGCTCCTTCTTCTTC+AGG | 0.218132 | 1.3:+78164912 | MS.gene49425:CDS |
| AATGGATACTCCTGATGTTT+TGG | 0.222815 | 1.3:-78164748 | None:intergenic |
| GTTCGGGTCGGGTGTGGTTT+CGG | 0.228106 | 1.3:+78163960 | MS.gene49425:CDS |
| GCCGGCTTACAATGCATTTC+GGG | 0.244466 | 1.3:+78164695 | MS.gene49425:CDS |
| GGTATGTTTGTTGGAGCAGC+TGG | 0.262458 | 1.3:+78164348 | MS.gene49425:CDS |
| TCATCTGGGTCGCTAGAATT+TGG | 0.263511 | 1.3:+78164471 | MS.gene49425:CDS |
| TGCCGTTATGAGGTTTCTTA+TGG | 0.268217 | 1.3:+78164225 | MS.gene49425:CDS |
| CGCCGGCTTACAATGCATTT+CGG | 0.291370 | 1.3:+78164694 | MS.gene49425:CDS |
| GGATGGAGCTAATGGGTATA+TGG | 0.294523 | 1.3:+78164983 | MS.gene49425:CDS |
| TATATCGGGCTTTCGGGTCT+TGG | 0.310043 | 1.3:+78164564 | MS.gene49425:CDS |
| ATCGTACTATATAGGATAAA+TGG | 0.314844 | 1.3:+78165164 | MS.gene49425:intron |
| GGGCTTTCGGGTCTTGGAGT+TGG | 0.316663 | 1.3:+78164570 | MS.gene49425:CDS |
| CGCCAGTCTGACCACCTAAT+TGG | 0.318952 | 1.3:-78164410 | None:intergenic |
| GCAGCTGGGTTGTTGGGTCT+TGG | 0.325606 | 1.3:+78164363 | MS.gene49425:CDS |
| TCTTCAGGACTTTCCATCAT+AGG | 0.325784 | 1.3:+78164927 | MS.gene49425:CDS |
| AAACGGGTTTGTGACGGTTC+GGG | 0.329915 | 1.3:+78164791 | MS.gene49425:CDS |
| AAATTTCAATCCCTTCTTGC+TGG | 0.331540 | 1.3:-78164956 | None:intergenic |
| GAATGGAGAGAGATTCTAAA+AGG | 0.332342 | 1.3:+78163884 | None:intergenic |
| TTGCTGGATGTTTCCTATGA+TGG | 0.341457 | 1.3:-78164940 | None:intergenic |
| AAATGAATTGGGTGAGGGAG+GGG | 0.345584 | 1.3:+78164632 | MS.gene49425:CDS |
| ACCCGAGAAATAAAATGATA+TGG | 0.346874 | 1.3:-78164820 | None:intergenic |
| GCTTTCGGGTCTTGGAGTTG+GGG | 0.348212 | 1.3:+78164572 | MS.gene49425:CDS |
| CCAATACGTGGTTATTGATT+CGG | 0.350961 | 1.3:+78164044 | MS.gene49425:CDS |
| ATTTCAGTGGATGGAGCTAA+TGG | 0.353637 | 1.3:+78164975 | MS.gene49425:CDS |
| GCTAATGGGTATATGGGATT+TGG | 0.357251 | 1.3:+78164990 | MS.gene49425:CDS |
| GGGTTGTTGGGTCTTGGAAG+TGG | 0.359095 | 1.3:+78164369 | MS.gene49425:CDS |
| CTTTCGGGTCTTGGAGTTGG+GGG | 0.359398 | 1.3:+78164573 | MS.gene49425:CDS |
| GACACATGTTATGATTTAAA+CGG | 0.361043 | 1.3:+78164774 | MS.gene49425:CDS |
| GAGCCCGTGGGTTATGAATC+AGG | 0.367672 | 1.3:-78164530 | None:intergenic |
| TTCGGGCAGTGACATTATTT+GGG | 0.368954 | 1.3:+78164062 | MS.gene49425:CDS |
| TAGTTATTGTTTAGTGAGTC+GGG | 0.376613 | 1.3:+78164440 | MS.gene49425:CDS |
| CAATACGTGGTTATTGATTC+GGG | 0.383620 | 1.3:+78164045 | MS.gene49425:CDS |
| GTCGGGTGTGGTTTCGGGTA+TGG | 0.397951 | 1.3:+78163966 | MS.gene49425:CDS |
| GGTTGTTGGGTCTTGGAAGT+GGG | 0.398428 | 1.3:+78164370 | MS.gene49425:CDS |
| TAAACGGGTTTGTGACGGTT+CGG | 0.403107 | 1.3:+78164790 | MS.gene49425:CDS |
| GCCGTTATGAGGTTTCTTAT+GGG | 0.404335 | 1.3:+78164226 | MS.gene49425:CDS |
| AGTCGGGGCACTGAATCATC+TGG | 0.406241 | 1.3:+78164456 | MS.gene49425:CDS |
| ACACATGTTATGATTTAAAC+GGG | 0.407880 | 1.3:+78164775 | MS.gene49425:CDS |
| GTTGGAGCAGCTGGGTTGTT+GGG | 0.408232 | 1.3:+78164357 | MS.gene49425:CDS |
| GGGGTTGAGGGTTCCTATAT+CGG | 0.418943 | 1.3:+78164593 | MS.gene49425:CDS |
| TGTTGGAGCAGCTGGGTTGT+TGG | 0.420595 | 1.3:+78164356 | MS.gene49425:CDS |
| TGCCCTTGAGACTGTTACAT+TGG | 0.427294 | 1.3:+78164275 | MS.gene49425:CDS |
| GGTATGAAACAGAGGAGTTC+GGG | 0.428364 | 1.3:+78163944 | MS.gene49425:CDS |
| GGAGAGTATTTCGTAAGAAT+AGG | 0.441186 | 1.3:+78164000 | MS.gene49425:CDS |
| AGGAACCAGGGTATGTTTGT+TGG | 0.444845 | 1.3:+78164339 | MS.gene49425:CDS |
| CGGGTGTGGGCATAGGAACC+AGG | 0.446262 | 1.3:+78164326 | MS.gene49425:CDS |
| TTAGTTATTGTTTAGTGAGT+CGG | 0.448984 | 1.3:+78164439 | MS.gene49425:CDS |
| CGGCGAATCGCCGGTAGCGT+CGG | 0.452344 | 1.3:+78163922 | MS.gene49425:CDS |
| TATGAGGTTTCTTATGGGGA+TGG | 0.454223 | 1.3:+78164231 | MS.gene49425:CDS |
| GTGATCCGAAACGTGGCTAT+CGG | 0.454470 | 1.3:+78164306 | MS.gene49425:CDS |
| CGGTGCCTGTGGGTGCTTCG+TGG | 0.456663 | 1.3:+78164502 | MS.gene49425:CDS |
| GCCCTTGAGACTGTTACATT+GGG | 0.458217 | 1.3:+78164276 | MS.gene49425:CDS |
| CGAAACGTGGCTATCGGGTG+TGG | 0.461598 | 1.3:+78164312 | MS.gene49425:CDS |
| CCGAATCAATAACCACGTAT+TGG | 0.463017 | 1.3:-78164044 | None:intergenic |
| GCCGTTGTGCGGCGAATCGC+CGG | 0.464829 | 1.3:+78163913 | MS.gene49425:CDS |
| GGGGATTCTTCATCTTATGC+TGG | 0.467858 | 1.3:+78164141 | MS.gene49425:CDS |
| GCTAGAATTTGGACGAGAAT+CGG | 0.468088 | 1.3:+78164482 | MS.gene49425:CDS |
| GGGTATGAAACAGAGGAGTT+CGG | 0.473494 | 1.3:+78163943 | MS.gene49425:CDS |
| TGATCCGAAACGTGGCTATC+GGG | 0.475223 | 1.3:+78164307 | MS.gene49425:CDS |
| GTCGGATTGGTGATAACATT+GGG | 0.477208 | 1.3:-78164103 | None:intergenic |
| GGCGAATCGCCGGTAGCGTC+GGG | 0.478355 | 1.3:+78163923 | MS.gene49425:CDS |
| ATGAGGTTTCTTATGGGGAT+GGG | 0.479148 | 1.3:+78164232 | MS.gene49425:CDS |
| GATGGAGCTAATGGGTATAT+GGG | 0.482882 | 1.3:+78164984 | MS.gene49425:CDS |
| TGAAGGGAGGTGCCGTTATG+AGG | 0.492322 | 1.3:+78164215 | MS.gene49425:CDS |
| TAAATGAATTGGGTGAGGGA+GGG | 0.493214 | 1.3:+78164631 | MS.gene49425:CDS |
| TGGCTATCGGGTGTGGGCAT+AGG | 0.493489 | 1.3:+78164319 | MS.gene49425:CDS |
| TTTCGGGTCTTGGAGTTGGG+GGG | 0.497028 | 1.3:+78164574 | MS.gene49425:CDS |
| GGTGCCTGTGGGTGCTTCGT+GGG | 0.499303 | 1.3:+78164503 | MS.gene49425:CDS |
| TGGTGATAACATTGGGTACA+TGG | 0.501291 | 1.3:-78164096 | None:intergenic |
| TTTCAGTGGATGGAGCTAAT+GGG | 0.503081 | 1.3:+78164976 | MS.gene49425:CDS |
| GAAACAGAGGAGTTCGGGTC+GGG | 0.503157 | 1.3:+78163949 | MS.gene49425:CDS |
| GGGATTGAAATTTCAGTGGA+TGG | 0.503329 | 1.3:+78164966 | MS.gene49425:CDS |
| CTAGCTGGAAGGGTCAATAT+AGG | 0.505927 | 1.3:-78164846 | None:intergenic |
| TATTTCGTAAGAATAGGAGT+TGG | 0.506635 | 1.3:+78164006 | MS.gene49425:CDS |
| AGAGGAGTTCGGGTCGGGTG+TGG | 0.509324 | 1.3:+78163954 | MS.gene49425:CDS |
| GGCCAATTAGGTGGTCAGAC+TGG | 0.513423 | 1.3:+78164408 | MS.gene49425:CDS |
| GGAGGGGTGGTCATGGACAC+CGG | 0.514573 | 1.3:+78164648 | MS.gene49425:CDS |
| CACACCCGATAGCCACGTTT+CGG | 0.514707 | 1.3:-78164311 | None:intergenic |
| GGGTGAGGGAGGGGTGGTCA+TGG | 0.515063 | 1.3:+78164641 | MS.gene49425:CDS |
| TCGGTTAAATGAATTGGGTG+AGG | 0.515639 | 1.3:+78164626 | MS.gene49425:CDS |
| TTAAATGAATTGGGTGAGGG+AGG | 0.517316 | 1.3:+78164630 | MS.gene49425:CDS |
| GGAATTAAGAAGTTCCTAGC+TGG | 0.517708 | 1.3:-78164861 | None:intergenic |
| GCATAAGATGAAGAATCCCC+CGG | 0.520903 | 1.3:-78164138 | None:intergenic |
| GAGAAATAAAATGATATGGT+TGG | 0.523017 | 1.3:-78164816 | None:intergenic |
| GGGATGGGTCCTATACTAAA+GGG | 0.523693 | 1.3:+78164247 | MS.gene49425:CDS |
| CCGTTATGAGGTTTCTTATG+GGG | 0.528759 | 1.3:+78164227 | MS.gene49425:CDS |
| TGTAGCCGTGTGGAGAATGC+AGG | 0.531669 | 1.3:+78164186 | MS.gene49425:CDS |
| CGGTTAAATGAATTGGGTGA+GGG | 0.533268 | 1.3:+78164627 | MS.gene49425:CDS |
| TCCCGAAATGCATTGTAAGC+CGG | 0.534505 | 1.3:-78164696 | None:intergenic |
| TAACCTCGTCACGGCAGTGC+CGG | 0.534510 | 1.3:-78164667 | None:intergenic |
| TTTCCCTGATTCATAACCCA+CGG | 0.537283 | 1.3:+78164526 | MS.gene49425:CDS |
| TGAATTGGGTGAGGGAGGGG+TGG | 0.537828 | 1.3:+78164635 | MS.gene49425:CDS |
| GGGGATGGGTCCTATACTAA+AGG | 0.538590 | 1.3:+78164246 | MS.gene49425:CDS |
| GGCAAGTGTCCCTTTAGTAT+AGG | 0.540324 | 1.3:-78164256 | None:intergenic |
| CTTGAGACTGTTACATTGGG+AGG | 0.541400 | 1.3:+78164279 | MS.gene49425:CDS |
| TCGGGTATGGAGCAAGGAAG+TGG | 0.542447 | 1.3:+78163979 | MS.gene49425:CDS |
| ACCGGCGATTCGCCGCACAA+CGG | 0.545210 | 1.3:-78163914 | None:intergenic |
| ACAAACCTACCCAAAACATC+AGG | 0.549290 | 1.3:+78164738 | MS.gene49425:CDS |
| TAGGAAACATCCAGCAAGAA+GGG | 0.550149 | 1.3:+78164946 | MS.gene49425:CDS |
| GAAACCCACGAAGCACCCAC+AGG | 0.551071 | 1.3:-78164507 | None:intergenic |
| GGTCGGATTGGTGATAACAT+TGG | 0.551981 | 1.3:-78164104 | None:intergenic |
| CTTAATTCCAGTGGATAGTG+TGG | 0.552435 | 1.3:+78164875 | MS.gene49425:CDS |
| GTGGTTTCGGGTATGGAGCA+AGG | 0.556095 | 1.3:+78163973 | MS.gene49425:CDS |
| TCTTATGCTGGTGTGTCTTG+CGG | 0.561796 | 1.3:+78164153 | MS.gene49425:CDS |
| TTAAGAAGTTCCTAGCTGGA+AGG | 0.562288 | 1.3:-78164857 | None:intergenic |
| TTCCCTGATTCATAACCCAC+GGG | 0.562661 | 1.3:+78164527 | MS.gene49425:CDS |
| CTCCCAATGTAACAGTCTCA+AGG | 0.565490 | 1.3:-78164278 | None:intergenic |
| ATGGAAAGTCCTGAAGAAGA+AGG | 0.565827 | 1.3:-78164921 | None:intergenic |
| CTATATTGACCCTTCCAGCT+AGG | 0.565963 | 1.3:+78164847 | MS.gene49425:CDS |
| AATGGAGAGAGATTCTAAAA+GGG | 0.567636 | 1.3:+78163885 | None:intergenic |
| ATTGGGTACATGGTTGACAC+TGG | 0.572469 | 1.3:-78164086 | None:intergenic |
| GAGAATGCAGGGTGTCATGA+AGG | 0.574020 | 1.3:+78164198 | MS.gene49425:CDS |
| ATAGGAAACATCCAGCAAGA+AGG | 0.574037 | 1.3:+78164945 | MS.gene49425:CDS |
| AGCCCGTGGGTTATGAATCA+GGG | 0.574204 | 1.3:-78164529 | None:intergenic |
| GTCGGGGCACTGAATCATCT+GGG | 0.576511 | 1.3:+78164457 | MS.gene49425:CDS |
| TTAATTCCAGTGGATAGTGT+GGG | 0.577939 | 1.3:+78164876 | MS.gene49425:CDS |
| AAAGTTCCCACACTATCCAC+TGG | 0.580370 | 1.3:-78164882 | None:intergenic |
| ATTCTCCACACGGCTACATA+CGG | 0.584742 | 1.3:-78164181 | None:intergenic |
| AATGCATTGTAAGCCGGCGT+AGG | 0.585492 | 1.3:-78164690 | None:intergenic |
| AGAAGGGATTGAAATTTCAG+TGG | 0.588453 | 1.3:+78164962 | MS.gene49425:CDS |
| TGATTTAAACGGGTTTGTGA+CGG | 0.594090 | 1.3:+78164785 | MS.gene49425:CDS |
| TGGACGAGAATCGGTGCCTG+TGG | 0.598034 | 1.3:+78164491 | MS.gene49425:CDS |
| AAAGGGTCACCGCCGTTGTG+CGG | 0.600828 | 1.3:+78163902 | MS.gene49425:CDS |
| GGCGATTCGCCGCACAACGG+CGG | 0.601835 | 1.3:-78163911 | None:intergenic |
| GAAACGTGGCTATCGGGTGT+GGG | 0.602041 | 1.3:+78164313 | MS.gene49425:CDS |
| GTATGTTTGTTGGAGCAGCT+GGG | 0.602077 | 1.3:+78164349 | MS.gene49425:CDS |
| TCCCAATGTAACAGTCTCAA+GGG | 0.603717 | 1.3:-78164277 | None:intergenic |
| TGTTTCATACCCGACGCTAC+CGG | 0.608322 | 1.3:-78163932 | None:intergenic |
| TAATTGGCCTACAAAAGACA+TGG | 0.608647 | 1.3:-78164394 | None:intergenic |
| TAGGAACTTCTTAATTCCAG+TGG | 0.615344 | 1.3:+78164866 | MS.gene49425:CDS |
| ATGTTATCACCAATCCGACC+CGG | 0.616285 | 1.3:+78164107 | MS.gene49425:CDS |
| CCCCATAAGAAACCTCATAA+CGG | 0.617736 | 1.3:-78164227 | None:intergenic |
| TGAAACAGAGGAGTTCGGGT+CGG | 0.622350 | 1.3:+78163948 | MS.gene49425:CDS |
| TAAGAAGTTCCTAGCTGGAA+GGG | 0.625100 | 1.3:-78164856 | None:intergenic |
| AGAATGCAGGGTGTCATGAA+GGG | 0.627661 | 1.3:+78164199 | MS.gene49425:CDS |
| CTGCTCCAACAAACATACCC+TGG | 0.630612 | 1.3:-78164344 | None:intergenic |
| AGTTATTGTTTAGTGAGTCG+GGG | 0.632837 | 1.3:+78164441 | MS.gene49425:CDS |
| GACACCCTGCATTCTCCACA+CGG | 0.638693 | 1.3:-78164191 | None:intergenic |
| ACACCGGCACTGCCGTGACG+AGG | 0.644153 | 1.3:+78164664 | MS.gene49425:CDS |
| GGACGAGAATCGGTGCCTGT+GGG | 0.648473 | 1.3:+78164492 | MS.gene49425:CDS |
| CGGCGTAGGTAACCTCGTCA+CGG | 0.668982 | 1.3:-78164676 | None:intergenic |
| CAATTAGGTGGTCAGACTGG+CGG | 0.669034 | 1.3:+78164411 | MS.gene49425:CDS |
| AGGAACTGTGATCCGAAACG+TGG | 0.669373 | 1.3:+78164299 | MS.gene49425:CDS |
| GGGTGTGGGCATAGGAACCA+GGG | 0.673291 | 1.3:+78164327 | MS.gene49425:CDS |
| CTCCACACGGCTACATACGG+TGG | 0.673617 | 1.3:-78164178 | None:intergenic |
| TAGCGTCGGGTATGAAACAG+AGG | 0.673926 | 1.3:+78163936 | MS.gene49425:CDS |
| ATGCAGGGTGTCATGAAGGG+AGG | 0.676996 | 1.3:+78164202 | MS.gene49425:CDS |
| TTCCACCGTATGTAGCCGTG+TGG | 0.688346 | 1.3:+78164176 | MS.gene49425:CDS |
| AATTGGCCTACAAAAGACAT+GGG | 0.692119 | 1.3:-78164393 | None:intergenic |
| GTAGCCGTGTGGAGAATGCA+GGG | 0.695428 | 1.3:+78164187 | MS.gene49425:CDS |
| CGTGACGAGGTTACCTACGC+CGG | 0.710425 | 1.3:+78164677 | MS.gene49425:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAATAATCGTACTATAT+AGG | + | chr1.3:78165156-78165175 | MS.gene49425:intron | 20.0% |
| !!! | AACCATATCATTTTATTTCT+CGG | + | chr1.3:78164818-78164837 | MS.gene49425:CDS | 20.0% |
| ! | ACACATGTTATGATTTAAAC+GGG | + | chr1.3:78164775-78164794 | MS.gene49425:CDS | 25.0% |
| ! | ATCATAACATGTGTCAAAAA+TGG | - | chr1.3:78164769-78164788 | None:intergenic | 25.0% |
| ! | ATCGTACTATATAGGATAAA+TGG | + | chr1.3:78165164-78165183 | MS.gene49425:intron | 25.0% |
| ! | GACACATGTTATGATTTAAA+CGG | + | chr1.3:78164774-78164793 | MS.gene49425:CDS | 25.0% |
| ! | GAGAAATAAAATGATATGGT+TGG | - | chr1.3:78164819-78164838 | None:intergenic | 25.0% |
| ! | TTAGTTATTGTTTAGTGAGT+CGG | + | chr1.3:78164439-78164458 | MS.gene49425:CDS | 25.0% |
| !! | TTTTTATTATATCGGGCTTT+CGG | + | chr1.3:78164557-78164576 | MS.gene49425:CDS | 25.0% |
| !!! | ACCATATCATTTTATTTCTC+GGG | + | chr1.3:78164819-78164838 | MS.gene49425:CDS | 25.0% |
| !!! | GTTTTTCGGTTAAATGAATT+GGG | + | chr1.3:78164621-78164640 | MS.gene49425:CDS | 25.0% |
| !!! | TGTTTTTCGGTTAAATGAAT+TGG | + | chr1.3:78164620-78164639 | MS.gene49425:CDS | 25.0% |
| ACCCGAGAAATAAAATGATA+TGG | - | chr1.3:78164823-78164842 | None:intergenic | 30.0% | |
| AGCCCGATATAATAAAAACT+CGG | - | chr1.3:78164555-78164574 | None:intergenic | 30.0% | |
| CACATGACTTAACATACATT+GGG | - | chr1.3:78165017-78165036 | None:intergenic | 30.0% | |
| TAGTTATTGTTTAGTGAGTC+GGG | + | chr1.3:78164440-78164459 | MS.gene49425:CDS | 30.0% | |
| TATTTCGTAAGAATAGGAGT+TGG | + | chr1.3:78164006-78164025 | MS.gene49425:CDS | 30.0% | |
| TCACATGACTTAACATACAT+TGG | - | chr1.3:78165018-78165037 | None:intergenic | 30.0% | |
| ! | CTATATCGGAAGATGTTTTT+CGG | + | chr1.3:78164607-78164626 | MS.gene49425:CDS | 30.0% |
| ! | CTCCGAGTTTTTATTATATC+GGG | + | chr1.3:78164550-78164569 | MS.gene49425:CDS | 30.0% |
| ! | GCTCCGAGTTTTTATTATAT+CGG | + | chr1.3:78164549-78164568 | MS.gene49425:CDS | 30.0% |
| ! | TTTTATTATATCGGGCTTTC+GGG | + | chr1.3:78164558-78164577 | MS.gene49425:CDS | 30.0% |
| !! | ATATCATTTTATTTCTCGGG+TGG | + | chr1.3:78164822-78164841 | MS.gene49425:CDS | 30.0% |
| !! | CTTGACATATATTAGCTTTG+AGG | - | chr1.3:78165076-78165095 | None:intergenic | 30.0% |
| !! | TATCATTTTATTTCTCGGGT+GGG | + | chr1.3:78164823-78164842 | MS.gene49425:CDS | 30.0% |
| !!! | ATAACCACGTATTGGTTTTT+TGG | - | chr1.3:78164039-78164058 | None:intergenic | 30.0% |
| AAATTTCAATCCCTTCTTGC+TGG | - | chr1.3:78164959-78164978 | None:intergenic | 35.0% | |
| AGAAGGGATTGAAATTTCAG+TGG | + | chr1.3:78164962-78164981 | MS.gene49425:CDS | 35.0% | |
| AGTTATTGTTTAGTGAGTCG+GGG | + | chr1.3:78164441-78164460 | MS.gene49425:CDS | 35.0% | |
| CGAAAAACATCTTCCGATAT+AGG | - | chr1.3:78164609-78164628 | None:intergenic | 35.0% | |
| GTATGTTAAGTCATGTGAGT+TGG | + | chr1.3:78165020-78165039 | MS.gene49425:intron | 35.0% | |
| TAGGAACTTCTTAATTCCAG+TGG | + | chr1.3:78164866-78164885 | MS.gene49425:CDS | 35.0% | |
| TTAATTCCAGTGGATAGTGT+GGG | + | chr1.3:78164876-78164895 | MS.gene49425:CDS | 35.0% | |
| ! | AATGGATACTCCTGATGTTT+TGG | - | chr1.3:78164751-78164770 | None:intergenic | 35.0% |
| ! | AATTGGCCTACAAAAGACAT+GGG | - | chr1.3:78164396-78164415 | None:intergenic | 35.0% |
| ! | ATGGATACTCCTGATGTTTT+GGG | - | chr1.3:78164750-78164769 | None:intergenic | 35.0% |
| ! | ATGTCTTTTGTAGGCCAATT+AGG | + | chr1.3:78164396-78164415 | MS.gene49425:CDS | 35.0% |
| ! | CCAATACGTGGTTATTGATT+CGG | + | chr1.3:78164044-78164063 | MS.gene49425:CDS | 35.0% |
| ! | TAATTGGCCTACAAAAGACA+TGG | - | chr1.3:78164397-78164416 | None:intergenic | 35.0% |
| ! | TGATTTAAACGGGTTTGTGA+CGG | + | chr1.3:78164785-78164804 | MS.gene49425:CDS | 35.0% |
| !! | CAATACGTGGTTATTGATTC+GGG | + | chr1.3:78164045-78164064 | MS.gene49425:CDS | 35.0% |
| !! | GGAGAGTATTTCGTAAGAAT+AGG | + | chr1.3:78164000-78164019 | MS.gene49425:CDS | 35.0% |
| ACAAACCTACCCAAAACATC+AGG | + | chr1.3:78164738-78164757 | MS.gene49425:CDS | 40.0% | |
| ATAGGAAACATCCAGCAAGA+AGG | + | chr1.3:78164945-78164964 | MS.gene49425:CDS | 40.0% | |
| ATGAGGTTTCTTATGGGGAT+GGG | + | chr1.3:78164232-78164251 | MS.gene49425:CDS | 40.0% | |
| ATGGAAAGTCCTGAAGAAGA+AGG | - | chr1.3:78164924-78164943 | None:intergenic | 40.0% | |
| ATTCGGGCAGTGACATTATT+TGG | + | chr1.3:78164061-78164080 | MS.gene49425:CDS | 40.0% | |
| ATTTCAGTGGATGGAGCTAA+TGG | + | chr1.3:78164975-78164994 | MS.gene49425:CDS | 40.0% | |
| CCCCATAAGAAACCTCATAA+CGG | - | chr1.3:78164230-78164249 | None:intergenic | 40.0% | |
| CCGAATCAATAACCACGTAT+TGG | - | chr1.3:78164047-78164066 | None:intergenic | 40.0% | |
| CCGTTATGAGGTTTCTTATG+GGG | + | chr1.3:78164227-78164246 | MS.gene49425:CDS | 40.0% | |
| CGGTTAAATGAATTGGGTGA+GGG | + | chr1.3:78164627-78164646 | MS.gene49425:CDS | 40.0% | |
| CTTAATTCCAGTGGATAGTG+TGG | + | chr1.3:78164875-78164894 | MS.gene49425:CDS | 40.0% | |
| GCCGTTATGAGGTTTCTTAT+GGG | + | chr1.3:78164226-78164245 | MS.gene49425:CDS | 40.0% | |
| GCTAGAATTTGGACGAGAAT+CGG | + | chr1.3:78164482-78164501 | MS.gene49425:CDS | 40.0% | |
| GGAATTAAGAAGTTCCTAGC+TGG | - | chr1.3:78164864-78164883 | None:intergenic | 40.0% | |
| GGGATTGAAATTTCAGTGGA+TGG | + | chr1.3:78164966-78164985 | MS.gene49425:CDS | 40.0% | |
| TAAATGAATTGGGTGAGGGA+GGG | + | chr1.3:78164631-78164650 | MS.gene49425:CDS | 40.0% | |
| TAAGAAGTTCCTAGCTGGAA+GGG | - | chr1.3:78164859-78164878 | None:intergenic | 40.0% | |
| TAGGAAACATCCAGCAAGAA+GGG | + | chr1.3:78164946-78164965 | MS.gene49425:CDS | 40.0% | |
| TATGAGGTTTCTTATGGGGA+TGG | + | chr1.3:78164231-78164250 | MS.gene49425:CDS | 40.0% | |
| TCCACCAAAAAACCAATACG+TGG | + | chr1.3:78164032-78164051 | MS.gene49425:CDS | 40.0% | |
| TCCCAATGTAACAGTCTCAA+GGG | - | chr1.3:78164280-78164299 | None:intergenic | 40.0% | |
| TCGGTTAAATGAATTGGGTG+AGG | + | chr1.3:78164626-78164645 | MS.gene49425:CDS | 40.0% | |
| TCTTCAGGACTTTCCATCAT+AGG | + | chr1.3:78164927-78164946 | MS.gene49425:CDS | 40.0% | |
| TGCCGTTATGAGGTTTCTTA+TGG | + | chr1.3:78164225-78164244 | MS.gene49425:CDS | 40.0% | |
| TGGTGATAACATTGGGTACA+TGG | - | chr1.3:78164099-78164118 | None:intergenic | 40.0% | |
| TTAAATGAATTGGGTGAGGG+AGG | + | chr1.3:78164630-78164649 | MS.gene49425:CDS | 40.0% | |
| TTAAGAAGTTCCTAGCTGGA+AGG | - | chr1.3:78164860-78164879 | None:intergenic | 40.0% | |
| TTCGGGCAGTGACATTATTT+GGG | + | chr1.3:78164062-78164081 | MS.gene49425:CDS | 40.0% | |
| TTGCTGGATGTTTCCTATGA+TGG | - | chr1.3:78164943-78164962 | None:intergenic | 40.0% | |
| TTTCAGTGGATGGAGCTAAT+GGG | + | chr1.3:78164976-78164995 | MS.gene49425:CDS | 40.0% | |
| TTTCCCTGATTCATAACCCA+CGG | + | chr1.3:78164526-78164545 | MS.gene49425:CDS | 40.0% | |
| ! | GATGGAGCTAATGGGTATAT+GGG | + | chr1.3:78164984-78165003 | MS.gene49425:CDS | 40.0% |
| ! | GCTAATGGGTATATGGGATT+TGG | + | chr1.3:78164990-78165009 | MS.gene49425:CDS | 40.0% |
| ! | TCTTTTGTAGGCCAATTAGG+TGG | + | chr1.3:78164399-78164418 | MS.gene49425:CDS | 40.0% |
| !! | ATACTCCTGATGTTTTGGGT+AGG | - | chr1.3:78164746-78164765 | None:intergenic | 40.0% |
| !! | GTCGGATTGGTGATAACATT+GGG | - | chr1.3:78164106-78164125 | None:intergenic | 40.0% |
| !! | GTTGGATTTTAGAAGCTCGT+CGG | + | chr1.3:78165038-78165057 | MS.gene49425:intron | 40.0% |
| !! | TTGGATTTTAGAAGCTCGTC+GGG | + | chr1.3:78165039-78165058 | MS.gene49425:intron | 40.0% |
| !!! | ACCACGTATTGGTTTTTTGG+TGG | - | chr1.3:78164036-78164055 | None:intergenic | 40.0% |
| AAAGTTCCCACACTATCCAC+TGG | - | chr1.3:78164885-78164904 | None:intergenic | 45.0% | |
| AAATGAATTGGGTGAGGGAG+GGG | + | chr1.3:78164632-78164651 | MS.gene49425:CDS | 45.0% | |
| AATAAAAACTCGGAGCCCGT+GGG | - | chr1.3:78164545-78164564 | None:intergenic | 45.0% | |
| AGGAACCAGGGTATGTTTGT+TGG | + | chr1.3:78164339-78164358 | MS.gene49425:CDS | 45.0% | |
| ATGTTATCACCAATCCGACC+CGG | + | chr1.3:78164107-78164126 | MS.gene49425:CDS | 45.0% | |
| ATTCTCCACACGGCTACATA+CGG | - | chr1.3:78164184-78164203 | None:intergenic | 45.0% | |
| ATTGGGTACATGGTTGACAC+TGG | - | chr1.3:78164089-78164108 | None:intergenic | 45.0% | |
| CATAAGATGAAGAATCCCCC+GGG | - | chr1.3:78164140-78164159 | None:intergenic | 45.0% | |
| CTAGCTGGAAGGGTCAATAT+AGG | - | chr1.3:78164849-78164868 | None:intergenic | 45.0% | |
| CTATATTGACCCTTCCAGCT+AGG | + | chr1.3:78164847-78164866 | MS.gene49425:CDS | 45.0% | |
| CTCCCAATGTAACAGTCTCA+AGG | - | chr1.3:78164281-78164300 | None:intergenic | 45.0% | |
| CTTGAGACTGTTACATTGGG+AGG | + | chr1.3:78164279-78164298 | MS.gene49425:CDS | 45.0% | |
| GCATAAGATGAAGAATCCCC+CGG | - | chr1.3:78164141-78164160 | None:intergenic | 45.0% | |
| GCATTTGCTCCTTCTTCTTC+AGG | + | chr1.3:78164912-78164931 | MS.gene49425:CDS | 45.0% | |
| GCCCTTGAGACTGTTACATT+GGG | + | chr1.3:78164276-78164295 | MS.gene49425:CDS | 45.0% | |
| GGCAAGTGTCCCTTTAGTAT+AGG | - | chr1.3:78164259-78164278 | None:intergenic | 45.0% | |
| GGGATGGGTCCTATACTAAA+GGG | + | chr1.3:78164247-78164266 | MS.gene49425:CDS | 45.0% | |
| GGGGATTCTTCATCTTATGC+TGG | + | chr1.3:78164141-78164160 | MS.gene49425:CDS | 45.0% | |
| GGGTATGAAACAGAGGAGTT+CGG | + | chr1.3:78163943-78163962 | MS.gene49425:CDS | 45.0% | |
| GGTATGAAACAGAGGAGTTC+GGG | + | chr1.3:78163944-78163963 | MS.gene49425:CDS | 45.0% | |
| TAATAAAAACTCGGAGCCCG+TGG | - | chr1.3:78164546-78164565 | None:intergenic | 45.0% | |
| TCATCTGGGTCGCTAGAATT+TGG | + | chr1.3:78164471-78164490 | MS.gene49425:CDS | 45.0% | |
| TCCCGAAATGCATTGTAAGC+CGG | - | chr1.3:78164699-78164718 | None:intergenic | 45.0% | |
| TCTTATGCTGGTGTGTCTTG+CGG | + | chr1.3:78164153-78164172 | MS.gene49425:CDS | 45.0% | |
| TGCCCTTGAGACTGTTACAT+TGG | + | chr1.3:78164275-78164294 | MS.gene49425:CDS | 45.0% | |
| TTCCCTGATTCATAACCCAC+GGG | + | chr1.3:78164527-78164546 | MS.gene49425:CDS | 45.0% | |
| ! | AGAATGCAGGGTGTCATGAA+GGG | + | chr1.3:78164199-78164218 | MS.gene49425:CDS | 45.0% |
| ! | GGATGGAGCTAATGGGTATA+TGG | + | chr1.3:78164983-78165002 | MS.gene49425:CDS | 45.0% |
| ! | GTATGTTTGTTGGAGCAGCT+GGG | + | chr1.3:78164349-78164368 | MS.gene49425:CDS | 45.0% |
| ! | TAAACGGGTTTGTGACGGTT+CGG | + | chr1.3:78164790-78164809 | MS.gene49425:CDS | 45.0% |
| !! | GGTCGGATTGGTGATAACAT+TGG | - | chr1.3:78164107-78164126 | None:intergenic | 45.0% |
| !! | TGGATTTTAGAAGCTCGTCG+GGG | + | chr1.3:78165040-78165059 | MS.gene49425:intron | 45.0% |
| AATCCCCCGGGTTAAAAACC+GGG | - | chr1.3:78164128-78164147 | None:intergenic | 50.0% | |
| AATGCATTGTAAGCCGGCGT+AGG | - | chr1.3:78164693-78164712 | None:intergenic | 50.0% | |
| AGGAACTGTGATCCGAAACG+TGG | + | chr1.3:78164299-78164318 | MS.gene49425:CDS | 50.0% | |
| CAATTAGGTGGTCAGACTGG+CGG | + | chr1.3:78164411-78164430 | MS.gene49425:CDS | 50.0% | |
| CTGCTCCAACAAACATACCC+TGG | - | chr1.3:78164347-78164366 | None:intergenic | 50.0% | |
| GAATCCCCCGGGTTAAAAAC+CGG | - | chr1.3:78164129-78164148 | None:intergenic | 50.0% | |
| GGGGATGGGTCCTATACTAA+AGG | + | chr1.3:78164246-78164265 | MS.gene49425:CDS | 50.0% | |
| GGGGTTGAGGGTTCCTATAT+CGG | + | chr1.3:78164593-78164612 | MS.gene49425:CDS | 50.0% | |
| GGTTAAAAACCGGGTCGGAT+TGG | - | chr1.3:78164119-78164138 | None:intergenic | 50.0% | |
| GGTTGTTGGGTCTTGGAAGT+GGG | + | chr1.3:78164370-78164389 | MS.gene49425:CDS | 50.0% | |
| GTGATCCGAAACGTGGCTAT+CGG | + | chr1.3:78164306-78164325 | MS.gene49425:CDS | 50.0% | |
| TGAAACAGAGGAGTTCGGGT+CGG | + | chr1.3:78163948-78163967 | MS.gene49425:CDS | 50.0% | |
| TGATCCGAAACGTGGCTATC+GGG | + | chr1.3:78164307-78164326 | MS.gene49425:CDS | 50.0% | |
| TGTTTCATACCCGACGCTAC+CGG | - | chr1.3:78163935-78163954 | None:intergenic | 50.0% | |
| ! | AAACGGGTTTGTGACGGTTC+GGG | + | chr1.3:78164791-78164810 | MS.gene49425:CDS | 50.0% |
| ! | AGCCCGTGGGTTATGAATCA+GGG | - | chr1.3:78164532-78164551 | None:intergenic | 50.0% |
| ! | AGTGGGCCCATGTCTTTTGT+AGG | + | chr1.3:78164387-78164406 | MS.gene49425:CDS | 50.0% |
| ! | ATCCGACCCGGTTTTTAACC+CGG | + | chr1.3:78164119-78164138 | MS.gene49425:CDS | 50.0% |
| ! | GAGAATGCAGGGTGTCATGA+AGG | + | chr1.3:78164198-78164217 | MS.gene49425:CDS | 50.0% |
| ! | GCCGGCTTACAATGCATTTC+GGG | + | chr1.3:78164695-78164714 | MS.gene49425:CDS | 50.0% |
| ! | GGTATGTTTGTTGGAGCAGC+TGG | + | chr1.3:78164348-78164367 | MS.gene49425:CDS | 50.0% |
| ! | TAGCGTCGGGTATGAAACAG+AGG | + | chr1.3:78163936-78163955 | MS.gene49425:CDS | 50.0% |
| ! | TATATCGGGCTTTCGGGTCT+TGG | + | chr1.3:78164564-78164583 | MS.gene49425:CDS | 50.0% |
| !! | CGCCGGCTTACAATGCATTT+CGG | + | chr1.3:78164694-78164713 | MS.gene49425:CDS | 50.0% |
| CACACCCGATAGCCACGTTT+CGG | - | chr1.3:78164314-78164333 | None:intergenic | 55.0% | |
| CGCCAGTCTGACCACCTAAT+TGG | - | chr1.3:78164413-78164432 | None:intergenic | 55.0% | |
| GAAACAGAGGAGTTCGGGTC+GGG | + | chr1.3:78163949-78163968 | MS.gene49425:CDS | 55.0% | |
| GAAACGTGGCTATCGGGTGT+GGG | + | chr1.3:78164313-78164332 | MS.gene49425:CDS | 55.0% | |
| GACACCCTGCATTCTCCACA+CGG | - | chr1.3:78164194-78164213 | None:intergenic | 55.0% | |
| GGCCAATTAGGTGGTCAGAC+TGG | + | chr1.3:78164408-78164427 | MS.gene49425:CDS | 55.0% | |
| GGGTTGTTGGGTCTTGGAAG+TGG | + | chr1.3:78164369-78164388 | MS.gene49425:CDS | 55.0% | |
| GTAGCCGTGTGGAGAATGCA+GGG | + | chr1.3:78164187-78164206 | MS.gene49425:CDS | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+GGG | + | chr1.3:78164357-78164376 | MS.gene49425:CDS | 55.0% | |
| TCGGGTATGGAGCAAGGAAG+TGG | + | chr1.3:78163979-78163998 | MS.gene49425:CDS | 55.0% | |
| TCTTGGAGTTGGGGGGTTGA+GGG | + | chr1.3:78164581-78164600 | MS.gene49425:CDS | 55.0% | |
| TGTAGCCGTGTGGAGAATGC+AGG | + | chr1.3:78164186-78164205 | MS.gene49425:CDS | 55.0% | |
| TGTTGGAGCAGCTGGGTTGT+TGG | + | chr1.3:78164356-78164375 | MS.gene49425:CDS | 55.0% | |
| TTCCACCGTATGTAGCCGTG+TGG | + | chr1.3:78164176-78164195 | MS.gene49425:CDS | 55.0% | |
| ! | ATGCAGGGTGTCATGAAGGG+AGG | + | chr1.3:78164202-78164221 | MS.gene49425:CDS | 55.0% |
| ! | CTTTCGGGTCTTGGAGTTGG+GGG | + | chr1.3:78164573-78164592 | MS.gene49425:CDS | 55.0% |
| ! | GAGCCCGTGGGTTATGAATC+AGG | - | chr1.3:78164533-78164552 | None:intergenic | 55.0% |
| ! | GCTTTCGGGTCTTGGAGTTG+GGG | + | chr1.3:78164572-78164591 | MS.gene49425:CDS | 55.0% |
| ! | GGCTTTCGGGTCTTGGAGTT+GGG | + | chr1.3:78164571-78164590 | MS.gene49425:CDS | 55.0% |
| ! | GTGGTTTCGGGTATGGAGCA+AGG | + | chr1.3:78163973-78163992 | MS.gene49425:CDS | 55.0% |
| ! | TCCGACCCGGTTTTTAACCC+GGG | + | chr1.3:78164120-78164139 | MS.gene49425:CDS | 55.0% |
| ! | TTTCGGGTCTTGGAGTTGGG+GGG | + | chr1.3:78164574-78164593 | MS.gene49425:CDS | 55.0% |
| !! | AGTCGGGGCACTGAATCATC+TGG | + | chr1.3:78164456-78164475 | MS.gene49425:CDS | 55.0% |
| !! | GTCGGGGCACTGAATCATCT+GGG | + | chr1.3:78164457-78164476 | MS.gene49425:CDS | 55.0% |
| !! | TGAAGGGAGGTGCCGTTATG+AGG | + | chr1.3:78164215-78164234 | MS.gene49425:CDS | 55.0% |
| AAAGGGTCACCGCCGTTGTG+CGG | + | chr1.3:78163902-78163921 | MS.gene49425:CDS | 60.0% | |
| CCCCGGGTTAAAAACCGGGT+CGG | - | chr1.3:78164124-78164143 | None:intergenic | 60.0% | |
| CGAAACGTGGCTATCGGGTG+TGG | + | chr1.3:78164312-78164331 | MS.gene49425:CDS | 60.0% | |
| CGGCGTAGGTAACCTCGTCA+CGG | - | chr1.3:78164679-78164698 | None:intergenic | 60.0% | |
| CGTGACGAGGTTACCTACGC+CGG | + | chr1.3:78164677-78164696 | MS.gene49425:CDS | 60.0% | |
| CTCCACACGGCTACATACGG+TGG | - | chr1.3:78164181-78164200 | None:intergenic | 60.0% | |
| GCAGCTGGGTTGTTGGGTCT+TGG | + | chr1.3:78164363-78164382 | MS.gene49425:CDS | 60.0% | |
| GGGTGTGGGCATAGGAACCA+GGG | + | chr1.3:78164327-78164346 | MS.gene49425:CDS | 60.0% | |
| GTCTTGGAGTTGGGGGGTTG+AGG | + | chr1.3:78164580-78164599 | MS.gene49425:CDS | 60.0% | |
| GTTCGGGTCGGGTGTGGTTT+CGG | + | chr1.3:78163960-78163979 | MS.gene49425:CDS | 60.0% | |
| TAACCTCGTCACGGCAGTGC+CGG | - | chr1.3:78164670-78164689 | None:intergenic | 60.0% | |
| TGAATTGGGTGAGGGAGGGG+TGG | + | chr1.3:78164635-78164654 | MS.gene49425:CDS | 60.0% | |
| TGGCTATCGGGTGTGGGCAT+AGG | + | chr1.3:78164319-78164338 | MS.gene49425:CDS | 60.0% | |
| TTCGGGTCGGGTGTGGTTTC+GGG | + | chr1.3:78163961-78163980 | MS.gene49425:CDS | 60.0% | |
| ! | CCGACCCGGTTTTTAACCCG+GGG | + | chr1.3:78164121-78164140 | MS.gene49425:CDS | 60.0% |
| ! | CGACCCGGTTTTTAACCCGG+GGG | + | chr1.3:78164122-78164141 | MS.gene49425:CDS | 60.0% |
| ! | GAAACCCACGAAGCACCCAC+AGG | - | chr1.3:78164510-78164529 | None:intergenic | 60.0% |
| ! | GGACGAGAATCGGTGCCTGT+GGG | + | chr1.3:78164492-78164511 | MS.gene49425:CDS | 60.0% |
| ! | GGGCTTTCGGGTCTTGGAGT+TGG | + | chr1.3:78164570-78164589 | MS.gene49425:CDS | 60.0% |
| ! | GTCGGGTGTGGTTTCGGGTA+TGG | + | chr1.3:78163966-78163985 | MS.gene49425:CDS | 60.0% |
| ! | TGGACGAGAATCGGTGCCTG+TGG | + | chr1.3:78164491-78164510 | MS.gene49425:CDS | 60.0% |
| ACCGGCGATTCGCCGCACAA+CGG | - | chr1.3:78163917-78163936 | None:intergenic | 65.0% | |
| AGAGGAGTTCGGGTCGGGTG+TGG | + | chr1.3:78163954-78163973 | MS.gene49425:CDS | 65.0% | |
| CGGGTGTGGGCATAGGAACC+AGG | + | chr1.3:78164326-78164345 | MS.gene49425:CDS | 65.0% | |
| GGAGGGGTGGTCATGGACAC+CGG | + | chr1.3:78164648-78164667 | MS.gene49425:CDS | 65.0% | |
| GGTGCCTGTGGGTGCTTCGT+GGG | + | chr1.3:78164503-78164522 | MS.gene49425:CDS | 65.0% | |
| ACACCGGCACTGCCGTGACG+AGG | + | chr1.3:78164664-78164683 | MS.gene49425:CDS | 70.0% | |
| CGGCGAATCGCCGGTAGCGT+CGG | + | chr1.3:78163922-78163941 | MS.gene49425:CDS | 70.0% | |
| CGGTGCCTGTGGGTGCTTCG+TGG | + | chr1.3:78164502-78164521 | MS.gene49425:CDS | 70.0% | |
| GCCGTTGTGCGGCGAATCGC+CGG | + | chr1.3:78163913-78163932 | MS.gene49425:CDS | 70.0% | |
| GGCGAATCGCCGGTAGCGTC+GGG | + | chr1.3:78163923-78163942 | MS.gene49425:CDS | 70.0% | |
| GGCGATTCGCCGCACAACGG+CGG | - | chr1.3:78163914-78163933 | None:intergenic | 70.0% | |
| GGGTGAGGGAGGGGTGGTCA+TGG | + | chr1.3:78164641-78164660 | MS.gene49425:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 78163886 | 78165198 | 78163886 | ID=MS.gene49425 |
| chr1.3 | mRNA | 78163886 | 78165198 | 78163886 | ID=MS.gene49425.t1;Parent=MS.gene49425 |
| chr1.3 | exon | 78163886 | 78165019 | 78163886 | ID=MS.gene49425.t1.exon1;Parent=MS.gene49425.t1 |
| chr1.3 | CDS | 78163886 | 78165019 | 78163886 | ID=cds.MS.gene49425.t1;Parent=MS.gene49425.t1 |
| chr1.3 | exon | 78165178 | 78165198 | 78165178 | ID=MS.gene49425.t1.exon2;Parent=MS.gene49425.t1 |
| chr1.3 | CDS | 78165178 | 78165198 | 78165178 | ID=cds.MS.gene49425.t1;Parent=MS.gene49425.t1 |
| Gene Sequence |
| Protein sequence |
